RchiOBHm_Chr1g0326331

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000053
Physical Location & Seq
Reverse (-)
14778927 .. 14781057
2131 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55597

Sequence Viewer

Length: 1167 bp
ATGATGATCTCTTCTCTTGGTCCTCCAAGAAACCACACTGTCTCTCGATCTTCTACGGAGTCAGAATATCGTGCCTTGGCTCAAGCCGCTGCTGAAGTTGTCTGGATCTGCAAACTGCTTCGTGACTATCACTTTGTTCTCGCAAAGCCTCCATGCCTTTGGTGTGATAACGTCAGTGCTCTCGCCTTAGCCTCCAATCCAGTCAACCATGCTAGAACAAAGCATATTGATATGGACTACCACTACATCCGTGAAATGGTTCTCAGCAAGTGGTGGAAGGATTTGGACTTTGCAAACAAGCTACCTTTTGCAAGAGACAGGGTAGTTGAGGCCTATTTTTGGGCTTTGGCAATCTACTTTGAGCCGGAATATTCCTTTGCCCGGATGGTGTCAGCCAAAGCTACTGCTATAATTACAGTCATTGACGACATATACGATGTGCAGGGCACGTATGAAGAATTAGAGAACTTTACTGAAGCTATTGAGAGGTGGGACATTTCTGCTGTTGATCAACTGCCAGAATATATGAAAGTGTTTTATAAAGCGCTGTTGAATTTCTTCACCGAGCTTGAAGAAAGTCTAACGAATAAGGGAATCTTATACCGCCTCCACTATGCGAGAGAAGGATTTAAAGTTCAAGTCAGAGCTTACTTCCAGGAAGCAAAATGGTTCAAACAAAAGTACATACCATCAATGGAAGAGTATATGTCTGTGGAACTCTATACATCCTTCTTCATGGTTGCAACAGTGTCATTTGTTGGAATGGGAGTTATTGTTACAAAAGACTCCATGGATTGGGTTTTCAGTGAACCTAAGATTTTAAAGGCCTCATCTATAATTGGCAGACTCATGAATGACCTTGTAGGCCATAAGTTTGAGCAAAAGAGAGAACACATTGCATCAGCCGTGGAATGCTACATGAAGCAATATGGCGTCACAGAAGAAGAAGCAGAAGTCGAGCTAACTAAACAAGTGAATGACGCATGGAAAGACATAAACGAAGAGTGGCTCGATGCCACCTCTATCCCTAGGCCTCTACTCTTGCGGATTTTGAACTTTGCACGTTCTAGTGAAGTTCTATACAAGGGTGAAGATGTGTACACACATTCTGAAAATGTGCTCAAGGGTTATGTAGTTTCACTCTTTATCGAACCCGTGCCCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

388

Amino Acids

45.13

Weight (kDa)

5.29

Isoelectric Point (pI)

