Rmu_sc0004192.1_g000022

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004192.1
OG0000053
Physical Location & Seq
Forward (+)
88777 .. 91201
2425 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004192.1_g000022.1.cds

Sequence Viewer

Length: 1668 bp
atgttccctgctttagcgtctgacctagctcaaaccccgaatattactgccactcctgatgttattcaatgttcagctaatttttccccgggcatttggggtgatcattttctgtcatatgcttccatggaagcggcagatagtaaaagtaagaaacatgtccaagacttgaaggaagaactgaagaggatgataatggctccaacgaaaaggccttcacaaaagttgcacttcatcaaccacattcagcgcttaggtgtctcataccatttcgaagatgagattgaccaaattttgcagcaagttcaccgagaagaagaatatgatgatctttgcaccactgctctaagctttcgattgcttagacaacatggttataacgcttcatgcaatatgtttaacaagttcaaggatggtgatgggaaatttaaagaatcgcttgttaatgatgtagtcggcctgttaagcttgtatgaagcctcgcatcttcagatgcctggggaggatttactaaacgaggcactaaccttctccaccgctcatctcatgtctgcagcacaccatttaagctcatcatctcagctttcaaaacaagtaactcatgccttgtatcagcccctttggaagggcatgccaaggattgaagcgaggcatcacttgtctatttaccaagaagatgatgcgcataatgaaactctcctgaattttgcaaagttcgattttaacactgtgcagaaagtccatcagaaagaactgagcgaaattacgaggtggtggaaggatttggactttgcaaacaagctaccttttgcaagagacagggtagttgaggcctatttttgggctttggcaatctactttgagccggaatattcctttgcccggatggtgtcagccaaagctactgctataattacagtcattgacgacatatacgatgtgcagggcacgtacgaagaattagagaactttactgaagctattgagaggtgggacatttctgctgttgatcaactgccagaatatatgaaagtgtgttataaagcgctgttgaatttcttcaccgagcttgaagaaagtctaacgaataagggaatcttataccgcctccactatgcgagagaaggatttaaagttcaagtcagagcttacttccaggaagcaaaatggttcaaacaaaagtacataccatcaatggaagagtatatgtctgtggaacgctatacatccttcttcatggtagcaacagtgtcatttgttggaatgggagttattgttacaaaagactccatggattgggttttcagtgaacctaagattttaaaggcctcatctataattggcagactcatgaatgaccttgtaggccataagtttgagcaaaagagagaacacattgcatcagccgtggaatgctacatgaagcaatatggcgtcacagaagaagaagcagaagtcgagctaactaaacaagtgaatgacgcatggaaagacataaacgaagagtggctcgatgccacctctatcccgaggcctctactcttgcggattttgaactttgcacgttctagtgaagttctatacaagggtgaagatgtgtacacacattctgaaaatgtgctcaagggttttgtagtttcactctttatcgaaaccgtgcccatataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

555

Amino Acids

64.23

Weight (kDa)

5.4

Isoelectric Point (pI)

