RchiOBHm_Chr7g0228501

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000053
Physical Location & Seq
Reverse (-)
51841208 .. 51843895
2688 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20470

Sequence Viewer

Length: 1620 bp
ATGTCTGCTAAATTAGTTTCAGCATACCAACCTGAAACCCCAAATGCCAGGAGTACTCCTGATGCTAATAGACGTTCGGCTAATTTTCCTCCCAGCATTTGGGGCGATCATTTTCTTTCATATGCTTCTAGGGAAACTGCAAGCAATGGAAACGAGCAACGGGTCCGAGAATTGAAGGAAGAAGTGAAGAGCGTGCTTCTAATGGCTCCAACTTCACAAAAATTAAATTTAATTGATGATATTCAACGCTTAGGAGTGTCCTACCATTTTGAAAATGAGATTGACCAAATGCTACAGAAAATTCACAACTCTTCCTATGATGACCAAGAAAATAATGATGCTGATAAGGAACTTTACACAGTTGCTCTACGTTTTCGATTGCTTAGACAAACAGGTTTTGAGGTTTCATGCAGTAAGACACATGGAGAGGATATACTAGAAGAAGCCCTGGCCTTCACTACCACTCATCTTGAGTTGGCACTAGCTGCTACACAGGGTGGTCTAAGTCCCCCACTTTTAAAACGAGTAACTCATGCGCTATACCAGCCACTGTGGAAGGGCGACCCAAGGCTAGAAGCAAGGCGCTACTTGTCTTTCTACCAGGAACTAAAAAGTTCATATATCAATGAAACGCTCCTGACTTTTGCGAAGTTGGATTTCAATCAATTGCAGCGAGTCTATCAGAAAGAACTAAGTCATATCACAAGGTGGTGGAAGGAGCTGGATTTTGTGAACAAACTGCCTTTTGCAAGAGATAGACTAGTTGAAAGCTACTATTGGGCTTTAGGAGTCTACTTTGAGCCCGAATATTGCTTTGGTAGGATGACTATGTGCAAAATCGTCGCCATAATCGTGGTTCTTGATGACGTTTATGATGTGCATGGCACACATAAAGAATTAGAGCTTTTTATTGAAGCTGTTGAGAGGTGGGACATCTCTGCATTGGATCTGCTACCTGTAGATTACATGAAAATCTGTTACCAGGCACTCTTGGACATCTACGCTGATATTGAAAATGAGCTTGCGAAGGAGGGGAAGTTGTATCGCATCCACTATGCCAGAGAATCAATGAAAGTTCAAGTCAGATCTTGGTTTCAAGAAGCCAAATGGTTCCATGAGAAATACACTCCAACGTTGGATGAATATATGTCGGCCGCTCTTTCCACAACCTATTTCATGATGGCAGCCACATCCTTTGTTTTAATGGCTGGAGATATTGTCACAAAAAATTCCTTGGACTGGGTGTTCACCGACCCAAAGATGGTAAAGGCTTCATCAACAATAGGCAGACTCATGGATGACTTGCAATCCCACAAGTTTGAGCAAAAGAGAGGACATGTTGCCTCAGCTATTGAATGCTACATGAAAGAACATTGTGCCACAGAAGAAGAAGCAACAATCGAACTTACTAAACAAGTGAATAATGCATGGAAAGACATGAATGAAGGATGGCTCAACTCCGCCGGTGCTGCTAATGTCCCTAGGGCACTATTACTGTGCATTATCAACCTTGCACGTGTGATCGAAGTTATATATAAGCATGAAGATGGATTCACTCATGCTGAAACAGGGCTTAAGGATATTATAACGTCTCTGCTTGTCGAACCTGTACCTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

539

Amino Acids

62.16

Weight (kDa)

5.43

Isoelectric Point (pI)

