Rh5CG331000

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000053
Physical Location & Seq
Reverse (-)
37171008 .. 37172919
1912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG331000.1

Sequence Viewer

Length: 1194 bp
ATGTCTATGGCTACAGATCCTTCCCCATCAAGTCAAGTACCACAAATTGCTAAGCCTGAAATTGTTCGCCAGACAGCGAATTTTCAACCAAGCATTTGGGGAGATCAGTTCATCAACTATGATTCTCAAGACATTAAGACTGAGGCCCTTTGGCAACAAGAAGTCGAGGAACTGAAAGTAGTAGTGAAGAGGGAAGTACGTATTTACAAATGGGCCGGGAAAGGTGATTTTTCCCATCAACTCAAGTTGATCGATGCAATCCAACGCCTTGGCGTGGCATACCATTTTGAACAAGAAATAGAATATGCACTGCAACACATCCATGCTACATATCATGATCAGGATCACTACCGTGATAATGGCGATCTTTACACTACCGCGCTATGTTTTCGATTGCTAAGGCAACATGGATATGATATCTCATCTGATATATTCAACAAGTTCAAAGATGCAAATGGTAGCTTCAAAGAAGGCTTAGTTGTCGATGGGTCAGCTATGCTGAGCCTCTACGAAGCTGCACATCTTAAGGTTCATGGAGAAGATATACTAGAAGAGGCTCTTGTTTTCACCACTACTCACCTCGAGTCCGCAAAATCCAATGCGTGCTATGGAGTACAAATGACTGGACAAATCACTCAAGCCTTGGCGAGACCTCTGCGAAAAAGTCTAGAGAGGATATGTGCCAAGCGTCACATGTCAATTTACCAACATGAAGATGAAGCCTCACTCATCAACCACAATGAAGCTTTATTGAGACTTGCAAAGTTGGATTTCAATCTTGTTCAGTCTTTACACAAAAAAGAGTTGTGTGAAATTACTAGGTGGTGGAAAGAACTAGACTTTGAAAGGAAATTGCCTTTTGCAAGAGACAGGAAGGTGGAGTTGTTCTTTTGGATAGTGGGAGTATATTTTGAACCCCAGTACTCTACTGGCAGAACCATTATGACAAAAGTGTCTATCCTCCTAACTGTTTTGGATGATATATATGACGCATATGGTACATTTGAAGAACTCGTGATCTTTACTGAAGCAATTGACAGGTGGGATGTCAAATGCATAGATGAGCTCCCGGACTATTTGAAAATATTCTATCATGAACTTTTGAATCTTTTCAATGATATTGACAAAGTGATGTCAAAGGAAGGAAAATCTTACCGAGTTTGCTACGCAATACAAGCTGTACGTAATGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

397

Amino Acids

46.21

Weight (kDa)

5.63

Isoelectric Point (pI)

