FvH4_5g06530

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000053
Physical Location & Seq
Forward (+)
3846830 .. 3850456
3627 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g06530.t1

Sequence Viewer

Length: 1320 bp
ATGGATCCTCTGTTGGTTTCAGCATCTCAATCTCAAACCCAAAATGGCAGTAGCACTGCAGATGTTGAACGACGTTCAGCTGATTTTTCTCCCAGCGTTTGGGGGGAATATTTTCTGGCATATGCATATGTGGAAACTGCTGATATTGAAGCCGACAAACGTGTCGAAGAAGTGAAGGAAGAAGTGAAGAGGGTGCTACTTAGTTCTCCGCCTTCACAGAGATTAGACTTGATTGATTACATTCAGCGCTTGGGGGTGTCACACCATTTTGAGGATGAGATTCACCAACTTTTGCAGCAAATTCACAACCAATACTCATCTTCTTCTTCAGATGATGATGACCTTCACACTGTTGCTCTACGTTTTCGGCTGCTTAGGCAAGAAGGATTTAAGGTTTCATGCGACATGTTCAACAAGTTCATCGATGTTGATGGGAATCTTAAGGAATCATGCGTCGCTGACGTACCAGGACTGCTAAGTTTGTATGAAACAGCACATCTAAGGAAACATGGAGAAGATTTCCTAGATCGAGCAGTGTCCTTCACTACCACTCATCTTGAGTCTGCAGTAGCAGCACCCGGCCGTTTAAGCCCCCCACTTTCAAATCAAGTAGCTCATGCCTTGTGGGATCTCTCTGCCATGGATCCACTGCCTAACTATATGAAAATTTTCTATGAGGCGATCTTGAATGCCTACACTGAAATTGAAGCCGATCTTGCCAAGGAGGGAAACTCGTATCGCATTGTCTATTTAATAGAAGCAATGCAATGTCAAGTTAGAATGTACTTGAAGGAAGCCAAATGGTACCACCTAAAGTGCACACCGAAAACCTATGATGAATACATGAGGGTGGCACTTATTACATCCGGCATGTTTTTGGTAGAAGCAGCATTCATTGTTCCATTAGCCGGTGAAATTTCGACAAGAGATTCCTTGGAATCGTTGTTCAGAGACCCTGACAATATAATTGTGAGGGCTTCAAACACACTTGGGAGACTCCTGAATGACATTCGAAGCCGCAAGTATGAGCAAAAGAGAGGAAATGATATCACAGCTATAGAATGCTACATGAAAGAATACTGTGTTACAGAAGAAGAAGCGTTCGTCGAACTAAATAAACAAGTGAATGATGCTTGGAAGGATGTAAACGAAGAATTGCTCCAGCCTCCCCCAACTGTCCCTAGGCCGATACTGTTGCTGTGTCTCAATCTTTTACGAGTAACTGATGTTATATACAAGTATGACGATGGTTATACTAATGGTGGAGTTGTGCTTAAGGATTATATAACTTCTCTGCTTGTCGAACCTGCTCCAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

440

Amino Acids

49.99

Weight (kDa)

4.84

Isoelectric Point (pI)