46.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 33 - 138 8.2e-30 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 239 - 479 1.9e-95 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 279 - 479 2.1e-55 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1586
AccB7I CCANNNNNTGG 1 cut(s) 99
AccBSI CCGCTC 1 cut(s) 1157
AccI GTMKAC 1 cut(s) 792
AciI CCGC 2 cut(s) 1155, 1461
AclI AACGTT 1 cut(s) 1133
AclWI GGATC 1 cut(s) 954
AcoI YGGCCR 1 cut(s) 1152
AcsI RAATTY 3 cut(s) 226, 300, 1228
AcvI CACGTG 1 cut(s) 1517
AdeI CACNNNGTG 2 cut(s) 497, 708
AfaI GTAC 2 cut(s) 55, 1611
AfiI CCNNNNNNNGG 3 cut(s) 99, 1239, 1261
AflII CTTAAG 1 cut(s) 1574
AflIII ACRYGT 2 cut(s) 1336, 1516
AhlI ACTAGT 1 cut(s) 760
AjnI CCWGG 4 cut(s) 47, 447, 600, 981
AjuI GAANNNNNNNTTGG 2 cut(s) 798, 830
AloI GAACNNNNNNTCC 2 cut(s) 1229, 1261
AluBI AGCT 7 cut(s) 485, 721, 771, 904, 917, 1021, 1349
AluI AGCT 7 cut(s) 485, 721, 771, 904, 917, 1021, 1349
Alw26I GTCTC 1 cut(s) 1596
AlwI GGATC 1 cut(s) 954
AlwNI CAGNNNCTG 1 cut(s) 550
AoxI GGCC 2 cut(s) 450, 1152
ApeKI GCWGC 4 cut(s) 485, 670, 1184, 1469
ApoI RAATTY 3 cut(s) 226, 300, 1228
AspA2I CCTAGG 1 cut(s) 1481
AspLEI GCGC 2 cut(s) 538, 585
AspS9I GGNCC 1 cut(s) 163
AsuHPI GGTGA 1 cut(s) 1240
AvaII GGWCC 1 cut(s) 163
AvrII CCTAGG 1 cut(s) 1481
BaeGI GKGCMC 1 cut(s) 1489
BanII GRGCYC 1 cut(s) 804
BbrPI CACGTG 1 cut(s) 1517
BbvCI CCTCAGC 1 cut(s) 1345
BbvI GCAGC 4 cut(s) 472, 682, 1196, 1456
BccI CCATC 4 cut(s) 1174, 1255, 1443, 1541
BcgI CGANNNNNNTGC 2 cut(s) 823, 857
BciT130I CCWGG 4 cut(s) 49, 449, 602, 983
BcoDI GTCTC 1 cut(s) 1596
BcuI ACTAGT 1 cut(s) 760
BfaI CTAG 6 cut(s) 129, 437, 482, 572, 761, 1482
BfmI CTRYAG 2 cut(s) 293, 957
BfoI RGCGCY 1 cut(s) 586
BfrI CTTAAG 1 cut(s) 1574
BglII AGATCT 1 cut(s) 1085
BisI GCNGC 5 cut(s) 486, 671, 1155, 1185, 1470
BlnI CCTAGG 1 cut(s) 1481
BlsI GCNGC 5 cut(s) 487, 672, 1156, 1186, 1471
BmcAI AGTACT 1 cut(s) 55
Bme1390I CCNGG 4 cut(s) 49, 449, 602, 983
Bme18I GGWCC 1 cut(s) 163
BmgT120I GGNCC 1 cut(s) 163
BmiI GGNNCC 3 cut(s) 164, 207, 1112
BmrFI CCNGG 4 cut(s) 49, 449, 602, 983
BmrI ACTGGG 1 cut(s) 1249
BmsI GCATC 3 cut(s) 52, 328, 1056
BmuI ACTGGG 1 cut(s) 1249
BpmI CTGGAG 1 cut(s) 1230
Bpu10I CCTNAGC 2 cut(s) 250, 1345
BpuEI CTTGAG 1 cut(s) 491
