RchiOBHm_Chr7g0210371

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000053
Physical Location & Seq
Forward (+)
28044911 .. 28048550
3640 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18824

Sequence Viewer

Length: 1698 bp
ATGGATCCTCAGTTAGTTTCAGCATCTCAAGCTCAAACCAAAAATGCCAGTAGTACTCCTGATGTTGATCGACGTTCAGCTAATTTTTCTCCCAGCATTTGGGGCGATTATTTTCTGGCATATGCATCTATGGAAACTATGGATATTGAAGCCAACCAAAGTATCCAAGAACTGAAGGAAGAAGTGAAGAGGGTGCTAATGAGTTCTCCGCCTTCACAAAGATTAGAATTGATTGATTACATTCAGCGCTTGGGGGTATCCTACCATTTTGAGAATGAGATTTACCAACTTTTGCAGCAAAATTACAACCAGTACTCTTCTTATTATGACGATGATGATGACCTTCACACGGTTGCTCTACGTTTTCGGTTGCTCCGGCAACAAGGATTTAAGGTTTCATGCAACATGTTCAACAAGTTCATCGATGTTGATGGAAAATTTAAGGAATCATGCGTCGCTGACGTAGTAGGACTACAAAGTTTGTACGAAGCAACATATCTAAGGACACATGGAGAGGATATACTAGATCGAGCATTGTCCTTCACCACCACTCATCTTGAGTTTGCAATGGCACCACACGGCCGTGTAAGCCCCCCGCTTTTAAAACAAGTAGCTCATGCCTTATATCAACCACTCTGGAAGGGAAACCCAAGGATAGAAGCAAGGCATTACCTCTCTAGCTACCAGGAACTAAACACTTCGTATTTCAGTGATAGTCTTTTGACTTTTGCAAAGTTGGATTTCAATCAATTGCAGCGAATCCATCAAAAAGAACTAAGTAACATCACAAGGTGGTGGAAGGAGTTGGACTTTGTAAACAAACTACCTTTTGCTAGGGACAGGATAGTAGAGCTTTACTTTTGGTCTATGGGAGTTTACTTTGAGCCTAAGTATCATTTTGGGAGGACAGCATTATGCAAAGTTCTTGGCTTAATATCTGTGCTTGATGACACTTACGATGTGTATGGCACACCTGAAGAACTAAAGGTCTTTACTGAAGCTGTTGAGAGGTGGGATATCTCTGTCATGGATTCACTGCCTGACTATATGAAAGTTATCTATCAAGCATTGTTAAATGTCTACACTGACATTGAAGCCGAGCTTGCAAAGGAGGGAAACTCATATCGTATCAACTATGCAATAGAAGCAATGAAAATTCAAGTTAGATCTTATTTCGAGGAAGCCAAATGGTTCCACCAAAGTTACACACCGAAAACCCTTGATGAATATATGTCATTGGCACTTGCTACATCCACCATGTCTCTGATAGAAATCACATTTATTGTTACAATACCCGGTGATATTGTTACAAGAGACTCATTGGACTGGTTATCCAGTGACCCTAAATTTGTAAAGGCTTCAACAACAATTGGGAGACTCTTAGATGACATCCGAAGCCATGAGTTTGAGCAAAAGAGAGGACATGTTCCCTCAGCTGTGGAATGCTACATGAAAGAATACTGTGCTACAGAAAAAGAAGCGGTGATCGAACTAATTAAACAAGTGAATGATGCATGGAAGGATGTAAACGAAGGATTGCTCCACCCTATCGCTATTGTCCCTAGGCCACTGCTGTTGCTGATTCTTAATTTTTTACGCGTAGCTGATGTTGTATATAAGGAAGAAGATGCTTATACTGATGGAGTTGGGCTTAAGGATCATATAACTTCTCTGCTTGTCGAACCTATTTCAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

565

Amino Acids

65.34

Weight (kDa)

5.07

Isoelectric Point (pI)