51.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 34 - 208 6.7e-55 Terpene synthase, N-terminal domain
Terpene_syn_C_2 PF19086 203 - 381 8.4e-33 Terpene synthase family 2, C-terminal metal binding
Terpene_synth_C PF03936 209 - 381 1.7e-48 Terpene synthase family, metal binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 161
Acc36I ACCTGC 1 cut(s) 1315
Acc65I GGTACC 1 cut(s) 804
AccB1I GGYRCC 1 cut(s) 804
AccB7I CCANNNNNTGG 1 cut(s) 99
AciI CCGC 2 cut(s) 209, 1018
AclWI GGATC 4 cut(s) 12, 636, 638, 651
AcoI YGGCCR 1 cut(s) 580
AcsI RAATTY 3 cut(s) 300, 666, 915
AcuI CTGAAG 1 cut(s) 312
AfaI GTAC 3 cut(s) 465, 785, 806
AfeI AGCGCT 1 cut(s) 248
AfiI CCNNNNNNNGG 3 cut(s) 99, 271, 908
AflII CTTAAG 2 cut(s) 440, 1274
AflIII ACRYGT 2 cut(s) 160, 405
AgsI TTSAA 8 cut(s) 68, 149, 412, 603, 688, 707, 790, 981
AjnI CCWGG 1 cut(s) 466
AloI GAACNNNNNNTCC 2 cut(s) 929, 961
AluBI AGCT 3 cut(s) 80, 614, 1055
AluI AGCT 3 cut(s) 80, 614, 1055
Alw21I GWGCWC 1 cut(s) 821
Alw26I GTCTC 3 cut(s) 945, 988, 1208
Alw44I GTGCAC 1 cut(s) 817
AlwI GGATC 4 cut(s) 12, 636, 638, 651
Aor51HI AGCGCT 1 cut(s) 248
AoxI GGCC 2 cut(s) 580, 1184
ApaLI GTGCAC 1 cut(s) 817
ApeKI GCWGC 4 cut(s) 295, 370, 572, 887
ApoI RAATTY 3 cut(s) 300, 666, 915
Asp700I GAANNNNTTC 2 cut(s) 111, 668
Asp718I GGTACC 1 cut(s) 804
AspA2I CCTAGG 1 cut(s) 1181
AspLEI GCGC 1 cut(s) 249
AsuC2I CCSGG 1 cut(s) 579
AsuHPI GGTGA 2 cut(s) 275, 923
AsuII TTCGAA 1 cut(s) 1012
AvrII CCTAGG 1 cut(s) 1181
BaeGI GKGCMC 1 cut(s) 821
BamHI GGATCC 2 cut(s) 4, 643
BanI GGYRCC 1 cut(s) 804
Bbv12I GWGCWC 1 cut(s) 821
BbvI GCAGC 4 cut(s) 307, 357, 584, 899
BccI CCATC 2 cut(s) 425, 1241
BceAI ACGGC 1 cut(s) 567
BcgI CGANNNNNNTGC 2 cut(s) 1177, 1211
BciT130I CCWGG 1 cut(s) 468
BcnI CCSGG 1 cut(s) 579
BcoDI GTCTC 3 cut(s) 945, 988, 1208
BfaI CTAG 2 cut(s) 524, 1182
BfmI CTRYAG 3 cut(s) 57, 564, 1056
BfoI RGCGCY 1 cut(s) 250
BfrI CTTAAG 2 cut(s) 440, 1274
BfuAI ACCTGC 1 cut(s) 1315
BisI GCNGC 5 cut(s) 296, 371, 573, 888, 1018
BlnI CCTAGG 1 cut(s) 1181
BlsI GCNGC 5 cut(s) 297, 372, 574, 889, 1019
Bme1390I CCNGG 2 cut(s) 468, 579
BmiI GGNNCC 3 cut(s) 6, 645, 806
BmrFI CCNGG 2 cut(s) 468, 579
BmsI GCATC 2 cut(s) 32, 1120
BplI GAGNNNNNCTC 2 cut(s) 716, 748
