Rh3DG212800

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000053
Physical Location & Seq
Forward (+)
19659807 .. 19662147
2341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG212800.1

Sequence Viewer

Length: 1218 bp
ATGTTAAGCTTTTATGAAGCAACACATCTAAGGATGCATGGTGAAGATACACTAGAAGATGCTGTGTTTTTCACCACAACTCACCTTGAGACATCTGCAACTCATGTAAGTCATCCACTTGCAGCGGAAATAACGCAAGCCTTAGAGAGACCTCTACGAAAAAGTCCAGAAAGATTATGTGCAAGGCGTTACATGTCAATCTTACAAGATAATCCTAAATCTTTGCATCATGAAGTAGTAGCTTTGTTGAAACTTGCGGGGTTAGATTTCAATCTTGTTCAGTCTTTACACAAAAGGGAGCTCAATGAGATCTCTAGGTGGTGGAAAGAACTAGACTTTGAAAGGGAGCTTCCTTTCGCAAGAAATAGGATTGTGGAGTTGTACTTTTGGACAGTGGGAGTATTTTTTGAACCCCAATACGCCTCAGGGAGAAAATTTCTAACAAAAGTAATTGCCTTGGGGTCAGTTTTGGATGATATTTACGATGCATATGGTACATTTGAAGAACTCGAGATCTTTACTGAAGCAATTCAAAGGTGGGACATCAATTGTATAGATGAATTGCCATACTATATGAAGATATTTTATCGCAGGCTGCTGAATGTTTGCAGTGAAATTGAGGGGGAGATGGTAAAGCAAGGAACTTCATACCGAGTACATTATGCAAAAGAAGCTTTAAAAGCTCAAGCCCGATTATACTTTGCCGAGGCACGATGGCTCCATGAAGACTACATCCCAAGCATGGATGAGTATATGGGTATCGCGATACCTTCTGTTGGAAACACTTTGCTTTCGACTATATCTTTAGTCGGAATGGGAGACATAGTGACCAAGGAGGCATTTAAGTGGTTAGTAAATGACCCTAAAATTCTTAGAGCTTCCAACATCATTTTCAGGCTCATGGATGACATTGTTTCTAGCAAGTTTGAGAAAGAGAGAGAGCATGTTGCTTCTAGTATTGATTGCTACATGAAGCAACATGGGGTCTCAGAACAAGAGACCATTGAAGTCTTCAACAAAAAAATTGTGGATTCGTGGAAGGATATAAATGAAGAGTTTCTTAAACCGACCGCTGTGCCGATGCCTGTGCTTACTCGTGTTCTTAACCTAACGAGAGTGGTTGATCTCCTTTACAAAGGGGAGGATGAGTACACTGGAGTGGGAAACGTTATGAAAGATGGTGTTGTCTCACTCTTCATCGATCCAGTGCCACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

405

Amino Acids

46.91

Weight (kDa)

5.35

Isoelectric Point (pI)