48.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 33 - 208 2.2e-56 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 267 - 508 4.8e-93 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 307 - 508 2e-52 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 571
AccB7I CCANNNNNTGG 1 cut(s) 99
AccI GTMKAC 1 cut(s) 1080
AccII CGCG 1 cut(s) 1599
AciI CCGC 3 cut(s) 209, 596, 1481
AclWI GGATC 2 cut(s) 12, 1665
AcoI YGGCCR 1 cut(s) 580
AcsI RAATTY 3 cut(s) 437, 1155, 1346
AcuI CTGAAG 3 cut(s) 194, 996, 1017
AdeI CACNNNGTG 1 cut(s) 792
AfaI GTAC 3 cut(s) 55, 314, 485
AfeI AGCGCT 1 cut(s) 248
AfiI CCNNNNNNNGG 2 cut(s) 99, 349
AflII CTTAAG 1 cut(s) 1652
AflIII ACRYGT 3 cut(s) 405, 1423, 1597
AgsI TTSAA 7 cut(s) 149, 412, 745, 1094, 1160, 1362, 1692
AjnI CCWGG 1 cut(s) 684
AleI CACNNNNGTG 1 cut(s) 582
AluBI AGCT 9 cut(s) 32, 80, 614, 681, 853, 1001, 1102, 1436, 1604
AluI AGCT 9 cut(s) 32, 80, 614, 681, 853, 1001, 1102, 1436, 1604
Alw26I GTCTC 3 cut(s) 1266, 1308, 1369
AlwI GGATC 2 cut(s) 12, 1665
Aor51HI AGCGCT 1 cut(s) 248
AoxI GGCC 2 cut(s) 580, 1565
ApeKI GCWGC 2 cut(s) 295, 754
ApoI RAATTY 3 cut(s) 437, 1155, 1346
ArsI GACNNNNNNTTYG 2 cut(s) 1331, 1363
AspA2I CCTAGG 1 cut(s) 1562
AspLEI GCGC 1 cut(s) 249
AsuC2I CCSGG 1 cut(s) 1296
AsuHPI GGTGA 3 cut(s) 535, 1310, 1495
AvrII CCTAGG 1 cut(s) 1562
BaeI ACNNNNGTAYC 2 cut(s) 145, 178
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 571
BbvCI CCTCAGC 1 cut(s) 1432
BbvI GCAGC 2 cut(s) 307, 766
BccI CCATC 3 cut(s) 425, 771, 1634
BceAI ACGGC 2 cut(s) 567, 595
BciT130I CCWGG 1 cut(s) 686
BciVI GTATCC 2 cut(s) 173, 268
BcnI CCSGG 1 cut(s) 1296
BcoDI GTCTC 3 cut(s) 1266, 1308, 1369
BfaI CTAG 4 cut(s) 524, 678, 834, 1563
BfmI CTRYAG 1 cut(s) 1467
BfoI RGCGCY 1 cut(s) 250
BfrI CTTAAG 1 cut(s) 1652
BfuI GTATCC 2 cut(s) 173, 268
BglII AGATCT 1 cut(s) 1166
BisI GCNGC 2 cut(s) 296, 755
BlnI CCTAGG 1 cut(s) 1562
BlsI GCNGC 2 cut(s) 297, 756
BmcAI AGTACT 2 cut(s) 55, 314
Bme1390I CCNGG 2 cut(s) 686, 1296
BmiI GGNNCC 3 cut(s) 6, 573, 1193
BmrFI CCNGG 2 cut(s) 686, 1296
BmsI GCATC 4 cut(s) 32, 134, 1501, 1618
BplI GAGNNNNNCTC 2 cut(s) 1103, 1135
Bpu10I CCTNAGC 1 cut(s) 1432
BpuEI CTTGAG 2 cut(s) 12, 578
BpuMI CCSGG 1 cut(s) 1296
Bsa29I ATCGAT 1 cut(s) 423
BsaBI GATNNNNATC 3 cut(s) 66, 744, 1271
BsaJI CCNNGG 2 cut(s) 650, 1562
Bsc4I CCNNNNNNNGG 2 cut(s) 99, 349
Bse1I ACTGG 4 cut(s) 48, 310, 1331, 1335
Bse3DI GCAATG 2 cut(s) 573, 1155
Bse8I GATNNNNATC 3 cut(s) 66, 744, 1271
BseBI CCWGG 1 cut(s) 686
BseCI ATCGAT 1 cut(s) 423