47.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth_C PF03936 93 - 331 2.4e-98 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 133 - 331 7.6e-59 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 540
AccB7I CCANNNNNTGG 1 cut(s) 795
AciI CCGC 3 cut(s) 87, 604, 1045
AclWI GGATC 1 cut(s) 113
AcsI RAATTY 1 cut(s) 553
AcuI CTGAAG 2 cut(s) 114, 495
AcyI GRCGYC 1 cut(s) 933
AfaI GTAC 2 cut(s) 683, 1100
AfeI AGCGCT 1 cut(s) 546
AfiI CCNNNNNNNGG 4 cut(s) 256, 339, 381, 795
AgsI TTSAA 5 cut(s) 553, 572, 638, 673, 1054
AjnI CCWGG 1 cut(s) 654
AloI GAACNNNNNNTCC 2 cut(s) 618, 650
AluBI AGCT 6 cut(s) 301, 401, 479, 568, 647, 961
AluI AGCT 6 cut(s) 301, 401, 479, 568, 647, 961
Alw21I GWGCWC 2 cut(s) 181, 1122
Alw26I GTCTC 2 cut(s) 46, 309
AlwI GGATC 1 cut(s) 113
Aor51HI AGCGCT 1 cut(s) 546
AoxI GGCC 4 cut(s) 330, 825, 865, 1031
ApeKI GCWGC 1 cut(s) 89
ApoI RAATTY 1 cut(s) 553
ArsI GACNNNNNNTTYG 2 cut(s) 116, 148
Asp700I GAANNNNTTC 2 cut(s) 258, 557
AspA2I CCTAGG 1 cut(s) 1028
AspLEI GCGC 1 cut(s) 547
AspS9I GGNCC 1 cut(s) 20
AsuC2I CCSGG 1 cut(s) 382
AsuHPI GGTGA 2 cut(s) 553, 1100
AvaII GGWCC 1 cut(s) 20
AvrII CCTAGG 1 cut(s) 1028
BaeGI GKGCMC 2 cut(s) 449, 1161
Bbv12I GWGCWC 2 cut(s) 181, 1122
BbvI GCAGC 1 cut(s) 76
BccI CCATC 2 cut(s) 379, 697
BceAI ACGGC 1 cut(s) 890
BciT130I CCWGG 1 cut(s) 656
BclI TGATCA 1 cut(s) 508
BcnI CCSGG 1 cut(s) 382
BcoDI GTCTC 2 cut(s) 46, 309
BfaI CTAG 3 cut(s) 213, 1029, 1068
BfoI RGCGCY 1 cut(s) 548
BisI GCNGC 2 cut(s) 87, 90
BlnI CCTAGG 1 cut(s) 1028
BlsI GCNGC 2 cut(s) 88, 91
Bme1390I CCNGG 2 cut(s) 382, 656
Bme18I GGWCC 1 cut(s) 20
BmgT120I GGNCC 1 cut(s) 20
BmrFI CCNGG 2 cut(s) 382, 656
BmsI GCATC 2 cut(s) 908, 1003
Bpu10I CCTNAGC 1 cut(s) 187
BpuEI CTTGAG 2 cut(s) 66, 1106
BpuMI CCSGG 1 cut(s) 382
BsaAI YACGTR 1 cut(s) 450
BsaHI GRCGYC 1 cut(s) 933
BsaJI CCNNGG 4 cut(s) 75, 789, 906, 1028
BsaXI ACNNNNNCTCC 2 cut(s) 759, 789
Bsc4I CCNNNNNNNGG 4 cut(s) 256, 339, 381, 795
Bse1I ACTGG 1 cut(s) 200
Bse3DI GCAATG 1 cut(s) 894
BseBI CCWGG 1 cut(s) 656
BseDI CCNNGG 4 cut(s) 75, 789, 906, 1028
BseGI GGATG 3 cut(s) 246, 390, 725
BseLI CCNNNNNNNGG 4 cut(s) 256, 339, 381, 795
BseMI GCAATG 1 cut(s) 894
BseMII CTCAG 1 cut(s) 277
BseNI ACTGG 1 cut(s) 200