47.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 378, 1041
Acc16I TGCGCA 1 cut(s) 684
AccB7I CCANNNNNTGG 1 cut(s) 1296
AccBSI CCGCTC 1 cut(s) 539
AciI CCGC 4 cut(s) 134, 537, 1105, 1546
AcsI RAATTY 4 cut(s) 291, 425, 703, 1054
AcuI CTGAAG 3 cut(s) 203, 473, 996
AcyI GRCGYC 1 cut(s) 1434
AfaI GTAC 3 cut(s) 953, 1184, 1601
AfeI AGCGCT 2 cut(s) 251, 1047
AfiI CCNNNNNNNGG 4 cut(s) 625, 840, 882, 1296
AflIII ACRYGT 1 cut(s) 157
AjnI CCWGG 2 cut(s) 496, 1155
AloI GAACNNNNNNTCC 2 cut(s) 1119, 1151
Alw21I GWGCWC 1 cut(s) 1623
Alw26I GTCTC 2 cut(s) 265, 810
Ama87I CYCGRG 2 cut(s) 88, 1528
Aor51HI AGCGCT 2 cut(s) 251, 1047
AoxI GGCC 6 cut(s) 212, 457, 831, 1326, 1366, 1532
ApeKI GCWGC 2 cut(s) 298, 554
ApoI RAATTY 4 cut(s) 291, 425, 703, 1054
Asp700I GAANNNNTTC 1 cut(s) 1058
AspLEI GCGC 3 cut(s) 252, 685, 1048
AsuC2I CCSGG 3 cut(s) 89, 90, 883
AsuHPI GGTGA 5 cut(s) 113, 299, 428, 1054, 1601
AsuII TTCGAA 1 cut(s) 273
AvaI CYCGRG 2 cut(s) 88, 1528
BaeGI GKGCMC 2 cut(s) 950, 1662
Bbv12I GWGCWC 1 cut(s) 1623
BbvI GCAGC 2 cut(s) 310, 566
BccI CCATC 5 cut(s) 407, 413, 750, 880, 1198
BceAI ACGGC 1 cut(s) 1391
BciT130I CCWGG 2 cut(s) 498, 1157
BclI TGATCA 2 cut(s) 103, 1009
BcnI CCSGG 3 cut(s) 89, 90, 883
BcoDI GTCTC 2 cut(s) 265, 810
BfaI CTAG 2 cut(s) 26, 1569
BfmI CTRYAG 1 cut(s) 552
BfoI RGCGCY 2 cut(s) 253, 1049
BisI GCNGC 3 cut(s) 135, 299, 555
BlsI GCNGC 3 cut(s) 136, 300, 556
Bme1390I CCNGG 5 cut(s) 89, 90, 498, 883, 1157
BmeT110I CYCGRG 2 cut(s) 88, 1528
BmiI GGNNCC 1 cut(s) 201
BmrFI CCNGG 5 cut(s) 89, 90, 498, 883, 1157
BmsI GCATC 6 cut(s) 483, 493, 661, 670, 1409, 1504
Bpu10I CCTNAGC 1 cut(s) 253
Bpu14I TTCGAA 1 cut(s) 273
BpuEI CTTGAG 1 cut(s) 1607
BpuMI CCSGG 3 cut(s) 89, 90, 883
BsaAI YACGTR 1 cut(s) 951
BsaHI GRCGYC 1 cut(s) 1434
BsaJI CCNNGG 8 cut(s) 87, 88, 126, 497, 635, 1290, 1407, 1529
BsaXI ACNNNNNCTCC 4 cut(s) 37, 67, 1260, 1290
Bsc4I CCNNNNNNNGG 4 cut(s) 625, 840, 882, 1296
Bse3DI GCAATG 1 cut(s) 1395
BseBI CCWGG 2 cut(s) 498, 1157
BseDI CCNNGG 8 cut(s) 87, 88, 126, 497, 635, 1290, 1407, 1529
BseGI GGATG 4 cut(s) 195, 418, 891, 1226
BseLI CCNNNNNNNGG 4 cut(s) 625, 840, 882, 1296
BseMI GCAATG 1 cut(s) 1395
BseMII CTCAG 2 cut(s) 593, 746
BseSI GKGCMC 2 cut(s) 950, 1662
BseXI GCAGC 2 cut(s) 310, 566
BsgI GTGCAG 2 cut(s) 752, 962
BshFI GGCC 6 cut(s) 214, 459, 833, 1328, 1368, 1534
BsiHKAI GWGCWC 1 cut(s) 1623
BsiHKCI CYCGRG 2 cut(s) 88, 1528
BsiSI CCGG 3 cut(s) 89, 866, 883
BsiWI CGTACG 1 cut(s) 951
BslFI GGGAC 1 cut(s) 1007
