Prupe.4G197900_v2.0.a1

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Reverse (-)
12117419 .. 12120262
2844 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G197900.1

Sequence Viewer

Length: 1677 bp
ATGTCTATCCAAGTTTGTGCAGCAGCCCAATCTAAGCCTGAAATTATTCGTCGGACGGCAAATTTCCCACCAAGCATTTGGGGAGATCGGTTCATGAACTATGATTCCCAAGACATTATAACAAATGCCCGGAACCAAGAAGAAGTTGAGGAGCTGAAAGAAGTAGTGAGGAGGGAAGTATTCACAACTAGTGCAGGTGACTTTTCACATCAGCTCAAGTTGATTGATGCAATCCAGCGCCTTGGCGTGGCCTACCATTTTGAAAGTGAAATTGAAGAAGCGTTGGAGCGTATGCATGCTGCATTTCATGACCATGACTTTAGTGATGATGGAGATCTATACAACGTTGCTCTTGGTTTCCGGCTACTAAGACAACATGGATATAAGATTTCATGTGATGTGTTCAACAAGTTCAAAGACGAAAATGGCAGCTTCAAGGAATGCTTAATTGTCGATGTTCCGGGGATGCTAAGCCTTTATGAAGCCGGGCATCTAGGCATACGGGGAGAAGAAATACTAGATGAAGCTCTTGCTTTCACCACCACTCACCTTGACTCTGCCGCAAAAACTCATGTAAGCTACGAACATGCAGAACAAATCACTCAAGCCTTGGAGAGACCTTTGCGAAAAGATCTAGAGAGGGTATGTGCCAGGCGTTACATGTCAATCTACCAAGATGAAGCTTCACACAATGAAGCTTTGTTGAAACTTGCGAAGTTAGATTTTAATCTTGTTCAATCTTTGCACAAAAATGAGCTCAGTGAGATTACTAGGTGGTGGAAAGAAGTAGACTTTGAAAAGAAGCTGCCTTTCGCAAGAGACAGGATCGTGGAGTTGTACTTTTGGGTAGTCGGAGTATACTTTGAACCCCAATATGTCGAAGCACGAAAATTTCTTACAAAAGTGATTGCCCTGGTATCAGTGATGGATGATATCTACGACGCATATGCTACGTTTGAAGAACTTGAGATCTTTACTGCAGCAATTGAGAGGTGGGATATGAGTAGCATAGATGAACTACCAGACTATATGCAAATATTTTATCGTACCCTTTTGAATGTTGTCGATGAAATTGAGGAAGAGATTGCAAAGGATGGAAGATCATACCGAGTTTATTATGCAAAGGAATCTTTGAAAGCTGTAGCCCGAGCTTACTTTGAGGAGGCCAGATGGTTCAATGAAGGATACACCCCAACCATGGAGGAGTATCTACCTGCTGCAATAGTTTCTACTGGTTACCCCATGCTTTCAACTGTATCCTTACTTGGCATGGGAGATATTGTAACAAAGGAGATATTTGAGTGGTTGTTCAATGACGCAAAAATTGTTAGAGCTTCCACGACCCTTTTTAGGTTCATGGATGATATTGTCACAAGCAAGTTTGAGAAAGAGAGAGGCCATGTTGCCTGTAGTATTGATTGCTACATGAAGCAATATGGGGAGTCGGAGCAAGAGGCACTTGATGCTTTGAACAAGCGAGTGGTGGATCTGTGGAAGGACATAAACGAGGAGTTTCTCAGACCAACTGCAGCGCCAATGGCTGTCCTAATGAGAGTTCTTAATTTAACAAAAGTGGTAGATCTCCTTTACAAAGGTGACGATGGCTACACGCGTGTTGGTAAAGTGGTGAAGGATAAGATTGCTTCACATTTTATTAATCCAGTGCCAATTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

559

Amino Acids

64.58

Weight (kDa)

4.97

Isoelectric Point (pI)

44.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 119
AarI CACCTGC 1 cut(s) 185
