Rmu_sc0002670.1_g000004

(-)-germacrene D synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002670.1
OG0000053
Physical Location & Seq
Forward (+)
30564 .. 32889
2326 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002670.1_g000004.1.cds

Sequence Viewer

Length: 1698 bp
atgtctctcaacatggtcagtgtagcttctcaagcccctcctaccctgaatgcctctactgatgccgatagtcgacgttcggctaatttccatcccagcatttggggagatcagtttctgtcttataacaacactatggaaactaacataaatggtgagcaaaatgtccaacaactgaaggaagaagtgaagagaatgctaatggctccgccagttcaaacaagtttgggaaaactggagttgattgatgacattcaacgcttgggtgtgtcttaccattttgaatacgaaattgaccaaactatgcaacaaattcaccacaattttaatggttactgtgatgatgatctgcacacttgtgctcttcgttttcgcttgctgaggcagcatggttacaatgtttcatgcgatacgttcagcaagttcaaggacagtgatggaaaattgaacaaatcgcttcacgatgatgtagtgggactacaaagcttgtatgaagccacacatcttagagtacgaggagaggattttctagaagaagcactaaccttcaccaccacacatctagcgtcggcagtgctagcaaaccgtttaagccccccgctttcgaaacaagtaaggcatgccttgaatcaaccactccggaagggcttaccgaggctagaagcgaggcactacatgtctctccaccaggaactacacggatcacgtaaccaaattttgctgagttttgcaaagctggatttcaacctgctccaacaattgcatcagaaagaactaagtgatattgcaaggtggtggaaggagttggactttgctagcaagctaccttttgcaagagacagagtaattgagtgctacttttggattttgggagtctactttgagcccaagtattactttgccaggaggacactaaccaaagttattgccatgacatccattatcgatgacatttatgatgtgtatggcacgcttgaagaactagacctttttactagagcaattgagaggtgggacatatccgccatggatgaactaccggagtatatgaaagtctgttacgaggcactgttagatgtctatgctgatacagaacaacagcttgcatgcgagggaagattatatcgtatcgattacgcaaaagaagcgatgaagagacaagttagggcgtaccatgctgaagcaaaatggtttcacaagaactacacaccaacaatggatgaatacatggaagtagcccttgtcacttcagcctactcaatgctagcaaccacatcctttgttggaatgggagatatcgttacaaaagactcctttgagtggatcttcagtgaccctaagattgtaaaagcttcatcagtagtttgcagattcatggatgacattgtatcccacaagtttgagcaaaagagaggacatgttgcctcggctgtggaatgttacatgaaacaatacggtgcgacagaagaacaaaccataattgaatttcgtaaacaagtgagtgatgcatggaaggacataaatgaagagtgcctccaccctacacctcttgaaatgccgctcttaatgcgagttctgaatctcacacgcgtgatagatgtagtatacaagtctgaagatggctacactcatgctggaaccattctcaaagattttgtagcttctctacttatcgaacctgtgcctgtgcctgtataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

565

Amino Acids

65.33

Weight (kDa)

5.59

Isoelectric Point (pI)