BslI CCNNNNNNNGG 4 cut(s) 625, 840, 882, 1296
BsmAI GTCTC 2 cut(s) 265, 810
BsmFI GGGAC 1 cut(s) 1007
BsmI GAATGC 1 cut(s) 1418
BsnI GGCC 6 cut(s) 214, 459, 833, 1328, 1368, 1534
BsoBI CYCGRG 2 cut(s) 88, 1528
Bsp119I TTCGAA 1 cut(s) 273
Bsp1286I GDGCHC 3 cut(s) 950, 1623, 1662
Bsp1407I TGTACA 1 cut(s) 1599
Bsp143I GATC 3 cut(s) 103, 328, 1009
Bsp19I CCATGG 2 cut(s) 126, 1290
BspACI CCGC 4 cut(s) 134, 537, 1105, 1546
BspANI GGCC 6 cut(s) 214, 459, 833, 1328, 1368, 1534
BspCNI CTCAG 2 cut(s) 592, 747
BspHI TCATGA 1 cut(s) 1350
BspLI GGNNCC 1 cut(s) 201
BspMAI CTGCAG 1 cut(s) 556
BspT104I TTCGAA 1 cut(s) 273
BsrBI CCGCTC 1 cut(s) 539
BsrDI GCAATG 1 cut(s) 1395
BsrGI TGTACA 1 cut(s) 1599
BssECI CCNNGG 8 cut(s) 87, 88, 126, 497, 635, 1290, 1407, 1529
BssMI GATC 3 cut(s) 103, 328, 1009
BssNI GRCGYC 1 cut(s) 1434
BssT1I CCWWGG 3 cut(s) 126, 635, 1290
Bst2UI CCWGG 2 cut(s) 498, 1157
Bst4CI ACNGT 4 cut(s) 730, 919, 1249, 1657
Bst6I CTCTTC 3 cut(s) 179, 1194, 1497
BstACI GRCGYC 1 cut(s) 1434
BstAUI TGTACA 1 cut(s) 1599
BstBAI YACGTR 1 cut(s) 951
BstBI TTCGAA 1 cut(s) 273
BstC8I GCNNGC 1 cut(s) 632
BstDEI CTNAG 6 cut(s) 253, 347, 362, 579, 755, 1314
BstDSI CCRYGG 3 cut(s) 126, 1290, 1407
BstENI CCTNNNNNAGG 1 cut(s) 623
BstF5I GGATG 4 cut(s) 195, 418, 891, 1226
BstH2I RGCGCY 2 cut(s) 253, 1049
BstHHI GCGC 3 cut(s) 252, 685, 1048
BstKTI GATC 3 cut(s) 106, 331, 1012
BstMAI GTCTC 2 cut(s) 265, 810
BstMBI GATC 3 cut(s) 103, 328, 1009
BstMWI GCNNNNNNNGC 1 cut(s) 465
BstNI CCWGG 2 cut(s) 498, 1157
BstNSI RCATGY 2 cut(s) 161, 634
BstSCI CCNGG 5 cut(s) 87, 88, 496, 881, 1155
BstSFI CTRYAG 1 cut(s) 552
BstSLI GKGCMC 2 cut(s) 950, 1662
BstV1I GCAGC 2 cut(s) 310, 566
BsuRI GGCC 6 cut(s) 214, 459, 833, 1328, 1368, 1534
BtgI CCRYGG 3 cut(s) 126, 1290, 1407
BtsCI GGATG 4 cut(s) 195, 418, 891, 1226
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 4 cut(s) 339, 726, 1254, 1312
Cac8I GCNNGC 1 cut(s) 632
CciI TCATGA 1 cut(s) 1350
CfoI GCGC 3 cut(s) 252, 685, 1048
Cfr9I CCCGGG 1 cut(s) 88
CseI GACGC 3 cut(s) 6, 1423, 1490
Csp6I GTAC 3 cut(s) 952, 1183, 1600
CviQI GTAC 3 cut(s) 952, 1183, 1600
DdeI CTNAG 6 cut(s) 253, 347, 362, 579, 755, 1314
DpnI GATC 3 cut(s) 105, 330, 1011
DpnII GATC 3 cut(s) 103, 328, 1009
DraI TTTAAA 3 cut(s) 430, 1132, 1323
Eam1104I CTCTTC 3 cut(s) 179, 1194, 1497
EarI CTCTTC 3 cut(s) 179, 1194, 1497
Eco130I CCWWGG 3 cut(s) 126, 635, 1290
Eco147I AGGCCT 4 cut(s) 214, 833, 1328, 1534
Eco47III AGCGCT 2 cut(s) 251, 1047
Eco57I CTGAAG 3 cut(s) 203, 473, 996