BseDI CCNNGG 2 cut(s) 650, 1562
BseGI GGATG 3 cut(s) 1250, 1389, 1528
BseJI GATNNNNATC 3 cut(s) 66, 744, 1271
BseLI CCNNNNNNNGG 2 cut(s) 99, 349
BseMI GCAATG 2 cut(s) 573, 1155
BseMII CTCAG 2 cut(s) 23, 1446
BseNI ACTGG 4 cut(s) 48, 310, 1331, 1335
BseX3I CGGCCG 1 cut(s) 580
BseXI GCAGC 2 cut(s) 307, 766
BseYI CCCAGC 1 cut(s) 92
Bsh1236I CGCG 1 cut(s) 1599
Bsh1285I CGRYCG 1 cut(s) 583
BshFI GGCC 2 cut(s) 582, 1567
BshNI GGYRCC 1 cut(s) 571
BshVI ATCGAT 1 cut(s) 423
BsiEI CGRYCG 1 cut(s) 583
BsiSI CCGG 2 cut(s) 376, 1296
BslFI GGGAC 2 cut(s) 851, 1544
BslI CCNNNNNNNGG 2 cut(s) 99, 349
BsmAI GTCTC 3 cut(s) 1266, 1308, 1369
BsmFI GGGAC 2 cut(s) 851, 1544
BsmI GAATGC 1 cut(s) 1448
BsnI GGCC 2 cut(s) 582, 1567
Bsp143I GATC 6 cut(s) 4, 67, 526, 1166, 1485, 1657
BspACI CCGC 3 cut(s) 209, 596, 1481
BspANI GGCC 2 cut(s) 582, 1567
BspCNI CTCAG 2 cut(s) 22, 1445
BspDI ATCGAT 1 cut(s) 423
BspFNI CGCG 1 cut(s) 1599
BspLI GGNNCC 3 cut(s) 6, 573, 1193
BspPI GGATC 2 cut(s) 12, 1665
BspT107I GGYRCC 1 cut(s) 571
BspTI CTTAAG 1 cut(s) 1652
BsrDI GCAATG 2 cut(s) 573, 1155
BsrI ACTGG 4 cut(s) 48, 310, 1331, 1335
BssECI CCNNGG 2 cut(s) 650, 1562
BssMI GATC 6 cut(s) 4, 67, 526, 1166, 1485, 1657
BssT1I CCWWGG 2 cut(s) 650, 1562
Bst2UI CCWGG 1 cut(s) 686
Bst4CI ACNGT 2 cut(s) 352, 1463
Bst6I CTCTTC 2 cut(s) 182, 322
BstAFI CTTAAG 1 cut(s) 1652
BstC8I GCNNGC 1 cut(s) 1104
BstDEI CTNAG 6 cut(s) 9, 500, 776, 888, 1381, 1432
BstF5I GGATG 3 cut(s) 1250, 1389, 1528
BstFNI CGCG 1 cut(s) 1599
BstH2I RGCGCY 1 cut(s) 250
BstHHI GCGC 1 cut(s) 249
BstKTI GATC 6 cut(s) 7, 70, 529, 1169, 1488, 1660
BstMAI GTCTC 3 cut(s) 1266, 1308, 1369
BstMBI GATC 6 cut(s) 4, 67, 526, 1166, 1485, 1657
BstMCI CGRYCG 1 cut(s) 583
BstMWI GCNNNNNNNGC 5 cut(s) 29, 102, 588, 1103, 1145
BstNI CCWGG 1 cut(s) 686
BstNSI RCATGY 2 cut(s) 409, 1427
BstSCI CCNGG 2 cut(s) 684, 1294
BstSFI CTRYAG 1 cut(s) 1467
BstUI CGCG 1 cut(s) 1599
BstV1I GCAGC 2 cut(s) 307, 766
BstX2I RGATCY 2 cut(s) 4, 1166
BstYI RGATCY 2 cut(s) 4, 1166
BstZI CGGCCG 1 cut(s) 580
Bsu15I ATCGAT 1 cut(s) 423
BsuI GTATCC 2 cut(s) 173, 268
BsuRI GGCC 2 cut(s) 582, 1567
BsuTUI ATCGAT 1 cut(s) 423
BtsCI GGATG 3 cut(s) 1250, 1389, 1528
BtsI GCAGTG 2 cut(s) 1034, 1568
BtsIMutI CAGTG 5 cut(s) 715, 1034, 1083, 1342, 1568
Cac8I GCNNGC 1 cut(s) 1104
CfoI GCGC 1 cut(s) 249
ClaI ATCGAT 1 cut(s) 423
CseI GACGC 1 cut(s) 442
Csp6I GTAC 3 cut(s) 54, 313, 484
CspCI CAANNNNNGTGG 4 cut(s) 538, 573, 1557, 1592
CviQI GTAC 3 cut(s) 54, 313, 484