47.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 1 - 48 6.9e-10 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 109 - 348 1.6e-98 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 149 - 348 1e-57 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 764
AciI CCGC 3 cut(s) 125, 257, 1071
AclI AACGTT 1 cut(s) 1167
AclWI GGATC 1 cut(s) 1196
AcsI RAATTY 2 cut(s) 434, 867
AcuI CTGAAG 1 cut(s) 543
AfaI GTAC 4 cut(s) 383, 496, 657, 1151
AfiI CCNNNNNNNGG 2 cut(s) 742, 776
AflIII ACRYGT 1 cut(s) 192
AgsI TTSAA 8 cut(s) 250, 271, 341, 410, 503, 533, 1007, 1015
AjuI GAANNNNNNNTTGG 2 cut(s) 875, 907
AleI CACNNNNGTG 1 cut(s) 1157
AluBI AGCT 7 cut(s) 9, 242, 301, 349, 674, 683, 878
AluI AGCT 7 cut(s) 9, 242, 301, 349, 674, 683, 878
Alw21I GWGCWC 1 cut(s) 303
Alw26I GTCTC 6 cut(s) 83, 142, 813, 991, 992, 1192
AlwI GGATC 1 cut(s) 1196
Ama87I CYCGRG 1 cut(s) 509
ApeKI GCWGC 2 cut(s) 122, 595
ApoI RAATTY 2 cut(s) 434, 867
Asp700I GAANNNNTTC 2 cut(s) 528, 1056
AsuHPI GGTGA 3 cut(s) 53, 64, 74
AvaI CYCGRG 1 cut(s) 509
AxyI CCTNAGG 1 cut(s) 424
BanII GRGCYC 1 cut(s) 303
BauI CACGAG 1 cut(s) 1095
BbsI GAAGAC 2 cut(s) 732, 1003
Bbv12I GWGCWC 1 cut(s) 303
BbvI GCAGC 2 cut(s) 134, 582
BccI CCATC 3 cut(s) 622, 708, 1172
BcgI CGANNNNNNTGC 4 cut(s) 1057, 1069, 1091, 1103
BcoDI GTCTC 6 cut(s) 83, 142, 813, 991, 992, 1192
BfaI CTAG 5 cut(s) 53, 315, 332, 918, 954
BglII AGATCT 2 cut(s) 309, 513
BisI GCNGC 2 cut(s) 123, 596
BlsI GCNGC 2 cut(s) 124, 597
BmeT110I CYCGRG 1 cut(s) 509
BmiI GGNNCC 1 cut(s) 719
BmsI GCATC 5 cut(s) 24, 49, 235, 475, 1071
BpiI GAAGAC 2 cut(s) 732, 1003
BpmI CTGGAG 1 cut(s) 1176
BpuEI CTTGAG 2 cut(s) 107, 669
Bsa29I ATCGAT 1 cut(s) 1200
BsaBI GATNNNNATC 1 cut(s) 270
BsaI GGTCTC 3 cut(s) 142, 991, 992
BsaJI CCNNGG 3 cut(s) 456, 705, 831
BsaXI ACNNNNNCTCC 6 cut(s) 702, 732, 810, 840, 1133, 1163
Bsc4I CCNNNNNNNGG 2 cut(s) 742, 776
Bse1I ACTGG 2 cut(s) 1159, 1205
Bse21I CCTNAGG 1 cut(s) 424
Bse8I GATNNNNATC 1 cut(s) 270
BseCI ATCGAT 1 cut(s) 1200
BseDI CCNNGG 3 cut(s) 456, 705, 831
BseGI GGATG 7 cut(s) 39, 112, 478, 732, 751, 910, 1150
BseJI GATNNNNATC 1 cut(s) 270
BseLI CCNNNNNNNGG 2 cut(s) 742, 776
BseMII CTCAG 2 cut(s) 438, 1002
BseNI ACTGG 2 cut(s) 1159, 1205
BseXI GCAGC 2 cut(s) 134, 582
Bsh1236I CGCG 1 cut(s) 764
Bsh1285I CGRYCG 1 cut(s) 1071
BshVI ATCGAT 1 cut(s) 1200
BsiEI CGRYCG 1 cut(s) 1071
BsiHKAI GWGCWC 1 cut(s) 303
BsiHKCI CYCGRG 1 cut(s) 509
BslFI GGGAC 1 cut(s) 554
BslI CCNNNNNNNGG 2 cut(s) 742, 776
BsmAI GTCTC 6 cut(s) 83, 142, 813, 991, 992, 1192
BsmFI GGGAC 1 cut(s) 554
Bso31I GGTCTC 3 cut(s) 142, 991, 992
BsoBI CYCGRG 1 cut(s) 509
Bsp1286I GDGCHC 1 cut(s) 303
Bsp143I GATC 4 cut(s) 309, 513, 1123, 1201
Bsp68I TCGCGA 1 cut(s) 764
BspACI CCGC 3 cut(s) 125, 257, 1071
BspCNI CTCAG 2 cut(s) 437, 1001
BspDI ATCGAT 1 cut(s) 1200
BspFNI CGCG 1 cut(s) 764
BspHI TCATGA 1 cut(s) 229