BseSI GKGCMC 2 cut(s) 449, 1161
BseXI GCAGC 1 cut(s) 76
BsgI GTGCAG 1 cut(s) 461
BshFI GGCC 4 cut(s) 332, 827, 867, 1033
BsiHKAI GWGCWC 2 cut(s) 181, 1122
BsiSI CCGG 2 cut(s) 365, 382
BslFI GGGAC 1 cut(s) 506
BslI CCNNNNNNNGG 4 cut(s) 256, 339, 381, 795
BsmAI GTCTC 2 cut(s) 46, 309
BsmFI GGGAC 1 cut(s) 506
BsmI GAATGC 1 cut(s) 917
BsnI GGCC 4 cut(s) 332, 827, 867, 1033
Bsp1286I GDGCHC 4 cut(s) 181, 449, 1122, 1161
Bsp1407I TGTACA 1 cut(s) 1098
Bsp143I GATC 4 cut(s) 6, 47, 105, 508
Bsp19I CCATGG 1 cut(s) 789
BspACI CCGC 3 cut(s) 87, 604, 1045
BspANI GGCC 4 cut(s) 332, 827, 867, 1033
BspCNI CTCAG 1 cut(s) 276
BspHI TCATGA 1 cut(s) 849
BspPI GGATC 1 cut(s) 113
BsrDI GCAATG 1 cut(s) 894
BsrGI TGTACA 1 cut(s) 1098
BsrI ACTGG 1 cut(s) 200
BssECI CCNNGG 4 cut(s) 75, 789, 906, 1028
BssMI GATC 4 cut(s) 6, 47, 105, 508
BssNI GRCGYC 1 cut(s) 933
BssT1I CCWWGG 3 cut(s) 75, 789, 1028
Bst2UI CCWGG 1 cut(s) 656
Bst4CI ACNGT 3 cut(s) 40, 418, 748
Bst6I CTCTTC 3 cut(s) 16, 693, 996
BstACI GRCGYC 1 cut(s) 933
BstAUI TGTACA 1 cut(s) 1098
BstBAI YACGTR 1 cut(s) 450
BstDEI CTNAG 3 cut(s) 187, 263, 813
BstDSI CCRYGG 2 cut(s) 789, 906
BstF5I GGATG 3 cut(s) 246, 390, 725
BstH2I RGCGCY 1 cut(s) 548
BstHHI GCGC 1 cut(s) 547
BstKTI GATC 4 cut(s) 9, 50, 108, 511
BstMAI GTCTC 2 cut(s) 46, 309
BstMBI GATC 4 cut(s) 6, 47, 105, 508
BstMWI GCNNNNNNNGC 1 cut(s) 86
BstNI CCWGG 1 cut(s) 656
BstSCI CCNGG 2 cut(s) 380, 654
BstSLI GKGCMC 2 cut(s) 449, 1161
BstV1I GCAGC 1 cut(s) 76
BstX2I RGATCY 1 cut(s) 105
BstXI CCANNNNNNTGG 1 cut(s) 159
BstYI RGATCY 1 cut(s) 105
BsuRI GGCC 4 cut(s) 332, 827, 867, 1033
BtgI CCRYGG 2 cut(s) 789, 906
BtsCI GGATG 3 cut(s) 246, 390, 725
BtsIMutI CAGTG 4 cut(s) 36, 181, 753, 811
CciI TCATGA 1 cut(s) 849
CfoI GCGC 1 cut(s) 547
Cfr13I GGNCC 1 cut(s) 20
CseI GACGC 2 cut(s) 922, 989
Csp6I GTAC 2 cut(s) 682, 1099
CviAII CATG 7 cut(s) 153, 209, 736, 790, 850, 919, 984
CviQI GTAC 2 cut(s) 682, 1099
DdeI CTNAG 3 cut(s) 187, 263, 813
DpnI GATC 4 cut(s) 8, 49, 107, 510
DpnII GATC 4 cut(s) 6, 47, 105, 508
DraI TTTAAA 2 cut(s) 631, 822
Eam1104I CTCTTC 3 cut(s) 16, 693, 996
EarI CTCTTC 3 cut(s) 16, 693, 996
Eco130I CCWWGG 3 cut(s) 75, 789, 1028
Eco147I AGGCCT 3 cut(s) 332, 827, 1033