Acc36I ACCTGC 2 cut(s) 185, 1222
AccI GTMKAC 2 cut(s) 789, 858
AccII CGCG 1 cut(s) 1612
AciI CCGC 1 cut(s) 561
AclI AACGTT 1 cut(s) 345
AclWI GGATC 2 cut(s) 833, 1494
AcsI RAATTY 2 cut(s) 61, 890
AfaI GTAC 2 cut(s) 839, 1048
AfiI CCNNNNNNNGG 3 cut(s) 247, 1198, 1350
AflIII ACRYGT 2 cut(s) 660, 1610
AhlI ACTAGT 1 cut(s) 188
AjnI CCWGG 2 cut(s) 650, 912
AloI GAACNNNNNNTCC 2 cut(s) 89, 121
Alw21I GWGCWC 1 cut(s) 759
Alw26I GTCTC 2 cut(s) 610, 813
AlwI GGATC 2 cut(s) 833, 1494
Ama87I CYCGRG 1 cut(s) 1146
AoxI GGCC 3 cut(s) 249, 1164, 1396
ApeKI GCWGC 8 cut(s) 20, 23, 299, 429, 805, 980, 1217, 1529
ApoI RAATTY 2 cut(s) 61, 890
AseI ATTAAT 1 cut(s) 1656
Asp700I GAANNNNTTC 1 cut(s) 45
AspLEI GCGC 2 cut(s) 240, 1534
AsuC2I CCSGG 3 cut(s) 130, 462, 487
AsuHPI GGTGA 5 cut(s) 209, 529, 539, 1607, 1639
AvaI CYCGRG 1 cut(s) 1146
BanII GRGCYC 1 cut(s) 759
Bbv12I GWGCWC 1 cut(s) 759
BbvI GCAGC 8 cut(s) 32, 35, 286, 441, 792, 992, 1204, 1541
BccI CCATC 5 cut(s) 323, 919, 1088, 1164, 1595
BceAI ACGGC 1 cut(s) 72
BcgI CGANNNNNNTGC 2 cut(s) 929, 963
BciT130I CCWGG 2 cut(s) 652, 914
BciVI GTATCC 2 cut(s) 1178, 1267
BcnI CCSGG 3 cut(s) 130, 462, 487
BcoDI GTCTC 2 cut(s) 610, 813
BcuI ACTAGT 1 cut(s) 188
BfaI CTAG 5 cut(s) 189, 494, 518, 635, 771
BfmI CTRYAG 4 cut(s) 978, 1140, 1408, 1527
BfoI RGCGCY 2 cut(s) 241, 1535
BfuAI ACCTGC 2 cut(s) 185, 1222
BfuI GTATCC 2 cut(s) 1178, 1267
BglII AGATCT 4 cut(s) 334, 631, 969, 1579
BisI GCNGC 9 cut(s) 21, 24, 300, 430, 561, 806, 981, 1218, 1530
BlpI GCTNAGC 1 cut(s) 470
BlsI GCNGC 9 cut(s) 22, 25, 301, 431, 562, 807, 982, 1219, 1531
Bme1390I CCNGG 5 cut(s) 130, 462, 487, 652, 914
BmeT110I CYCGRG 1 cut(s) 1146
BmiI GGNNCC 1 cut(s) 134
BmrFI CCNGG 5 cut(s) 130, 462, 487, 652, 914
BmsI GCATC 4 cut(s) 217, 456, 499, 1453
Bpu1102I GCTNAGC 1 cut(s) 470
BpuEI CTTGAG 3 cut(s) 200, 588, 986
BpuMI CCSGG 3 cut(s) 130, 462, 487
BsaBI GATNNNNATC 2 cut(s) 333, 726
BsaI GGTCTC 1 cut(s) 610
BsaJI CCNNGG 5 cut(s) 241, 461, 609, 912, 1197
BsaXI ACNNNNNCTCC 2 cut(s) 1266, 1296
Bsc4I CCNNNNNNNGG 3 cut(s) 247, 1198, 1350
Bse1I ACTGG 2 cut(s) 1237, 1661
Bse8I GATNNNNATC 2 cut(s) 333, 726