BsaAI YACGTR 1 cut(s) 1517
BsaBI GATNNNNATC 1 cut(s) 660
BsaJI CCNNGG 4 cut(s) 447, 566, 1233, 1481
BsaXI ACNNNNNCTCC 4 cut(s) 1022, 1052, 1203, 1233
Bsc4I CCNNNNNNNGG 3 cut(s) 99, 1239, 1261
Bse118I RCCGGY 1 cut(s) 1463
Bse1I ACTGG 1 cut(s) 1244
Bse3DI GCAATG 1 cut(s) 151
Bse8I GATNNNNATC 1 cut(s) 660
BseBI CCWGG 4 cut(s) 49, 449, 602, 983
BseDI CCNNGG 4 cut(s) 447, 566, 1233, 1481
BseGI GGATG 6 cut(s) 828, 1047, 1144, 1190, 1303, 1454
BseJI GATNNNNATC 1 cut(s) 660
BseLI CCNNNNNNNGG 3 cut(s) 99, 1239, 1261
BseMI GCAATG 1 cut(s) 151
BseMII CTCAG 1 cut(s) 1359
BseNI ACTGG 1 cut(s) 1244
BseSI GKGCMC 1 cut(s) 1489
BseX3I CGGCCG 1 cut(s) 1152
BseXI GCAGC 4 cut(s) 472, 682, 1196, 1456
BseYI CCCAGC 1 cut(s) 92
Bsh1285I CGRYCG 1 cut(s) 1155
BshFI GGCC 2 cut(s) 452, 1154
BsiEI CGRYCG 1 cut(s) 1155
BsiSI CCGG 1 cut(s) 1464
BslFI GGGAC 3 cut(s) 492, 944, 1463
BslI CCNNNNNNNGG 3 cut(s) 99, 1239, 1261
BsmAI GTCTC 1 cut(s) 1596
BsmBI CGTCTC 1 cut(s) 1596
BsmFI GGGAC 3 cut(s) 492, 944, 1463
BsmI GAATGC 1 cut(s) 1361
BsnI GGCC 2 cut(s) 452, 1154
Bsp1286I GDGCHC 2 cut(s) 804, 1489
Bsp143I GATC 4 cut(s) 106, 946, 1085, 1521
BspACI CCGC 2 cut(s) 1155, 1461
BspANI GGCC 2 cut(s) 452, 1154
BspCNI CTCAG 1 cut(s) 1358
BspHI TCATGA 1 cut(s) 1176
BspLI GGNNCC 3 cut(s) 164, 207, 1112
BspPI GGATC 1 cut(s) 954
BspQI GCTCTTC 1 cut(s) 182
BspTI CTTAAG 1 cut(s) 1574
BsrBI CCGCTC 1 cut(s) 1157
BsrDI GCAATG 1 cut(s) 151
BsrFI RCCGGY 1 cut(s) 1463
BsrI ACTGG 1 cut(s) 1244
BssAI RCCGGY 1 cut(s) 1463
BssECI CCNNGG 4 cut(s) 447, 566, 1233, 1481
BssMI GATC 4 cut(s) 106, 946, 1085, 1521
BssT1I CCWWGG 3 cut(s) 566, 1233, 1481
Bst2UI CCWGG 4 cut(s) 49, 449, 602, 983
Bst4CI ACNGT 3 cut(s) 361, 552, 1497
Bst6I CTCTTC 2 cut(s) 182, 316
BstAFI CTTAAG 1 cut(s) 1574
BstAPI GCANNNNNTGC 1 cut(s) 485
BstBAI YACGTR 1 cut(s) 1517
BstC8I GCNNGC 3 cut(s) 142, 194, 1023
BstDEI CTNAG 5 cut(s) 250, 383, 503, 692, 1345
BstF5I GGATG 6 cut(s) 828, 1047, 1144, 1190, 1303, 1454
BstH2I RGCGCY 1 cut(s) 586
BstHHI GCGC 2 cut(s) 538, 585
BstKTI GATC 4 cut(s) 109, 949, 1088, 1524
BstMAI GTCTC 1 cut(s) 1596
BstMBI GATC 4 cut(s) 106, 946, 1085, 1521
