Rorug03G0140800

(-)-alpha-pinene synthase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
11584877 .. 11593048
8172 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0140800.1

Sequence Viewer

Length: 1989 bp
ATGGCCGGCCGCGCTAAACAAAGAGACGGTGAAAGAGAATTATCAAAGAACCCTACTTCATTTGGTGTACCTCTAACAGTCTGCGCAATAATAATGGTCGTTTTTCCACCATTACAACTACTGGATGATTCCAATCATGATGGATTATTATTTGCCGTATCGTCTATGCTGTATCTGTTACTGGATCCTCTGTTTCTGTATGCTCCTCTTATCAACGAGAACGCCAAGTGTCTCGTGTTGGACAACAGAGTGAAGATAGCAGCTCTTTTTTTTCGATCATTGGGAGATGTTCGTTATCTAATCAGAATATATCTTCTCATTAAGGAAGGCTGGGGGAAGTCCCCTTCCCGTAGGAAAATGCTGAGGCTAGCAAGTGACACGGTGTCTATTCTTCCTATTCCTCAAGTTGCAATTTTAATTTTTCTTCCAAAGATGAGGGGCTCCAACTCTTTGAAGACAATGACGTTTCTCAACTCCCTTATTGCATCGCAATATTTTCCACGAATTTACCCCATCTTTGTATTGTTTAAGGAAATTAACACGGCGAGAATTGGTGATAGAAGAGACACGTTCACAAAATGGTCCTCAATTGTCGTCAACAATCCAAAATGGTCGTCAATCGTCGTCAATATGTTTGGGTACATTATTGCCAGCCATATGTTCGGAGCATTTTGGTATTTTTTCTCCATCCAACGAGAGATAGAGTGTTGGGGACATGCTTGCAGAATTGAAGATGGATGTGAATTTAGTACTTCATGTGTTCAAAATACATACAGAAATCTCACACTTTTAGAGAACTCATGCCCTGCAAATCCCCCAAATAAACAAGTATTCGATTTTGGCATATTTCATGATGCTCTACAATCCGGCATGCAAAAATCAACAAATTTTCCACAAAAGTTTTTGCAATGTTTATCGTGGGGCATACGAAATATGAGTTCTTTTGGTTCAAACCTCAGTGCTACCAGTGCAAATGGAGGGGAAAACTTGCTTGTGGTTCTCTTTTCAATATTTGGCTTGGTACTATTTATGTATCTCTTGGGGCATGCGCAGACATTTATGCAGAAAGTTAGCGAATCAGATACTATCCTACAGAAGATGGAAATGACTATAGAACCAAAAATACGATCCATATTATCTGAATATGGCCTGTCTAATGGAATGGAGAGGAAAATCAACCTGGCTGTAAAACAAAATCTTAAAGAAGATGAAAATTATATTGTGGAGAATATGTTTTCAATTCTTTCCTTAAAAGAAGCCAAAAGTTTTGCTGTGGAGATCAAGTGCACTCTCTTTTTGGATAAGCTCAAGAAAGTCGAGGGGCTTAAACATAAGGACGATTTGGTATTGAAAAAAATCTGTGAACATCTTAAGCCAACAATCTATAGTGAGAGCAGTTATATAATTCGGGAAGGGGAGCCACTTGATTTGATGTTCTTCCTCACACAGGGCATCGTACTCATTTATAATTCATGTGGTTCCTCAAGAACTGTCCAAGCTGAGAAAGAGAAAAGTGGTTTGTATGGAAAAGAGCTTTTAATTTGGGCCGAAGAATCTTCTACACATCTGTCCACCTTACCTTTCTCAACCGCAACTATTAAATCCCACAACAAAGTTGAAGTCTTTACTATCAAGGCCACCGATTTACAGCGTGTTGTATCCCAAAATCATCTCAATGTGGATGAACCTATTCTTTCTCTGCAATTTGGCCGACCCGACTCAAACCCTGCGGTCCGACCCGATTACATCTTTCGACTCCGGTCACCTCCAGCGACGAGGCCGGCCCTATTCGACTCAGACAGAAGTCGCCGTCATCCCCATGCCCTTCTTTTCCTCCGGCAACCCCCGCAGACGGTAGATCAAAGCCGAGAAAGCTTGGAGCTTCGAGATCCGACAGGAATTTTCAACTTCGACGACAACAGGGCTTCAAACCGTGCAATATACACGAACGAACCGAATCTGTTGAACCGGAACCATTCGTGTTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

662

Amino Acids