BseBI CCWGG 2 cut(s) 652, 914
BseDI CCNNGG 5 cut(s) 241, 461, 609, 912, 1197
BseGI GGATG 4 cut(s) 471, 934, 1099, 1366
BseJI GATNNNNATC 2 cut(s) 333, 726
BseLI CCNNNNNNNGG 3 cut(s) 247, 1198, 1350
BseMII CTCAG 2 cut(s) 772, 1531
BseNI ACTGG 2 cut(s) 1237, 1661
BseRI GAGGAG 5 cut(s) 164, 184, 1175, 1217, 1523
BseXI GCAGC 8 cut(s) 32, 35, 286, 441, 792, 992, 1204, 1541
BsgI GTGCAG 2 cut(s) 39, 213
Bsh1236I CGCG 1 cut(s) 1612
BshFI GGCC 3 cut(s) 251, 1166, 1398
BsiHKAI GWGCWC 1 cut(s) 759
BsiHKCI CYCGRG 1 cut(s) 1146
BsiSI CCGG 4 cut(s) 130, 361, 461, 486
BslI CCNNNNNNNGG 3 cut(s) 247, 1198, 1350
BsmAI GTCTC 2 cut(s) 610, 813
BsmI GAATGC 1 cut(s) 446
BsnI GGCC 3 cut(s) 251, 1166, 1398
Bso31I GGTCTC 1 cut(s) 610
BsoBI CYCGRG 1 cut(s) 1146
Bsp1286I GDGCHC 1 cut(s) 759
Bsp143I GATC 8 cut(s) 85, 334, 631, 825, 969, 1100, 1486, 1579
Bsp1720I GCTNAGC 1 cut(s) 470
Bsp19I CCATGG 1 cut(s) 1197
BspACI CCGC 1 cut(s) 561
BspANI GGCC 3 cut(s) 251, 1166, 1398
BspCNI CTCAG 2 cut(s) 771, 1530
BspFNI CGCG 1 cut(s) 1612
BspHI TCATGA 2 cut(s) 93, 307
BspLI GGNNCC 1 cut(s) 134
BspMAI CTGCAG 2 cut(s) 982, 1531
BspMI ACCTGC 2 cut(s) 185, 1222
BspPI GGATC 2 cut(s) 833, 1494
BspTNI GGTCTC 1 cut(s) 610
BsrI ACTGG 2 cut(s) 1237, 1661
BssECI CCNNGG 5 cut(s) 241, 461, 609, 912, 1197
BssMI GATC 8 cut(s) 85, 334, 631, 825, 969, 1100, 1486, 1579
BssNAI GTATAC 1 cut(s) 859
BssT1I CCWWGG 3 cut(s) 241, 609, 1197
Bst1107I GTATAC 1 cut(s) 859
Bst2UI CCWGG 2 cut(s) 652, 914
Bst4CI ACNGT 1 cut(s) 1255
Bst6I CTCTTC 1 cut(s) 1074
BstAPI GCANNNNNTGC 1 cut(s) 1463
BstC8I GCNNGC 1 cut(s) 297
BstDEI CTNAG 5 cut(s) 33, 368, 470, 758, 1517
BstDSI CCRYGG 1 cut(s) 1197
BstEII GGTNACC 1 cut(s) 1235
BstF5I GGATG 4 cut(s) 471, 934, 1099, 1366
BstFNI CGCG 1 cut(s) 1612
BstH2I RGCGCY 2 cut(s) 241, 1535
BstHHI GCGC 2 cut(s) 240, 1534
BstKTI GATC 8 cut(s) 88, 337, 634, 828, 972, 1103, 1489, 1582
BstMAI GTCTC 2 cut(s) 610, 813
BstMBI GATC 8 cut(s) 85, 334, 631, 825, 969, 1100, 1486, 1579
BstMWI GCNNNNNNNGC 2 cut(s) 1463, 1538
BstNI CCWGG 2 cut(s) 652, 914
BstNSI RCATGY 3 cut(s) 299, 590, 664
BstPI GGTNACC 1 cut(s) 1235