BspLI GGNNCC 1 cut(s) 719
BspPI GGATC 1 cut(s) 1196
BspTNI GGTCTC 3 cut(s) 142, 991, 992
BsrI ACTGG 2 cut(s) 1159, 1205
BssECI CCNNGG 3 cut(s) 456, 705, 831
BssMI GATC 4 cut(s) 309, 513, 1123, 1201
BssSI CACGAG 1 cut(s) 1095
BssT1I CCWWGG 2 cut(s) 456, 831
Bst2BI CACGAG 1 cut(s) 1095
Bst4CI ACNGT 2 cut(s) 394, 1215
Bst6I CTCTTC 2 cut(s) 1047, 1199
BstC8I GCNNGC 2 cut(s) 138, 593
BstDEI CTNAG 5 cut(s) 29, 142, 424, 872, 988
BstF5I GGATG 7 cut(s) 39, 112, 478, 732, 751, 910, 1150
BstFNI CGCG 1 cut(s) 764
BstKTI GATC 4 cut(s) 312, 516, 1126, 1204
BstMAI GTCTC 6 cut(s) 83, 142, 813, 991, 992, 1192
BstMBI GATC 4 cut(s) 309, 513, 1123, 1201
BstMCI CGRYCG 1 cut(s) 1071
BstMWI GCNNNNNNNGC 2 cut(s) 671, 680
BstNSI RCATGY 2 cut(s) 196, 947
BstUI CGCG 1 cut(s) 764
BstV1I GCAGC 2 cut(s) 134, 582
BstV2I GAAGAC 2 cut(s) 732, 1003
BstX2I RGATCY 2 cut(s) 309, 513
BstYI RGATCY 2 cut(s) 309, 513
Bsu15I ATCGAT 1 cut(s) 1200
Bsu36I CCTNAGG 1 cut(s) 424
BsuTUI ATCGAT 1 cut(s) 1200
BtsCI GGATG 7 cut(s) 39, 112, 478, 732, 751, 910, 1150
BtsI GCAGTG 1 cut(s) 616
BtsIMutI CAGTG 5 cut(s) 399, 616, 1152, 1211, 1212
BtuMI TCGCGA 1 cut(s) 764
Cac8I GCNNGC 2 cut(s) 138, 593
CciI TCATGA 1 cut(s) 229
ClaI ATCGAT 1 cut(s) 1200
Csp6I GTAC 4 cut(s) 382, 495, 656, 1150
CviQI GTAC 4 cut(s) 382, 495, 656, 1150
DdeI CTNAG 5 cut(s) 29, 142, 424, 872, 988
DpnI GATC 4 cut(s) 311, 515, 1125, 1203
DpnII GATC 4 cut(s) 309, 513, 1123, 1201
DraI TTTAAA 1 cut(s) 678
Eam1104I CTCTTC 2 cut(s) 1047, 1199
EarI CTCTTC 2 cut(s) 1047, 1199
Ecl136II GAGCTC 1 cut(s) 301
Eco130I CCWWGG 2 cut(s) 456, 831
Eco24I GRGCYC 1 cut(s) 303
Eco31I GGTCTC 3 cut(s) 142, 991, 992
Eco53kI GAGCTC 1 cut(s) 301
Eco57I CTGAAG 1 cut(s) 543
Eco81I CCTNAGG 1 cut(s) 424
Eco88I CYCGRG 1 cut(s) 509
EcoICRI GAGCTC 1 cut(s) 301
EcoT14I CCWWGG 2 cut(s) 456, 831
EcoT22I ATGCAT 2 cut(s) 39, 490
EcoT38I GRGCYC 1 cut(s) 303
ErhI CCWWGG 2 cut(s) 456, 831
FalI AAGNNNNNCTT 2 cut(s) 1044, 1076
FaqI GGGAC 1 cut(s) 554
FauI CCCGC 1 cut(s) 250
FauNDI CATATG 1 cut(s) 490
Fnu4HI GCNGC 2 cut(s) 123, 596
FokI GGATG 7 cut(s) 46, 99, 485, 719, 758, 917, 1157
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 2 cut(s) 123, 596
FspBI CTAG 5 cut(s) 53, 315, 332, 918, 954
GluI GCNGC 2 cut(s) 123, 596
GsuI CTGGAG 1 cut(s) 1176
HindIII AAGCTT 2 cut(s) 7, 672
HinfI GANTC 1 cut(s) 1031
HphI GGTGA 3 cut(s) 53, 64, 74
Hpy166II GTNNAC 1 cut(s) 1152
Hpy188I TCNGA 2 cut(s) 812, 991
Hpy188III TCNNGA 4 cut(s) 167, 230, 511, 763
Hpy8I GTNNAC 1 cut(s) 1152
HpyAV CCTTC 2 cut(s) 780, 1033
HpyCH4III ACNGT 2 cut(s) 394, 1215
HpyCH4IV ACGT 1 cut(s) 1167
HpyCH4V TGCA 8 cut(s) 37, 98, 122, 182, 226, 488, 609, 665
HpyF10VI GCNNNNNNNGC 2 cut(s) 671, 680
HpyF3I CTNAG 5 cut(s) 29, 142, 424, 872, 988
HpySE526I ACGT 1 cut(s) 1167
Kzo9I GATC 4 cut(s) 309, 513, 1123, 1201
LmnI GCTCC 3 cut(s) 298, 346, 723