75.32

Weight (kDa)

8.94

Isoelectric Point (pI)

44.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1467, 1987
Acc16I TGCGCA 2 cut(s) 85, 1050
AccII CGCG 1 cut(s) 12
AciI CCGC 4 cut(s) 10, 1590, 1730, 1847
AclWI GGATC 4 cut(s) 179, 192, 1122, 1883
AcoI YGGCCR 3 cut(s) 3, 7, 1708
AcsI RAATTY 4 cut(s) 504, 743, 886, 1899
AfaI GTAC 5 cut(s) 69, 641, 751, 1023, 1458
AfiI CCNNNNNNNGG 2 cut(s) 1447, 1852
AflII CTTAAG 1 cut(s) 1370
AflIII ACRYGT 1 cut(s) 567
AhdI GACNNNNNGTC 1 cut(s) 382
AjnI CCWGG 1 cut(s) 1179
AluBI AGCT 6 cut(s) 263, 1306, 1499, 1534, 1875, 1882
AluI AGCT 6 cut(s) 263, 1306, 1499, 1534, 1875, 1882
Alw21I GWGCWC 1 cut(s) 1289
Alw26I GTCTC 3 cut(s) 18, 236, 558
Alw44I GTGCAC 1 cut(s) 1285
AlwI GGATC 4 cut(s) 179, 192, 1122, 1883
AoxI GGCC 8 cut(s) 3, 7, 1147, 1545, 1635, 1708, 1778, 1782
ApaLI GTGCAC 1 cut(s) 1285
ApeKI GCWGC 1 cut(s) 260
ApoI RAATTY 4 cut(s) 504, 743, 886, 1899
ArsI GACNNNNNNTTYG 4 cut(s) 599, 631, 1605, 1637
Asp700I GAANNNNTTC 1 cut(s) 1689
AspLEI GCGC 3 cut(s) 14, 86, 1051
AspS9I GGNCC 4 cut(s) 582, 1545, 1732, 1783
AsuHPI GGTGA 3 cut(s) 41, 566, 1755
AsuNHI GCTAGC 1 cut(s) 367
AvaII GGWCC 2 cut(s) 582, 1732
BaeGI GKGCMC 1 cut(s) 1289
BamHI GGATCC 1 cut(s) 184
BanII GRGCYC 1 cut(s) 443
BauI CACGAG 1 cut(s) 233
BbsI GAAGAC 1 cut(s) 461
Bbv12I GWGCWC 1 cut(s) 1289
BbvCI CCTCAGC 1 cut(s) 362
BbvI GCAGC 1 cut(s) 272
BccI CCATC 5 cut(s) 134, 521, 695, 728, 1093
BceAI ACGGC 3 cut(s) 140, 558, 1794
BciT130I CCWGG 1 cut(s) 1181
BciVI GTATCC 1 cut(s) 1669
BcoDI GTCTC 3 cut(s) 18, 236, 558
BfaI CTAG 1 cut(s) 368
BfmI CTRYAG 3 cut(s) 1091, 1110, 1384
BfrI CTTAAG 1 cut(s) 1370
BfuI GTATCC 1 cut(s) 1669
BisI GCNGC 2 cut(s) 10, 261
BlsI GCNGC 2 cut(s) 11, 262
BmcAI AGTACT 1 cut(s) 751
Bme1390I CCNGG 1 cut(s) 1181
Bme18I GGWCC 2 cut(s) 582, 1732
BmeRI GACNNNNNGTC 1 cut(s) 382
BmgT120I GGNCC 4 cut(s) 582, 1545, 1732, 1783
BmiI GGNNCC 5 cut(s) 186, 442, 1419, 1480, 1973
BmrFI CCNGG 1 cut(s) 1181
BmsI GCATC 3 cut(s) 494, 844, 1461
BmtI GCTAGC 1 cut(s) 371
BoxI GACNNNNGTC 2 cut(s) 1759, 1803
BpiI GAAGAC 1 cut(s) 461
BpmI CTGGAG 1 cut(s) 1752
Bpu10I CCTNAGC 1 cut(s) 362
BpuEI CTTGAG 3 cut(s) 387, 1292, 1468
BsaBI GATNNNNATC 1 cut(s) 132
BsaWI WCCGGW 2 cut(s) 1758, 1968
BsaXI ACNNNNNCTCC 4 cut(s) 1217, 1247, 1268, 1298