41.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 32 - 215 6.3e-58 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 277 - 392 1.1e-46 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 317 - 385 4.7e-14 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 952
AccII CGCG 1 cut(s) 380
AciI CCGC 2 cut(s) 378, 588
AclWI GGATC 2 cut(s) 11, 351
AcsI RAATTY 1 cut(s) 79
AcuI CTGAAG 1 cut(s) 1047
AfaI GTAC 6 cut(s) 39, 198, 615, 923, 1000, 1182
AfiI CCNNNNNNNGG 1 cut(s) 274
AflII CTTAAG 1 cut(s) 524
AflIII ACRYGT 1 cut(s) 693
AleI CACNNNNGTG 1 cut(s) 351
AluBI AGCT 6 cut(s) 462, 494, 515, 746, 1066, 1178
AluI AGCT 6 cut(s) 462, 494, 515, 746, 1066, 1178
Alw21I GWGCWC 1 cut(s) 1068
Alw26I GTCTC 3 cut(s) 643, 748, 861
AlwI GGATC 2 cut(s) 11, 351
Ama87I CYCGRG 1 cut(s) 581
AoxI GGCC 2 cut(s) 144, 213
ApeKI GCWGC 1 cut(s) 515
ApoI RAATTY 1 cut(s) 79
Asp700I GAANNNNTTC 3 cut(s) 63, 1085, 1109
AspLEI GCGC 1 cut(s) 382
AspS9I GGNCC 2 cut(s) 145, 213
AsuC2I CCSGG 2 cut(s) 217, 1070
AsuHPI GGTGA 3 cut(s) 236, 559, 569
AvaI CYCGRG 1 cut(s) 581
BanII GRGCYC 1 cut(s) 1068
BauI CACGAG 1 cut(s) 1013
Bbv12I GWGCWC 1 cut(s) 1068
BbvI GCAGC 1 cut(s) 502
BccI CCATC 3 cut(s) 34, 243, 479
BcgI CGANNNNNNTGC 2 cut(s) 637, 671
BclI TGATCA 1 cut(s) 337
BcnI CCSGG 2 cut(s) 217, 1070
BcoDI GTCTC 3 cut(s) 643, 748, 861
BfaI CTAG 4 cut(s) 548, 668, 819, 836
BfmI CTRYAG 1 cut(s) 12
BfrI CTTAAG 1 cut(s) 524
BisI GCNGC 1 cut(s) 516
BlpI GCTNAGC 2 cut(s) 51, 500
BlsI GCNGC 1 cut(s) 517
BmcAI AGTACT 1 cut(s) 923
Bme1390I CCNGG 2 cut(s) 217, 1070
BmeT110I CYCGRG 1 cut(s) 581
BmgT120I GGNCC 2 cut(s) 145, 213
BmrFI CCNGG 2 cut(s) 217, 1070
BmrI ACTGGG 1 cut(s) 913
BmsI GCATC 2 cut(s) 244, 439
BmuI ACTGGG 1 cut(s) 913
Bpu10I CCTNAGC 1 cut(s) 398
Bpu1102I GCTNAGC 2 cut(s) 51, 500
BpuEI CTTGAG 3 cut(s) 111, 227, 621
BpuMI CCSGG 2 cut(s) 217, 1070
Bsa29I ATCGAT 1 cut(s) 252
BsaAI YACGTR 2 cut(s) 200, 1184
BsaBI GATNNNNATC 2 cut(s) 342, 774
BsaI GGTCTC 1 cut(s) 643
BsaJI CCNNGG 2 cut(s) 268, 642
Bsc4I CCNNNNNNNGG 1 cut(s) 274
Bse1I ACTGG 3 cut(s) 628, 919, 934
Bse8I GATNNNNATC 2 cut(s) 342, 774
BseCI ATCGAT 1 cut(s) 252
BseDI CCNNGG 2 cut(s) 268, 642
BseGI GGATG 3 cut(s) 318, 982, 1051
BseJI GATNNNNATC 2 cut(s) 342, 774
BseLI CCNNNNNNNGG 1 cut(s) 274
BseMII CTCAG 2 cut(s) 132, 491
BseNI ACTGG 3 cut(s) 628, 919, 934
BseXI GCAGC 1 cut(s) 502
BsgI GTGCAG 1 cut(s) 501
Bsh1236I CGCG 1 cut(s) 380
BshFI GGCC 2 cut(s) 146, 215
BshVI ATCGAT 1 cut(s) 252