48.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 126
Acc36I ACCTGC 1 cut(s) 756
AccB7I CCANNNNNTGG 1 cut(s) 102
AccBSI CCGCTC 1 cut(s) 1561
AccI GTMKAC 3 cut(s) 73, 876, 1605
AccII CGCG 1 cut(s) 1590
AccIII TCCGGA 1 cut(s) 639
AciI CCGC 4 cut(s) 209, 599, 1023, 1559
AclWI GGATC 2 cut(s) 709, 1331
AcsI RAATTY 3 cut(s) 312, 714, 1484
AcuI CTGAAG 5 cut(s) 197, 1200, 1233, 1312, 1635
AfaI GTAC 2 cut(s) 513, 1172
AfiI CCNNNNNNNGG 2 cut(s) 102, 1320
AflIII ACRYGT 3 cut(s) 675, 1417, 1588
AjnI CCWGG 2 cut(s) 687, 902
AleI CACNNNNGTG 2 cut(s) 357, 1589
AluBI AGCT 7 cut(s) 26, 486, 736, 823, 1102, 1352, 1661
AluI AGCT 7 cut(s) 26, 486, 736, 823, 1102, 1352, 1661
Alw21I GWGCWC 1 cut(s) 364
Alw26I GTCTC 4 cut(s) 9, 684, 831, 1150
AlwI GGATC 2 cut(s) 709, 1331
AlwNI CAGNNNCTG 1 cut(s) 118
Aor13HI TCCGGA 1 cut(s) 639
ApeKI GCWGC 1 cut(s) 385
ApoI RAATTY 3 cut(s) 312, 714, 1484
AsuHPI GGTGA 3 cut(s) 167, 308, 541
AsuII TTCGAA 1 cut(s) 605
AsuNHI GCTAGC 3 cut(s) 577, 815, 1264
BanII GRGCYC 1 cut(s) 888
Bbv12I GWGCWC 1 cut(s) 364
BbvCI CCTCAGC 1 cut(s) 380
BbvI GCAGC 1 cut(s) 397
BccI CCATC 3 cut(s) 99, 431, 1613
BciT130I CCWGG 2 cut(s) 689, 904
BciVI GTATCC 1 cut(s) 1399
BcoDI GTCTC 4 cut(s) 9, 684, 831, 1150
BfaI CTAG 8 cut(s) 530, 563, 578, 659, 816, 983, 996, 1265
BfuAI ACCTGC 1 cut(s) 756
BfuI GTATCC 1 cut(s) 1399
BisI GCNGC 2 cut(s) 386, 1559
BlsI GCNGC 2 cut(s) 387, 1560
Bme1390I CCNGG 2 cut(s) 689, 904
BmiI GGNNCC 2 cut(s) 207, 1639
BmrFI CCNGG 2 cut(s) 689, 904
BmsI GCATC 3 cut(s) 52, 772, 1495
BmtI GCTAGC 3 cut(s) 581, 819, 1268
BpmI CTGGAG 1 cut(s) 257
Bpu10I CCTNAGC 1 cut(s) 380
Bpu14I TTCGAA 1 cut(s) 605
BpuEI CTTGAG 1 cut(s) 15
Bsa29I ATCGAT 2 cut(s) 945, 1131
BsaAI YACGTR 1 cut(s) 707
BsaBI GATNNNNATC 1 cut(s) 345
BsaJI CCNNGG 3 cut(s) 653, 1026, 1425
BsaWI WCCGGW 2 cut(s) 639, 1039
BsaXI ACNNNNNCTCC 2 cut(s) 1284, 1314
Bsc4I CCNNNNNNNGG 2 cut(s) 102, 1320
Bse1I ACTGG 2 cut(s) 212, 240
Bse8I GATNNNNATC 1 cut(s) 345
BseAI TCCGGA 1 cut(s) 639
BseBI CCWGG 2 cut(s) 689, 904
BseCI ATCGAT 2 cut(s) 945, 1131
BseDI CCNNGG 3 cut(s) 653, 1026, 1425
BseGI GGATG 6 cut(s) 91, 935, 1036, 1225, 1274, 1384
BseJI GATNNNNATC 1 cut(s) 345
BseLI CCNNNNNNNGG 2 cut(s) 102, 1320
BseMII CTCAG 2 cut(s) 371, 713
BseNI ACTGG 2 cut(s) 212, 240
BseRI GAGGAG 1 cut(s) 531
BseXI GCAGC 1 cut(s) 397
BseYI CCCAGC 1 cut(s) 95
BsgI GTGCAG 1 cut(s) 335
Bsh1236I CGCG 1 cut(s) 1590
BshVI ATCGAT 2 cut(s) 945, 1131
BsiHKAI GWGCWC 1 cut(s) 364
