Rorug06G0055600

(-)-alpha-pinene synthase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
7636763 .. 7638676
1914 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0055600.1

Sequence Viewer

Length: 738 bp
ATGGCCTTGCAGGCTCTCAACTCCCCAAACACCGCCTCTCTCGGCGGCTTCGAAGACGAGCCTAACCGCAACATGAACCACCACCTCGCCGCGAAACGTAAGCGCTCCAAGAGGCCTCGCTTCGAGGACTCGCTTTCCGAAGAGGAGTACATGGCTTTCTGTCTTCTCTTGCTCGCTCGTGGCGGCACCACCAACGCCACCGACACCACCGCTACAGCCGCCCAACTGCCGCCGCATCCCCCGGCTGCTTCTTACAGGTGTGTTGTCTGCAGCAAGACTTTCGGCTCCTACCAGGCTCTTGGGGGCCACAAGGCTAGCCACCGTAAGTCTGACGCCACCTCCGCCGCCGTAGCCGCCACCGTCAAGACTGAAATCCCGGCTGTCACCGCCGCGAGTGGTGGGAGGACCCACGAGTGCTCCATCTGCCACAAGTGCTTCCCGACCGGGCAGGCCTTGGGAGGACACAAGCGCTGCCACTACGACGGTGGCAGCAGCACCGCCAACAGCGCCGTCACGACGGTTTCCGAAGGCGGCGGTGGATCCTCCAGCCACGGCCAGAGCCAGACTCAGAGCCAGCGTGGGTTCGTACTGGACCTGAACTTGCCTGCTGAGCCGGAAGTGCTACAAGTGTGGACCGGGTTCGACAAGAAGAAGAGTACTCAAGCCTCCGCCGAGCAGGAGGAGGTGCAGAGTCCGATGCCGGAGAAGAAGCCACGTCTGACATTGGGGCCTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

245

Amino Acids

25.92

Weight (kDa)

8.46

Isoelectric Point (pI)

