FvH4_3g21390

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000053
Physical Location & Seq
Forward (+)
14466259 .. 14470079
3821 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g21390.t4

Sequence Viewer

Length: 1536 bp
ATGGAACAGCAAATCGCCAAATTAAAAGTATTGGTGAGGGAACTTTTGACATCAACTGCAGCTGGTTTATCCCATCAGCTGAAATTCATTGATGACATCCAGCGCTTAGGAGTGTCATACCATTTTGAAACAGAATTAGCAGAAGCGCTGGAAAATATTCATGCCCGACTACATGATGGTGATCTAGACCTATACAATGAGTCTCTTCGTTTTCGTCTATTAAGACAACATGGATATAATATCTCATCTGGAGATATATTCAAGAAATTCAAAGATGCAAATGGCAATTTCAAGGAGAGCTTAATTGCTGATGTTCCGGGGATGCTAAGCTTGTATGAAGCAACGCATCTTAGGGTTCATGGAGAAGAAATATTAGAAGAGGCTCTTGTTTTCACCACCAATCACCTTGAGTTGGCGATGAGCCAAGTAAGCTATCCACTAAAAGCACAAATATCTGCAGCCCTAGAAAGACCTTTGCGGAGAAGTCTAGAGAGACTGTCGGTCAGGAATTACATAACAATCTACCAAGCCACGACTTCGCATAATGAAGCATTACTGAAACTCGTAAAGCTAGATTTCAATCTGCTGCAATCTTTACACAAAGAGGAGCTTAGTGAGGTTACCAGGTGGTGGAAGGAGCAAGATTATGAAAGGAAGATCCCTTTTGCAAGGCATAGGATTGTGGAGTGTTTCTTTTGGATGGTGGGAATGTATTATGAACCTCAATACTCGGCTGCGAGAAAGATTGGATCAAAATTATGCACTTTTGCTACAATGTTGGATGATGTCTACGATTCATATGGGGGCACAGTCGAAGAACTCAAGATATTTCGTGCAGCAATGGACAGGTGGGACGTCAACTGTTGCATGGATGGTCTACCACCATACATGATAGGATTTTATCATTCACTTCTGGATATGATGAATGCGATTGAAGAAGAGCTGGAAAAGCAAGGACTATCATACCGAGTCCAATATGCAAAACAAGTTCTGAAAAATCAAGCCAGAGACTACCTCGTTGAGGCCAAATGGCTCCAGGAAGAATGTACCCCAAGCATGGAGGAGTATATGCCTGTGAGAACACGTTCTGCTGGTTCTTGTATGACTATAGTGCTATCTTTACTTGGAATGAACGATAATATTCCCAAGGAAACATTTGAGTGGATTCTGAAGTACCCTAAAATTATTAGGGCTGCGAGCCTCATTTTCAGGCTCATGGATGACATTGAGGGGTGCAAGAGTGAGAAAGAACAAGGGGATGTTGCTTCTAGTATTGATTGCTACATGAAGCAATATAGGGTCTCAGAGGAAGAGGCAATTGATGTGTTTAACAAACAAATCGTGGAAGCATGGAAGGATATAAATGAAGATTTACTTCAACCAATTGCTAAGCCAATGTATGTGCTAAAGCGCGCTCTTAATTTCACAAGAAACGTTGATGTGGTCTACAAAGGAGAAGATGGCTTTAAATATGTTGGGAAAGTAGTAAAACAAGGTGTCGCTGCACTTTTCGTTGATCCCTTGCCACTCGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

512

Amino Acids

59.16

Weight (kDa)

5.5

Isoelectric Point (pI)

