synthase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Terpene_synth | PF01397 | 30 - 203 | 1.3e-53 | Terpene synthase, N-terminal domain |
| Terpene_synth_C | PF03936 | 264 - 361 | 5.1e-42 | Terpene synthase family, metal binding domain |
| Terpene_syn_C_2 | PF19086 | 304 - 362 | 1.1e-13 | Terpene synthase family 2, C-terminal metal binding |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1011 |
| Acc36I | ACCTGC | 2 cut(s) | 148, 200 |
| AciI | CCGC | 2 cut(s) | 64, 206 |
| AcsI | RAATTY | 4 cut(s) | 39, 73, 899, 1080 |
| AcuI | CTGAAG | 1 cut(s) | 1008 |
| AcyI | GRCGYC | 1 cut(s) | 1008 |
| AfaI | GTAC | 3 cut(s) | 341, 848, 961 |
| AflIII | ACRYGT | 1 cut(s) | 657 |
| AjnI | CCWGG | 1 cut(s) | 120 |
| AluBI | AGCT | 5 cut(s) | 474, 707, 766, 814, 932 |
| AluI | AGCT | 5 cut(s) | 474, 707, 766, 814, 932 |
| Alw21I | GWGCWC | 1 cut(s) | 768 |
| Alw26I | GTCTC | 1 cut(s) | 607 |
| Ama87I | CYCGRG | 1 cut(s) | 974 |
| AoxI | GGCC | 1 cut(s) | 142 |
| ApeKI | GCWGC | 4 cut(s) | 154, 250, 587, 1060 |
| ApoI | RAATTY | 4 cut(s) | 39, 73, 899, 1080 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 993 |
| AsuHPI | GGTGA | 4 cut(s) | 344, 518, 529, 539 |
| AsuII | TTCGAA | 3 cut(s) | 276, 873, 966 |
| AvaI | CYCGRG | 1 cut(s) | 974 |
| AxyI | CCTNAGG | 1 cut(s) | 889 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 306, 339 |
| BanII | GRGCYC | 1 cut(s) | 768 |
| Bbv12I | GWGCWC | 1 cut(s) | 768 |
| BbvCI | CCTCAGC | 1 cut(s) | 45 |
| BbvI | GCAGC | 4 cut(s) | 166, 262, 599, 1047 |
| BccI | CCATC | 1 cut(s) | 323 |
| BceAI | ACGGC | 1 cut(s) | 474 |
| BciT130I | CCWGG | 1 cut(s) | 122 |
| BcoDI | GTCTC | 1 cut(s) | 607 |
| BfaI | CTAG | 4 cut(s) | 518, 584, 780, 797 |
| BfuAI | ACCTGC | 2 cut(s) | 148, 200 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 458 |
| BglII | AGATCT | 2 cut(s) | 774, 978 |
| BisI | GCNGC | 5 cut(s) | 155, 207, 251, 588, 1061 |
| BlsI | GCNGC | 5 cut(s) | 156, 208, 252, 589, 1062 |
| Bme1390I | CCNGG | 1 cut(s) | 122 |
| BmeT110I | CYCGRG | 1 cut(s) | 974 |
| BmrFI | CCNGG | 1 cut(s) | 122 |
| BmsI | GCATC | 6 cut(s) | 232, 409, 489, 514, 700, 940 |
| Bpu10I | CCTNAGC | 1 cut(s) | 45 |
| Bpu14I | TTCGAA | 3 cut(s) | 276, 873, 966 |
| BpuEI | CTTGAG | 1 cut(s) | 572 |
| BsaBI | GATNNNNATC | 1 cut(s) | 735 |
| BsaHI | GRCGYC | 1 cut(s) | 1008 |
| BsaI | GGTCTC | 1 cut(s) | 607 |
| BsaJI | CCNNGG | 2 cut(s) | 120, 921 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 101, 131 |
| Bse21I | CCTNAGG | 1 cut(s) | 889 |
| Bse3DI | GCAATG | 1 cut(s) | 252 |
| Bse8I | GATNNNNATC | 1 cut(s) | 735 |
| BseBI | CCWGG | 1 cut(s) | 122 |
| BseDI | CCNNGG | 2 cut(s) | 120, 921 |