DdeI CTNAG 6 cut(s) 9, 500, 776, 888, 1381, 1432
DpnI GATC 6 cut(s) 6, 69, 528, 1168, 1487, 1659
DpnII GATC 6 cut(s) 4, 67, 526, 1166, 1485, 1657
DraI TTTAAA 1 cut(s) 603
DraIII CACNNNGTG 1 cut(s) 792
EaeI YGGCCR 1 cut(s) 580
EagI CGGCCG 1 cut(s) 580
Eam1104I CTCTTC 2 cut(s) 182, 322
EarI CTCTTC 2 cut(s) 182, 322
EciI GGCGGA 1 cut(s) 198
EclXI CGGCCG 1 cut(s) 580
Eco130I CCWWGG 2 cut(s) 650, 1562
Eco32I GATATC 1 cut(s) 1018
Eco47III AGCGCT 1 cut(s) 248
Eco52I CGGCCG 1 cut(s) 580
Eco57I CTGAAG 3 cut(s) 194, 996, 1017
EcoRII CCWGG 1 cut(s) 684
EcoRV GATATC 1 cut(s) 1018
EcoT14I CCWWGG 2 cut(s) 650, 1562
EcoT22I ATGCAT 2 cut(s) 127, 1516
ErhI CCWWGG 2 cut(s) 650, 1562
FalI AAGNNNNNCTT 2 cut(s) 1086, 1118
FaqI GGGAC 2 cut(s) 851, 1544
FauI CCCGC 1 cut(s) 603
FauNDI CATATG 1 cut(s) 121
FblI GTMKAC 1 cut(s) 1080
Fnu4HI GCNGC 2 cut(s) 296, 755
FokI GGATG 3 cut(s) 1237, 1376, 1535
Fsp4HI GCNGC 2 cut(s) 296, 755
FspBI CTAG 4 cut(s) 524, 678, 834, 1563
GlaI GCGC 1 cut(s) 248
GluI GCNGC 2 cut(s) 296, 755
GsaI CCCAGC 1 cut(s) 96
HaeII RGCGCY 1 cut(s) 250
HaeIII GGCC 2 cut(s) 582, 1567
HapII CCGG 2 cut(s) 376, 1296
HgaI GACGC 1 cut(s) 442
HhaI GCGC 1 cut(s) 249
Hin6I GCGC 1 cut(s) 247
HinP1I GCGC 1 cut(s) 247
HinfI GANTC 6 cut(s) 446, 759, 1031, 1316, 1377, 1582
HpaII CCGG 2 cut(s) 376, 1296
HphI GGTGA 3 cut(s) 535, 1310, 1495
Hpy166II GTNNAC 4 cut(s) 817, 877, 1081, 1528
Hpy188I TCNGA 2 cut(s) 1266, 1394
Hpy188III TCNNGA 3 cut(s) 59, 557, 637
Hpy8I GTNNAC 4 cut(s) 817, 877, 1081, 1528
Hpy99I CGWCG 2 cut(s) 75, 458
HpyAV CCTTC 8 cut(s) 169, 222, 353, 550, 634, 793, 1513, 1526
HpyCH4III ACNGT 2 cut(s) 352, 1463
HpyCH4IV ACGT 3 cut(s) 73, 361, 462
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 102, 588, 1103, 1145
HpyF3I CTNAG 6 cut(s) 9, 500, 776, 888, 1381, 1432
HpySE526I ACGT 3 cut(s) 73, 361, 462
HspAI GCGC 1 cut(s) 247
Kzo9I GATC 6 cut(s) 4, 67, 526, 1166, 1485, 1657
LmnI GCTCC 2 cut(s) 378, 1545
Lsp1109I GCAGC 2 cut(s) 307, 766
LweI GCATC 4 cut(s) 32, 134, 1501, 1618
MaeI CTAG 4 cut(s) 524, 678, 834, 1563
MaeII ACGT 3 cut(s) 73, 361, 462
MaeIII GTNAC 5 cut(s) 779, 1202, 1285, 1306, 1337
MalI GATC 6 cut(s) 6, 69, 528, 1168, 1487, 1659
MboI GATC 6 cut(s) 4, 67, 526, 1166, 1485, 1657
MboII GAAGA 6 cut(s) 191, 199, 309, 989, 1634, 1637
MfeI CAATTG 2 cut(s) 749, 1368
MflI RGATCY 2 cut(s) 4, 1166
MluI ACGCGT 1 cut(s) 1597
MlyI GAGTC 2 cut(s) 1310, 1371
MmeI TCCRAC 2 cut(s) 717, 786
Mph1103I ATGCAT 2 cut(s) 127, 1516
MseI TTAA 8 cut(s) 390, 441, 602, 932, 1073, 1497, 1587, 1653