49.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 43 - 201 3.6e-52 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 258 - 378 1.9e-38 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 298 - 378 6.2e-12 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 858
AccB7I CCANNNNNTGG 1 cut(s) 630
AccI GTMKAC 3 cut(s) 789, 877, 1446
AccII CGCG 1 cut(s) 1413
AciI CCGC 1 cut(s) 478
AclI AACGTT 1 cut(s) 1434
AclWI GGATC 3 cut(s) 652, 757, 1511
AcsI RAATTY 2 cut(s) 83, 266
AcuI CTGAAG 1 cut(s) 1190
AcyI GRCGYC 1 cut(s) 855
AfaI GTAC 2 cut(s) 1048, 1175
AfeI AGCGCT 2 cut(s) 104, 147
AfiI CCNNNNNNNGG 4 cut(s) 412, 630, 1021, 1057
AflIII ACRYGT 1 cut(s) 1082
AgsI TTSAA 7 cut(s) 128, 262, 271, 292, 580, 935, 1379
AhdI GACNNNNNGTC 1 cut(s) 500
AjnI CCWGG 2 cut(s) 623, 1035
AluBI AGCT 8 cut(s) 62, 79, 300, 330, 432, 571, 610, 943
AluI AGCT 8 cut(s) 62, 79, 300, 330, 432, 571, 610, 943
Alw26I GTCTC 4 cut(s) 207, 487, 1002, 1306
AlwI GGATC 3 cut(s) 652, 757, 1511
Aor51HI AGCGCT 2 cut(s) 104, 147
AoxI GGCC 1 cut(s) 1023
ApeKI GCWGC 7 cut(s) 59, 458, 586, 734, 836, 1193, 1502
ApoI RAATTY 2 cut(s) 83, 266
Asp700I GAANNNNTTC 2 cut(s) 156, 1084
AspLEI GCGC 4 cut(s) 105, 148, 1413, 1415
AsuC2I CCSGG 1 cut(s) 318
AsuHPI GGTGA 4 cut(s) 46, 191, 385, 395
BaeGI GKGCMC 1 cut(s) 809
BbvI GCAGC 7 cut(s) 71, 470, 573, 721, 848, 1180, 1489
BccI CCATC 5 cut(s) 81, 170, 694, 866, 1454
BciT130I CCWGG 2 cut(s) 625, 1037
BcnI CCSGG 1 cut(s) 318
BcoDI GTCTC 4 cut(s) 207, 487, 1002, 1306
BfaI CTAG 5 cut(s) 185, 464, 488, 572, 1269
BfmI CTRYAG 3 cut(s) 57, 456, 1107
BfoI RGCGCY 2 cut(s) 106, 149
BisI GCNGC 7 cut(s) 60, 459, 587, 735, 837, 1194, 1503
BlpI GCTNAGC 2 cut(s) 326, 1389
BlsI GCNGC 7 cut(s) 61, 460, 588, 736, 838, 1195, 1504
Bme1390I CCNGG 3 cut(s) 318, 625, 1037
BmeRI GACNNNNNGTC 1 cut(s) 500
BmiI GGNNCC 1 cut(s) 1034
BmrFI CCNGG 3 cut(s) 318, 625, 1037
BmsI GCATC 3 cut(s) 265, 312, 355
BplI GAGNNNNNCTC 2 cut(s) 999, 1031
BpmI CTGGAG 2 cut(s) 270, 1019
Bpu10I CCTNAGC 1 cut(s) 106
Bpu1102I GCTNAGC 2 cut(s) 326, 1389
BpuEI CTTGAG 2 cut(s) 428, 806
BpuMI CCSGG 1 cut(s) 318
BsaBI GATNNNNATC 2 cut(s) 180, 579
BsaHI GRCGYC 1 cut(s) 855
BsaI GGTCTC 1 cut(s) 1306
BsaJI CCNNGG 2 cut(s) 317, 1146
Bsc4I CCNNNNNNNGG 4 cut(s) 412, 630, 1021, 1057
Bse3DI GCAATG 1 cut(s) 846
Bse8I GATNNNNATC 2 cut(s) 180, 579
BseBI CCWGG 2 cut(s) 625, 1037
BseDI CCNNGG 2 cut(s) 317, 1146
BseGI GGATG 7 cut(s) 96, 327, 705, 787, 877, 1225, 1264