BsiSI CCGG 2 cut(s) 640, 1040
BslFI GGGAC 2 cut(s) 489, 1028
BslI CCNNNNNNNGG 2 cut(s) 102, 1320
BsmAI GTCTC 4 cut(s) 9, 684, 831, 1150
BsmFI GGGAC 2 cut(s) 489, 1028
BsmI GAATGC 2 cut(s) 55, 201
Bsp119I TTCGAA 1 cut(s) 605
Bsp1286I GDGCHC 2 cut(s) 364, 888
Bsp13I TCCGGA 1 cut(s) 639
Bsp143I GATC 4 cut(s) 109, 346, 701, 1323
Bsp19I CCATGG 1 cut(s) 1026
BspACI CCGC 4 cut(s) 209, 599, 1023, 1559
BspCNI CTCAG 2 cut(s) 372, 714
BspDI ATCGAT 2 cut(s) 945, 1131
BspEI TCCGGA 1 cut(s) 639
BspFNI CGCG 1 cut(s) 1590
BspLI GGNNCC 2 cut(s) 207, 1639
BspMI ACCTGC 1 cut(s) 756
BspOI GCTAGC 3 cut(s) 581, 819, 1268
BspPI GGATC 2 cut(s) 709, 1331
BspQI GCTCTTC 1 cut(s) 369
BspT104I TTCGAA 1 cut(s) 605
BsrBI CCGCTC 1 cut(s) 1561
BsrI ACTGG 2 cut(s) 212, 240
BssECI CCNNGG 3 cut(s) 653, 1026, 1425
BssMI GATC 4 cut(s) 109, 346, 701, 1323
BssNAI GTATAC 1 cut(s) 1606
BssT1I CCWWGG 1 cut(s) 1026
Bst1107I GTATAC 1 cut(s) 1606
Bst2UI CCWGG 2 cut(s) 689, 904
Bst4CI ACNGT 5 cut(s) 338, 434, 587, 1071, 1457
Bst6I CTCTTC 4 cut(s) 185, 369, 1148, 1521
BstBAI YACGTR 1 cut(s) 707
BstBI TTCGAA 1 cut(s) 605
BstC8I GCNNGC 9 cut(s) 377, 579, 621, 817, 821, 971, 1104, 1108, 1266
BstDEI CTNAG 5 cut(s) 380, 506, 722, 776, 1338
BstDSI CCRYGG 1 cut(s) 1026
BstF5I GGATG 6 cut(s) 91, 935, 1036, 1225, 1274, 1384
BstFNI CGCG 1 cut(s) 1590
BstKTI GATC 4 cut(s) 112, 349, 704, 1326
BstMAI GTCTC 4 cut(s) 9, 684, 831, 1150
BstMBI GATC 4 cut(s) 109, 346, 701, 1323
BstMWI GCNNNNNNNGC 6 cut(s) 32, 385, 578, 1145, 1175, 1567
BstNI CCWGG 2 cut(s) 689, 904
BstNSI RCATGY 4 cut(s) 623, 679, 1110, 1421
BstSCI CCNGG 2 cut(s) 687, 902
BstUI CGCG 1 cut(s) 1590
BstV1I GCAGC 1 cut(s) 397
BstX2I RGATCY 1 cut(s) 1323
BstYI RGATCY 1 cut(s) 1323
BstZ17I GTATAC 1 cut(s) 1606
Bsu15I ATCGAT 2 cut(s) 945, 1131
BsuI GTATCC 1 cut(s) 1399
BsuTUI ATCGAT 2 cut(s) 945, 1131
BtgI CCRYGG 1 cut(s) 1026
BtgZI GCGATG 1 cut(s) 1163
BtsCI GGATG 6 cut(s) 91, 935, 1036, 1225, 1274, 1384
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 5 cut(s) 25, 439, 579, 1067, 1336
BveI ACCTGC 1 cut(s) 756
Cac8I GCNNGC 9 cut(s) 377, 579, 621, 817, 821, 971, 1104, 1108, 1266
CaiI CAGNNNCTG 1 cut(s) 118
ClaI ATCGAT 2 cut(s) 945, 1131
CseI GACGC 1 cut(s) 555
Csp6I GTAC 2 cut(s) 512, 1171
CspCI CAANNNNNGTGG 2 cut(s) 1261, 1296
CviQI GTAC 2 cut(s) 512, 1171
DdeI CTNAG 5 cut(s) 380, 506, 722, 776, 1338
DpnI GATC 4 cut(s) 111, 348, 703, 1325
DpnII GATC 4 cut(s) 109, 346, 701, 1323
Eam1104I CTCTTC 4 cut(s) 185, 369, 1148, 1521
