Prupe.4G198000_v2.0.a1

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Forward (+)
12134771 .. 12137039
2269 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G198000.1

Sequence Viewer

Length: 1455 bp
ATGTCTTTCCCAGTAGCAGCTCAAGTAGCACAGAGTGCTGAGCCAGAAATTGTTCGGCAGACAGCAAATTATCACCCAAGCATTTGGGGAGATCGGTTCCTCAATTATGACGAAAAAAGCATTCAGATAACTTATGACCATATGCAACAGCAAGTGGACCAACTGAAAGTAACAGTGAGGAAGGAAGTATTCACAACAAGTGCAGGTGATTTTTCACATCAGCTCAAGCTAATTGATGCAGTCCAGCGCCTTGGCGTGGCTTACCATTTCGAAAGAGAAATCGAAGAAGCCTTGCAACGTGTGCACGTTACATATCATGACTATGATGGTGGTGATCTCTACGCTGTTGCTCTTGGTTTTCGGCTACTAAGACAACATGGATTCAATGTTTCTTGCGATATATTCAACAAGTTCAAAGATAAAAATGGTAACTTCAAGGAGAGCTTAACTGCTGATGTTCCTGGGATGCTAAGCTTTTATGAAGCAGCACATCTAAGGAAGCATGGAGAAGACATACTAGAAGAGGCTCTTGTTTTCACCACCACTCACCTTGAGTCGGCAGAAACAACGGAAGCAAGAAATCCACTGGCTTTACAGATAACTCAAGCCTTAGAGAGACCTCTGCGGAAGGGTCTGGAGAGGGTATGTGCCAGGGGTTACATGTCAATCTACCAGGATGATGCTTCACATAGTGAAGCTATATTGAAACTTGCAAAGTTGGATTTCAATATCGTTCAATCTTTACACAAGAAGGAGCTCAGTGAGATTGCTAGGTGGGATATCAATTGTATGGATGAACTTCCAGACTATATGCAAGTATTTTACCGTACCCTCTTGAATGTTTACGACGAAATTGAGGAGGAGATGGTAAAAGAAGGAAGATCATACCGAGTTTACTATGCAAAAGAAGCTGTTAAAGCTCAAGCCCGGAACTACTTTGCTGAGGCCCAATGGTTGCACAAAGACTACATTCCAAGCATGGAAGAGTATATGAGTGTAGCAACAGCTTGTGTTGGTAACACCTTGCTTTCAATTACATCTCTGGTTGGCATGGGAGATATTGTAACGAAGGAAGCTTTTGAGTGGTTGTTGAATGATCCTAGAATTCTTAGAGCTTCAAATATCATTTTTAGGCTCATGGATGACCTTAGTGGATACGAGTTTGAGAAAGAGAGAGAGCATGTTGCTTCTAGTATTGAATGCTACATGAAGCAATATGGGGTGCCAGAGCAAGAGGTGCTTGATATTTTTAACAAACAGGTTAAAGATTTGTGGAAGGATATCAACGAGGAGTTTCTTAGACCAACTGATGTGCCAATGCCTGTCCTCATGCGTGTTCTGAATCTAACAAGAGTGGTTGATCTCCTTTACAAAGGGGAGGATGGCTACACACATGTTGGGAAAGTGATGAAAGATAGTGTTGCTTCACTTTTTATTGAACCCGTGCCTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

485

Amino Acids

55.87

Weight (kDa)

5.14

Isoelectric Point (pI)