Eco47I GGWCC 1 cut(s) 20
Eco47III AGCGCT 1 cut(s) 546
Eco57I CTGAAG 2 cut(s) 114, 495
EcoRII CCWGG 1 cut(s) 654
EcoT14I CCWWGG 3 cut(s) 75, 789, 1028
ErhI CCWWGG 3 cut(s) 75, 789, 1028
FaeI CATG 7 cut(s) 156, 212, 739, 793, 853, 922, 987
FalI AAGNNNNNCTT 2 cut(s) 581, 613
FaqI GGGAC 1 cut(s) 506
FatI CATG 7 cut(s) 152, 208, 735, 789, 849, 918, 983
FbaI TGATCA 1 cut(s) 508
Fnu4HI GCNGC 2 cut(s) 87, 90
FokI GGATG 3 cut(s) 233, 397, 712
Fsp4HI GCNGC 2 cut(s) 87, 90
FspBI CTAG 3 cut(s) 213, 1029, 1068
GlaI GCGC 1 cut(s) 546
GluI GCNGC 2 cut(s) 87, 90
HaeII RGCGCY 1 cut(s) 548
HaeIII GGCC 4 cut(s) 332, 827, 867, 1033
HapII CCGG 2 cut(s) 365, 382
HgaI GACGC 2 cut(s) 922, 989
HhaI GCGC 1 cut(s) 547
Hin1I GRCGYC 1 cut(s) 933
Hin1II CATG 7 cut(s) 156, 212, 739, 793, 853, 922, 987
Hin6I GCGC 1 cut(s) 545
HinP1I GCGC 1 cut(s) 545
HincII GTYRAC 1 cut(s) 205
HindII GTYRAC 1 cut(s) 205
HinfI GANTC 4 cut(s) 59, 594, 785, 846
HpaII CCGG 2 cut(s) 365, 382
HphI GGTGA 2 cut(s) 553, 1100
Hpy166II GTNNAC 4 cut(s) 205, 809, 1099, 1101
Hpy188I TCNGA 3 cut(s) 64, 644, 1111
Hpy188III TCNNGA 4 cut(s) 45, 103, 122, 850
Hpy8I GTNNAC 4 cut(s) 205, 809, 1099, 1101
HpyAV CCTTC 3 cut(s) 271, 617, 739
HpyCH4III ACNGT 3 cut(s) 40, 418, 748
HpyCH4IV ACGT 3 cut(s) 171, 449, 1063
HpyCH4V TGCA 7 cut(s) 111, 293, 311, 442, 743, 899, 1061
HpyF10VI GCNNNNNNNGC 1 cut(s) 86
HpyF3I CTNAG 3 cut(s) 187, 263, 813
HpySE526I ACGT 3 cut(s) 171, 449, 1063
Hsp92I GRCGYC 1 cut(s) 933
Hsp92II CATG 7 cut(s) 156, 212, 739, 793, 853, 922, 987
HspAI GCGC 1 cut(s) 545
Ksp22I TGATCA 1 cut(s) 508
Kzo9I GATC 4 cut(s) 6, 47, 105, 508
LpnPI CCDG 9 cut(s) 88, 213, 304, 378, 395, 428, 531, 641, 668
Lsp1109I GCAGC 1 cut(s) 76
LweI GCATC 2 cut(s) 908, 1003
MaeI CTAG 3 cut(s) 213, 1029, 1068
MaeII ACGT 3 cut(s) 171, 449, 1063
MaeIII GTNAC 3 cut(s) 122, 775, 934
MalI GATC 4 cut(s) 8, 49, 107, 510
MboI GATC 4 cut(s) 6, 47, 105, 508
MflI RGATCY 1 cut(s) 105
MhlI GDGCHC 4 cut(s) 181, 449, 1122, 1161
MluCI AATT 4 cut(s) 411, 458, 553, 837
MlyI GAGTC 3 cut(s) 68, 779, 840
MmeI TCCRAC 1 cut(s) 739
MnlI CCTC 9 cut(s) 33, 159, 202, 322, 480, 617, 838, 1030, 1044
MroXI GAANNNNTTC 2 cut(s) 258, 557
MseI TTAA 2 cut(s) 630, 821
MspA1I CMGCKG 1 cut(s) 89