EarI CTCTTC 4 cut(s) 185, 369, 1148, 1521
EciI GGCGGA 2 cut(s) 198, 1012
Eco130I CCWWGG 1 cut(s) 1026
Eco24I GRGCYC 1 cut(s) 888
Eco32I GATATC 1 cut(s) 1297
Eco57I CTGAAG 5 cut(s) 197, 1200, 1233, 1312, 1635
EcoRII CCWGG 2 cut(s) 687, 902
EcoRV GATATC 1 cut(s) 1297
EcoT14I CCWWGG 1 cut(s) 1026
EcoT22I ATGCAT 1 cut(s) 1510
EcoT38I GRGCYC 1 cut(s) 888
ErhI CCWWGG 1 cut(s) 1026
FalI AAGNNNNNCTT 4 cut(s) 881, 913, 1224, 1256
FaqI GGGAC 2 cut(s) 489, 1028
FauI CCCGC 1 cut(s) 606
FblI GTMKAC 3 cut(s) 73, 876, 1605
Fnu4HI GCNGC 2 cut(s) 386, 1559
FokI GGATG 6 cut(s) 78, 922, 1043, 1232, 1261, 1391
FriOI GRGCYC 1 cut(s) 888
Fsp4HI GCNGC 2 cut(s) 386, 1559
FspBI CTAG 8 cut(s) 530, 563, 578, 659, 816, 983, 996, 1265
GluI GCNGC 2 cut(s) 386, 1559
GsaI CCCAGC 1 cut(s) 99
GsuI CTGGAG 1 cut(s) 257
HapII CCGG 2 cut(s) 640, 1040
HgaI GACGC 1 cut(s) 555
HincII GTYRAC 1 cut(s) 74
HindII GTYRAC 1 cut(s) 74
HindIII AAGCTT 2 cut(s) 484, 1350
HinfI GANTC 5 cut(s) 628, 873, 1310, 1371, 1579
HpaII CCGG 2 cut(s) 640, 1040
HphI GGTGA 3 cut(s) 167, 308, 541
Hpy166II GTNNAC 4 cut(s) 74, 877, 1493, 1606
Hpy188I TCNGA 3 cut(s) 768, 1578, 1615
Hpy188III TCNNGA 4 cut(s) 461, 530, 640, 1550
Hpy8I GTNNAC 4 cut(s) 74, 877, 1493, 1606
Hpy99I CGWCG 2 cut(s) 78, 571
HpyAV CCTTC 5 cut(s) 172, 556, 637, 793, 1507
HpyCH4III ACNGT 5 cut(s) 338, 434, 587, 1071, 1457
HpyCH4IV ACGT 3 cut(s) 76, 413, 706
HpyCH4V TGCA 9 cut(s) 307, 352, 731, 763, 788, 833, 1106, 1368, 1508
HpyF10VI GCNNNNNNNGC 6 cut(s) 32, 385, 578, 1145, 1175, 1567
HpyF3I CTNAG 5 cut(s) 380, 506, 722, 776, 1338
HpySE526I ACGT 3 cut(s) 76, 413, 706
Kpn2I TCCGGA 1 cut(s) 639
Kzo9I GATC 4 cut(s) 109, 346, 701, 1323
LguI GCTCTTC 1 cut(s) 369
LmnI GCTCC 2 cut(s) 211, 756
Lsp1109I GCAGC 1 cut(s) 397
LweI GCATC 3 cut(s) 52, 772, 1495
MaeI CTAG 8 cut(s) 530, 563, 578, 659, 816, 983, 996, 1265
MaeII ACGT 3 cut(s) 76, 413, 706
MaeIII GTNAC 8 cut(s) 332, 392, 707, 1058, 1243, 1300, 1331, 1439
MalI GATC 4 cut(s) 111, 348, 703, 1325
MbiI CCGCTC 1 cut(s) 1561
MboI GATC 4 cut(s) 109, 346, 701, 1323
MfeI CAATTG 2 cut(s) 758, 1002
MflI RGATCY 1 cut(s) 1323
MhlI GDGCHC 2 cut(s) 364, 888
MluI ACGCGT 1 cut(s) 1588
MlyI GAGTC 2 cut(s) 882, 1304
MmeI TCCRAC 4 cut(s) 193, 778, 786, 1264
Mph1103I ATGCAT 1 cut(s) 1510
MroI TCCGGA 1 cut(s) 639
MseI TTAA 3 cut(s) 327, 590, 1565
MslI CAYNNNNRTG 3 cut(s) 357, 465, 1589
MspI CCGG 2 cut(s) 640, 1040
MspR9I CCNGG 2 cut(s) 689, 904
MunI CAATTG 2 cut(s) 758, 1002
Mva1269I GAATGC 2 cut(s) 55, 201