50.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 194
Acc36I ACCTGC 1 cut(s) 194
AccB1I GGYRCC 1 cut(s) 1222
AciI CCGC 1 cut(s) 625
AclWI GGATC 1 cut(s) 1091
AcsI RAATTY 1 cut(s) 1104
AdeI CACNNNGTG 2 cut(s) 35, 692
AfaI GTAC 1 cut(s) 829
AfiI CCNNNNNNNGG 2 cut(s) 256, 556
AflIII ACRYGT 3 cut(s) 298, 660, 1393
AjnI CCWGG 3 cut(s) 460, 650, 672
Alw21I GWGCWC 2 cut(s) 306, 759
Alw26I GTCTC 1 cut(s) 610
Alw44I GTGCAC 1 cut(s) 302
AlwI GGATC 1 cut(s) 1091
AoxI GGCC 1 cut(s) 945
ApaLI GTGCAC 1 cut(s) 302
ApeKI GCWGC 2 cut(s) 17, 485
ApoI RAATTY 1 cut(s) 1104
Asp700I GAANNNNTTC 1 cut(s) 51
AspLEI GCGC 1 cut(s) 249
AspS9I GGNCC 2 cut(s) 157, 946
AsuC2I CCSGG 1 cut(s) 928
AsuHPI GGTGA 5 cut(s) 65, 218, 344, 529, 539
AsuII TTCGAA 1 cut(s) 270
AvaII GGWCC 1 cut(s) 157
BaeGI GKGCMC 1 cut(s) 306
BanI GGYRCC 1 cut(s) 1222
BanII GRGCYC 1 cut(s) 759
BbsI GAAGAC 1 cut(s) 516
Bbv12I GWGCWC 2 cut(s) 306, 759
BbvCI CCTCAGC 1 cut(s) 942
BbvI GCAGC 2 cut(s) 29, 497
BccI CCATC 3 cut(s) 320, 859, 1376
BciT130I CCWGG 3 cut(s) 462, 652, 674
BciVI GTATCC 1 cut(s) 1148
BcnI CCSGG 1 cut(s) 928
BcoDI GTCTC 1 cut(s) 610
BfaI CTAG 4 cut(s) 518, 771, 1101, 1191
BfoI RGCGCY 1 cut(s) 250
BfuAI ACCTGC 1 cut(s) 194
BfuI GTATCC 1 cut(s) 1148
BisI GCNGC 2 cut(s) 18, 486
BlpI GCTNAGC 2 cut(s) 39, 470
BlsI GCNGC 2 cut(s) 19, 487
Bme1390I CCNGG 4 cut(s) 462, 652, 674, 928
Bme18I GGWCC 1 cut(s) 157
BmgT120I GGNCC 2 cut(s) 157, 946
BmiI GGNNCC 2 cut(s) 98, 1224
BmrFI CCNGG 4 cut(s) 462, 652, 674, 928
BmrI ACTGGG 1 cut(s) 5
BmsI GCATC 3 cut(s) 226, 456, 670
BmuI ACTGGG 1 cut(s) 5
BpiI GAAGAC 1 cut(s) 516
BpmI CTGGAG 1 cut(s) 656
Bpu10I CCTNAGC 1 cut(s) 942
Bpu1102I GCTNAGC 2 cut(s) 39, 470
Bpu14I TTCGAA 1 cut(s) 270
BpuEI CTTGAG 5 cut(s) 6, 209, 572, 588, 906
BpuMI CCSGG 1 cut(s) 928
BsaI GGTCTC 1 cut(s) 610
BsaJI CCNNGG 3 cut(s) 250, 461, 651
BsaXI ACNNNNNCTCC 2 cut(s) 1047, 1077
Bsc4I CCNNNNNNNGG 2 cut(s) 256, 556
Bse1I ACTGG 2 cut(s) 11, 591
BseBI CCWGG 3 cut(s) 462, 652, 674
BseDI CCNNGG 3 cut(s) 250, 461, 651
BseGI GGATG 5 cut(s) 471, 682, 799, 1147, 1387
BseLI CCNNNNNNNGG 2 cut(s) 256, 556
BseMII CTCAG 3 cut(s) 30, 772, 933
BseNI ACTGG 2 cut(s) 11, 591
