Rmu_sc0002782.1_g000013

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002782.1
OG0000053
Physical Location & Seq
Reverse (-)
39404 .. 41864
2461 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002782.1_g000013.1.cds

Sequence Viewer

Length: 1293 bp
atgcctgtccaagctactccagcagcagctgaatcccatatcaataatgctaagccagaagttgttcggtgcacagcaaattttcaacctagcgtttggggagatcagtttgctaattatgcccatgacattataactcaagctcatatgcaacaacaagttgaggagctgaaactagtagtgaggaaggaagtattcactaatgctgctgctgatgatttttcacatcaactgaagctaattgatgcaatccagcgcctcggtgtggcttaccattttgaaactgaaatagaacaagccctggaacgtatacatgctacctatcaagatattcatgatgatggtggtgatctatacaatgttgctcttcgttttcgactcctcagacaacatggatatagtgtttcctgcgatgtattcaacaagttcaaagatgctaacggtgacttcaaggaaagcttagttactgatgtttcaggtatgctaagcttctatgaggcatcccatcaaatgatgcatggagaaaaattacttgaagaggctctcgattttaccaccactcatctcaagactgcaacaaatttaaccagtgcaagctcattactgaaggcacaaataactgaagccctagagagacctctactaaaaactatagagaggttaggtgctcggcgttacatgtcaatataccaagatgaagcttcacacaacgaggagttactgaaacttgcaaagttagattttaatgttatgaagaatcaagcccggctctactttgctgaggccagatggttccacgaaggatgcaccccaagaatggatgagtatttgcgtgttgcggcttcttctgtcggtaataccatgctttcagtcgtatctttagtaggcatgggagacattataacaaaagaggcatttgagtggttgaccaataatcctaaaatccttggagcttcgaatatcatatttaggcttatggatgacattgcagggcacaagtttgagaaagagagagggcatgttgcttctagtattgattgctacatgaaagaatatggggtctcagagcaagagacgattgatgtctttaacaaacgaattgtggattcgtggaaggatataaatgaagagttcatgagacccactgctgtgccaatggctgtgcttaatcgtgttcttaacctaactcgagtggttgatctcctttacaaaaggggtgatgccttcacgcatgttggaaaactgatgaaagattgtattgctgcactgtttattgatccagtgcccctctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

430

Amino Acids

48.8

Weight (kDa)

5.61

Isoelectric Point (pI)