67.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_6 PF13912 85 - 110 2e-12 C2H2-type zinc finger
zf-C2H2_6 PF13912 137 - 161 4.6e-10 C2H2-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 185
AccII CGCG 2 cut(s) 92, 392
AclWI GGATC 2 cut(s) 534, 547
AcoI YGGCCR 1 cut(s) 553
AcyI GRCGYC 1 cut(s) 333
AfaI GTAC 3 cut(s) 149, 588, 658
AfeI AGCGCT 2 cut(s) 104, 470
AjiI CACGTC 1 cut(s) 716
AjnI CCWGG 1 cut(s) 291
Alw21I GWGCWC 1 cut(s) 419
AlwI GGATC 2 cut(s) 534, 547
Aor51HI AGCGCT 2 cut(s) 104, 470
AoxI GGCC 6 cut(s) 3, 113, 304, 450, 553, 728
ApeKI GCWGC 5 cut(s) 245, 270, 471, 489, 492
AspLEI GCGC 3 cut(s) 105, 471, 509
AspS9I GGNCC 5 cut(s) 304, 405, 592, 633, 728
AsuC2I CCSGG 4 cut(s) 242, 377, 445, 637
AsuHPI GGTGA 1 cut(s) 376
AsuII TTCGAA 1 cut(s) 51
AsuNHI GCTAGC 1 cut(s) 314
AvaII GGWCC 3 cut(s) 405, 592, 633
BamHI GGATCC 1 cut(s) 539
BanI GGYRCC 1 cut(s) 185
BauI CACGAG 2 cut(s) 177, 410
BbsI GAAGAC 2 cut(s) 60, 155
Bbv12I GWGCWC 1 cut(s) 419
BbvI GCAGC 5 cut(s) 232, 282, 458, 501, 504
BccI CCATC 1 cut(s) 428
BceAI ACGGC 3 cut(s) 332, 494, 568
BcgI CGANNNNNNTGC 2 cut(s) 262, 296
BciT130I CCWGG 1 cut(s) 293
BcnI CCSGG 4 cut(s) 242, 377, 445, 637
BfaI CTAG 1 cut(s) 315
BfmI CTRYAG 2 cut(s) 213, 268
BfoI RGCGCY 3 cut(s) 106, 472, 510
BglI GCCNNNNNGGC 1 cut(s) 11
BlpI GCTNAGC 1 cut(s) 609
BmcAI AGTACT 1 cut(s) 658
Bme1390I CCNGG 5 cut(s) 242, 293, 377, 445, 637
Bme18I GGWCC 3 cut(s) 405, 592, 633
BmgBI CACGTC 1 cut(s) 716
BmgT120I GGNCC 5 cut(s) 304, 405, 592, 633, 728
BmiI GGNNCC 6 cut(s) 187, 286, 305, 407, 541, 729
BmrFI CCNGG 5 cut(s) 242, 293, 377, 445, 637
BmsI GCATC 2 cut(s) 244, 687
BmtI GCTAGC 1 cut(s) 318
BpiI GAAGAC 2 cut(s) 60, 155
BplI GAGNNNNNCTC 2 cut(s) 550, 582
BpmI CTGGAG 1 cut(s) 529
Bpu1102I GCTNAGC 1 cut(s) 609
Bpu14I TTCGAA 1 cut(s) 51
BpuEI CTTGAG 1 cut(s) 645
BpuMI CCSGG 4 cut(s) 242, 377, 445, 637
BsaHI GRCGYC 1 cut(s) 333
BsaJI CCNNGG 3 cut(s) 240, 453, 550
BsaXI ACNNNNNCTCC 4 cut(s) 323, 353, 401, 431
Bse1I ACTGG 1 cut(s) 594
BseBI CCWGG 1 cut(s) 293
BseDI CCNNGG 3 cut(s) 240, 453, 550
BseGI GGATG 1 cut(s) 235
BseMII CTCAG 3 cut(s) 581, 600, 723
BseNI ACTGG 1 cut(s) 594
BseRI GAGGAG 2 cut(s) 158, 695
BseXI GCAGC 5 cut(s) 232, 282, 458, 501, 504
BsgI GTGCAG 1 cut(s) 707
Bsh1236I CGCG 2 cut(s) 92, 392
Bsh1285I CGRYCG 1 cut(s) 444
BshFI GGCC 6 cut(s) 5, 115, 306, 452, 555, 730
BshNI GGYRCC 1 cut(s) 185
BsiEI CGRYCG 1 cut(s) 444
BsiHKAI GWGCWC 1 cut(s) 419
BsiSI CCGG 6 cut(s) 242, 377, 444, 614, 636, 701
BsnI GGCC 6 cut(s) 5, 115, 306, 452, 555, 730
Bsp119I TTCGAA 1 cut(s) 51
Bsp1286I GDGCHC 1 cut(s) 419
Bsp143I GATC 1 cut(s) 539
Bsp1720I GCTNAGC 1 cut(s) 609
BspANI GGCC 6 cut(s) 5, 115, 306, 452, 555, 730
