Rh1BG060600

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000053
Physical Location & Seq
Reverse (-)
8950789 .. 8953275
2487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG060600.1

Sequence Viewer

Length: 1485 bp
ATGTCTGTCCCTGCTTTAGCATCTGACCTAGCTCAAACCCCGAATATTACTGCTACTCCTGATGTTACTCGATGTTCAGCTATTTTTTCCCCGAGCATTTGGGGTGATCATTTTCTGTCATATGCTCCCATGGAAGCGGCAGATAGTAAAGTTAAGAAACATGTCCAAGACTTGAAGGAAGAGCTCAAGAGGATGGTAATGGCTCCAATGAAAAGGCCTTCACAAAAGTTGCACTTCATCAACCACATTCAGCGCTTAGGTGTCTCATACCATTTCGAAGATGAGATTGACCAAATTTTGCAGCAAGTTCACCGAGAAGAAGAAGAATATGATGATCTTTGCACCACTGCTCTAAGCTTTCGATTGCTTAGACAACATGGTTATAACGCTTCATGCAATATGTTTAACAAGTTCAAGGATGATGATGGGAAATTTAAAGAATCGCTCGTTAATGATGTAGTTGGCCTGTTAAGCTTATATGAAGCCTCTCATATTCTGATGCCTGGGGAGGATTTACTAAACGAGGCACTAATCTTCTCCACGGCTCATCTCAAGTCTACAGCACACCGTTTAAGCTTATCATCTCAGCTTTCAAAACAAGTAACTCATGCCTTGTATCAGCCCCTTTGGAAGGGCATCCCAAGGATTGAAGCGAGGCATCACTTGTCTATTTACCAAGACGATGATGCACATAATGAAACTCTCCTGAATTTTGCAAAGTTTGATTTTAACACTGTGCAGAAAGTCCATCAGAAAGAACTGAGCGAAATTACGAGGTGGTGGAAGGATTTCGACTTTGCAAACAAGCTACCTTTTGCAAGAGACAGGGTAGTTGAGGCCTATTTTTGGGCTTTGGCAGTCTACTTTGAGCCGGAATATTACTTTGCCCGGATGGTATTAGCCAAAGCTGCTGCTATAATTACAGTCATTGACGACATATACGATGTGTATGGCACATATGAAGAACTAGAGAGCTTTACTGAAGCTATTGAGAGGTGGGACATTTCCGCTGTTGATCAACTGCCAGATTATATGAAAGTGTGTTATGAAGTGCTGTTGAATTTCTTCACCAAGCTTGAAGGAAGTCTAACGCATAAGGGAATCTTATACCGCCTCCACTATGCGAGAGAAGGAATTTTAAAGGCCACATCTATAATTGGCAGACTCATGAATGATCTTGTAGGCCATAAGTTTGAGCAAAAGAGAGAACACATTGCATCAGCCGTGGAATGCTACATGAAGCAATATGGTGTCACAGAAGAAGAAGCAGAAGTCGAGTTAACTAAACAAGTGAATGACGCATGGAAAGACATAAACGAAGAGTGGCTCGATGCCACCTCTATCCCTAGGCCCCTACTCTTGCGGATTTTGAACTTGGCACGCTCTAGTGAAGTTCTATACAAGGGTGAAGATGTGTACACACATTCTGAAAATGTGCTCAAGGGTTATGTAGTCTCTCTCTTTATCGAACCCGTGCCCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

494

Amino Acids

57.12

Weight (kDa)

5.42

Isoelectric Point (pI)