35.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 134, 902
AccI GTMKAC 1 cut(s) 310
AciI CCGC 1 cut(s) 839
AclWI GGATC 1 cut(s) 1271
AcsI RAATTY 2 cut(s) 79, 580
AcuI CTGAAG 3 cut(s) 254, 626, 642
AfiI CCNNNNNNNGG 2 cut(s) 265, 817
AflIII ACRYGT 1 cut(s) 678
AgsI TTSAA 6 cut(s) 86, 281, 421, 430, 451, 536
AhlI ACTAGT 1 cut(s) 175
AjnI CCWGG 1 cut(s) 300
AleI CACNNNNGTG 1 cut(s) 1148
Alw21I GWGCWC 2 cut(s) 74, 670
Alw26I GTCTC 5 cut(s) 628, 888, 1066, 1067, 1132
Alw44I GTGCAC 1 cut(s) 70
AlwI GGATC 1 cut(s) 1271
AlwNI CAGNNNCTG 1 cut(s) 29
Ama87I CYCGRG 1 cut(s) 1188
AoxI GGCC 1 cut(s) 783
ApaLI GTGCAC 1 cut(s) 70
ApeKI GCWGC 5 cut(s) 23, 26, 206, 209, 1262
ApoI RAATTY 2 cut(s) 79, 580
Asp700I GAANNNNTTC 1 cut(s) 63
AspLEI GCGC 1 cut(s) 258
AsuC2I CCSGG 1 cut(s) 766
AsuHPI GGTGA 3 cut(s) 359, 455, 1229
AsuII TTCGAA 1 cut(s) 956
AvaI CYCGRG 1 cut(s) 1188
BaeGI GKGCMC 3 cut(s) 74, 996, 1287
Bbv12I GWGCWC 2 cut(s) 74, 670
BbvCI CCTCAGC 1 cut(s) 780
BbvI GCAGC 5 cut(s) 35, 38, 193, 196, 1249
BccI CCATC 3 cut(s) 335, 513, 783
BciT130I CCWGG 1 cut(s) 302
BcnI CCSGG 1 cut(s) 766
BcoDI GTCTC 5 cut(s) 628, 888, 1066, 1067, 1132
BcuI ACTAGT 1 cut(s) 175
BfaI CTAG 4 cut(s) 90, 176, 629, 1029
BfmI CTRYAG 1 cut(s) 651
BfoI RGCGCY 1 cut(s) 259
BisI GCNGC 6 cut(s) 24, 27, 207, 210, 840, 1263
BlpI GCTNAGC 2 cut(s) 51, 485
BlsI GCNGC 6 cut(s) 25, 28, 208, 211, 841, 1264
Bme1390I CCNGG 2 cut(s) 302, 766
BmeT110I CYCGRG 1 cut(s) 1188
BmiI GGNNCC 1 cut(s) 794
BmrFI CCNGG 2 cut(s) 302, 766
BmsI GCATC 6 cut(s) 235, 424, 504, 509, 794, 1210
Bpu10I CCTNAGC 1 cut(s) 780
Bpu1102I GCTNAGC 2 cut(s) 51, 485
Bpu14I TTCGAA 1 cut(s) 956
BpuEI CTTGAG 2 cut(s) 123, 551
BpuMI CCSGG 1 cut(s) 766
BsaI GGTCTC 3 cut(s) 628, 1066, 1132
BsaJI CCNNGG 3 cut(s) 259, 300, 946
Bsc4I CCNNNNNNNGG 2 cut(s) 265, 817
Bse1I ACTGG 2 cut(s) 588, 1280
Bse3DI GCAATG 1 cut(s) 984
BseBI CCWGG 1 cut(s) 302
BseDI CCNNGG 3 cut(s) 259, 300, 946
BseGI GGATG 4 cut(s) 500, 809, 826, 985
BseLI CCNNNNNNNGG 2 cut(s) 265, 817
BseMI GCAATG 1 cut(s) 984
BseMII CTCAG 3 cut(s) 397, 771, 1077
BseNI ACTGG 2 cut(s) 588, 1280
BseRI GAGGAG 3 cut(s) 179, 371, 728
BseSI GKGCMC 3 cut(s) 74, 996, 1287
BseXI GCAGC 5 cut(s) 35, 38, 193, 196, 1249
BsgI GTGCAG 1 cut(s) 1248