Bsc4I CCNNNNNNNGG 2 cut(s) 1447, 1852
Bse118I RCCGGY 2 cut(s) 5, 1780
Bse1I ACTGG 3 cut(s) 126, 186, 966
Bse3DI GCAATG 1 cut(s) 914
Bse8I GATNNNNATC 1 cut(s) 132
BseBI CCWGG 1 cut(s) 1181
BseGI GGATG 5 cut(s) 130, 687, 743, 1687, 1813
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 2 cut(s) 1447, 1852
BseMI GCAATG 1 cut(s) 914
BseMII CTCAG 4 cut(s) 353, 970, 1491, 1809
BseNI ACTGG 3 cut(s) 126, 186, 966
BseRI GAGGAG 1 cut(s) 195
BseSI GKGCMC 1 cut(s) 1289
BseX3I CGGCCG 1 cut(s) 7
BseXI GCAGC 1 cut(s) 272
BseYI CCCAGC 1 cut(s) 330
Bsh1236I CGCG 1 cut(s) 12
Bsh1285I CGRYCG 1 cut(s) 10
BshFI GGCC 8 cut(s) 5, 9, 1149, 1547, 1637, 1710, 1780, 1784
BsiEI CGRYCG 1 cut(s) 10
BsiHKAI GWGCWC 1 cut(s) 1289
BsiSI CCGG 6 cut(s) 6, 867, 1759, 1781, 1837, 1969
BslFI GGGAC 2 cut(s) 325, 726
BslI CCNNNNNNNGG 2 cut(s) 1447, 1852
BsmAI GTCTC 3 cut(s) 18, 236, 558
BsmBI CGTCTC 1 cut(s) 18
BsmFI GGGAC 2 cut(s) 325, 726
BsnI GGCC 8 cut(s) 5, 9, 1149, 1547, 1637, 1710, 1780, 1784
Bsp1286I GDGCHC 2 cut(s) 443, 1289
Bsp143I GATC 6 cut(s) 184, 275, 1127, 1278, 1858, 1888
BspACI CCGC 4 cut(s) 10, 1590, 1730, 1847
BspANI GGCC 8 cut(s) 5, 9, 1149, 1547, 1637, 1710, 1780, 1784
BspCNI CTCAG 4 cut(s) 354, 969, 1492, 1808
BspFNI CGCG 1 cut(s) 12
BspHI TCATGA 2 cut(s) 136, 850
BspLI GGNNCC 5 cut(s) 186, 442, 1419, 1480, 1973
BspOI GCTAGC 1 cut(s) 371
BspPI GGATC 4 cut(s) 179, 192, 1122, 1883
BspTI CTTAAG 1 cut(s) 1370
BsrDI GCAATG 1 cut(s) 914
BsrFI RCCGGY 2 cut(s) 5, 1780
BsrI ACTGG 3 cut(s) 126, 186, 966
BssAI RCCGGY 2 cut(s) 5, 1780
BssMI GATC 6 cut(s) 184, 275, 1127, 1278, 1858, 1888
BssSI CACGAG 1 cut(s) 233
Bst2BI CACGAG 1 cut(s) 233
Bst2UI CCWGG 1 cut(s) 1181
Bst4CI ACNGT 6 cut(s) 29, 79, 382, 1492, 1855, 1934
Bst6I CTCTTC 1 cut(s) 556
BstAFI CTTAAG 1 cut(s) 1370
BstC8I GCNNGC 7 cut(s) 7, 369, 652, 721, 872, 1047, 1782
BstDEI CTNAG 4 cut(s) 362, 956, 1500, 1795
BstEII GGTNACC 1 cut(s) 1761
BstENI CCTNNNNNAGG 1 cut(s) 1445
BstF5I GGATG 5 cut(s) 130, 687, 743, 1687, 1813
BstFNI CGCG 1 cut(s) 12
BstHHI GCGC 3 cut(s) 14, 86, 1051
BstKTI GATC 6 cut(s) 187, 278, 1130, 1281, 1861, 1891
BstMAI GTCTC 3 cut(s) 18, 236, 558
BstMBI GATC 6 cut(s) 184, 275, 1127, 1278, 1858, 1888
BstMCI CGRYCG 1 cut(s) 10
BstMWI GCNNNNNNNGC 4 cut(s) 11, 968, 1846, 1872
BstNI CCWGG 1 cut(s) 1181