47.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 33 - 205 1.4e-58 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 262 - 376 3.3e-46 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 303 - 366 3.1e-15 Terpene synthase family 2, C-terminal metal binding
Terpene_synth_C PF03936 376 - 437 1.2e-20 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 378 - 437 4.1e-17 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 384
AccI GTMKAC 2 cut(s) 557, 861
AciI CCGC 4 cut(s) 137, 1008, 1111, 1363
AcsI RAATTY 5 cut(s) 294, 431, 709, 1060, 1134
AcuI CTGAAG 1 cut(s) 1002
AfaI GTAC 1 cut(s) 1418
AfeI AGCGCT 1 cut(s) 254
AfiI CCNNNNNNNGG 2 cut(s) 631, 846
AflIII ACRYGT 1 cut(s) 160
AgsI TTSAA 7 cut(s) 175, 415, 594, 650, 1060, 1079, 1372
AjnI CCWGG 1 cut(s) 502
Alw21I GWGCWC 2 cut(s) 186, 1440
Alw26I GTCTC 3 cut(s) 268, 816, 1459
Ama87I CYCGRG 1 cut(s) 91
Aor51HI AGCGCT 1 cut(s) 254
AoxI GGCC 6 cut(s) 215, 463, 837, 1143, 1183, 1349
ApeKI GCWGC 3 cut(s) 301, 908, 911
ApoI RAATTY 5 cut(s) 294, 431, 709, 1060, 1134
Asp700I GAANNNNTTC 2 cut(s) 788, 1064
AspA2I CCTAGG 1 cut(s) 1346
AspLEI GCGC 1 cut(s) 255
AspS9I GGNCC 1 cut(s) 1350
AsuC2I CCSGG 1 cut(s) 889
AsuHPI GGTGA 4 cut(s) 116, 302, 1060, 1418
AsuII TTCGAA 1 cut(s) 276
AvaI CYCGRG 1 cut(s) 91
AvrII CCTAGG 1 cut(s) 1346
BaeGI GKGCMC 1 cut(s) 1479
BanII GRGCYC 1 cut(s) 186
Bbv12I GWGCWC 2 cut(s) 186, 1440
BbvI GCAGC 3 cut(s) 313, 895, 898
BccI CCATC 4 cut(s) 187, 419, 756, 886
BceAI ACGGC 2 cut(s) 558, 1208
BciT130I CCWGG 1 cut(s) 504
BclI TGATCA 2 cut(s) 106, 1015
BcnI CCSGG 1 cut(s) 889
BcoDI GTCTC 3 cut(s) 268, 816, 1459
BfaI CTAG 4 cut(s) 29, 968, 1347, 1386
BfmI CTRYAG 1 cut(s) 558
BfoI RGCGCY 1 cut(s) 256
BisI GCNGC 4 cut(s) 138, 302, 909, 912
BlnI CCTAGG 1 cut(s) 1346
BlsI GCNGC 4 cut(s) 139, 303, 910, 913
Bme1390I CCNGG 2 cut(s) 504, 889
BmeT110I CYCGRG 1 cut(s) 91
BmgT120I GGNCC 1 cut(s) 1350
BmiI GGNNCC 2 cut(s) 204, 1352
BmrFI CCNGG 2 cut(s) 504, 889
BmsI GCATC 7 cut(s) 29, 489, 645, 667, 676, 1226, 1321
Bpu10I CCTNAGC 1 cut(s) 256
Bpu14I TTCGAA 1 cut(s) 276
BpuEI CTTGAG 3 cut(s) 170, 536, 1424
BpuMI CCSGG 1 cut(s) 889
BsaJI CCNNGG 6 cut(s) 129, 503, 540, 641, 1224, 1346
BsaXI ACNNNNNCTCC 2 cut(s) 40, 70
Bsc4I CCNNNNNNNGG 2 cut(s) 631, 846
Bse3DI GCAATG 1 cut(s) 1212
BseBI CCWGG 1 cut(s) 504
BseDI CCNNGG 6 cut(s) 129, 503, 540, 641, 1224, 1346
BseGI GGATG 4 cut(s) 198, 424, 636, 897
BseLI CCNNNNNNNGG 2 cut(s) 631, 846
BseMI GCAATG 1 cut(s) 1212
BseMII CTCAG 2 cut(s) 599, 752
BseSI GKGCMC 1 cut(s) 1479
BseXI GCAGC 3 cut(s) 313, 895, 898