BstMCI CGRYCG 1 cut(s) 1155
BstMWI GCNNNNNNNGC 4 cut(s) 102, 485, 544, 1469
BstNI CCWGG 4 cut(s) 49, 449, 602, 983
BstNSI RCATGY 1 cut(s) 1340
BstSCI CCNGG 4 cut(s) 47, 447, 600, 981
BstSFI CTRYAG 2 cut(s) 293, 957
BstSLI GKGCMC 1 cut(s) 1489
BstV1I GCAGC 4 cut(s) 472, 682, 1196, 1456
BstX2I RGATCY 2 cut(s) 946, 1085
BstXI CCANNNNNNTGG 1 cut(s) 853
BstYI RGATCY 2 cut(s) 946, 1085
BstZI CGGCCG 1 cut(s) 1152
BsuRI GGCC 2 cut(s) 452, 1154
BtsCI GGATG 6 cut(s) 828, 1047, 1144, 1190, 1303, 1454
BtsIMutI CAGTG 1 cut(s) 548
Cac8I GCNNGC 3 cut(s) 142, 194, 1023
CaiI CAGNNNCTG 1 cut(s) 550
CciI TCATGA 1 cut(s) 1176
CfoI GCGC 2 cut(s) 538, 585
Cfr10I RCCGGY 1 cut(s) 1463
Cfr13I GGNCC 1 cut(s) 163
Csp6I GTAC 2 cut(s) 54, 1610
CspCI CAANNNNNGTGG 4 cut(s) 451, 486, 1177, 1212
CviQI GTAC 2 cut(s) 54, 1610
DdeI CTNAG 5 cut(s) 250, 383, 503, 692, 1345
DpnI GATC 4 cut(s) 108, 948, 1087, 1523
DpnII GATC 4 cut(s) 106, 946, 1085, 1521
DraI TTTAAA 1 cut(s) 519
DraIII CACNNNGTG 2 cut(s) 497, 708
EaeI YGGCCR 1 cut(s) 1152
EagI CGGCCG 1 cut(s) 1152
Eam1104I CTCTTC 2 cut(s) 182, 316
EarI CTCTTC 2 cut(s) 182, 316
EciI GGCGGA 1 cut(s) 1450
EclXI CGGCCG 1 cut(s) 1152
Eco130I CCWWGG 3 cut(s) 566, 1233, 1481
Eco24I GRGCYC 1 cut(s) 804
Eco47I GGWCC 1 cut(s) 163
Eco52I CGGCCG 1 cut(s) 1152
Eco72I CACGTG 1 cut(s) 1517
EcoRII CCWGG 4 cut(s) 47, 447, 600, 981
EcoT14I CCWWGG 3 cut(s) 566, 1233, 1481
EcoT22I ATGCAT 1 cut(s) 1429
EcoT38I GRGCYC 1 cut(s) 804
ErhI CCWWGG 3 cut(s) 566, 1233, 1481
Esp3I CGTCTC 1 cut(s) 1596
FaqI GGGAC 3 cut(s) 492, 944, 1463
FauNDI CATATG 1 cut(s) 121
FblI GTMKAC 1 cut(s) 792
Fnu4HI GCNGC 5 cut(s) 486, 671, 1155, 1185, 1470
FokI GGATG 6 cut(s) 835, 1034, 1151, 1177, 1310, 1461
FriOI GRGCYC 1 cut(s) 804
Fsp4HI GCNGC 5 cut(s) 486, 671, 1155, 1185, 1470
FspBI CTAG 6 cut(s) 129, 437, 482, 572, 761, 1482
GlaI GCGC 2 cut(s) 537, 584
GluI GCNGC 5 cut(s) 486, 671, 1155, 1185, 1470
GsaI CCCAGC 1 cut(s) 96
GsuI CTGGAG 1 cut(s) 1230
HaeII RGCGCY 1 cut(s) 586
HaeIII GGCC 2 cut(s) 452, 1154
HapII CCGG 1 cut(s) 1464
HhaI GCGC 2 cut(s) 538, 585
Hin6I GCGC 2 cut(s) 536, 583