BstNSI RCATGY 3 cut(s) 719, 874, 1049
BstPAI GACNNNNGTC 2 cut(s) 1759, 1803
BstPI GGTNACC 1 cut(s) 1761
BstSCI CCNGG 1 cut(s) 1179
BstSFI CTRYAG 3 cut(s) 1091, 1110, 1384
BstSLI GKGCMC 1 cut(s) 1289
BstUI CGCG 1 cut(s) 12
BstV1I GCAGC 1 cut(s) 272
BstV2I GAAGAC 1 cut(s) 461
BstX2I RGATCY 2 cut(s) 184, 1888
BstYI RGATCY 2 cut(s) 184, 1888
BstZI CGGCCG 1 cut(s) 7
BsuI GTATCC 1 cut(s) 1669
BsuRI GGCC 8 cut(s) 5, 9, 1149, 1547, 1637, 1710, 1780, 1784
BtgZI GCGATG 1 cut(s) 471
BtsCI GGATG 5 cut(s) 130, 687, 743, 1687, 1813
BtsIMutI CAGTG 2 cut(s) 964, 973
Cac8I GCNNGC 7 cut(s) 7, 369, 652, 721, 872, 1047, 1782
CciI TCATGA 2 cut(s) 136, 850
CfoI GCGC 3 cut(s) 14, 86, 1051
Cfr10I RCCGGY 2 cut(s) 5, 1780
Cfr13I GGNCC 4 cut(s) 582, 1545, 1732, 1783
CpoI CGGWCCG 1 cut(s) 1732
Csp6I GTAC 5 cut(s) 68, 640, 750, 1022, 1457
CspCI CAANNNNNGTGG 2 cut(s) 1410, 1445
CspI CGGWCCG 1 cut(s) 1732
CviAII CATG 9 cut(s) 137, 716, 756, 801, 851, 871, 1046, 1473, 1820
CviQI GTAC 5 cut(s) 68, 640, 750, 1022, 1457
DdeI CTNAG 4 cut(s) 362, 956, 1500, 1795
DpnI GATC 6 cut(s) 186, 277, 1129, 1280, 1860, 1890
DpnII GATC 6 cut(s) 184, 275, 1127, 1278, 1858, 1888
DriI GACNNNNNGTC 1 cut(s) 382
EaeI YGGCCR 3 cut(s) 3, 7, 1708
EagI CGGCCG 1 cut(s) 7
Eam1104I CTCTTC 1 cut(s) 556
Eam1105I GACNNNNNGTC 1 cut(s) 382
EarI CTCTTC 1 cut(s) 556
EclXI CGGCCG 1 cut(s) 7
Eco24I GRGCYC 1 cut(s) 443
Eco47I GGWCC 2 cut(s) 582, 1732
Eco52I CGGCCG 1 cut(s) 7
Eco91I GGTNACC 1 cut(s) 1761
EcoNI CCTNNNNNAGG 1 cut(s) 1445
EcoO65I GGTNACC 1 cut(s) 1761
EcoRII CCWGG 1 cut(s) 1179
EcoT38I GRGCYC 1 cut(s) 443
Esp3I CGTCTC 1 cut(s) 18
FaeI CATG 9 cut(s) 140, 719, 759, 804, 854, 874, 1049, 1476, 1823
FaqI GGGAC 2 cut(s) 325, 726
FatI CATG 9 cut(s) 136, 715, 755, 800, 850, 870, 1045, 1472, 1819
FauI CCCGC 1 cut(s) 1854
FauNDI CATATG 1 cut(s) 657
Fnu4HI GCNGC 2 cut(s) 10, 261
FokI GGATG 5 cut(s) 137, 674, 750, 1694, 1800
FriOI GRGCYC 1 cut(s) 443
FseI GGCCGGCC 2 cut(s) 9, 1784
Fsp4HI GCNGC 2 cut(s) 10, 261
FspBI CTAG 1 cut(s) 368
FspI TGCGCA 2 cut(s) 85, 1050
GlaI GCGC 3 cut(s) 13, 85, 1050
GluI GCNGC 2 cut(s) 10, 261
GsaI CCCAGC 1 cut(s) 334
GsuI CTGGAG 1 cut(s) 1752
HaeIII GGCC 8 cut(s) 5, 9, 1149, 1547, 1637, 1710, 1780, 1784
HapII CCGG 6 cut(s) 6, 867, 1759, 1781, 1837, 1969