BspCNI CTCAG 3 cut(s) 580, 601, 724
BspFNI CGCG 2 cut(s) 92, 392
BspLI GGNNCC 6 cut(s) 187, 286, 305, 407, 541, 729
BspMAI CTGCAG 1 cut(s) 272
BspOI GCTAGC 1 cut(s) 318
BspPI GGATC 2 cut(s) 534, 547
BspT104I TTCGAA 1 cut(s) 51
BspT107I GGYRCC 1 cut(s) 185
BsrI ACTGG 1 cut(s) 594
BssECI CCNNGG 3 cut(s) 240, 453, 550
BssMI GATC 1 cut(s) 539
BssNI GRCGYC 1 cut(s) 333
BssSI CACGAG 2 cut(s) 177, 410
BssT1I CCWWGG 1 cut(s) 453
Bst2BI CACGAG 2 cut(s) 177, 410
Bst2UI CCWGG 1 cut(s) 293
Bst4CI ACNGT 4 cut(s) 323, 361, 485, 520
Bst6I CTCTTC 2 cut(s) 135, 647
BstACI GRCGYC 1 cut(s) 333
BstBI TTCGAA 1 cut(s) 51
BstC8I GCNNGC 6 cut(s) 12, 174, 316, 450, 575, 606
BstDEI CTNAG 3 cut(s) 567, 609, 732
BstDSI CCRYGG 1 cut(s) 550
BstF5I GGATG 1 cut(s) 235
BstFNI CGCG 2 cut(s) 92, 392
BstH2I RGCGCY 3 cut(s) 106, 472, 510
BstHHI GCGC 3 cut(s) 105, 471, 509
BstKTI GATC 1 cut(s) 542
BstMBI GATC 1 cut(s) 539
BstMCI CGRYCG 1 cut(s) 444
BstNI CCWGG 1 cut(s) 293
BstSCI CCNGG 5 cut(s) 240, 291, 375, 443, 635
BstSFI CTRYAG 2 cut(s) 213, 268
BstUI CGCG 2 cut(s) 92, 392
BstV1I GCAGC 5 cut(s) 232, 282, 458, 501, 504
BstV2I GAAGAC 2 cut(s) 60, 155
BstX2I RGATCY 1 cut(s) 539
BstXI CCANNNNNNTGG 1 cut(s) 299
BstYI RGATCY 1 cut(s) 539
BsuRI GGCC 6 cut(s) 5, 115, 306, 452, 555, 730
BtgI CCRYGG 1 cut(s) 550
BtrI CACGTC 1 cut(s) 716
BtsCI GGATG 1 cut(s) 235
Cac8I GCNNGC 6 cut(s) 12, 174, 316, 450, 575, 606
CfoI GCGC 3 cut(s) 105, 471, 509
Cfr13I GGNCC 5 cut(s) 304, 405, 592, 633, 728
CseI GACGC 1 cut(s) 341
Csp6I GTAC 3 cut(s) 148, 587, 657
CviAII CATG 2 cut(s) 73, 151
CviQI GTAC 3 cut(s) 148, 587, 657
DdeI CTNAG 3 cut(s) 567, 609, 732
DpnI GATC 1 cut(s) 541
DpnII GATC 1 cut(s) 539
EaeI YGGCCR 1 cut(s) 553
Eam1104I CTCTTC 2 cut(s) 135, 647
EarI CTCTTC 2 cut(s) 135, 647
EciI GGCGGA 2 cut(s) 331, 658
Eco130I CCWWGG 1 cut(s) 453
Eco147I AGGCCT 2 cut(s) 115, 452
Eco47I GGWCC 3 cut(s) 405, 592, 633
Eco47III AGCGCT 2 cut(s) 104, 470
EcoO109I RGGNCCY 2 cut(s) 405, 728
EcoRII CCWGG 1 cut(s) 291
EcoT14I CCWWGG 1 cut(s) 453
ErhI CCWWGG 1 cut(s) 453
FaeI CATG 2 cut(s) 76, 154
FaiI YATR 2 cut(s) 74, 152
FatI CATG 2 cut(s) 72, 150
FokI GGATG 1 cut(s) 222
FspBI CTAG 1 cut(s) 315
GlaI GCGC 3 cut(s) 104, 470, 508
GsuI CTGGAG 1 cut(s) 529
HaeII RGCGCY 3 cut(s) 106, 472, 510
HaeIII GGCC 6 cut(s) 5, 115, 306, 452, 555, 730
HapII CCGG 6 cut(s) 242, 377, 444, 614, 636, 701
HgaI GACGC 1 cut(s) 341
HhaI GCGC 3 cut(s) 105, 471, 509
Hin1I GRCGYC 1 cut(s) 333
Hin1II CATG 2 cut(s) 76, 154
Hin6I GCGC 3 cut(s) 103, 469, 507
HinP1I GCGC 3 cut(s) 103, 469, 507
HinfI GANTC 3 cut(s) 128, 565, 691
HpaII CCGG 6 cut(s) 242, 377, 444, 614, 636, 701
HphI GGTGA 1 cut(s) 376
Hpy166II GTNNAC 1 cut(s) 633
Hpy188I TCNGA 6 cut(s) 139, 331, 526, 570, 696, 720