BpmI CTGGAG 1 cut(s) 1145
Bpu10I CCTNAGC 1 cut(s) 374
Bpu14I TTCGAA 1 cut(s) 1012
BpuEI CTTGAG 1 cut(s) 578
BpuMI CCSGG 1 cut(s) 579
Bsa29I ATCGAT 1 cut(s) 423
BsaBI GATNNNNATC 1 cut(s) 435
BsaI GGTCTC 1 cut(s) 945
BsaJI CCNNGG 4 cut(s) 639, 720, 933, 1181
Bsc4I CCNNNNNNNGG 3 cut(s) 99, 271, 908
Bse118I RCCGGY 1 cut(s) 908
Bse3DI GCAATG 2 cut(s) 768, 773
Bse8I GATNNNNATC 1 cut(s) 435
BseBI CCWGG 1 cut(s) 468
BseCI ATCGAT 1 cut(s) 423
BseDI CCNNGG 4 cut(s) 639, 720, 933, 1181
BseGI GGATG 3 cut(s) 280, 863, 1147
BseJI GATNNNNATC 1 cut(s) 435
BseLI CCNNNNNNNGG 3 cut(s) 99, 271, 908
BseMI GCAATG 2 cut(s) 768, 773
BseSI GKGCMC 1 cut(s) 821
BseX3I CGGCCG 1 cut(s) 580
BseXI GCAGC 4 cut(s) 307, 357, 584, 899
BseYI CCCAGC 1 cut(s) 92
Bsh1285I CGRYCG 1 cut(s) 583
BshFI GGCC 2 cut(s) 582, 1186
BshNI GGYRCC 1 cut(s) 804
BshVI ATCGAT 1 cut(s) 423
BsiEI CGRYCG 1 cut(s) 583
BsiHKAI GWGCWC 1 cut(s) 821
BsiSI CCGG 3 cut(s) 579, 867, 909
BslFI GGGAC 1 cut(s) 1163
BslI CCNNNNNNNGG 3 cut(s) 99, 271, 908
BsmAI GTCTC 3 cut(s) 945, 988, 1208
BsmFI GGGAC 1 cut(s) 1163
BsmI GAATGC 3 cut(s) 694, 890, 1067
BsnI GGCC 2 cut(s) 582, 1186
Bso31I GGTCTC 1 cut(s) 945
Bsp119I TTCGAA 1 cut(s) 1012
Bsp1286I GDGCHC 1 cut(s) 821
Bsp143I GATC 6 cut(s) 4, 526, 628, 643, 681, 712
Bsp19I CCATGG 1 cut(s) 639
BspACI CCGC 2 cut(s) 209, 1018
BspANI GGCC 2 cut(s) 582, 1186
BspDI ATCGAT 1 cut(s) 423
BspLI GGNNCC 3 cut(s) 6, 645, 806
BspMAI CTGCAG 2 cut(s) 61, 568
BspMI ACCTGC 1 cut(s) 1315
BspPI GGATC 4 cut(s) 12, 636, 638, 651
BspT104I TTCGAA 1 cut(s) 1012
BspT107I GGYRCC 1 cut(s) 804
BspTI CTTAAG 2 cut(s) 440, 1274
BspTNI GGTCTC 1 cut(s) 945
BsrDI GCAATG 2 cut(s) 768, 773
BsrFI RCCGGY 1 cut(s) 908
BssAI RCCGGY 1 cut(s) 908
BssECI CCNNGG 4 cut(s) 639, 720, 933, 1181
BssMI GATC 6 cut(s) 4, 526, 628, 643, 681, 712
BssT1I CCWWGG 4 cut(s) 639, 720, 933, 1181
Bst2UI CCWGG 1 cut(s) 468
Bst4CI ACNGT 4 cut(s) 352, 1082, 1177, 1194
Bst6I CTCTTC 1 cut(s) 182
BstAFI CTTAAG 2 cut(s) 440, 1274
BstBI TTCGAA 1 cut(s) 1012
BstDEI CTNAG 4 cut(s) 200, 374, 476, 500
BstDSI CCRYGG 1 cut(s) 639
BstF5I GGATG 3 cut(s) 280, 863, 1147
BstH2I RGCGCY 1 cut(s) 250
BstHHI GCGC 1 cut(s) 249
BstKTI GATC 6 cut(s) 7, 529, 631, 646, 684, 715