BseRI GAGGAG 3 cut(s) 872, 875, 1304
BseSI GKGCMC 1 cut(s) 306
BseXI GCAGC 2 cut(s) 29, 497
BsgI GTGCAG 1 cut(s) 222
BshFI GGCC 1 cut(s) 947
BshNI GGYRCC 1 cut(s) 1222
BsiHKAI GWGCWC 2 cut(s) 306, 759
BsiSI CCGG 1 cut(s) 928
BslI CCNNNNNNNGG 2 cut(s) 256, 556
BsmAI GTCTC 1 cut(s) 610
BsmI GAATGC 2 cut(s) 120, 1205
BsnI GGCC 1 cut(s) 947
Bso31I GGTCTC 1 cut(s) 610
Bsp119I TTCGAA 1 cut(s) 270
Bsp1286I GDGCHC 2 cut(s) 306, 759
Bsp143I GATC 5 cut(s) 91, 334, 881, 1096, 1360
Bsp1720I GCTNAGC 2 cut(s) 39, 470
BspACI CCGC 1 cut(s) 625
BspANI GGCC 1 cut(s) 947
BspCNI CTCAG 3 cut(s) 31, 771, 934
BspHI TCATGA 1 cut(s) 316
BspLI GGNNCC 2 cut(s) 98, 1224
BspMI ACCTGC 1 cut(s) 194
BspPI GGATC 1 cut(s) 1091
BspT104I TTCGAA 1 cut(s) 270
BspT107I GGYRCC 1 cut(s) 1222
BspTNI GGTCTC 1 cut(s) 610
BsrI ACTGG 2 cut(s) 11, 591
BssECI CCNNGG 3 cut(s) 250, 461, 651
BssMI GATC 5 cut(s) 91, 334, 881, 1096, 1360
BssT1I CCWWGG 1 cut(s) 250
Bst2UI CCWGG 3 cut(s) 462, 652, 674
Bst4CI ACNGT 2 cut(s) 175, 827
Bst6I CTCTTC 2 cut(s) 516, 978
BstAPI GCANNNNNTGC 3 cut(s) 35, 301, 1237
BstBI TTCGAA 1 cut(s) 270
BstF5I GGATG 5 cut(s) 471, 682, 799, 1147, 1387
BstH2I RGCGCY 1 cut(s) 250
BstHHI GCGC 1 cut(s) 249
BstKTI GATC 5 cut(s) 94, 337, 884, 1099, 1363
BstMAI GTCTC 1 cut(s) 610
BstMBI GATC 5 cut(s) 91, 334, 881, 1096, 1360
BstMWI GCNNNNNNNGC 6 cut(s) 26, 35, 301, 908, 917, 1237
BstNI CCWGG 3 cut(s) 462, 652, 674
BstNSI RCATGY 3 cut(s) 664, 1184, 1397
BstSCI CCNGG 4 cut(s) 460, 650, 672, 926
BstSLI GKGCMC 1 cut(s) 306
BstV1I GCAGC 2 cut(s) 29, 497
BstV2I GAAGAC 1 cut(s) 516
BstXI CCANNNNNNTGG 2 cut(s) 84, 251
BsuI GTATCC 1 cut(s) 1148
BsuRI GGCC 1 cut(s) 947
BtsCI GGATG 5 cut(s) 471, 682, 799, 1147, 1387
BtsIMutI CAGTG 3 cut(s) 180, 584, 766
BveI ACCTGC 1 cut(s) 194
CciI TCATGA 1 cut(s) 316
CfoI GCGC 1 cut(s) 249
Cfr13I GGNCC 2 cut(s) 157, 946
Csp6I GTAC 1 cut(s) 828
CspCI CAANNNNNGTGG 2 cut(s) 532, 567
CviQI GTAC 1 cut(s) 828
DpnI GATC 5 cut(s) 93, 336, 883, 1098, 1362
DpnII GATC 5 cut(s) 91, 334, 881, 1096, 1360
DraIII CACNNNGTG 2 cut(s) 35, 692
Eam1104I CTCTTC 2 cut(s) 516, 978
EarI CTCTTC 2 cut(s) 516, 978
Ecl136II GAGCTC 1 cut(s) 757
Eco130I CCWWGG 1 cut(s) 250
Eco24I GRGCYC 1 cut(s) 759