| BseGI | GGATG | 6 cut(s) | 196, 334, 392, 504, 577, 943 |
| BseJI | GATNNNNATC | 1 cut(s) | 735 |
| BseMI | GCAATG | 1 cut(s) | 252 |
| BseMII | CTCAG | 2 cut(s) | 59, 903 |
| BseXI | GCAGC | 4 cut(s) | 166, 262, 599, 1047 |
| BshFI | GGCC | 1 cut(s) | 144 |
| BsiHKAI | GWGCWC | 1 cut(s) | 768 |
| BsiHKCI | CYCGRG | 1 cut(s) | 974 |
| BslFI | GGGAC | 1 cut(s) | 1019 |
| BsmAI | GTCTC | 1 cut(s) | 607 |
| BsmFI | GGGAC | 1 cut(s) | 1019 |
| BsnI | GGCC | 1 cut(s) | 144 |
| Bso31I | GGTCTC | 1 cut(s) | 607 |
| BsoBI | CYCGRG | 1 cut(s) | 974 |
| Bsp119I | TTCGAA | 3 cut(s) | 276, 873, 966 |
| Bsp1286I | GDGCHC | 1 cut(s) | 768 |
| Bsp143I | GATC | 3 cut(s) | 97, 774, 978 |
| BspACI | CCGC | 2 cut(s) | 64, 206 |
| BspANI | GGCC | 1 cut(s) | 144 |
| BspCNI | CTCAG | 2 cut(s) | 58, 902 |
| BspHI | TCATGA | 1 cut(s) | 694 |
| BspMI | ACCTGC | 2 cut(s) | 148, 200 |
| BspT104I | TTCGAA | 3 cut(s) | 276, 873, 966 |
| BspTNI | GGTCTC | 1 cut(s) | 607 |
| BsrDI | GCAATG | 1 cut(s) | 252 |
| BssECI | CCNNGG | 2 cut(s) | 120, 921 |
| BssMI | GATC | 3 cut(s) | 97, 774, 978 |
| BssNI | GRCGYC | 1 cut(s) | 1008 |
| BssT1I | CCWWGG | 1 cut(s) | 921 |
| Bst2UI | CCWGG | 1 cut(s) | 122 |
| BstACI | GRCGYC | 1 cut(s) | 1008 |
| BstBI | TTCGAA | 3 cut(s) | 276, 873, 966 |
| BstC8I | GCNNGC | 3 cut(s) | 142, 603, 1058 |
| BstDEI | CTNAG | 5 cut(s) | 45, 368, 494, 607, 889 |
| BstF5I | GGATG | 6 cut(s) | 196, 334, 392, 504, 577, 943 |
| BstKTI | GATC | 3 cut(s) | 100, 777, 981 |
| BstMAI | GTCTC | 1 cut(s) | 607 |
| BstMBI | GATC | 3 cut(s) | 97, 774, 978 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 458 |
| BstNI | CCWGG | 1 cut(s) | 122 |
| BstNSI | RCATGY | 1 cut(s) | 661 |
| BstSCI | CCNGG | 1 cut(s) | 120 |
| BstV1I | GCAGC | 4 cut(s) | 166, 262, 599, 1047 |
| BstX2I | RGATCY | 2 cut(s) | 774, 978 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 90 |
| BstYI | RGATCY | 2 cut(s) | 774, 978 |
| Bsu36I | CCTNAGG | 1 cut(s) | 889 |
| BsuRI | GGCC | 1 cut(s) | 144 |
| BtsCI | GGATG | 6 cut(s) | 196, 334, 392, 504, 577, 943 |
| BtsI | GCAGTG | 1 cut(s) | 1081 |
| BtsIMutI | CAGTG | 1 cut(s) | 1081 |
| BveI | ACCTGC | 2 cut(s) | 148, 200 |
| Cac8I | GCNNGC | 3 cut(s) | 142, 603, 1058 |
| CciI | TCATGA | 1 cut(s) | 694 |
| CseI | GACGC | 1 cut(s) | 242 |
| Csp6I | GTAC | 3 cut(s) | 340, 847, 960 |
| CviAII | CATG | 6 cut(s) | 311, 377, 503, 569, 658, 695 |
| CviQI | GTAC | 3 cut(s) | 340, 847, 960 |
| DdeI | CTNAG | 5 cut(s) | 45, 368, 494, 607, 889 |
| DpnI | GATC | 3 cut(s) | 99, 776, 980 |
| DpnII | GATC | 3 cut(s) | 97, 774, 978 |
| EciI | GGCGGA | 1 cut(s) | 79 |
| Ecl136II | GAGCTC | 1 cut(s) | 766 |