BstMAI GTCTC 3 cut(s) 945, 988, 1208
BstMBI GATC 6 cut(s) 4, 526, 628, 643, 681, 712
BstMCI CGRYCG 1 cut(s) 583
BstMWI GCNNNNNNNGC 4 cut(s) 376, 572, 588, 716
BstNI CCWGG 1 cut(s) 468
BstNSI RCATGY 2 cut(s) 409, 874
BstSCI CCNGG 2 cut(s) 466, 577
BstSFI CTRYAG 3 cut(s) 57, 564, 1056
BstSLI GKGCMC 1 cut(s) 821
BstV1I GCAGC 4 cut(s) 307, 357, 584, 899
BstX2I RGATCY 3 cut(s) 4, 628, 643
BstYI RGATCY 3 cut(s) 4, 628, 643
BstZI CGGCCG 1 cut(s) 580
Bsu15I ATCGAT 1 cut(s) 423
BsuRI GGCC 2 cut(s) 582, 1186
BsuTUI ATCGAT 1 cut(s) 423
BtgI CCRYGG 1 cut(s) 639
BtsCI GGATG 3 cut(s) 280, 863, 1147
BtsI GCAGTG 3 cut(s) 54, 540, 647
BtsIMutI CAGTG 5 cut(s) 54, 348, 540, 647, 696
BveI ACCTGC 1 cut(s) 1315
CfoI GCGC 1 cut(s) 249
Cfr10I RCCGGY 1 cut(s) 908
ClaI ATCGAT 1 cut(s) 423
CseI GACGC 1 cut(s) 442
Csp6I GTAC 3 cut(s) 464, 784, 805
CspCI CAANNNNNGTGG 2 cut(s) 538, 573
CviAII CATG 9 cut(s) 399, 406, 450, 509, 617, 640, 844, 871, 1069
CviQI GTAC 3 cut(s) 464, 784, 805
DdeI CTNAG 4 cut(s) 200, 374, 476, 500
DpnI GATC 6 cut(s) 6, 528, 630, 645, 683, 714
DpnII GATC 6 cut(s) 4, 526, 628, 643, 681, 712
DrdI GACNNNNNNGTC 1 cut(s) 161
DseDI GACNNNNNNGTC 1 cut(s) 161
EaeI YGGCCR 1 cut(s) 580
EagI CGGCCG 1 cut(s) 580
Eam1104I CTCTTC 1 cut(s) 182
EarI CTCTTC 1 cut(s) 182
EciI GGCGGA 1 cut(s) 198
EclXI CGGCCG 1 cut(s) 580
Eco130I CCWWGG 4 cut(s) 639, 720, 933, 1181
Eco31I GGTCTC 1 cut(s) 945
Eco32I GATATC 1 cut(s) 1048
Eco47III AGCGCT 1 cut(s) 248
Eco52I CGGCCG 1 cut(s) 580
Eco57I CTGAAG 1 cut(s) 312
EcoRII CCWGG 1 cut(s) 466
EcoRV GATATC 1 cut(s) 1048
EcoT14I CCWWGG 4 cut(s) 639, 720, 933, 1181
EcoT22I ATGCAT 1 cut(s) 127
ErhI CCWWGG 4 cut(s) 639, 720, 933, 1181
FaeI CATG 9 cut(s) 402, 409, 453, 512, 620, 643, 847, 874, 1072
FalI AAGNNNNNCTT 2 cut(s) 699, 731
FaqI GGGAC 1 cut(s) 1163
FatI CATG 9 cut(s) 398, 405, 449, 508, 616, 639, 843, 870, 1068
FauNDI CATATG 2 cut(s) 121, 127
Fnu4HI GCNGC 5 cut(s) 296, 371, 573, 888, 1018
FokI GGATG 3 cut(s) 287, 850, 1154
Fsp4HI GCNGC 5 cut(s) 296, 371, 573, 888, 1018
FspBI CTAG 2 cut(s) 524, 1182
GlaI GCGC 1 cut(s) 248
GluI GCNGC 5 cut(s) 296, 371, 573, 888, 1018
GsaI CCCAGC 1 cut(s) 96
GsuI CTGGAG 1 cut(s) 1145
HaeII RGCGCY 1 cut(s) 250
HaeIII GGCC 2 cut(s) 582, 1186