Eco31I GGTCTC 1 cut(s) 610
Eco32I GATATC 2 cut(s) 781, 1282
Eco47I GGWCC 1 cut(s) 157
Eco53kI GAGCTC 1 cut(s) 757
EcoICRI GAGCTC 1 cut(s) 757
EcoRI GAATTC 1 cut(s) 1104
EcoRII CCWGG 3 cut(s) 460, 650, 672
EcoRV GATATC 2 cut(s) 781, 1282
EcoT14I CCWWGG 1 cut(s) 250
EcoT38I GRGCYC 1 cut(s) 759
ErhI CCWWGG 1 cut(s) 250
FalI AAGNNNNNCTT 6 cut(s) 428, 460, 513, 545, 1224, 1256
FauNDI CATATG 1 cut(s) 141
Fnu4HI GCNGC 2 cut(s) 18, 486
FokI GGATG 5 cut(s) 478, 689, 806, 1154, 1394
FriOI GRGCYC 1 cut(s) 759
Fsp4HI GCNGC 2 cut(s) 18, 486
FspBI CTAG 4 cut(s) 518, 771, 1101, 1191
GlaI GCGC 1 cut(s) 248
GluI GCNGC 2 cut(s) 18, 486
GsuI CTGGAG 1 cut(s) 656
HaeII RGCGCY 1 cut(s) 250
HaeIII GGCC 1 cut(s) 947
HapII CCGG 1 cut(s) 928
HhaI GCGC 1 cut(s) 249
Hin6I GCGC 1 cut(s) 247
HinP1I GCGC 1 cut(s) 247
HindIII AAGCTT 2 cut(s) 472, 1074
HinfI GANTC 3 cut(s) 381, 554, 1342
HpaII CCGG 1 cut(s) 928
HphI GGTGA 5 cut(s) 65, 218, 344, 529, 539
Hpy166II GTNNAC 4 cut(s) 157, 304, 844, 895
Hpy188I TCNGA 3 cut(s) 126, 1341, 1454
Hpy188III TCNNGA 4 cut(s) 317, 635, 803, 835
Hpy8I GTNNAC 4 cut(s) 157, 304, 844, 895
Hpy99I CGWCG 1 cut(s) 851
HpyAV CCTTC 6 cut(s) 175, 622, 745, 869, 1063, 1270
HpyCH4III ACNGT 2 cut(s) 175, 827
HpyCH4IV ACGT 2 cut(s) 298, 306
HpyCH4V TGCA 9 cut(s) 145, 203, 239, 295, 304, 713, 814, 902, 958
HpyF10VI GCNNNNNNNGC 6 cut(s) 26, 35, 301, 908, 917, 1237
HpySE526I ACGT 2 cut(s) 298, 306
HspAI GCGC 1 cut(s) 247
Kzo9I GATC 5 cut(s) 91, 334, 881, 1096, 1360
LmnI GCTCC 1 cut(s) 754
Lsp1109I GCAGC 2 cut(s) 29, 497
LweI GCATC 3 cut(s) 226, 456, 670
MaeI CTAG 4 cut(s) 518, 771, 1101, 1191
MaeII ACGT 2 cut(s) 298, 306
MaeIII GTNAC 6 cut(s) 169, 307, 428, 656, 1016, 1063
MalI GATC 5 cut(s) 93, 336, 883, 1098, 1362
MboI GATC 5 cut(s) 91, 334, 881, 1096, 1360
MboII GAAGA 5 cut(s) 296, 521, 533, 891, 995
MfeI CAATTG 1 cut(s) 784
MhlI GDGCHC 2 cut(s) 306, 759
MluCI AATT 8 cut(s) 48, 67, 103, 231, 784, 852, 1032, 1104
MlyI GAGTC 1 cut(s) 563
MmeI TCCRAC 1 cut(s) 699
MroXI GAANNNNTTC 1 cut(s) 51
MseI TTAA 4 cut(s) 446, 915, 1251, 1263
MslI CAYNNNNRTG 1 cut(s) 321
MspI CCGG 1 cut(s) 928
MspR9I CCNGG 4 cut(s) 462, 652, 674, 928
MunI CAATTG 1 cut(s) 784