| Eco130I | CCWWGG | 1 cut(s) | 921 |
| Eco24I | GRGCYC | 1 cut(s) | 768 |
| Eco31I | GGTCTC | 1 cut(s) | 607 |
| Eco53kI | GAGCTC | 1 cut(s) | 766 |
| Eco57I | CTGAAG | 1 cut(s) | 1008 |
| Eco81I | CCTNAGG | 1 cut(s) | 889 |
| Eco88I | CYCGRG | 1 cut(s) | 974 |
| EcoICRI | GAGCTC | 1 cut(s) | 766 |
| EcoRII | CCWGG | 1 cut(s) | 120 |
| EcoT14I | CCWWGG | 1 cut(s) | 921 |
| EcoT22I | ATGCAT | 3 cut(s) | 312, 504, 955 |
| EcoT38I | GRGCYC | 1 cut(s) | 768 |
| ErhI | CCWWGG | 1 cut(s) | 921 |
| FaeI | CATG | 6 cut(s) | 314, 380, 506, 572, 661, 698 |
| FaqI | GGGAC | 1 cut(s) | 1019 |
| FatI | CATG | 6 cut(s) | 310, 376, 502, 568, 657, 694 |
| FauNDI | CATATG | 3 cut(s) | 306, 319, 955 |
| Fnu4HI | GCNGC | 5 cut(s) | 155, 207, 251, 588, 1061 |
| FokI | GGATG | 6 cut(s) | 203, 341, 379, 511, 564, 950 |
| FriOI | GRGCYC | 1 cut(s) | 768 |
| Fsp4HI | GCNGC | 5 cut(s) | 155, 207, 251, 588, 1061 |
| FspBI | CTAG | 4 cut(s) | 518, 584, 780, 797 |
| GluI | GCNGC | 5 cut(s) | 155, 207, 251, 588, 1061 |
| HaeIII | GGCC | 1 cut(s) | 144 |
| HgaI | GACGC | 1 cut(s) | 242 |
| Hin1I | GRCGYC | 1 cut(s) | 1008 |
| Hin1II | CATG | 6 cut(s) | 314, 380, 506, 572, 661, 698 |
| HincII | GTYRAC | 1 cut(s) | 163 |
| HindII | GTYRAC | 1 cut(s) | 163 |
| HindIII | AAGCTT | 1 cut(s) | 472 |
| HinfI | GANTC | 2 cut(s) | 554, 1091 |
| HphI | GGTGA | 4 cut(s) | 344, 518, 529, 539 |
| Hpy166II | GTNNAC | 1 cut(s) | 163 |
| Hpy188I | TCNGA | 3 cut(s) | 11, 200, 397 |
| Hpy188III | TCNNGA | 5 cut(s) | 184, 326, 632, 695, 976 |
| Hpy8I | GTNNAC | 1 cut(s) | 163 |
| HpyAV | CCTTC | 1 cut(s) | 434 |
| HpyCH4IV | ACGT | 1 cut(s) | 1008 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 458 |
| HpyF3I | CTNAG | 5 cut(s) | 45, 368, 494, 607, 889 |
| HpySE526I | ACGT | 1 cut(s) | 1008 |
| Hsp92I | GRCGYC | 1 cut(s) | 1008 |
| Hsp92II | CATG | 6 cut(s) | 314, 380, 506, 572, 661, 698 |
| Kzo9I | GATC | 3 cut(s) | 97, 774, 978 |
| LmnI | GCTCC | 2 cut(s) | 763, 811 |
| Lsp1109I | GCAGC | 4 cut(s) | 166, 262, 599, 1047 |
| LweI | GCATC | 6 cut(s) | 232, 409, 489, 514, 700, 940 |
| MaeI | CTAG | 4 cut(s) | 518, 584, 780, 797 |
| MaeII | ACGT | 1 cut(s) | 1008 |
| MaeIII | GTNAC | 2 cut(s) | 428, 653 |
| MalI | GATC | 3 cut(s) | 99, 776, 980 |
| MboI | GATC | 3 cut(s) | 97, 774, 978 |
| MboII | GAAGA | 4 cut(s) | 521, 533, 980, 1054 |
| MfeI | CAATTG | 2 cut(s) | 237, 1012 |
| MflI | RGATCY | 2 cut(s) | 774, 978 |
| MhlI | GDGCHC | 1 cut(s) | 768 |
| MlyI | GAGTC | 1 cut(s) | 563 |
| MnlI | CCTC | 5 cut(s) | 54, 127, 180, 627, 898 |
| Mph1103I | ATGCAT | 3 cut(s) | 312, 504, 955 |
| MroXI | GAANNNNTTC | 1 cut(s) | 993 |
| MseI | TTAA | 3 cut(s) | 108, 446, 470 |