BsiHKAI GWGCWC 1 cut(s) 1068
BsiHKCI CYCGRG 1 cut(s) 581
BsiSI CCGG 2 cut(s) 216, 1070
BslI CCNNNNNNNGG 1 cut(s) 274
BsmAI GTCTC 3 cut(s) 643, 748, 861
BsnI GGCC 2 cut(s) 146, 215
Bso31I GGTCTC 1 cut(s) 643
BsoBI CYCGRG 1 cut(s) 581
Bsp1286I GDGCHC 1 cut(s) 1068
Bsp143I GATC 7 cut(s) 16, 103, 249, 337, 343, 364, 1017
Bsp1720I GCTNAGC 2 cut(s) 51, 500
BspACI CCGC 2 cut(s) 378, 588
BspANI GGCC 2 cut(s) 146, 215
BspCNI CTCAG 2 cut(s) 133, 492
BspDI ATCGAT 1 cut(s) 252
BspFNI CGCG 1 cut(s) 380
BspHI TCATGA 2 cut(s) 334, 1093
BspPI GGATC 2 cut(s) 11, 351
BspTI CTTAAG 1 cut(s) 524
BspTNI GGTCTC 1 cut(s) 643
BsrI ACTGG 3 cut(s) 628, 919, 934
BssECI CCNNGG 2 cut(s) 268, 642
BssMI GATC 7 cut(s) 16, 103, 249, 337, 343, 364, 1017
BssSI CACGAG 1 cut(s) 1013
BssT1I CCWWGG 2 cut(s) 268, 642
Bst2BI CACGAG 1 cut(s) 1013
Bst4CI ACNGT 2 cut(s) 353, 970
Bst6I CTCTTC 2 cut(s) 182, 546
BstAFI CTTAAG 1 cut(s) 524
BstBAI YACGTR 2 cut(s) 200, 1184
BstC8I GCNNGC 1 cut(s) 604
BstDEI CTNAG 5 cut(s) 51, 141, 398, 475, 500
BstF5I GGATG 3 cut(s) 318, 982, 1051
BstFNI CGCG 1 cut(s) 380
BstHHI GCGC 1 cut(s) 382
BstKTI GATC 7 cut(s) 19, 106, 252, 340, 346, 367, 1020
BstMAI GTCTC 3 cut(s) 643, 748, 861
BstMBI GATC 7 cut(s) 16, 103, 249, 337, 343, 364, 1017
BstMWI GCNNNNNNNGC 1 cut(s) 1175
BstNSI RCATGY 1 cut(s) 697
BstSCI CCNGG 2 cut(s) 215, 1068
BstSFI CTRYAG 1 cut(s) 12
BstSNI TACGTA 2 cut(s) 200, 1184
BstUI CGCG 1 cut(s) 380
BstV1I GCAGC 1 cut(s) 502
BstX2I RGATCY 1 cut(s) 16
BstXI CCANNNNNNTGG 2 cut(s) 96, 269
BstYI RGATCY 1 cut(s) 16
Bsu15I ATCGAT 1 cut(s) 252
BsuRI GGCC 2 cut(s) 146, 215
BsuTUI ATCGAT 1 cut(s) 252
BtsCI GGATG 3 cut(s) 318, 982, 1051
BtsI GCAGTG 1 cut(s) 308
BtsIMutI CAGTG 1 cut(s) 308
Cac8I GCNNGC 1 cut(s) 604
CciI TCATGA 2 cut(s) 334, 1093
CfoI GCGC 1 cut(s) 382
Cfr13I GGNCC 2 cut(s) 145, 213
ClaI ATCGAT 1 cut(s) 252
CseI GACGC 2 cut(s) 677, 998
Csp6I GTAC 6 cut(s) 38, 197, 614, 922, 999, 1181
CviAII CATG 8 cut(s) 323, 335, 407, 533, 694, 710, 1094, 1191
CviQI GTAC 6 cut(s) 38, 197, 614, 922, 999, 1181
DdeI CTNAG 5 cut(s) 51, 141, 398, 475, 500
DpnI GATC 7 cut(s) 18, 105, 251, 339, 345, 366, 1019
DpnII GATC 7 cut(s) 16, 103, 249, 337, 343, 364, 1017
DrdI GACNNNNNNGTC 1 cut(s) 952
DseDI GACNNNNNNGTC 1 cut(s) 952
Eam1104I CTCTTC 2 cut(s) 182, 546
EarI CTCTTC 2 cut(s) 182, 546
Ecl136II GAGCTC 1 cut(s) 1066
Eco105I TACGTA 2 cut(s) 200, 1184
Eco130I CCWWGG 2 cut(s) 268, 642
Eco24I GRGCYC 1 cut(s) 1068