BsgI GTGCAG 1 cut(s) 758
BshFI GGCC 6 cut(s) 217, 465, 839, 1145, 1185, 1351
BsiHKAI GWGCWC 2 cut(s) 186, 1440
BsiHKCI CYCGRG 1 cut(s) 91
BsiSI CCGG 2 cut(s) 872, 889
BslFI GGGAC 1 cut(s) 1013
BslI CCNNNNNNNGG 2 cut(s) 631, 846
BsmAI GTCTC 3 cut(s) 268, 816, 1459
BsmFI GGGAC 1 cut(s) 1013
BsmI GAATGC 1 cut(s) 1235
BsnI GGCC 6 cut(s) 217, 465, 839, 1145, 1185, 1351
BsoBI CYCGRG 1 cut(s) 91
Bsp119I TTCGAA 1 cut(s) 276
Bsp1286I GDGCHC 3 cut(s) 186, 1440, 1479
Bsp1407I TGTACA 1 cut(s) 1416
Bsp143I GATC 4 cut(s) 106, 334, 1015, 1174
Bsp19I CCATGG 1 cut(s) 129
BspACI CCGC 4 cut(s) 137, 1008, 1111, 1363
BspANI GGCC 6 cut(s) 217, 465, 839, 1145, 1185, 1351
BspCNI CTCAG 2 cut(s) 598, 753
BspHI TCATGA 1 cut(s) 1167
BspLI GGNNCC 2 cut(s) 204, 1352
BspQI GCTCTTC 1 cut(s) 174
BspT104I TTCGAA 1 cut(s) 276
BsrDI GCAATG 1 cut(s) 1212
BsrGI TGTACA 1 cut(s) 1416
BssECI CCNNGG 6 cut(s) 129, 503, 540, 641, 1224, 1346
BssMI GATC 4 cut(s) 106, 334, 1015, 1174
BssT1I CCWWGG 3 cut(s) 129, 641, 1346
Bst2UI CCWGG 1 cut(s) 504
Bst4CI ACNGT 3 cut(s) 569, 736, 925
Bst6I CTCTTC 2 cut(s) 174, 1314
BstAUI TGTACA 1 cut(s) 1416
BstBI TTCGAA 1 cut(s) 276
BstC8I GCNNGC 1 cut(s) 1381
BstDEI CTNAG 5 cut(s) 256, 353, 368, 585, 761
BstDSI CCRYGG 3 cut(s) 129, 540, 1224
BstENI CCTNNNNNAGG 1 cut(s) 629
BstF5I GGATG 4 cut(s) 198, 424, 636, 897
BstH2I RGCGCY 1 cut(s) 256
BstHHI GCGC 1 cut(s) 255
BstKTI GATC 4 cut(s) 109, 337, 1018, 1177
BstMAI GTCTC 3 cut(s) 268, 816, 1459
BstMBI GATC 4 cut(s) 106, 334, 1015, 1174
BstMWI GCNNNNNNNGC 2 cut(s) 471, 908
BstNI CCWGG 1 cut(s) 504
BstNSI RCATGY 1 cut(s) 164
BstSCI CCNGG 2 cut(s) 502, 887
BstSFI CTRYAG 1 cut(s) 558
BstSLI GKGCMC 1 cut(s) 1479
BstV1I GCAGC 3 cut(s) 313, 895, 898
BsuRI GGCC 6 cut(s) 217, 465, 839, 1145, 1185, 1351
BtgI CCRYGG 3 cut(s) 129, 540, 1224
BtsCI GGATG 4 cut(s) 198, 424, 636, 897
BtsI GCAGTG 1 cut(s) 345
BtsIMutI CAGTG 2 cut(s) 345, 732
Cac8I GCNNGC 1 cut(s) 1381
CciI TCATGA 1 cut(s) 1167
CfoI GCGC 1 cut(s) 255
Cfr13I GGNCC 1 cut(s) 1350
CseI GACGC 1 cut(s) 1307
Csp6I GTAC 1 cut(s) 1417
CviAII CATG 8 cut(s) 130, 161, 377, 393, 608, 1168, 1237, 1302
CviQI GTAC 1 cut(s) 1417
DdeI CTNAG 5 cut(s) 256, 353, 368, 585, 761
DpnI GATC 4 cut(s) 108, 336, 1017, 1176
DpnII GATC 4 cut(s) 106, 334, 1015, 1174
DraI TTTAAA 2 cut(s) 436, 1140
Eam1104I CTCTTC 2 cut(s) 174, 1314
EarI CTCTTC 2 cut(s) 174, 1314
Ecl136II GAGCTC 1 cut(s) 184
Eco130I CCWWGG 3 cut(s) 129, 641, 1346
Eco147I AGGCCT 2 cut(s) 217, 839
Eco24I GRGCYC 1 cut(s) 186
Eco47III AGCGCT 1 cut(s) 254