MspI CCGG 2 cut(s) 365, 382
MspR9I CCNGG 2 cut(s) 382, 656
Mva1269I GAATGC 1 cut(s) 917
MvaI CCWGG 1 cut(s) 656
MwoI GCNNNNNNNGC 1 cut(s) 86
NciI CCSGG 1 cut(s) 382
NcoI CCATGG 1 cut(s) 789
NdeII GATC 4 cut(s) 6, 47, 105, 508
NlaIII CATG 7 cut(s) 156, 212, 739, 793, 853, 922, 987
NmuCI GTSAC 2 cut(s) 122, 934
PagI TCATGA 1 cut(s) 849
PceI AGGCCT 3 cut(s) 332, 827, 1033
PcsI WCGNNNNNNNCGW 1 cut(s) 432
PctI GAATGC 1 cut(s) 917
PdmI GAANNNNTTC 2 cut(s) 258, 557
PfeI GAWTC 1 cut(s) 594
PflMI CCANNNNNTGG 1 cut(s) 795
PfoI TCCNGGA 1 cut(s) 654
PkrI GCNGC 2 cut(s) 88, 91
PleI GAGTC 3 cut(s) 67, 779, 840
PpsI GAGTC 3 cut(s) 67, 779, 840
Ppu21I YACGTR 1 cut(s) 450
PsiI TTATAA 1 cut(s) 540
Psp6I CCWGG 1 cut(s) 654
PspGI CCWGG 1 cut(s) 654
PspPI GGNCC 1 cut(s) 20
PsuI RGATCY 1 cut(s) 105
RsaI GTAC 2 cut(s) 683, 1100
RsaNI GTAC 2 cut(s) 682, 1099
SaqAI TTAA 2 cut(s) 630, 821
SatI GCNGC 2 cut(s) 87, 90
Sau3AI GATC 4 cut(s) 6, 47, 105, 508
Sau96I GGNCC 1 cut(s) 20
SchI GAGTC 3 cut(s) 68, 779, 840
ScrFI CCNGG 2 cut(s) 382, 656
SduI GDGCHC 4 cut(s) 181, 449, 1122, 1161
SfaNI GCATC 2 cut(s) 908, 1003
SinI GGWCC 1 cut(s) 20
SmlI CTYRAG 2 cut(s) 81, 1121
SmoI CTYRAG 2 cut(s) 81, 1121
Sse9I AATT 4 cut(s) 411, 458, 553, 837
SseBI AGGCCT 3 cut(s) 332, 827, 1033
SsiI CCGC 3 cut(s) 87, 604, 1045
SspI AATATT 1 cut(s) 371
SspMI CTAG 3 cut(s) 213, 1029, 1068
StuI AGGCCT 3 cut(s) 332, 827, 1033
StyD4I CCNGG 2 cut(s) 380, 654
StyI CCWWGG 3 cut(s) 75, 789, 1028
TaaI ACNGT 3 cut(s) 40, 418, 748
TaiI ACGT 3 cut(s) 174, 452, 1066
TaqI TCGA 4 cut(s) 46, 957, 1011, 1149
TasI AATT 4 cut(s) 411, 458, 553, 837
TatI WGTACW 2 cut(s) 681, 1098
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 1 cut(s) 594
Tru1I TTAA 2 cut(s) 630, 821
Tru9I TTAA 2 cut(s) 630, 821
TscAI CASTG 4 cut(s) 43, 181, 753, 811
TseFI GTSAC 2 cut(s) 122, 934
TseI GCWGC 1 cut(s) 89
Tsp45I GTSAC 2 cut(s) 122, 934
TspDTI ATGAA 5 cut(s) 468, 542, 724, 866, 935
TspGWI ACGGA 2 cut(s) 71, 239
TspRI CASTG 4 cut(s) 43, 181, 753, 811
Van91I CCANNNNNTGG 1 cut(s) 795
VpaK11BI GGWCC 1 cut(s) 20
XapI RAATTY 1 cut(s) 553
XmaJI CCTAGG 1 cut(s) 1028
XmnI GAANNNNTTC 2 cut(s) 258, 557
XspI CTAG 3 cut(s) 213, 1029, 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.