Eco31I GGTCTC 1 cut(s) 643
Eco32I GATATC 1 cut(s) 418
Eco53kI GAGCTC 1 cut(s) 1066
Eco57I CTGAAG 1 cut(s) 1047
Eco88I CYCGRG 1 cut(s) 581
EcoICRI GAGCTC 1 cut(s) 1066
EcoO109I RGGNCCY 1 cut(s) 145
EcoRV GATATC 1 cut(s) 418
EcoT14I CCWWGG 2 cut(s) 268, 642
EcoT22I ATGCAT 2 cut(s) 1058, 1192
EcoT38I GRGCYC 1 cut(s) 1068
ErhI CCWWGG 2 cut(s) 268, 642
FaeI CATG 8 cut(s) 326, 338, 410, 536, 697, 713, 1097, 1194
FalI AAGNNNNNCTT 2 cut(s) 543, 575
FatI CATG 8 cut(s) 322, 334, 406, 532, 693, 709, 1093, 1190
FauNDI CATATG 1 cut(s) 994
FbaI TGATCA 1 cut(s) 337
Fnu4HI GCNGC 1 cut(s) 516
FokI GGATG 3 cut(s) 305, 989, 1058
FriOI GRGCYC 1 cut(s) 1068
Fsp4HI GCNGC 1 cut(s) 516
FspBI CTAG 4 cut(s) 548, 668, 819, 836
GlaI GCGC 1 cut(s) 381
GluI GCNGC 1 cut(s) 516
HaeIII GGCC 2 cut(s) 146, 215
HapII CCGG 2 cut(s) 216, 1070
HgaI GACGC 2 cut(s) 677, 998
HhaI GCGC 1 cut(s) 382
Hin1II CATG 8 cut(s) 326, 338, 410, 536, 697, 713, 1097, 1194
Hin6I GCGC 1 cut(s) 380
HinP1I GCGC 1 cut(s) 380
HindIII AAGCTT 1 cut(s) 744
HinfI GANTC 3 cut(s) 122, 584, 1105
HpaII CCGG 2 cut(s) 216, 1070
HphI GGTGA 3 cut(s) 236, 559, 569
Hpy188I TCNGA 1 cut(s) 427
Hpy188III TCNNGA 6 cut(s) 128, 335, 341, 668, 1015, 1094
HpyAV CCTTC 4 cut(s) 30, 464, 868, 1136
HpyCH4III ACNGT 2 cut(s) 353, 970
HpyCH4IV ACGT 2 cut(s) 199, 1183
HpyCH4V TGCA 9 cut(s) 257, 308, 313, 452, 518, 761, 863, 1056, 1190
HpyF10VI GCNNNNNNNGC 1 cut(s) 1175
HpyF3I CTNAG 5 cut(s) 51, 141, 398, 475, 500
HpySE526I ACGT 2 cut(s) 199, 1183
Hsp92II CATG 8 cut(s) 326, 338, 410, 536, 697, 713, 1097, 1194
HspAI GCGC 1 cut(s) 380
Ksp22I TGATCA 1 cut(s) 337
Kzo9I GATC 7 cut(s) 16, 103, 249, 337, 343, 364, 1017
LmnI GCTCC 1 cut(s) 1071
Lsp1109I GCAGC 1 cut(s) 502
LweI GCATC 2 cut(s) 244, 439
MaeI CTAG 4 cut(s) 548, 668, 819, 836
MaeII ACGT 2 cut(s) 199, 1183
MaeIII GTNAC 1 cut(s) 689
MalI GATC 7 cut(s) 18, 105, 251, 339, 345, 366, 1019
MboI GATC 7 cut(s) 16, 103, 249, 337, 343, 364, 1017
MboII GAAGA 5 cut(s) 199, 551, 563, 725, 1019
MfeI CAATTG 1 cut(s) 1032
MflI RGATCY 1 cut(s) 16
MhlI GDGCHC 1 cut(s) 1068
MluCI AATT 7 cut(s) 45, 60, 79, 699, 813, 851, 1032
MlyI GAGTC 1 cut(s) 593
MmeI TCCRAC 2 cut(s) 286, 747
Mph1103I ATGCAT 2 cut(s) 1058, 1192
MroXI GAANNNNTTC 3 cut(s) 63, 1085, 1109
MseI TTAA 2 cut(s) 135, 525
MslI CAYNNNNRTG 4 cut(s) 321, 351, 411, 714
MspCI CTTAAG 1 cut(s) 524
MspI CCGG 2 cut(s) 216, 1070
MspR9I CCNGG 2 cut(s) 217, 1070
MunI CAATTG 1 cut(s) 1032
MvnI CGCG 1 cut(s) 380