BshFI GGCC 1 cut(s) 785
BsiHKAI GWGCWC 2 cut(s) 74, 670
BsiHKCI CYCGRG 1 cut(s) 1188
BsiSI CCGG 1 cut(s) 766
BslI CCNNNNNNNGG 2 cut(s) 265, 817
BsmAI GTCTC 5 cut(s) 628, 888, 1066, 1067, 1132
BsmBI CGTCTC 1 cut(s) 1067
BsnI GGCC 1 cut(s) 785
Bso31I GGTCTC 3 cut(s) 628, 1066, 1132
BsoBI CYCGRG 1 cut(s) 1188
Bsp119I TTCGAA 1 cut(s) 956
Bsp1286I GDGCHC 4 cut(s) 74, 670, 996, 1287
Bsp143I GATC 4 cut(s) 103, 349, 1198, 1276
Bsp1720I GCTNAGC 2 cut(s) 51, 485
BspACI CCGC 1 cut(s) 839
BspANI GGCC 1 cut(s) 785
BspCNI CTCAG 3 cut(s) 396, 772, 1076
BspHI TCATGA 2 cut(s) 334, 1134
BspLI GGNNCC 1 cut(s) 794
BspPI GGATC 1 cut(s) 1271
BspQI GCTCTTC 1 cut(s) 372
BspT104I TTCGAA 1 cut(s) 956
BspTNI GGTCTC 3 cut(s) 628, 1066, 1132
BsrDI GCAATG 1 cut(s) 984
BsrI ACTGG 2 cut(s) 588, 1280
BssECI CCNNGG 3 cut(s) 259, 300, 946
BssMI GATC 4 cut(s) 103, 349, 1198, 1276
BssNAI GTATAC 1 cut(s) 311
BssT1I CCWWGG 1 cut(s) 946
Bst1107I GTATAC 1 cut(s) 311
Bst2UI CCWGG 1 cut(s) 302
Bst4CI ACNGT 2 cut(s) 443, 1269
Bst6I CTCTTC 3 cut(s) 372, 531, 1122
BstBI TTCGAA 1 cut(s) 956
BstC8I GCNNGC 1 cut(s) 595
BstDEI CTNAG 6 cut(s) 51, 383, 460, 485, 780, 1063
BstF5I GGATG 4 cut(s) 500, 809, 826, 985
BstH2I RGCGCY 1 cut(s) 259
BstHHI GCGC 1 cut(s) 258
BstKTI GATC 4 cut(s) 106, 352, 1201, 1279
BstMAI GTCTC 5 cut(s) 628, 888, 1066, 1067, 1132
BstMBI GATC 4 cut(s) 103, 349, 1198, 1276
BstMWI GCNNNNNNNGC 2 cut(s) 20, 119
BstNI CCWGG 1 cut(s) 302
BstNSI RCATGY 4 cut(s) 317, 682, 1022, 1235
BstSCI CCNGG 2 cut(s) 300, 764
BstSFI CTRYAG 1 cut(s) 651
BstSLI GKGCMC 3 cut(s) 74, 996, 1287
BstV1I GCAGC 5 cut(s) 35, 38, 193, 196, 1249
BstZ17I GTATAC 1 cut(s) 311
BsuRI GGCC 1 cut(s) 785
BtgZI GCGATG 1 cut(s) 426
BtsCI GGATG 4 cut(s) 500, 809, 826, 985
BtsI GCAGTG 1 cut(s) 1143
BtsIMutI CAGTG 4 cut(s) 595, 1143, 1265, 1287
Cac8I GCNNGC 1 cut(s) 595
CaiI CAGNNNCTG 1 cut(s) 29
CciI TCATGA 2 cut(s) 334, 1134
CfoI GCGC 1 cut(s) 258
DdeI CTNAG 6 cut(s) 51, 383, 460, 485, 780, 1063
DpnI GATC 4 cut(s) 105, 351, 1200, 1278
DpnII GATC 4 cut(s) 103, 349, 1198, 1276
Eam1104I CTCTTC 3 cut(s) 372, 531, 1122
EarI CTCTTC 3 cut(s) 372, 531, 1122
Eco130I CCWWGG 1 cut(s) 946
Eco31I GGTCTC 3 cut(s) 628, 1066, 1132
Eco57I CTGAAG 3 cut(s) 254, 626, 642