HinP1I GCGC 2 cut(s) 536, 583
HinfI GANTC 5 cut(s) 675, 789, 1064, 1290, 1551
HpaII CCGG 1 cut(s) 1464
HphI GGTGA 1 cut(s) 1240
Hpy166II GTNNAC 3 cut(s) 733, 793, 1248
Hpy188I TCNGA 3 cut(s) 167, 684, 1085
Hpy188III TCNNGA 6 cut(s) 59, 470, 637, 860, 1097, 1177
Hpy8I GTNNAC 3 cut(s) 733, 793, 1248
Hpy99I CGWCG 1 cut(s) 845
HpyAV CCTTC 6 cut(s) 169, 463, 550, 709, 1021, 1439
HpyCH4III ACNGT 3 cut(s) 361, 552, 1497
HpyCH4IV ACGT 6 cut(s) 73, 370, 867, 1133, 1516, 1589
HpyF10VI GCNNNNNNNGC 4 cut(s) 102, 485, 544, 1469
HpyF3I CTNAG 5 cut(s) 250, 383, 503, 692, 1345
HpySE526I ACGT 6 cut(s) 73, 370, 867, 1133, 1516, 1589
HspAI GCGC 2 cut(s) 536, 583
Kzo9I GATC 4 cut(s) 106, 946, 1085, 1521
LguI GCTCTTC 1 cut(s) 182
LmnI GCTCC 3 cut(s) 211, 639, 718
Lsp1109I GCAGC 4 cut(s) 472, 682, 1196, 1456
LweI GCATC 3 cut(s) 52, 328, 1056
MaeI CTAG 6 cut(s) 129, 437, 482, 572, 761, 1482
MaeII ACGT 6 cut(s) 73, 370, 867, 1133, 1516, 1589
MaeIII GTNAC 3 cut(s) 526, 977, 1219
MalI GATC 4 cut(s) 108, 948, 1087, 1523
MbiI CCGCTC 1 cut(s) 1157
MboI GATC 4 cut(s) 106, 946, 1085, 1521
MboII GAAGA 7 cut(s) 191, 199, 303, 452, 1397, 1400, 1556
MfeI CAATTG 1 cut(s) 665
MflI RGATCY 2 cut(s) 946, 1085
MhlI GDGCHC 2 cut(s) 804, 1489
MlyI GAGTC 3 cut(s) 684, 798, 1284
MmeI TCCRAC 4 cut(s) 233, 633, 1116, 1154
MnlI CCTC 7 cut(s) 99, 394, 421, 918, 1024, 1325, 1354
Mph1103I ATGCAT 1 cut(s) 1429
MseI TTAA 5 cut(s) 224, 230, 518, 1202, 1575
MslI CAYNNNNRTG 2 cut(s) 851, 1545
MspCI CTTAAG 1 cut(s) 1574
MspI CCGG 1 cut(s) 1464
MspR9I CCNGG 4 cut(s) 49, 449, 602, 983
MunI CAATTG 1 cut(s) 665
Mva1269I GAATGC 1 cut(s) 1361
MvaI CCWGG 4 cut(s) 49, 449, 602, 983
MwoI GCNNNNNNNGC 4 cut(s) 102, 485, 544, 1469
NdeI CATATG 1 cut(s) 121
NdeII GATC 4 cut(s) 106, 946, 1085, 1521
NlaIV GGNNCC 3 cut(s) 164, 207, 1112
NmuCI GTSAC 1 cut(s) 1219
NsiI ATGCAT 1 cut(s) 1429
NspI RCATGY 1 cut(s) 1340
PagI TCATGA 1 cut(s) 1176
PciI ACATGT 1 cut(s) 1336
PciSI GCTCTTC 1 cut(s) 182
PcsI WCGNNNNNNNCGW 1 cut(s) 849
PctI GAATGC 1 cut(s) 1361
PfeI GAWTC 2 cut(s) 1064, 1551
PflMI CCANNNNNTGG 1 cut(s) 99
PkrI GCNGC 5 cut(s) 487, 672, 1156, 1186, 1471