HhaI GCGC 3 cut(s) 14, 86, 1051
Hin1II CATG 9 cut(s) 140, 719, 759, 804, 854, 874, 1049, 1476, 1823
Hin6I GCGC 3 cut(s) 12, 84, 1049
HinP1I GCGC 3 cut(s) 12, 84, 1049
HincII GTYRAC 1 cut(s) 598
HindII GTYRAC 1 cut(s) 598
HindIII AAGCTT 1 cut(s) 1873
HinfI GANTC 7 cut(s) 128, 1076, 1553, 1718, 1755, 1793, 1957
HpaII CCGG 6 cut(s) 6, 867, 1759, 1781, 1837, 1969
HphI GGTGA 3 cut(s) 41, 566, 1755
Hpy166II GTNNAC 6 cut(s) 68, 573, 598, 1287, 1364, 1572
Hpy188I TCNGA 7 cut(s) 305, 665, 1081, 1141, 1736, 1798, 1893
Hpy188III TCNNGA 6 cut(s) 137, 851, 1309, 1409, 1485, 1886
Hpy8I GTNNAC 6 cut(s) 68, 573, 598, 1287, 1364, 1572
Hpy99I CGWCG 3 cut(s) 626, 1777, 1916
HpyAV CCTTC 4 cut(s) 320, 354, 1406, 1835
HpyCH4III ACNGT 6 cut(s) 29, 79, 382, 1492, 1855, 1934
HpyCH4IV ACGT 2 cut(s) 464, 569
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 968, 1846, 1872
HpyF3I CTNAG 4 cut(s) 362, 956, 1500, 1795
HpySE526I ACGT 2 cut(s) 464, 569
Hsp92II CATG 9 cut(s) 140, 719, 759, 804, 854, 874, 1049, 1476, 1823
HspAI GCGC 3 cut(s) 12, 84, 1049
KroI GCCGGC 2 cut(s) 5, 1780
KroNI GCCGGC 2 cut(s) 7, 1782
Kzo9I GATC 6 cut(s) 184, 275, 1127, 1278, 1858, 1888
LmnI GCTCC 5 cut(s) 208, 446, 665, 1417, 1879
Lsp1109I GCAGC 1 cut(s) 272
LweI GCATC 3 cut(s) 494, 844, 1461
MaeI CTAG 1 cut(s) 368
MaeII ACGT 2 cut(s) 464, 569
MaeIII GTNAC 3 cut(s) 177, 374, 1761
MalI GATC 6 cut(s) 186, 277, 1129, 1280, 1860, 1890
MboI GATC 6 cut(s) 184, 275, 1127, 1278, 1858, 1888
MfeI CAATTG 1 cut(s) 588
MflI RGATCY 2 cut(s) 184, 1888
MhlI GDGCHC 2 cut(s) 443, 1289
MlyI GAGTC 3 cut(s) 1712, 1749, 1787
MmeI TCCRAC 5 cut(s) 219, 468, 715, 1759, 1916
MroNI GCCGGC 2 cut(s) 5, 1780
MroXI GAANNNNTTC 1 cut(s) 1689
MslI CAYNNNNRTG 2 cut(s) 1674, 1818
MspCI CTTAAG 1 cut(s) 1370
MspI CCGG 6 cut(s) 6, 867, 1759, 1781, 1837, 1969
MspR9I CCNGG 1 cut(s) 1181
MunI CAATTG 1 cut(s) 588
MvaI CCWGG 1 cut(s) 1181
MvnI CGCG 1 cut(s) 12
MwoI GCNNNNNNNGC 4 cut(s) 11, 968, 1846, 1872
NaeI GCCGGC 2 cut(s) 7, 1782
NdeI CATATG 1 cut(s) 657
NdeII GATC 6 cut(s) 184, 275, 1127, 1278, 1858, 1888
NgoMIV GCCGGC 2 cut(s) 5, 1780
NheI GCTAGC 1 cut(s) 367
NlaIII CATG 9 cut(s) 140, 719, 759, 804, 854, 874, 1049, 1476, 1823
NlaIV GGNNCC 5 cut(s) 186, 442, 1419, 1480, 1973
NmeAIII GCCGAG 1 cut(s) 1892
NmuCI GTSAC 2 cut(s) 374, 1761