Eco88I CYCGRG 1 cut(s) 1188
EcoRII CCWGG 1 cut(s) 300
EcoT14I CCWWGG 1 cut(s) 946
EcoT22I ATGCAT 1 cut(s) 519
ErhI CCWWGG 1 cut(s) 946
Esp3I CGTCTC 1 cut(s) 1067
FalI AAGNNNNNCTT 2 cut(s) 443, 475
FauNDI CATATG 1 cut(s) 147
FblI GTMKAC 1 cut(s) 310
Fnu4HI GCNGC 6 cut(s) 24, 27, 207, 210, 840, 1263
FokI GGATG 4 cut(s) 487, 816, 833, 992
Fsp4HI GCNGC 6 cut(s) 24, 27, 207, 210, 840, 1263
FspBI CTAG 4 cut(s) 90, 176, 629, 1029
GlaI GCGC 1 cut(s) 257
GluI GCNGC 6 cut(s) 24, 27, 207, 210, 840, 1263
HaeII RGCGCY 1 cut(s) 259
HaeIII GGCC 1 cut(s) 785
HapII CCGG 1 cut(s) 766
HhaI GCGC 1 cut(s) 258
Hin6I GCGC 1 cut(s) 256
HinP1I GCGC 1 cut(s) 256
HincII GTYRAC 1 cut(s) 927
HindII GTYRAC 1 cut(s) 927
HindIII AAGCTT 3 cut(s) 457, 487, 699
HinfI GANTC 4 cut(s) 32, 378, 757, 1106
HpaII CCGG 1 cut(s) 766
HphI GGTGA 3 cut(s) 359, 455, 1229
Hpy166II GTNNAC 3 cut(s) 72, 311, 927
Hpy188I TCNGA 3 cut(s) 386, 1066, 1292
Hpy188III TCNNGA 5 cut(s) 326, 335, 545, 568, 1135
Hpy8I GTNNAC 3 cut(s) 72, 311, 927
HpyAV CCTTC 5 cut(s) 181, 601, 794, 1108, 1234
HpyCH4III ACNGT 2 cut(s) 443, 1269
HpyCH4IV ACGT 1 cut(s) 307
HpyF10VI GCNNNNNNNGC 2 cut(s) 20, 119
HpyF3I CTNAG 6 cut(s) 51, 383, 460, 485, 780, 1063
HpySE526I ACGT 1 cut(s) 307
HspAI GCGC 1 cut(s) 256
Kzo9I GATC 4 cut(s) 103, 349, 1198, 1276
LguI GCTCTTC 1 cut(s) 372
LmnI GCTCC 2 cut(s) 166, 950
Lsp1109I GCAGC 5 cut(s) 35, 38, 193, 196, 1249
LweI GCATC 6 cut(s) 235, 424, 504, 509, 794, 1210
MaeI CTAG 4 cut(s) 90, 176, 629, 1029
MaeII ACGT 1 cut(s) 307
MaeIII GTNAC 4 cut(s) 443, 463, 674, 717
MalI GATC 4 cut(s) 105, 351, 1200, 1278
MboI GATC 4 cut(s) 103, 349, 1198, 1276
MboII GAAGA 5 cut(s) 359, 548, 766, 837, 1139
MhlI GDGCHC 4 cut(s) 74, 670, 996, 1287
MluCI AATT 6 cut(s) 79, 115, 240, 527, 580, 1098
MlyI GAGTC 1 cut(s) 372
MmeI TCCRAC 1 cut(s) 1216
Mph1103I ATGCAT 1 cut(s) 519
MroXI GAANNNNTTC 1 cut(s) 63
MseI TTAA 5 cut(s) 584, 744, 1089, 1167, 1179
MslI CAYNNNNRTG 3 cut(s) 339, 919, 1148
MspA1I CMGCKG 1 cut(s) 29
MspI CCGG 1 cut(s) 766
MspR9I CCNGG 2 cut(s) 302, 766
MvaI CCWGG 1 cut(s) 302
MwoI GCNNNNNNNGC 2 cut(s) 20, 119
NciI CCSGG 1 cut(s) 766
NdeI CATATG 1 cut(s) 147
NdeII GATC 4 cut(s) 103, 349, 1198, 1276
NlaIV GGNNCC 1 cut(s) 794