BstSCI CCNGG 5 cut(s) 128, 460, 485, 650, 912
BstSFI CTRYAG 4 cut(s) 978, 1140, 1408, 1527
BstUI CGCG 1 cut(s) 1612
BstV1I GCAGC 8 cut(s) 32, 35, 286, 441, 792, 992, 1204, 1541
BstX2I RGATCY 5 cut(s) 334, 631, 969, 1486, 1579
BstXI CCANNNNNNTGG 2 cut(s) 78, 242
BstYI RGATCY 5 cut(s) 334, 631, 969, 1486, 1579
BstZ17I GTATAC 1 cut(s) 859
BsuI GTATCC 2 cut(s) 1178, 1267
BsuRI GGCC 3 cut(s) 251, 1166, 1398
BtgI CCRYGG 1 cut(s) 1197
BtsCI GGATG 4 cut(s) 471, 934, 1099, 1366
BtsIMutI CAGTG 3 cut(s) 766, 927, 1668
BveI ACCTGC 2 cut(s) 185, 1222
Cac8I GCNNGC 1 cut(s) 297
CciI TCATGA 2 cut(s) 93, 307
CfoI GCGC 2 cut(s) 240, 1534
CseI GACGC 2 cut(s) 950, 1325
Csp6I GTAC 2 cut(s) 838, 1047
CspCI CAANNNNNGTGG 2 cut(s) 532, 567
CviQI GTAC 2 cut(s) 838, 1047
DdeI CTNAG 5 cut(s) 33, 368, 470, 758, 1517
DpnI GATC 8 cut(s) 87, 336, 633, 827, 971, 1102, 1488, 1581
DpnII GATC 8 cut(s) 85, 334, 631, 825, 969, 1100, 1486, 1579
Eam1104I CTCTTC 1 cut(s) 1074
EarI CTCTTC 1 cut(s) 1074
Ecl136II GAGCTC 1 cut(s) 757
Eco130I CCWWGG 3 cut(s) 241, 609, 1197
Eco24I GRGCYC 1 cut(s) 759
Eco31I GGTCTC 1 cut(s) 610
Eco32I GATATC 1 cut(s) 934
Eco53kI GAGCTC 1 cut(s) 757
Eco88I CYCGRG 1 cut(s) 1146
Eco91I GGTNACC 1 cut(s) 1235
EcoICRI GAGCTC 1 cut(s) 757
EcoO65I GGTNACC 1 cut(s) 1235
EcoRII CCWGG 2 cut(s) 650, 912
EcoRV GATATC 1 cut(s) 934
EcoT14I CCWWGG 3 cut(s) 241, 609, 1197
EcoT22I ATGCAT 1 cut(s) 297
EcoT38I GRGCYC 1 cut(s) 759
ErhI CCWWGG 3 cut(s) 241, 609, 1197
FalI AAGNNNNNCTT 4 cut(s) 428, 460, 1443, 1475
FauNDI CATATG 1 cut(s) 946
FblI GTMKAC 2 cut(s) 789, 858
Fnu4HI GCNGC 9 cut(s) 21, 24, 300, 430, 561, 806, 981, 1218, 1530
FokI GGATG 4 cut(s) 478, 941, 1106, 1373
FriOI GRGCYC 1 cut(s) 759
Fsp4HI GCNGC 9 cut(s) 21, 24, 300, 430, 561, 806, 981, 1218, 1530
FspBI CTAG 5 cut(s) 189, 494, 518, 635, 771
GlaI GCGC 2 cut(s) 239, 1533
GluI GCNGC 9 cut(s) 21, 24, 300, 430, 561, 806, 981, 1218, 1530
HaeII RGCGCY 2 cut(s) 241, 1535
HaeIII GGCC 3 cut(s) 251, 1166, 1398
HapII CCGG 4 cut(s) 130, 361, 461, 486
HgaI GACGC 2 cut(s) 950, 1325
HhaI GCGC 2 cut(s) 240, 1534
Hin6I GCGC 2 cut(s) 238, 1532