Eco88I CYCGRG 2 cut(s) 88, 1528
EcoNI CCTNNNNNAGG 1 cut(s) 623
EcoRII CCWGG 2 cut(s) 496, 1155
EcoT14I CCWWGG 3 cut(s) 126, 635, 1290
ErhI CCWWGG 3 cut(s) 126, 635, 1290
FalI AAGNNNNNCTT 6 cut(s) 215, 247, 423, 455, 1082, 1114
FaqI GGGAC 1 cut(s) 1007
FauNDI CATATG 1 cut(s) 118
FbaI TGATCA 2 cut(s) 103, 1009
Fnu4HI GCNGC 3 cut(s) 135, 299, 555
FokI GGATG 4 cut(s) 202, 425, 898, 1213
Fsp4HI GCNGC 3 cut(s) 135, 299, 555
FspAI RTGCGCAY 1 cut(s) 684
FspBI CTAG 2 cut(s) 26, 1569
FspI TGCGCA 1 cut(s) 684
GlaI GCGC 3 cut(s) 251, 684, 1047
GluI GCNGC 3 cut(s) 135, 299, 555
HaeII RGCGCY 2 cut(s) 253, 1049
HaeIII GGCC 6 cut(s) 214, 459, 833, 1328, 1368, 1534
HapII CCGG 3 cut(s) 89, 866, 883
HgaI GACGC 3 cut(s) 6, 1423, 1490
HhaI GCGC 3 cut(s) 252, 685, 1048
Hin1I GRCGYC 1 cut(s) 1434
Hin6I GCGC 3 cut(s) 250, 683, 1046
HinP1I GCGC 3 cut(s) 250, 683, 1046
HindIII AAGCTT 2 cut(s) 349, 466
HinfI GANTC 4 cut(s) 434, 1095, 1286, 1347
HpaII CCGG 3 cut(s) 89, 866, 883
HphI GGTGA 5 cut(s) 113, 299, 428, 1054, 1601
Hpy166II GTNNAC 4 cut(s) 307, 1310, 1600, 1602
Hpy188I TCNGA 5 cut(s) 22, 492, 747, 1145, 1612
Hpy188III TCNNGA 4 cut(s) 56, 700, 1351, 1528
Hpy8I GTNNAC 4 cut(s) 307, 1310, 1600, 1602
HpyAV CCTTC 7 cut(s) 166, 225, 538, 619, 772, 1118, 1240
HpyCH4III ACNGT 4 cut(s) 730, 919, 1249, 1657
HpyCH4IV ACGT 2 cut(s) 950, 1564
HpyF10VI GCNNNNNNNGC 1 cut(s) 465
HpyF3I CTNAG 6 cut(s) 253, 347, 362, 579, 755, 1314
HpySE526I ACGT 2 cut(s) 950, 1564
Hsp92I GRCGYC 1 cut(s) 1434
HspAI GCGC 3 cut(s) 250, 683, 1046
Ksp22I TGATCA 2 cut(s) 103, 1009
Kzo9I GATC 3 cut(s) 103, 328, 1009
LmnI GCTCC 1 cut(s) 205
Lsp1109I GCAGC 2 cut(s) 310, 566
LweI GCATC 6 cut(s) 483, 493, 661, 670, 1409, 1504
MaeI CTAG 2 cut(s) 26, 1569
MaeII ACGT 2 cut(s) 950, 1564
MaeIII GTNAC 3 cut(s) 595, 1276, 1435
MalI GATC 3 cut(s) 105, 330, 1011
MbiI CCGCTC 1 cut(s) 539
MboI GATC 3 cut(s) 103, 328, 1009
MhlI GDGCHC 3 cut(s) 950, 1623, 1662
MluCI AATT 9 cut(s) 79, 291, 425, 703, 762, 912, 959, 1054, 1338
MlyI GAGTC 2 cut(s) 1280, 1341
MmeI TCCRAC 2 cut(s) 227, 1240
MroXI GAANNNNTTC 1 cut(s) 1058
MseI TTAA 8 cut(s) 399, 429, 444, 464, 566, 723, 1131, 1322
MspI CCGG 3 cut(s) 89, 866, 883
MspR9I CCNGG 5 cut(s) 89, 90, 498, 883, 1157
Mva1269I GAATGC 1 cut(s) 1418
MvaI CCWGG 2 cut(s) 498, 1157
MwoI GCNNNNNNNGC 1 cut(s) 465
NciI CCSGG 3 cut(s) 89, 90, 883
NcoI CCATGG 2 cut(s) 126, 1290
NdeI CATATG 1 cut(s) 118
NdeII GATC 3 cut(s) 103, 328, 1009
NlaIV GGNNCC 1 cut(s) 201
NmuCI GTSAC 1 cut(s) 1435