LpnPI CCDG 6 cut(s) 180, 411, 577, 880, 1098, 1140
Lsp1109I GCAGC 2 cut(s) 134, 582
LweI GCATC 5 cut(s) 24, 49, 235, 475, 1071
MaeI CTAG 5 cut(s) 53, 315, 332, 918, 954
MaeII ACGT 1 cut(s) 1167
MaeIII GTNAC 2 cut(s) 188, 826
MalI GATC 4 cut(s) 311, 515, 1125, 1203
MboI GATC 4 cut(s) 309, 513, 1123, 1201
MboII GAAGA 8 cut(s) 56, 68, 515, 589, 737, 1003, 1064, 1186
MfeI CAATTG 1 cut(s) 547
MflI RGATCY 2 cut(s) 309, 513
MhlI GDGCHC 1 cut(s) 303
MluCI AATT 8 cut(s) 434, 450, 528, 547, 560, 615, 867, 1023
MmeI TCCRAC 3 cut(s) 757, 790, 906
MnlI CCTC 6 cut(s) 162, 433, 613, 700, 829, 1135
Mph1103I ATGCAT 2 cut(s) 39, 490
MroXI GAANNNNTTC 2 cut(s) 528, 1056
MseI TTAA 5 cut(s) 5, 677, 843, 1062, 1104
MslI CAYNNNNRTG 2 cut(s) 844, 1157
MspA1I CMGCKG 2 cut(s) 125, 1073
MunI CAATTG 1 cut(s) 547
MvnI CGCG 1 cut(s) 764
MwoI GCNNNNNNNGC 2 cut(s) 671, 680
NdeI CATATG 1 cut(s) 490
NdeII GATC 4 cut(s) 309, 513, 1123, 1201
NlaIV GGNNCC 1 cut(s) 719
NmeAIII GCCGAG 1 cut(s) 730
NmuCI GTSAC 1 cut(s) 826
NruI TCGCGA 1 cut(s) 764
NsiI ATGCAT 2 cut(s) 39, 490
NspI RCATGY 2 cut(s) 196, 947
OliI CACNNNNGTG 1 cut(s) 1157
PaeR7I CTCGAG 1 cut(s) 509
PagI TCATGA 1 cut(s) 229
PciI ACATGT 1 cut(s) 192
PdmI GAANNNNTTC 2 cut(s) 528, 1056
PfeI GAWTC 1 cut(s) 1031
PkrI GCNGC 2 cut(s) 124, 597
PscI ACATGT 1 cut(s) 192
Psp124BI GAGCTC 1 cut(s) 303
Psp1406I AACGTT 1 cut(s) 1167
PspN4I GGNNCC 1 cut(s) 719
PsuI RGATCY 2 cut(s) 309, 513
RruI TCGCGA 1 cut(s) 764
RsaI GTAC 4 cut(s) 383, 496, 657, 1151
RsaNI GTAC 4 cut(s) 382, 495, 656, 1150
RseI CAYNNNNRTG 2 cut(s) 844, 1157
SacI GAGCTC 1 cut(s) 303
SaqAI TTAA 5 cut(s) 5, 677, 843, 1062, 1104
SatI GCNGC 2 cut(s) 123, 596
Sau3AI GATC 4 cut(s) 309, 513, 1123, 1201
SduI GDGCHC 1 cut(s) 303
SfaNI GCATC 5 cut(s) 24, 49, 235, 475, 1071
Sfr274I CTCGAG 1 cut(s) 509
SlaI CTCGAG 1 cut(s) 509
SmiMI CAYNNNNRTG 2 cut(s) 844, 1157
SmlI CTYRAG 3 cut(s) 86, 509, 684
SmoI CTYRAG 3 cut(s) 86, 509, 684
Sse9I AATT 8 cut(s) 434, 450, 528, 547, 560, 615, 867, 1023
SsiI CCGC 3 cut(s) 125, 257, 1071
SspMI CTAG 5 cut(s) 53, 315, 332, 918, 954
SstI GAGCTC 1 cut(s) 303
StyI CCWWGG 2 cut(s) 456, 831
TaaI ACNGT 2 cut(s) 394, 1215
TaiI ACGT 1 cut(s) 1170
TaqI TCGA 3 cut(s) 510, 794, 1200
TasI AATT 8 cut(s) 434, 450, 528, 547, 560, 615, 867, 1023
TatI WGTACW 3 cut(s) 381, 655, 1149
TfiI GAWTC 1 cut(s) 1031
Tru1I TTAA 5 cut(s) 5, 677, 843, 1062, 1104
Tru9I TTAA 5 cut(s) 5, 677, 843, 1062, 1104
TscAI CASTG 5 cut(s) 399, 616, 1159, 1212, 1218
TseFI GTSAC 1 cut(s) 826
TseI GCWGC 2 cut(s) 122, 595
Tsp45I GTSAC 1 cut(s) 826
TspRI CASTG 5 cut(s) 399, 616, 1159, 1212, 1218
XapI RAATTY 2 cut(s) 434, 867
XceI RCATGY 2 cut(s) 196, 947
XhoI CTCGAG 1 cut(s) 509
XmnI GAANNNNTTC 2 cut(s) 528, 1056
XspI CTAG 5 cut(s) 53, 315, 332, 918, 954
Zsp2I ATGCAT 2 cut(s) 39, 490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.