BseJI GATNNNNATC 2 cut(s) 180, 579
BseLI CCNNNNNNNGG 4 cut(s) 412, 630, 1021, 1057
BseMI GCAATG 1 cut(s) 846
BseMII CTCAG 1 cut(s) 1317
BsePI GCGCGC 1 cut(s) 1411
BseRI GAGGAG 2 cut(s) 620, 1076
BseSI GKGCMC 1 cut(s) 809
BseXI GCAGC 7 cut(s) 71, 470, 573, 721, 848, 1180, 1489
BsgI GTGCAG 2 cut(s) 855, 1488
Bsh1236I CGCG 1 cut(s) 1413
BshFI GGCC 1 cut(s) 1025
BsiSI CCGG 1 cut(s) 317
BslFI GGGAC 1 cut(s) 866
BslI CCNNNNNNNGG 4 cut(s) 412, 630, 1021, 1057
BsmAI GTCTC 4 cut(s) 207, 487, 1002, 1306
BsmFI GGGAC 1 cut(s) 866
BsmI GAATGC 1 cut(s) 931
BsnI GGCC 1 cut(s) 1025
Bso31I GGTCTC 1 cut(s) 1306
Bsp1286I GDGCHC 1 cut(s) 809
Bsp143I GATC 4 cut(s) 181, 657, 749, 1516
Bsp1720I GCTNAGC 2 cut(s) 326, 1389
BspACI CCGC 1 cut(s) 478
BspANI GGCC 1 cut(s) 1025
BspCNI CTCAG 1 cut(s) 1316
BspFNI CGCG 1 cut(s) 1413
BspLI GGNNCC 1 cut(s) 1034
BspMAI CTGCAG 2 cut(s) 61, 460
BspPI GGATC 3 cut(s) 652, 757, 1511
BspQI GCTCTTC 1 cut(s) 933
BspTNI GGTCTC 1 cut(s) 1306
BsrDI GCAATG 1 cut(s) 846
BssECI CCNNGG 2 cut(s) 317, 1146
BssHII GCGCGC 1 cut(s) 1411
BssMI GATC 4 cut(s) 181, 657, 749, 1516
BssNI GRCGYC 1 cut(s) 855
BssT1I CCWWGG 1 cut(s) 1146
Bst2UI CCWGG 2 cut(s) 625, 1037
Bst4CI ACNGT 3 cut(s) 498, 811, 863
Bst6I CTCTTC 4 cut(s) 210, 372, 933, 1305
BstACI GRCGYC 1 cut(s) 855
BstC8I GCNNGC 2 cut(s) 1198, 1413
BstDEI CTNAG 6 cut(s) 106, 326, 350, 611, 1303, 1389
BstEII GGTNACC 1 cut(s) 619
BstENI CCTNNNNNAGG 1 cut(s) 1019
BstF5I GGATG 7 cut(s) 96, 327, 705, 787, 877, 1225, 1264
BstFNI CGCG 1 cut(s) 1413
BstH2I RGCGCY 2 cut(s) 106, 149
BstHHI GCGC 4 cut(s) 105, 148, 1413, 1415
BstKTI GATC 4 cut(s) 184, 660, 752, 1519
BstMAI GTCTC 4 cut(s) 207, 487, 1002, 1306
BstMBI GATC 4 cut(s) 181, 657, 749, 1516
BstMWI GCNNNNNNNGC 2 cut(s) 429, 949
BstNI CCWGG 2 cut(s) 625, 1037
BstPI GGTNACC 1 cut(s) 619
BstSCI CCNGG 3 cut(s) 316, 623, 1035
BstSFI CTRYAG 3 cut(s) 57, 456, 1107
BstSLI GKGCMC 1 cut(s) 809
BstUI CGCG 1 cut(s) 1413
BstV1I GCAGC 7 cut(s) 71, 470, 573, 721, 848, 1180, 1489
BstX2I RGATCY 1 cut(s) 657
BstYI RGATCY 1 cut(s) 657
BsuRI GGCC 1 cut(s) 1025
BtgZI GCGATG 1 cut(s) 431
BtsCI GGATG 7 cut(s) 96, 327, 705, 787, 877, 1225, 1264
Cac8I GCNNGC 2 cut(s) 1198, 1413
CfoI GCGC 4 cut(s) 105, 148, 1413, 1415
CsiI ACCWGGT 1 cut(s) 623
Csp6I GTAC 2 cut(s) 1047, 1174
CviQI GTAC 2 cut(s) 1047, 1174
DdeI CTNAG 6 cut(s) 106, 326, 350, 611, 1303, 1389
DpnI GATC 4 cut(s) 183, 659, 751, 1518
DpnII GATC 4 cut(s) 181, 657, 749, 1516