MslI CAYNNNNRTG 1 cut(s) 582
MspA1I CMGCKG 1 cut(s) 1436
MspCI CTTAAG 1 cut(s) 1652
MspI CCGG 2 cut(s) 376, 1296
MspR9I CCNGG 2 cut(s) 686, 1296
MunI CAATTG 2 cut(s) 749, 1368
Mva1269I GAATGC 1 cut(s) 1448
MvaI CCWGG 1 cut(s) 686
MvnI CGCG 1 cut(s) 1599
MwoI GCNNNNNNNGC 5 cut(s) 29, 102, 588, 1103, 1145
NciI CCSGG 1 cut(s) 1296
NdeI CATATG 1 cut(s) 121
NdeII GATC 6 cut(s) 4, 67, 526, 1166, 1485, 1657
NlaIV GGNNCC 3 cut(s) 6, 573, 1193
NmeAIII GCCGAG 1 cut(s) 1123
NmuCI GTSAC 1 cut(s) 1337
NsiI ATGCAT 2 cut(s) 127, 1516
NspI RCATGY 2 cut(s) 409, 1427
OliI CACNNNNGTG 1 cut(s) 582
PciI ACATGT 2 cut(s) 405, 1423
PctI GAATGC 1 cut(s) 1448
PfeI GAWTC 4 cut(s) 446, 759, 1031, 1582
PflMI CCANNNNNTGG 1 cut(s) 99
PkrI GCNGC 2 cut(s) 297, 756
PleI GAGTC 2 cut(s) 1310, 1371
PpsI GAGTC 2 cut(s) 1310, 1371
PscI ACATGT 2 cut(s) 405, 1423
Psp6I CCWGG 1 cut(s) 684
PspFI CCCAGC 1 cut(s) 92
PspGI CCWGG 1 cut(s) 684
PspN4I GGNNCC 3 cut(s) 6, 573, 1193
PsuI RGATCY 2 cut(s) 4, 1166
PvuII CAGCTG 1 cut(s) 1436
RsaI GTAC 3 cut(s) 55, 314, 485
RsaNI GTAC 3 cut(s) 54, 313, 484
RseI CAYNNNNRTG 1 cut(s) 582
SaqAI TTAA 8 cut(s) 390, 441, 602, 932, 1073, 1497, 1587, 1653
SatI GCNGC 2 cut(s) 296, 755
Sau3AI GATC 6 cut(s) 4, 67, 526, 1166, 1485, 1657
ScaI AGTACT 2 cut(s) 55, 314
SchI GAGTC 2 cut(s) 1310, 1371
ScrFI CCNGG 2 cut(s) 686, 1296
SfaNI GCATC 4 cut(s) 32, 134, 1501, 1618
SfcI CTRYAG 1 cut(s) 1467
SmiMI CAYNNNNRTG 1 cut(s) 582
SmlI CTYRAG 3 cut(s) 27, 557, 1652
SmoI CTYRAG 3 cut(s) 27, 557, 1652
SsiI CCGC 3 cut(s) 209, 596, 1481
SspMI CTAG 4 cut(s) 524, 678, 834, 1563
StyD4I CCNGG 2 cut(s) 684, 1294
StyI CCWWGG 2 cut(s) 650, 1562
TaaI ACNGT 2 cut(s) 352, 1463
TaiI ACGT 3 cut(s) 76, 364, 465
TaqI TCGA 6 cut(s) 70, 423, 529, 1176, 1488, 1680
TatI WGTACW 2 cut(s) 53, 312
TfiI GAWTC 4 cut(s) 446, 759, 1031, 1582
Tru1I TTAA 8 cut(s) 390, 441, 602, 932, 1073, 1497, 1587, 1653
Tru9I TTAA 8 cut(s) 390, 441, 602, 932, 1073, 1497, 1587, 1653
TscAI CASTG 5 cut(s) 715, 1041, 1090, 1342, 1575
TseFI GTSAC 1 cut(s) 1337
TseI GCWGC 2 cut(s) 295, 754
Tsp45I GTSAC 1 cut(s) 1337
TspDTI ATGAA 6 cut(s) 387, 409, 1064, 1166, 1239, 1466
TspRI CASTG 5 cut(s) 715, 1041, 1090, 1342, 1575
Van91I CCANNNNNTGG 1 cut(s) 99
Vha464I CTTAAG 1 cut(s) 1652
XapI RAATTY 3 cut(s) 437, 1155, 1346
XceI RCATGY 2 cut(s) 409, 1427
XmaJI CCTAGG 1 cut(s) 1562
XmiI GTMKAC 1 cut(s) 1080
XspI CTAG 4 cut(s) 524, 678, 834, 1563
ZrmI AGTACT 2 cut(s) 55, 314
Zsp2I ATGCAT 2 cut(s) 127, 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.