MvaI CCWGG 2 cut(s) 689, 904
MvnI CGCG 1 cut(s) 1590
MwoI GCNNNNNNNGC 6 cut(s) 32, 385, 578, 1145, 1175, 1567
NcoI CCATGG 1 cut(s) 1026
NdeII GATC 4 cut(s) 109, 346, 701, 1323
NheI GCTAGC 3 cut(s) 577, 815, 1264
NlaIV GGNNCC 2 cut(s) 207, 1639
NmeAIII GCCGAG 1 cut(s) 1406
NmuCI GTSAC 2 cut(s) 1243, 1331
NsiI ATGCAT 1 cut(s) 1510
NspI RCATGY 4 cut(s) 623, 679, 1110, 1421
NspV TTCGAA 1 cut(s) 605
OliI CACNNNNGTG 2 cut(s) 357, 1589
PaeI GCATGC 2 cut(s) 623, 1110
PciI ACATGT 2 cut(s) 675, 1417
PciSI GCTCTTC 1 cut(s) 369
PctI GAATGC 2 cut(s) 55, 201
PfeI GAWTC 3 cut(s) 628, 1371, 1579
PflMI CCANNNNNTGG 1 cut(s) 102
PkrI GCNGC 2 cut(s) 387, 1560
PleI GAGTC 2 cut(s) 881, 1304
PpsI GAGTC 2 cut(s) 881, 1304
Ppu21I YACGTR 1 cut(s) 707
PscI ACATGT 2 cut(s) 675, 1417
PsiI TTATAA 1 cut(s) 126
Psp6I CCWGG 2 cut(s) 687, 902
PspFI CCCAGC 1 cut(s) 95
PspGI CCWGG 2 cut(s) 687, 902
PspN4I GGNNCC 2 cut(s) 207, 1639
PstNI CAGNNNCTG 1 cut(s) 118
PsuI RGATCY 1 cut(s) 1323
RsaI GTAC 2 cut(s) 513, 1172
RsaNI GTAC 2 cut(s) 512, 1171
RseI CAYNNNNRTG 3 cut(s) 357, 465, 1589
SalI GTCGAC 1 cut(s) 72
SapI GCTCTTC 1 cut(s) 369
SaqAI TTAA 3 cut(s) 327, 590, 1565
SatI GCNGC 2 cut(s) 386, 1559
Sau3AI GATC 4 cut(s) 109, 346, 701, 1323
SchI GAGTC 2 cut(s) 882, 1304
ScrFI CCNGG 2 cut(s) 689, 904
SduI GDGCHC 2 cut(s) 364, 888
SfaNI GCATC 3 cut(s) 52, 772, 1495
SfuI TTCGAA 1 cut(s) 605
SmiMI CAYNNNNRTG 3 cut(s) 357, 465, 1589
SmlI CTYRAG 1 cut(s) 30
SmoI CTYRAG 1 cut(s) 30
SphI GCATGC 2 cut(s) 623, 1110
SsiI CCGC 4 cut(s) 209, 599, 1023, 1559
SspMI CTAG 8 cut(s) 530, 563, 578, 659, 816, 983, 996, 1265
StyD4I CCNGG 2 cut(s) 687, 902
StyI CCWWGG 1 cut(s) 1026
TaaI ACNGT 5 cut(s) 338, 434, 587, 1071, 1457
TaiI ACGT 3 cut(s) 79, 416, 709
TaqI TCGA 5 cut(s) 73, 605, 945, 1131, 1674
TauI GCSGC 1 cut(s) 1561
TfiI GAWTC 3 cut(s) 628, 1371, 1579
Tru1I TTAA 3 cut(s) 327, 590, 1565
Tru9I TTAA 3 cut(s) 327, 590, 1565
TscAI CASTG 5 cut(s) 25, 439, 579, 1074, 1336
TseFI GTSAC 2 cut(s) 1243, 1331
TseI GCWGC 1 cut(s) 385
Tsp45I GTSAC 2 cut(s) 1243, 1331
TspGWI ACGGA 1 cut(s) 714
TspRI CASTG 5 cut(s) 25, 439, 579, 1074, 1336
Van91I CCANNNNNTGG 1 cut(s) 102
XapI RAATTY 3 cut(s) 312, 714, 1484
XbaI TCTAGA 1 cut(s) 529
XceI RCATGY 4 cut(s) 623, 679, 1110, 1421
XcmI CCANNNNNNNNNTGG 1 cut(s) 326
XmiI GTMKAC 3 cut(s) 73, 876, 1605
XspI CTAG 8 cut(s) 530, 563, 578, 659, 816, 983, 996, 1265
Zsp2I ATGCAT 1 cut(s) 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.