NsbI TGCGCA 1 cut(s) 684
NspI RCATGY 2 cut(s) 161, 634
NspV TTCGAA 1 cut(s) 273
PaeI GCATGC 1 cut(s) 634
PagI TCATGA 1 cut(s) 1350
PceI AGGCCT 4 cut(s) 214, 833, 1328, 1534
PciI ACATGT 1 cut(s) 157
PcsI WCGNNNNNNNCGW 1 cut(s) 933
PctI GAATGC 1 cut(s) 1418
PdmI GAANNNNTTC 1 cut(s) 1058
PfeI GAWTC 2 cut(s) 434, 1095
Pfl23II CGTACG 1 cut(s) 951
PflMI CCANNNNNTGG 1 cut(s) 1296
PfoI TCCNGGA 1 cut(s) 1155
PkrI GCNGC 3 cut(s) 136, 300, 556
PleI GAGTC 2 cut(s) 1280, 1341
PpsI GAGTC 2 cut(s) 1280, 1341
Ppu21I YACGTR 1 cut(s) 951
PscI ACATGT 1 cut(s) 157
PsiI TTATAA 2 cut(s) 378, 1041
Psp6I CCWGG 2 cut(s) 496, 1155
PspGI CCWGG 2 cut(s) 496, 1155
PspLI CGTACG 1 cut(s) 951
PspN4I GGNNCC 1 cut(s) 201
PstI CTGCAG 1 cut(s) 556
RsaI GTAC 3 cut(s) 953, 1184, 1601
RsaNI GTAC 3 cut(s) 952, 1183, 1600
SaqAI TTAA 8 cut(s) 399, 429, 444, 464, 566, 723, 1131, 1322
SatI GCNGC 3 cut(s) 135, 299, 555
Sau3AI GATC 3 cut(s) 103, 328, 1009
SchI GAGTC 2 cut(s) 1280, 1341
ScrFI CCNGG 5 cut(s) 89, 90, 498, 883, 1157
SduI GDGCHC 3 cut(s) 950, 1623, 1662
SfaNI GCATC 6 cut(s) 483, 493, 661, 670, 1409, 1504
SfcI CTRYAG 1 cut(s) 552
SfuI TTCGAA 1 cut(s) 273
SmaI CCCGGG 1 cut(s) 90
SmlI CTYRAG 1 cut(s) 1622
SmoI CTYRAG 1 cut(s) 1622
SphI GCATGC 1 cut(s) 634
Sse9I AATT 9 cut(s) 79, 291, 425, 703, 762, 912, 959, 1054, 1338
SseBI AGGCCT 4 cut(s) 214, 833, 1328, 1534
SsiI CCGC 4 cut(s) 134, 537, 1105, 1546
SspI AATATT 2 cut(s) 43, 872
SspMI CTAG 2 cut(s) 26, 1569
StuI AGGCCT 4 cut(s) 214, 833, 1328, 1534
StyD4I CCNGG 5 cut(s) 87, 88, 496, 881, 1155
StyI CCWWGG 3 cut(s) 126, 635, 1290
TaaI ACNGT 4 cut(s) 730, 919, 1249, 1657
TaiI ACGT 2 cut(s) 953, 1567
TaqI TCGA 6 cut(s) 273, 355, 717, 1458, 1512, 1650
TasI AATT 9 cut(s) 79, 291, 425, 703, 762, 912, 959, 1054, 1338
TatI WGTACW 2 cut(s) 1182, 1599
TauI GCSGC 1 cut(s) 137
TfiI GAWTC 2 cut(s) 434, 1095
Tru1I TTAA 8 cut(s) 399, 429, 444, 464, 566, 723, 1131, 1322
Tru9I TTAA 8 cut(s) 399, 429, 444, 464, 566, 723, 1131, 1322
TscAI CASTG 4 cut(s) 346, 733, 1254, 1312
TseFI GTSAC 1 cut(s) 1435
TseI GCWGC 2 cut(s) 298, 554
Tsp45I GTSAC 1 cut(s) 1435
TspDTI ATGAA 8 cut(s) 223, 375, 489, 705, 1043, 1225, 1367, 1436
TspMI CCCGGG 1 cut(s) 88
TspRI CASTG 4 cut(s) 346, 733, 1254, 1312
Van91I CCANNNNNTGG 1 cut(s) 1296
XagI CCTNNNNNAGG 1 cut(s) 623
XapI RAATTY 4 cut(s) 291, 425, 703, 1054
XceI RCATGY 2 cut(s) 161, 634
XmaI CCCGGG 1 cut(s) 88
XmnI GAANNNNTTC 1 cut(s) 1058
XspI CTAG 2 cut(s) 26, 1569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.