DraI TTTAAA 1 cut(s) 1468
DriI GACNNNNNGTC 1 cut(s) 500
Eam1104I CTCTTC 4 cut(s) 210, 372, 933, 1305
Eam1105I GACNNNNNGTC 1 cut(s) 500
EarI CTCTTC 4 cut(s) 210, 372, 933, 1305
Eco130I CCWWGG 1 cut(s) 1146
Eco31I GGTCTC 1 cut(s) 1306
Eco47III AGCGCT 2 cut(s) 104, 147
Eco57I CTGAAG 1 cut(s) 1190
Eco91I GGTNACC 1 cut(s) 619
EcoNI CCTNNNNNAGG 1 cut(s) 1019
EcoO65I GGTNACC 1 cut(s) 619
EcoRII CCWGG 2 cut(s) 623, 1035
EcoT14I CCWWGG 1 cut(s) 1146
ErhI CCWWGG 1 cut(s) 1146
FalI AAGNNNNNCTT 8 cut(s) 284, 316, 369, 401, 594, 626, 1359, 1391
FaqI GGGAC 1 cut(s) 866
FauNDI CATATG 1 cut(s) 799
FblI GTMKAC 3 cut(s) 789, 877, 1446
Fnu4HI GCNGC 7 cut(s) 60, 459, 587, 735, 837, 1194, 1503
FokI GGATG 7 cut(s) 83, 334, 712, 794, 884, 1232, 1271
Fsp4HI GCNGC 7 cut(s) 60, 459, 587, 735, 837, 1194, 1503
FspBI CTAG 5 cut(s) 185, 464, 488, 572, 1269
GlaI GCGC 4 cut(s) 104, 147, 1412, 1414
GluI GCNGC 7 cut(s) 60, 459, 587, 735, 837, 1194, 1503
GsuI CTGGAG 2 cut(s) 270, 1019
HaeII RGCGCY 2 cut(s) 106, 149
HaeIII GGCC 1 cut(s) 1025
HapII CCGG 1 cut(s) 317
HhaI GCGC 4 cut(s) 105, 148, 1413, 1415
Hin1I GRCGYC 1 cut(s) 855
Hin6I GCGC 4 cut(s) 103, 146, 1411, 1413
HinP1I GCGC 4 cut(s) 103, 146, 1411, 1413
HincII GTYRAC 1 cut(s) 859
HindII GTYRAC 1 cut(s) 859
HindIII AAGCTT 1 cut(s) 328
HinfI GANTC 4 cut(s) 200, 794, 969, 1165
HpaII CCGG 1 cut(s) 317
HphI GGTGA 4 cut(s) 46, 191, 385, 395
Hpy166II GTNNAC 4 cut(s) 790, 859, 878, 1447
Hpy188I TCNGA 3 cut(s) 993, 1170, 1306
Hpy188III TCNNGA 7 cut(s) 185, 249, 262, 488, 505, 823, 914
Hpy8I GTNNAC 4 cut(s) 790, 859, 878, 1447
HpyAV CCTTC 2 cut(s) 628, 1348
HpyCH4III ACNGT 3 cut(s) 498, 811, 863
HpyCH4IV ACGT 3 cut(s) 855, 1084, 1434
HpyF10VI GCNNNNNNNGC 2 cut(s) 429, 949
HpyF3I CTNAG 6 cut(s) 106, 326, 350, 611, 1303, 1389
HpySE526I ACGT 3 cut(s) 855, 1084, 1434
Hsp92I GRCGYC 1 cut(s) 855
HspAI GCGC 4 cut(s) 103, 146, 1411, 1413
Kzo9I GATC 4 cut(s) 181, 657, 749, 1516
LguI GCTCTTC 1 cut(s) 933
LmnI GCTCC 3 cut(s) 607, 637, 1038
Lsp1109I GCAGC 7 cut(s) 71, 470, 573, 721, 848, 1180, 1489
LweI GCATC 3 cut(s) 265, 312, 355
MabI ACCWGGT 1 cut(s) 623
MaeI CTAG 5 cut(s) 185, 464, 488, 572, 1269
MaeII ACGT 3 cut(s) 855, 1084, 1434
MaeIII GTNAC 1 cut(s) 619
MalI GATC 4 cut(s) 183, 659, 751, 1518
MboI GATC 4 cut(s) 181, 657, 749, 1516
MfeI CAATTG 2 cut(s) 1317, 1383
MflI RGATCY 1 cut(s) 657
MhlI GDGCHC 1 cut(s) 809
MlyI GAGTC 2 cut(s) 209, 978
MmeI TCCRAC 1 cut(s) 759