HinP1I GCGC 2 cut(s) 238, 1532
HindIII AAGCTT 2 cut(s) 681, 696
HinfI GANTC 4 cut(s) 104, 554, 1127, 1442
HpaII CCGG 4 cut(s) 130, 361, 461, 486
HphI GGTGA 5 cut(s) 209, 529, 539, 1607, 1639
Hpy166II GTNNAC 2 cut(s) 790, 859
Hpy188I TCNGA 4 cut(s) 54, 854, 1447, 1520
Hpy188III TCNNGA 3 cut(s) 94, 308, 635
Hpy8I GTNNAC 2 cut(s) 790, 859
Hpy99I CGWCG 2 cut(s) 54, 944
HpyAV CCTTC 3 cut(s) 1175, 1489, 1624
HpyCH4III ACNGT 1 cut(s) 1255
HpyCH4IV ACGT 2 cut(s) 345, 953
HpyF10VI GCNNNNNNNGC 2 cut(s) 1463, 1538
HpyF3I CTNAG 5 cut(s) 33, 368, 470, 758, 1517
HpySE526I ACGT 2 cut(s) 345, 953
HspAI GCGC 2 cut(s) 238, 1532
Kzo9I GATC 8 cut(s) 85, 334, 631, 825, 969, 1100, 1486, 1579
LmnI GCTCC 3 cut(s) 151, 286, 1447
Lsp1109I GCAGC 8 cut(s) 32, 35, 286, 441, 792, 992, 1204, 1541
LweI GCATC 4 cut(s) 217, 456, 499, 1453
MaeI CTAG 5 cut(s) 189, 494, 518, 635, 771
MaeII ACGT 2 cut(s) 345, 953
MaeIII GTNAC 6 cut(s) 197, 656, 1235, 1282, 1369, 1595
MalI GATC 8 cut(s) 87, 336, 633, 827, 971, 1102, 1488, 1581
MboI GATC 8 cut(s) 85, 334, 631, 825, 969, 1100, 1486, 1579
MboII GAAGA 6 cut(s) 152, 287, 521, 971, 1091, 1110
MfeI CAATTG 1 cut(s) 984
MflI RGATCY 5 cut(s) 334, 631, 969, 1486, 1579
MhlI GDGCHC 1 cut(s) 759
MluI ACGCGT 1 cut(s) 1610
MlyI GAGTC 2 cut(s) 548, 1451
MmeI TCCRAC 4 cut(s) 32, 264, 832, 1425
Mph1103I ATGCAT 1 cut(s) 297
MroXI GAANNNNTTC 1 cut(s) 45
MseI TTAA 5 cut(s) 446, 726, 1560, 1565, 1656
MslI CAYNNNNRTG 2 cut(s) 312, 750
MspI CCGG 4 cut(s) 130, 361, 461, 486
MspR9I CCNGG 5 cut(s) 130, 462, 487, 652, 914
MunI CAATTG 1 cut(s) 984
Mva1269I GAATGC 1 cut(s) 446
MvaI CCWGG 2 cut(s) 652, 914
MvnI CGCG 1 cut(s) 1612
MwoI GCNNNNNNNGC 2 cut(s) 1463, 1538
NciI CCSGG 3 cut(s) 130, 462, 487
NcoI CCATGG 1 cut(s) 1197
NdeI CATATG 1 cut(s) 946
NdeII GATC 8 cut(s) 85, 334, 631, 825, 969, 1100, 1486, 1579
NlaIV GGNNCC 1 cut(s) 134
NmuCI GTSAC 3 cut(s) 197, 1369, 1595
NsiI ATGCAT 1 cut(s) 297
NspI RCATGY 3 cut(s) 299, 590, 664
PaeI GCATGC 1 cut(s) 299
PagI TCATGA 2 cut(s) 93, 307
PaqCI CACCTGC 1 cut(s) 185
PciI ACATGT 1 cut(s) 660
PctI GAATGC 1 cut(s) 446
PdmI GAANNNNTTC 1 cut(s) 45