NsbI TGCGCA 2 cut(s) 85, 1050
NspI RCATGY 3 cut(s) 719, 874, 1049
PaeI GCATGC 2 cut(s) 874, 1049
PagI TCATGA 2 cut(s) 136, 850
PcsI WCGNNNNNNNCGW 1 cut(s) 1952
PdiI GCCGGC 2 cut(s) 7, 1782
PdmI GAANNNNTTC 1 cut(s) 1689
PfeI GAWTC 4 cut(s) 128, 1076, 1553, 1957
PkrI GCNGC 2 cut(s) 11, 262
PleI GAGTC 3 cut(s) 1712, 1749, 1787
PpsI GAGTC 3 cut(s) 1712, 1749, 1787
PshAI GACNNNNGTC 2 cut(s) 1759, 1803
PsiI TTATAA 2 cut(s) 1467, 1987
Psp6I CCWGG 1 cut(s) 1179
PspEI GGTNACC 1 cut(s) 1761
PspFI CCCAGC 1 cut(s) 330
PspGI CCWGG 1 cut(s) 1179
PspN4I GGNNCC 5 cut(s) 186, 442, 1419, 1480, 1973
PspPI GGNCC 4 cut(s) 582, 1545, 1732, 1783
PsrI GAACNNNNNNTAC 2 cut(s) 1107, 1139
PsuI RGATCY 2 cut(s) 184, 1888
RigI GGCCGGCC 2 cut(s) 9, 1784
RsaI GTAC 5 cut(s) 69, 641, 751, 1023, 1458
RsaNI GTAC 5 cut(s) 68, 640, 750, 1022, 1457
RseI CAYNNNNRTG 2 cut(s) 1674, 1818
Rsr2I CGGWCCG 1 cut(s) 1732
RsrII CGGWCCG 1 cut(s) 1732
SatI GCNGC 2 cut(s) 10, 261
Sau3AI GATC 6 cut(s) 184, 275, 1127, 1278, 1858, 1888
Sau96I GGNCC 4 cut(s) 582, 1545, 1732, 1783
ScaI AGTACT 1 cut(s) 751
SchI GAGTC 3 cut(s) 1712, 1749, 1787
ScrFI CCNGG 1 cut(s) 1181
SduI GDGCHC 2 cut(s) 443, 1289
SfaNI GCATC 3 cut(s) 494, 844, 1461
SfcI CTRYAG 3 cut(s) 1091, 1110, 1384
SinI GGWCC 2 cut(s) 582, 1732
SmiMI CAYNNNNRTG 2 cut(s) 1674, 1818
SmlI CTYRAG 4 cut(s) 402, 1307, 1370, 1483
SmoI CTYRAG 4 cut(s) 402, 1307, 1370, 1483
SphI GCATGC 2 cut(s) 874, 1049
SsiI CCGC 4 cut(s) 10, 1590, 1730, 1847
SspI AATATT 2 cut(s) 494, 1011
SspMI CTAG 1 cut(s) 368
StyD4I CCNGG 1 cut(s) 1179
TaaI ACNGT 6 cut(s) 29, 79, 382, 1492, 1855, 1934
TaiI ACGT 2 cut(s) 467, 572
TaqI TCGA 7 cut(s) 274, 834, 1317, 1753, 1791, 1885, 1911
TatI WGTACW 1 cut(s) 749
TauI GCSGC 1 cut(s) 12
TfiI GAWTC 4 cut(s) 128, 1076, 1553, 1957
TscAI CASTG 2 cut(s) 964, 973
TseFI GTSAC 2 cut(s) 374, 1761
TseI GCWGC 1 cut(s) 260
Tsp45I GTSAC 2 cut(s) 374, 1761
TspDTI ATGAA 6 cut(s) 48, 744, 839, 1224, 1461, 1698
TspRI CASTG 2 cut(s) 964, 973
Vha464I CTTAAG 1 cut(s) 1370
VneI GTGCAC 1 cut(s) 1285
VpaK11BI GGWCC 2 cut(s) 582, 1732
XagI CCTNNNNNAGG 1 cut(s) 1445
XapI RAATTY 4 cut(s) 504, 743, 886, 1899
XceI RCATGY 3 cut(s) 719, 874, 1049
XmnI GAANNNNTTC 1 cut(s) 1689
XspI CTAG 1 cut(s) 368
ZrmI AGTACT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.