MroXI GAANNNNTTC 2 cut(s) 156, 1084
MseI TTAA 6 cut(s) 23, 221, 302, 1329, 1419, 1467
MslI CAYNNNNRTG 3 cut(s) 177, 1159, 1531
MspA1I CMGCKG 2 cut(s) 62, 79
MspI CCGG 1 cut(s) 317
MspR9I CCNGG 3 cut(s) 318, 625, 1037
MunI CAATTG 2 cut(s) 1317, 1383
Mva1269I GAATGC 1 cut(s) 931
MvaI CCWGG 2 cut(s) 625, 1037
MvnI CGCG 1 cut(s) 1413
MwoI GCNNNNNNNGC 2 cut(s) 429, 949
NciI CCSGG 1 cut(s) 318
NdeI CATATG 1 cut(s) 799
NdeII GATC 4 cut(s) 181, 657, 749, 1516
NlaIV GGNNCC 1 cut(s) 1034
NmeAIII GCCGAG 1 cut(s) 710
PauI GCGCGC 1 cut(s) 1411
PciSI GCTCTTC 1 cut(s) 933
PctI GAATGC 1 cut(s) 931
PdmI GAANNNNTTC 2 cut(s) 156, 1084
PfeI GAWTC 2 cut(s) 794, 1165
PflMI CCANNNNNTGG 1 cut(s) 630
PfoI TCCNGGA 1 cut(s) 1035
PkrI GCNGC 7 cut(s) 61, 460, 588, 736, 838, 1195, 1504
PleI GAGTC 2 cut(s) 208, 977
PpsI GAGTC 2 cut(s) 208, 977
Psp1406I AACGTT 1 cut(s) 1434
Psp6I CCWGG 2 cut(s) 623, 1035
PspEI GGTNACC 1 cut(s) 619
PspGI CCWGG 2 cut(s) 623, 1035
PspN4I GGNNCC 1 cut(s) 1034
PstI CTGCAG 2 cut(s) 61, 460
PsuI RGATCY 1 cut(s) 657
PteI GCGCGC 1 cut(s) 1411
PvuII CAGCTG 2 cut(s) 62, 79
RsaI GTAC 2 cut(s) 1048, 1175
RsaNI GTAC 2 cut(s) 1047, 1174
RseI CAYNNNNRTG 3 cut(s) 177, 1159, 1531
SapI GCTCTTC 1 cut(s) 933
SaqAI TTAA 6 cut(s) 23, 221, 302, 1329, 1419, 1467
SatI GCNGC 7 cut(s) 60, 459, 587, 735, 837, 1194, 1503
Sau3AI GATC 4 cut(s) 181, 657, 749, 1516
SchI GAGTC 2 cut(s) 209, 978
ScrFI CCNGG 3 cut(s) 318, 625, 1037
SduI GDGCHC 1 cut(s) 809
SexAI ACCWGGT 1 cut(s) 623
SfaNI GCATC 3 cut(s) 265, 312, 355
SfcI CTRYAG 3 cut(s) 57, 456, 1107
SmiMI CAYNNNNRTG 3 cut(s) 177, 1159, 1531
SmlI CTYRAG 2 cut(s) 407, 821
SmoI CTYRAG 2 cut(s) 407, 821
SsiI CCGC 1 cut(s) 478
SspI AATATT 3 cut(s) 157, 372, 1141
SspMI CTAG 5 cut(s) 185, 464, 488, 572, 1269
StyD4I CCNGG 3 cut(s) 316, 623, 1035
StyI CCWWGG 1 cut(s) 1146
TaaI ACNGT 3 cut(s) 498, 811, 863
TaiI ACGT 3 cut(s) 858, 1087, 1437
TaqI TCGA 2 cut(s) 813, 1530
TaqII GACCGA 1 cut(s) 490
TfiI GAWTC 2 cut(s) 794, 1165
Tru1I TTAA 6 cut(s) 23, 221, 302, 1329, 1419, 1467
Tru9I TTAA 6 cut(s) 23, 221, 302, 1329, 1419, 1467
TseI GCWGC 7 cut(s) 59, 458, 586, 734, 836, 1193, 1502
Van91I CCANNNNNTGG 1 cut(s) 630
XagI CCTNNNNNAGG 1 cut(s) 1019
XapI RAATTY 2 cut(s) 83, 266
XbaI TCTAGA 2 cut(s) 184, 487
XmiI GTMKAC 3 cut(s) 789, 877, 1446
XmnI GAANNNNTTC 2 cut(s) 156, 1084
XspI CTAG 5 cut(s) 185, 464, 488, 572, 1269
ZraI GACGTC 1 cut(s) 856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.