Hpy188III TCNNGA 3 cut(s) 364, 439, 514
Hpy8I GTNNAC 1 cut(s) 633
Hpy99I CGWCG 2 cut(s) 485, 520
HpyAV CCTTC 1 cut(s) 521
HpyCH4III ACNGT 4 cut(s) 323, 361, 485, 520
HpyCH4IV ACGT 2 cut(s) 97, 715
HpyCH4V TGCA 3 cut(s) 10, 270, 688
HpyF3I CTNAG 3 cut(s) 567, 609, 732
HpySE526I ACGT 2 cut(s) 97, 715
Hsp92I GRCGYC 1 cut(s) 333
Hsp92II CATG 2 cut(s) 76, 154
HspAI GCGC 3 cut(s) 103, 469, 507
Kzo9I GATC 1 cut(s) 539
LmnI GCTCC 3 cut(s) 110, 290, 422
Lsp1109I GCAGC 5 cut(s) 232, 282, 458, 501, 504
LweI GCATC 2 cut(s) 244, 687
MaeI CTAG 1 cut(s) 315
MaeII ACGT 2 cut(s) 97, 715
MaeIII GTNAC 2 cut(s) 382, 511
MalI GATC 1 cut(s) 541
MboI GATC 1 cut(s) 539
MboII GAAGA 6 cut(s) 65, 152, 155, 661, 664, 718
MflI RGATCY 1 cut(s) 539
MhlI GDGCHC 1 cut(s) 419
MlyI GAGTC 3 cut(s) 122, 559, 700
MspI CCGG 6 cut(s) 242, 377, 444, 614, 636, 701
MspR9I CCNGG 5 cut(s) 242, 293, 377, 445, 637
MvaI CCWGG 1 cut(s) 293
MvnI CGCG 2 cut(s) 92, 392
NciI CCSGG 4 cut(s) 242, 377, 445, 637
NdeII GATC 1 cut(s) 539
NheI GCTAGC 1 cut(s) 314
NlaIII CATG 2 cut(s) 76, 154
NlaIV GGNNCC 6 cut(s) 187, 286, 305, 407, 541, 729
NmeAIII GCCGAG 2 cut(s) 21, 697
NmuCI GTSAC 2 cut(s) 382, 511
NspV TTCGAA 1 cut(s) 51
PceI AGGCCT 2 cut(s) 115, 452
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PleI GAGTC 3 cut(s) 122, 559, 699
PpsI GAGTC 3 cut(s) 122, 559, 699
PpuMI RGGWCCY 1 cut(s) 405
Psp5II RGGWCCY 1 cut(s) 405
Psp6I CCWGG 1 cut(s) 291
PspGI CCWGG 1 cut(s) 291
PspN4I GGNNCC 6 cut(s) 187, 286, 305, 407, 541, 729
PspPI GGNCC 5 cut(s) 304, 405, 592, 633, 728
PspPPI RGGWCCY 1 cut(s) 405
PstI CTGCAG 1 cut(s) 272
PsuI RGATCY 1 cut(s) 539
RsaI GTAC 3 cut(s) 149, 588, 658
RsaNI GTAC 3 cut(s) 148, 587, 657
Sau3AI GATC 1 cut(s) 539
Sau96I GGNCC 5 cut(s) 304, 405, 592, 633, 728
ScaI AGTACT 1 cut(s) 658
SchI GAGTC 3 cut(s) 122, 559, 700
ScrFI CCNGG 5 cut(s) 242, 293, 377, 445, 637
SduI GDGCHC 1 cut(s) 419
SetI ASST 7 cut(s) 87, 100, 260, 341, 597, 687, 718
SfaNI GCATC 2 cut(s) 244, 687
SfcI CTRYAG 2 cut(s) 213, 268
SfuI TTCGAA 1 cut(s) 51
SinI GGWCC 3 cut(s) 405, 592, 633
SmlI CTYRAG 1 cut(s) 660
SmoI CTYRAG 1 cut(s) 660
SseBI AGGCCT 2 cut(s) 115, 452
SspMI CTAG 1 cut(s) 315
StuI AGGCCT 2 cut(s) 115, 452
StyD4I CCNGG 5 cut(s) 240, 291, 375, 443, 635
StyI CCWWGG 1 cut(s) 453
TaaI ACNGT 4 cut(s) 323, 361, 485, 520
TaiI ACGT 2 cut(s) 100, 718
TaqI TCGA 3 cut(s) 51, 123, 642
TatI WGTACW 2 cut(s) 147, 656
TseFI GTSAC 2 cut(s) 382, 511
TseI GCWGC 5 cut(s) 245, 270, 471, 489, 492
Tsp45I GTSAC 2 cut(s) 382, 511
TspDTI ATGAA 1 cut(s) 89
VpaK11BI GGWCC 3 cut(s) 405, 592, 633
XcmI CCANNNNNNNNNTGG 1 cut(s) 482
XspI CTAG 1 cut(s) 315
ZrmI AGTACT 1 cut(s) 658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.