MwoI GCNNNNNNNGC 1 cut(s) 1175
NciI CCSGG 2 cut(s) 217, 1070
NdeI CATATG 1 cut(s) 994
NdeII GATC 7 cut(s) 16, 103, 249, 337, 343, 364, 1017
NlaIII CATG 8 cut(s) 326, 338, 410, 536, 697, 713, 1097, 1194
NmuCI GTSAC 1 cut(s) 689
NsiI ATGCAT 2 cut(s) 1058, 1192
NspI RCATGY 1 cut(s) 697
OliI CACNNNNGTG 1 cut(s) 351
PaeR7I CTCGAG 1 cut(s) 581
PagI TCATGA 2 cut(s) 334, 1093
PciI ACATGT 1 cut(s) 693
PdmI GAANNNNTTC 3 cut(s) 63, 1085, 1109
PfeI GAWTC 2 cut(s) 122, 1105
PfoI TCCNGGA 1 cut(s) 1068
PkrI GCNGC 1 cut(s) 517
PleI GAGTC 1 cut(s) 592
PpsI GAGTC 1 cut(s) 592
Ppu21I YACGTR 2 cut(s) 200, 1184
PscI ACATGT 1 cut(s) 693
Psp124BI GAGCTC 1 cut(s) 1068
PspPI GGNCC 2 cut(s) 145, 213
PspXI VCTCGAGB 1 cut(s) 581
PsuI RGATCY 1 cut(s) 16
RsaI GTAC 6 cut(s) 39, 198, 615, 923, 1000, 1182
RsaNI GTAC 6 cut(s) 38, 197, 614, 922, 999, 1181
RseI CAYNNNNRTG 4 cut(s) 321, 351, 411, 714
SacI GAGCTC 1 cut(s) 1068
SaqAI TTAA 2 cut(s) 135, 525
SatI GCNGC 1 cut(s) 516
Sau3AI GATC 7 cut(s) 16, 103, 249, 337, 343, 364, 1017
Sau96I GGNCC 2 cut(s) 145, 213
ScaI AGTACT 1 cut(s) 923
SchI GAGTC 1 cut(s) 593
ScrFI CCNGG 2 cut(s) 217, 1070
SduI GDGCHC 1 cut(s) 1068
SfaNI GCATC 2 cut(s) 244, 439
SfcI CTRYAG 1 cut(s) 12
Sfr274I CTCGAG 1 cut(s) 581
SlaI CTCGAG 1 cut(s) 581
SmiMI CAYNNNNRTG 4 cut(s) 321, 351, 411, 714
SmlI CTYRAG 5 cut(s) 126, 242, 524, 581, 636
SmoI CTYRAG 5 cut(s) 126, 242, 524, 581, 636
SnaBI TACGTA 2 cut(s) 200, 1184
Sse9I AATT 7 cut(s) 45, 60, 79, 699, 813, 851, 1032
SsiI CCGC 2 cut(s) 378, 588
SspI AATATT 1 cut(s) 1086
SspMI CTAG 4 cut(s) 548, 668, 819, 836
SstI GAGCTC 1 cut(s) 1068
StyD4I CCNGG 2 cut(s) 215, 1068
StyI CCWWGG 2 cut(s) 268, 642
TaaI ACNGT 2 cut(s) 353, 970
TaiI ACGT 2 cut(s) 202, 1186
TaqI TCGA 5 cut(s) 165, 252, 391, 483, 582
TasI AATT 7 cut(s) 45, 60, 79, 699, 813, 851, 1032
TatI WGTACW 2 cut(s) 613, 921
TfiI GAWTC 2 cut(s) 122, 1105
Tru1I TTAA 2 cut(s) 135, 525
Tru9I TTAA 2 cut(s) 135, 525
TscAI CASTG 1 cut(s) 315
TseFI GTSAC 1 cut(s) 689
TseI GCWGC 1 cut(s) 515
Tsp45I GTSAC 1 cut(s) 689
TspDTI ATGAA 6 cut(s) 100, 521, 726, 732, 756, 1110
TspRI CASTG 1 cut(s) 315
Vha464I CTTAAG 1 cut(s) 524
XapI RAATTY 1 cut(s) 79
XbaI TCTAGA 1 cut(s) 667
XceI RCATGY 1 cut(s) 697
XcmI CCANNNNNNNNNTGG 1 cut(s) 926
XhoI CTCGAG 1 cut(s) 581
XmnI GAANNNNTTC 3 cut(s) 63, 1085, 1109
XspI CTAG 4 cut(s) 548, 668, 819, 836
ZrmI AGTACT 1 cut(s) 923
Zsp2I ATGCAT 2 cut(s) 1058, 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.