PleI GAGTC 3 cut(s) 683, 797, 1284
PmaCI CACGTG 1 cut(s) 1517
PmlI CACGTG 1 cut(s) 1517
PpsI GAGTC 3 cut(s) 683, 797, 1284
Ppu21I YACGTR 1 cut(s) 1517
PscI ACATGT 1 cut(s) 1336
PsiI TTATAA 1 cut(s) 1586
Psp1406I AACGTT 1 cut(s) 1133
Psp6I CCWGG 4 cut(s) 47, 447, 600, 981
PspCI CACGTG 1 cut(s) 1517
PspFI CCCAGC 1 cut(s) 92
PspGI CCWGG 4 cut(s) 47, 447, 600, 981
PspN4I GGNNCC 3 cut(s) 164, 207, 1112
PspPI GGNCC 1 cut(s) 163
PstNI CAGNNNCTG 1 cut(s) 550
PsuI RGATCY 2 cut(s) 946, 1085
RsaI GTAC 2 cut(s) 55, 1611
RsaNI GTAC 2 cut(s) 54, 1610
RseI CAYNNNNRTG 2 cut(s) 851, 1545
SapI GCTCTTC 1 cut(s) 182
SaqAI TTAA 5 cut(s) 224, 230, 518, 1202, 1575
SatI GCNGC 5 cut(s) 486, 671, 1155, 1185, 1470
Sau3AI GATC 4 cut(s) 106, 946, 1085, 1521
Sau96I GGNCC 1 cut(s) 163
ScaI AGTACT 1 cut(s) 55
SchI GAGTC 3 cut(s) 684, 798, 1284
ScrFI CCNGG 4 cut(s) 49, 449, 602, 983
SduI GDGCHC 2 cut(s) 804, 1489
SfaNI GCATC 3 cut(s) 52, 328, 1056
SfcI CTRYAG 2 cut(s) 293, 957
SgrAI CRCCGGYG 1 cut(s) 1463
SinI GGWCC 1 cut(s) 163
SmiMI CAYNNNNRTG 2 cut(s) 851, 1545
SmlI CTYRAG 2 cut(s) 470, 1574
SmoI CTYRAG 2 cut(s) 470, 1574
SpeI ACTAGT 1 cut(s) 760
SsiI CCGC 2 cut(s) 1155, 1461
SspI AATATT 1 cut(s) 809
SspMI CTAG 6 cut(s) 129, 437, 482, 572, 761, 1482
StyD4I CCNGG 4 cut(s) 47, 447, 600, 981
StyI CCWWGG 3 cut(s) 566, 1233, 1481
TaaI ACNGT 3 cut(s) 361, 552, 1497
TaiI ACGT 6 cut(s) 76, 373, 870, 1136, 1519, 1592
TaqI TCGA 4 cut(s) 376, 1401, 1524, 1602
TatI WGTACW 1 cut(s) 53
TauI GCSGC 1 cut(s) 1157
TfiI GAWTC 2 cut(s) 1064, 1551
Tru1I TTAA 5 cut(s) 224, 230, 518, 1202, 1575
Tru9I TTAA 5 cut(s) 224, 230, 518, 1202, 1575
TscAI CASTG 1 cut(s) 555
TseFI GTSAC 1 cut(s) 1219
TseI GCWGC 4 cut(s) 485, 670, 1184, 1469
Tsp45I GTSAC 1 cut(s) 1219
TspRI CASTG 1 cut(s) 555
Van91I CCANNNNNTGG 1 cut(s) 99
Vha464I CTTAAG 1 cut(s) 1574
VpaK11BI GGWCC 1 cut(s) 163
XapI RAATTY 3 cut(s) 226, 300, 1228
XceI RCATGY 1 cut(s) 1340
XmaJI CCTAGG 1 cut(s) 1481
XmiI GTMKAC 1 cut(s) 792
XspI CTAG 6 cut(s) 129, 437, 482, 572, 761, 1482
ZrmI AGTACT 1 cut(s) 55
Zsp2I ATGCAT 1 cut(s) 1429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.