NmeAIII GCCGAG 1 cut(s) 649
NmuCI GTSAC 1 cut(s) 443
NsiI ATGCAT 1 cut(s) 519
NspI RCATGY 4 cut(s) 317, 682, 1022, 1235
NspV TTCGAA 1 cut(s) 956
OliI CACNNNNGTG 1 cut(s) 1148
PaeR7I CTCGAG 1 cut(s) 1188
PagI TCATGA 2 cut(s) 334, 1134
PciI ACATGT 1 cut(s) 678
PciSI GCTCTTC 1 cut(s) 372
PdmI GAANNNNTTC 1 cut(s) 63
PfeI GAWTC 3 cut(s) 32, 757, 1106
PkrI GCNGC 6 cut(s) 25, 28, 208, 211, 841, 1264
PleI GAGTC 1 cut(s) 372
PpsI GAGTC 1 cut(s) 372
PscI ACATGT 1 cut(s) 678
PsiI TTATAA 2 cut(s) 134, 902
Psp6I CCWGG 1 cut(s) 300
PspGI CCWGG 1 cut(s) 300
PspN4I GGNNCC 1 cut(s) 794
PspXI VCTCGAGB 1 cut(s) 1188
PstNI CAGNNNCTG 1 cut(s) 29
PvuII CAGCTG 1 cut(s) 29
RseI CAYNNNNRTG 3 cut(s) 339, 919, 1148
SapI GCTCTTC 1 cut(s) 372
SaqAI TTAA 5 cut(s) 584, 744, 1089, 1167, 1179
SatI GCNGC 6 cut(s) 24, 27, 207, 210, 840, 1263
Sau3AI GATC 4 cut(s) 103, 349, 1198, 1276
SchI GAGTC 1 cut(s) 372
ScrFI CCNGG 2 cut(s) 302, 766
SduI GDGCHC 4 cut(s) 74, 670, 996, 1287
SfaNI GCATC 6 cut(s) 235, 424, 504, 509, 794, 1210
SfcI CTRYAG 1 cut(s) 651
Sfr274I CTCGAG 1 cut(s) 1188
SfuI TTCGAA 1 cut(s) 956
SlaI CTCGAG 1 cut(s) 1188
SmiMI CAYNNNNRTG 3 cut(s) 339, 919, 1148
SmlI CTYRAG 3 cut(s) 138, 566, 1188
SmoI CTYRAG 3 cut(s) 138, 566, 1188
SpeI ACTAGT 1 cut(s) 175
Sse9I AATT 6 cut(s) 79, 115, 240, 527, 580, 1098
SsiI CCGC 1 cut(s) 839
SspMI CTAG 4 cut(s) 90, 176, 629, 1029
StyD4I CCNGG 2 cut(s) 300, 764
StyI CCWWGG 1 cut(s) 946
TaaI ACNGT 2 cut(s) 443, 1269
TaiI ACGT 1 cut(s) 310
TaqI TCGA 4 cut(s) 376, 546, 956, 1189
TasI AATT 6 cut(s) 79, 115, 240, 527, 580, 1098
TauI GCSGC 1 cut(s) 842
TfiI GAWTC 3 cut(s) 32, 757, 1106
Tru1I TTAA 5 cut(s) 584, 744, 1089, 1167, 1179
Tru9I TTAA 5 cut(s) 584, 744, 1089, 1167, 1179
TscAI CASTG 4 cut(s) 595, 1150, 1272, 1287
TseFI GTSAC 1 cut(s) 443
TseI GCWGC 5 cut(s) 23, 26, 206, 209, 1262
Tsp45I GTSAC 1 cut(s) 443
TspDTI ATGAA 7 cut(s) 323, 711, 767, 1061, 1123, 1140, 1262
TspRI CASTG 4 cut(s) 595, 1150, 1272, 1287
VneI GTGCAC 1 cut(s) 70
XapI RAATTY 2 cut(s) 79, 580
XceI RCATGY 4 cut(s) 317, 682, 1022, 1235
XhoI CTCGAG 1 cut(s) 1188
XmiI GTMKAC 1 cut(s) 310
XmnI GAANNNNTTC 1 cut(s) 63
XspI CTAG 4 cut(s) 90, 176, 629, 1029
Zsp2I ATGCAT 1 cut(s) 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.