Mva1269I GAATGC 2 cut(s) 120, 1205
MvaI CCWGG 3 cut(s) 462, 652, 674
MwoI GCNNNNNNNGC 6 cut(s) 26, 35, 301, 908, 917, 1237
NciI CCSGG 1 cut(s) 928
NdeI CATATG 1 cut(s) 141
NdeII GATC 5 cut(s) 91, 334, 881, 1096, 1360
NlaIV GGNNCC 2 cut(s) 98, 1224
NspI RCATGY 3 cut(s) 664, 1184, 1397
NspV TTCGAA 1 cut(s) 270
PagI TCATGA 1 cut(s) 316
PaqCI CACCTGC 1 cut(s) 194
PciI ACATGT 2 cut(s) 660, 1393
PctI GAATGC 2 cut(s) 120, 1205
PdmI GAANNNNTTC 1 cut(s) 51
PfeI GAWTC 2 cut(s) 381, 1342
PkrI GCNGC 2 cut(s) 19, 487
PleI GAGTC 1 cut(s) 562
PpsI GAGTC 1 cut(s) 562
PscI ACATGT 2 cut(s) 660, 1393
Psp124BI GAGCTC 1 cut(s) 759
Psp6I CCWGG 3 cut(s) 460, 650, 672
PspGI CCWGG 3 cut(s) 460, 650, 672
PspN4I GGNNCC 2 cut(s) 98, 1224
PspPI GGNCC 2 cut(s) 157, 946
RsaI GTAC 1 cut(s) 829
RsaNI GTAC 1 cut(s) 828
RseI CAYNNNNRTG 1 cut(s) 321
SacI GAGCTC 1 cut(s) 759
SaqAI TTAA 4 cut(s) 446, 915, 1251, 1263
SatI GCNGC 2 cut(s) 18, 486
Sau3AI GATC 5 cut(s) 91, 334, 881, 1096, 1360
Sau96I GGNCC 2 cut(s) 157, 946
SchI GAGTC 1 cut(s) 563
ScrFI CCNGG 4 cut(s) 462, 652, 674, 928
SduI GDGCHC 2 cut(s) 306, 759
SfaNI GCATC 3 cut(s) 226, 456, 670
SfuI TTCGAA 1 cut(s) 270
SinI GGWCC 1 cut(s) 157
SmiMI CAYNNNNRTG 1 cut(s) 321
SmlI CTYRAG 5 cut(s) 21, 224, 551, 603, 921
SmoI CTYRAG 5 cut(s) 21, 224, 551, 603, 921
Sse9I AATT 8 cut(s) 48, 67, 103, 231, 784, 852, 1032, 1104
SsiI CCGC 1 cut(s) 625
SspMI CTAG 4 cut(s) 518, 771, 1101, 1191
SstI GAGCTC 1 cut(s) 759
StyD4I CCNGG 4 cut(s) 460, 650, 672, 926
StyI CCWWGG 1 cut(s) 250
TaaI ACNGT 2 cut(s) 175, 827
TaiI ACGT 2 cut(s) 301, 309
TaqI TCGA 2 cut(s) 270, 282
TasI AATT 8 cut(s) 48, 67, 103, 231, 784, 852, 1032, 1104
TfiI GAWTC 2 cut(s) 381, 1342
Tru1I TTAA 4 cut(s) 446, 915, 1251, 1263
Tru9I TTAA 4 cut(s) 446, 915, 1251, 1263
TscAI CASTG 3 cut(s) 180, 591, 766
TseI GCWGC 2 cut(s) 17, 485
TspDTI ATGAA 4 cut(s) 495, 810, 1223, 1424
TspGWI ACGGA 1 cut(s) 584
TspRI CASTG 3 cut(s) 180, 591, 766
VneI GTGCAC 1 cut(s) 302
VpaK11BI GGWCC 1 cut(s) 157
XapI RAATTY 1 cut(s) 1104
XceI RCATGY 3 cut(s) 664, 1184, 1397
XmnI GAANNNNTTC 1 cut(s) 51
XspI CTAG 4 cut(s) 518, 771, 1101, 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.