| MslI | CAYNNNNRTG | 1 cut(s) | 309 |
| MspR9I | CCNGG | 1 cut(s) | 122 |
| MunI | CAATTG | 2 cut(s) | 237, 1012 |
| MvaI | CCWGG | 1 cut(s) | 122 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 458 |
| NdeI | CATATG | 3 cut(s) | 306, 319, 955 |
| NdeII | GATC | 3 cut(s) | 97, 774, 978 |
| NlaIII | CATG | 6 cut(s) | 314, 380, 506, 572, 661, 698 |
| NsiI | ATGCAT | 3 cut(s) | 312, 504, 955 |
| NspI | RCATGY | 1 cut(s) | 661 |
| NspV | TTCGAA | 3 cut(s) | 276, 873, 966 |
| PaeR7I | CTCGAG | 1 cut(s) | 974 |
| PagI | TCATGA | 1 cut(s) | 694 |
| PciI | ACATGT | 1 cut(s) | 657 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 972 |
| PdmI | GAANNNNTTC | 1 cut(s) | 993 |
| PkrI | GCNGC | 5 cut(s) | 156, 208, 252, 589, 1062 |
| PleI | GAGTC | 1 cut(s) | 562 |
| PpsI | GAGTC | 1 cut(s) | 562 |
| PscI | ACATGT | 1 cut(s) | 657 |
| Psp124BI | GAGCTC | 1 cut(s) | 768 |
| Psp6I | CCWGG | 1 cut(s) | 120 |
| PspGI | CCWGG | 1 cut(s) | 120 |
| PsuI | RGATCY | 2 cut(s) | 774, 978 |
| RsaI | GTAC | 3 cut(s) | 341, 848, 961 |
| RsaNI | GTAC | 3 cut(s) | 340, 847, 960 |
| RseI | CAYNNNNRTG | 1 cut(s) | 309 |
| SacI | GAGCTC | 1 cut(s) | 768 |
| SaqAI | TTAA | 3 cut(s) | 108, 446, 470 |
| SatI | GCNGC | 5 cut(s) | 155, 207, 251, 588, 1061 |
| Sau3AI | GATC | 3 cut(s) | 97, 774, 978 |
| SchI | GAGTC | 1 cut(s) | 563 |
| ScrFI | CCNGG | 1 cut(s) | 122 |
| SduI | GDGCHC | 1 cut(s) | 768 |
| SfaNI | GCATC | 6 cut(s) | 232, 409, 489, 514, 700, 940 |
| Sfr274I | CTCGAG | 1 cut(s) | 974 |
| SfuI | TTCGAA | 3 cut(s) | 276, 873, 966 |
| SlaI | CTCGAG | 1 cut(s) | 974 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 309 |
| SmlI | CTYRAG | 2 cut(s) | 551, 974 |
| SmoI | CTYRAG | 2 cut(s) | 551, 974 |
| SsiI | CCGC | 2 cut(s) | 64, 206 |
| SspI | AATATT | 1 cut(s) | 1069 |
| SspMI | CTAG | 4 cut(s) | 518, 584, 780, 797 |
| SstI | GAGCTC | 1 cut(s) | 768 |
| StyD4I | CCNGG | 1 cut(s) | 120 |
| StyI | CCWWGG | 1 cut(s) | 921 |
| TaiI | ACGT | 1 cut(s) | 1011 |
| TaqI | TCGA | 4 cut(s) | 276, 873, 966, 975 |
| TatI | WGTACW | 1 cut(s) | 846 |
| TauI | GCSGC | 1 cut(s) | 209 |
| Tru1I | TTAA | 3 cut(s) | 108, 446, 470 |
| Tru9I | TTAA | 3 cut(s) | 108, 446, 470 |
| TscAI | CASTG | 1 cut(s) | 1081 |
| TseI | GCWGC | 4 cut(s) | 154, 250, 587, 1060 |
| TspDTI | ATGAA | 7 cut(s) | 94, 245, 381, 495, 711, 1038, 1055 |
| TspRI | CASTG | 1 cut(s) | 1081 |
| XapI | RAATTY | 4 cut(s) | 39, 73, 899, 1080 |
| XceI | RCATGY | 1 cut(s) | 661 |
| XhoI | CTCGAG | 1 cut(s) | 974 |
| XmnI | GAANNNNTTC | 1 cut(s) | 993 |
| XspI | CTAG | 4 cut(s) | 518, 584, 780, 797 |
| ZraI | GACGTC | 1 cut(s) | 1009 |
| Zsp2I | ATGCAT | 3 cut(s) | 312, 504, 955 |