Eco53kI GAGCTC 1 cut(s) 184
Eco57I CTGAAG 1 cut(s) 1002
Eco88I CYCGRG 1 cut(s) 91
EcoICRI GAGCTC 1 cut(s) 184
EcoNI CCTNNNNNAGG 1 cut(s) 629
EcoO109I RGGNCCY 1 cut(s) 1350
EcoRII CCWGG 1 cut(s) 502
EcoT14I CCWWGG 3 cut(s) 129, 641, 1346
EcoT38I GRGCYC 1 cut(s) 186
ErhI CCWWGG 3 cut(s) 129, 641, 1346
FaeI CATG 8 cut(s) 133, 164, 380, 396, 611, 1171, 1240, 1305
FalI AAGNNNNNCTT 4 cut(s) 218, 250, 1088, 1120
FaqI GGGAC 1 cut(s) 1013
FatI CATG 8 cut(s) 129, 160, 376, 392, 607, 1167, 1236, 1301
FauNDI CATATG 2 cut(s) 121, 958
FbaI TGATCA 2 cut(s) 106, 1015
FblI GTMKAC 2 cut(s) 557, 861
Fnu4HI GCNGC 4 cut(s) 138, 302, 909, 912
FokI GGATG 4 cut(s) 205, 431, 623, 904
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 4 cut(s) 138, 302, 909, 912
FspBI CTAG 4 cut(s) 29, 968, 1347, 1386
GlaI GCGC 1 cut(s) 254
GluI GCNGC 4 cut(s) 138, 302, 909, 912
HaeII RGCGCY 1 cut(s) 256
HaeIII GGCC 6 cut(s) 217, 465, 839, 1145, 1185, 1351
HapII CCGG 2 cut(s) 872, 889
HgaI GACGC 1 cut(s) 1307
HhaI GCGC 1 cut(s) 255
Hin1II CATG 8 cut(s) 133, 164, 380, 396, 611, 1171, 1240, 1305
Hin6I GCGC 1 cut(s) 253
HinP1I GCGC 1 cut(s) 253
HincII GTYRAC 1 cut(s) 1281
HindII GTYRAC 1 cut(s) 1281
HindIII AAGCTT 4 cut(s) 355, 472, 574, 1073
HinfI GANTC 3 cut(s) 440, 1101, 1164
HpaI GTTAAC 1 cut(s) 1281
HpaII CCGG 2 cut(s) 872, 889
HphI GGTGA 4 cut(s) 116, 302, 1060, 1418
Hpy166II GTNNAC 6 cut(s) 310, 558, 862, 1281, 1417, 1419
Hpy188I TCNGA 4 cut(s) 25, 498, 753, 1429
Hpy188III TCNNGA 4 cut(s) 59, 187, 706, 1168
Hpy8I GTNNAC 6 cut(s) 310, 558, 862, 1281, 1417, 1419
HpyAV CCTTC 6 cut(s) 169, 228, 625, 778, 1073, 1124
HpyCH4III ACNGT 3 cut(s) 569, 736, 925
HpyF10VI GCNNNNNNNGC 2 cut(s) 471, 908
HpyF3I CTNAG 5 cut(s) 256, 353, 368, 585, 761
Hsp92II CATG 8 cut(s) 133, 164, 380, 396, 611, 1171, 1240, 1305
HspAI GCGC 1 cut(s) 253
Ksp22I TGATCA 2 cut(s) 106, 1015
KspAI GTTAAC 1 cut(s) 1281
Kzo9I GATC 4 cut(s) 106, 334, 1015, 1174
LguI GCTCTTC 1 cut(s) 174
LmnI GCTCC 2 cut(s) 130, 208
Lsp1109I GCAGC 3 cut(s) 313, 895, 898
LweI GCATC 7 cut(s) 29, 489, 645, 667, 676, 1226, 1321
MaeI CTAG 4 cut(s) 29, 968, 1347, 1386
MaeIII GTNAC 3 cut(s) 64, 601, 1252
MalI GATC 4 cut(s) 108, 336, 1017, 1176
MboI GATC 4 cut(s) 106, 334, 1015, 1174
MhlI GDGCHC 3 cut(s) 186, 1440, 1479
MluCI AATT 8 cut(s) 294, 431, 709, 768, 918, 1060, 1134, 1155
MlyI GAGTC 1 cut(s) 1158
MroXI GAANNNNTTC 2 cut(s) 788, 1064
MseI TTAA 9 cut(s) 153, 405, 435, 450, 470, 572, 729, 1139, 1280
MspA1I CMGCKG 1 cut(s) 1010
MspI CCGG 2 cut(s) 872, 889
MspR9I CCNGG 2 cut(s) 504, 889
Mva1269I GAATGC 1 cut(s) 1235