PfeI GAWTC 2 cut(s) 104, 1127
PkrI GCNGC 9 cut(s) 22, 25, 301, 431, 562, 807, 982, 1219, 1531
PleI GAGTC 2 cut(s) 548, 1450
PpsI GAGTC 2 cut(s) 548, 1450
PscI ACATGT 1 cut(s) 660
PshBI ATTAAT 1 cut(s) 1656
PsiI TTATAA 1 cut(s) 119
Psp124BI GAGCTC 1 cut(s) 759
Psp1406I AACGTT 1 cut(s) 345
Psp6I CCWGG 2 cut(s) 650, 912
PspEI GGTNACC 1 cut(s) 1235
PspGI CCWGG 2 cut(s) 650, 912
PspN4I GGNNCC 1 cut(s) 134
PstI CTGCAG 2 cut(s) 982, 1531
PsuI RGATCY 5 cut(s) 334, 631, 969, 1486, 1579
RsaI GTAC 2 cut(s) 839, 1048
RsaNI GTAC 2 cut(s) 838, 1047
RseI CAYNNNNRTG 2 cut(s) 312, 750
SacI GAGCTC 1 cut(s) 759
SaqAI TTAA 5 cut(s) 446, 726, 1560, 1565, 1656
SatI GCNGC 9 cut(s) 21, 24, 300, 430, 561, 806, 981, 1218, 1530
Sau3AI GATC 8 cut(s) 85, 334, 631, 825, 969, 1100, 1486, 1579
SchI GAGTC 2 cut(s) 548, 1451
ScrFI CCNGG 5 cut(s) 130, 462, 487, 652, 914
SduI GDGCHC 1 cut(s) 759
SfaNI GCATC 4 cut(s) 217, 456, 499, 1453
SfcI CTRYAG 4 cut(s) 978, 1140, 1408, 1527
SmiMI CAYNNNNRTG 2 cut(s) 312, 750
SmlI CTYRAG 3 cut(s) 215, 603, 965
SmoI CTYRAG 3 cut(s) 215, 603, 965
SpeI ACTAGT 1 cut(s) 188
SphI GCATGC 1 cut(s) 299
SsiI CCGC 1 cut(s) 561
SspI AATATT 1 cut(s) 1038
SspMI CTAG 5 cut(s) 189, 494, 518, 635, 771
SstI GAGCTC 1 cut(s) 759
StyD4I CCNGG 5 cut(s) 128, 460, 485, 650, 912
StyI CCWWGG 3 cut(s) 241, 609, 1197
TaaI ACNGT 1 cut(s) 1255
TaiI ACGT 2 cut(s) 348, 956
TaqI TCGA 3 cut(s) 453, 879, 1065
TatI WGTACW 1 cut(s) 837
TauI GCSGC 1 cut(s) 563
TfiI GAWTC 2 cut(s) 104, 1127
Tru1I TTAA 5 cut(s) 446, 726, 1560, 1565, 1656
Tru9I TTAA 5 cut(s) 446, 726, 1560, 1565, 1656
TscAI CASTG 3 cut(s) 766, 927, 1668
TseFI GTSAC 3 cut(s) 197, 1369, 1595
TseI GCWGC 8 cut(s) 20, 23, 299, 429, 805, 980, 1217, 1529
Tsp45I GTSAC 3 cut(s) 197, 1369, 1595
TspRI CASTG 3 cut(s) 766, 927, 1668
VspI ATTAAT 1 cut(s) 1656
XapI RAATTY 2 cut(s) 61, 890
XbaI TCTAGA 1 cut(s) 634
XceI RCATGY 3 cut(s) 299, 590, 664
XcmI CCANNNNNNNNNTGG 1 cut(s) 75
XmiI GTMKAC 2 cut(s) 789, 858
XmnI GAANNNNTTC 1 cut(s) 45
XspI CTAG 5 cut(s) 189, 494, 518, 635, 771
Zsp2I ATGCAT 1 cut(s) 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.