MvaI CCWGG 1 cut(s) 504
MwoI GCNNNNNNNGC 2 cut(s) 471, 908
NciI CCSGG 1 cut(s) 889
NcoI CCATGG 1 cut(s) 129
NdeI CATATG 2 cut(s) 121, 958
NdeII GATC 4 cut(s) 106, 334, 1015, 1174
NlaIII CATG 8 cut(s) 133, 164, 380, 396, 611, 1171, 1240, 1305
NlaIV GGNNCC 2 cut(s) 204, 1352
NmuCI GTSAC 1 cut(s) 1252
NspI RCATGY 1 cut(s) 164
NspV TTCGAA 1 cut(s) 276
PagI TCATGA 1 cut(s) 1167
PceI AGGCCT 2 cut(s) 217, 839
PciI ACATGT 1 cut(s) 160
PciSI GCTCTTC 1 cut(s) 174
PcsI WCGNNNNNNNCGW 1 cut(s) 939
PctI GAATGC 1 cut(s) 1235
PdmI GAANNNNTTC 2 cut(s) 788, 1064
PfeI GAWTC 2 cut(s) 440, 1101
PkrI GCNGC 4 cut(s) 139, 303, 910, 913
PleI GAGTC 1 cut(s) 1158
PpsI GAGTC 1 cut(s) 1158
PscI ACATGT 1 cut(s) 160
PsiI TTATAA 1 cut(s) 384
Psp124BI GAGCTC 1 cut(s) 186
Psp6I CCWGG 1 cut(s) 502
PspGI CCWGG 1 cut(s) 502
PspN4I GGNNCC 2 cut(s) 204, 1352
PspPI GGNCC 1 cut(s) 1350
RsaI GTAC 1 cut(s) 1418
RsaNI GTAC 1 cut(s) 1417
SacI GAGCTC 1 cut(s) 186
SapI GCTCTTC 1 cut(s) 174
SaqAI TTAA 9 cut(s) 153, 405, 435, 450, 470, 572, 729, 1139, 1280
SatI GCNGC 4 cut(s) 138, 302, 909, 912
Sau3AI GATC 4 cut(s) 106, 334, 1015, 1174
Sau96I GGNCC 1 cut(s) 1350
SchI GAGTC 1 cut(s) 1158
ScrFI CCNGG 2 cut(s) 504, 889
SduI GDGCHC 3 cut(s) 186, 1440, 1479
SfaNI GCATC 7 cut(s) 29, 489, 645, 667, 676, 1226, 1321
SfcI CTRYAG 1 cut(s) 558
SfuI TTCGAA 1 cut(s) 276
SmlI CTYRAG 3 cut(s) 185, 551, 1439
SmoI CTYRAG 3 cut(s) 185, 551, 1439
Sse9I AATT 8 cut(s) 294, 431, 709, 768, 918, 1060, 1134, 1155
SseBI AGGCCT 2 cut(s) 217, 839
SsiI CCGC 4 cut(s) 137, 1008, 1111, 1363
SspI AATATT 2 cut(s) 46, 878
SspMI CTAG 4 cut(s) 29, 968, 1347, 1386
SstI GAGCTC 1 cut(s) 186
StuI AGGCCT 2 cut(s) 217, 839
StyD4I CCNGG 2 cut(s) 502, 887
StyI CCWWGG 3 cut(s) 129, 641, 1346
TaaI ACNGT 3 cut(s) 569, 736, 925
TaqI TCGA 7 cut(s) 70, 276, 361, 792, 1275, 1329, 1467
TasI AATT 8 cut(s) 294, 431, 709, 768, 918, 1060, 1134, 1155
TatI WGTACW 1 cut(s) 1416
TauI GCSGC 1 cut(s) 140
TfiI GAWTC 2 cut(s) 440, 1101
Tru1I TTAA 9 cut(s) 153, 405, 435, 450, 470, 572, 729, 1139, 1280
Tru9I TTAA 9 cut(s) 153, 405, 435, 450, 470, 572, 729, 1139, 1280
TscAI CASTG 2 cut(s) 352, 739
TseFI GTSAC 1 cut(s) 1252
TseI GCWGC 3 cut(s) 301, 908, 911
Tsp45I GTSAC 1 cut(s) 1252
TspRI CASTG 2 cut(s) 352, 739
XagI CCTNNNNNAGG 1 cut(s) 629
XapI RAATTY 5 cut(s) 294, 431, 709, 1060, 1134
XceI RCATGY 1 cut(s) 164
XmaJI CCTAGG 1 cut(s) 1346
XmiI GTMKAC 2 cut(s) 557, 861
XmnI GAANNNNTTC 2 cut(s) 788, 1064
XspI CTAG 4 cut(s) 29, 968, 1347, 1386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.