HapII CCGG 3 cut(s) 579, 867, 909
HgaI GACGC 1 cut(s) 442
HhaI GCGC 1 cut(s) 249
Hin1II CATG 9 cut(s) 402, 409, 453, 512, 620, 643, 847, 874, 1072
Hin6I GCGC 1 cut(s) 247
HinP1I GCGC 1 cut(s) 247
HinfI GANTC 7 cut(s) 280, 436, 446, 560, 929, 938, 996
HpaII CCGG 3 cut(s) 579, 867, 909
HphI GGTGA 2 cut(s) 275, 923
Hpy166II GTNNAC 2 cut(s) 819, 1147
Hpy188I TCNGA 2 cut(s) 331, 950
Hpy188III TCNNGA 3 cut(s) 557, 685, 1000
Hpy8I GTNNAC 2 cut(s) 819, 1147
Hpy99I CGWCG 3 cut(s) 75, 458, 1109
HpyAV CCTTC 7 cut(s) 169, 222, 353, 377, 550, 784, 1132
HpyCH4III ACNGT 4 cut(s) 352, 1082, 1177, 1194
HpyCH4IV ACGT 4 cut(s) 73, 160, 361, 462
HpyCH4V TGCA 6 cut(s) 59, 125, 295, 566, 766, 819
HpyF10VI GCNNNNNNNGC 4 cut(s) 376, 572, 588, 716
HpyF3I CTNAG 4 cut(s) 200, 374, 476, 500
HpySE526I ACGT 4 cut(s) 73, 160, 361, 462
Hsp92II CATG 9 cut(s) 402, 409, 453, 512, 620, 643, 847, 874, 1072
HspAI GCGC 1 cut(s) 247
KpnI GGTACC 1 cut(s) 808
Kzo9I GATC 6 cut(s) 4, 526, 628, 643, 681, 712
LmnI GCTCC 2 cut(s) 1164, 1315
Lsp1109I GCAGC 4 cut(s) 307, 357, 584, 899
LweI GCATC 2 cut(s) 32, 1120
MaeI CTAG 2 cut(s) 524, 1182
MaeII ACGT 4 cut(s) 73, 160, 361, 462
MaeIII GTNAC 3 cut(s) 258, 1084, 1219
MalI GATC 6 cut(s) 6, 528, 630, 645, 683, 714
MboI GATC 6 cut(s) 4, 526, 628, 643, 681, 712
MflI RGATCY 3 cut(s) 4, 628, 643
MhlI GDGCHC 1 cut(s) 821
MluCI AATT 6 cut(s) 300, 666, 702, 915, 966, 1154
MlyI GAGTC 2 cut(s) 569, 990
MnlI CCTC 9 cut(s) 18, 183, 265, 670, 718, 840, 966, 1031, 1176
Mph1103I ATGCAT 1 cut(s) 127
MroXI GAANNNNTTC 2 cut(s) 111, 668
MseI TTAA 5 cut(s) 390, 441, 587, 752, 1275
MslI CAYNNNNRTG 1 cut(s) 848
MspA1I CMGCKG 1 cut(s) 80
MspCI CTTAAG 2 cut(s) 440, 1274
MspI CCGG 3 cut(s) 579, 867, 909
MspR9I CCNGG 2 cut(s) 468, 579
Mva1269I GAATGC 3 cut(s) 694, 890, 1067
MvaI CCWGG 1 cut(s) 468
MwoI GCNNNNNNNGC 4 cut(s) 376, 572, 588, 716
NciI CCSGG 1 cut(s) 579
NcoI CCATGG 1 cut(s) 639
NdeI CATATG 2 cut(s) 121, 127
NdeII GATC 6 cut(s) 4, 526, 628, 643, 681, 712
NlaIII CATG 9 cut(s) 402, 409, 453, 512, 620, 643, 847, 874, 1072
NlaIV GGNNCC 3 cut(s) 6, 645, 806
NmuCI GTSAC 1 cut(s) 258
NsiI ATGCAT 1 cut(s) 127
NspI RCATGY 2 cut(s) 409, 874
NspV TTCGAA 1 cut(s) 1012
PciI ACATGT 1 cut(s) 405
PctI GAATGC 3 cut(s) 694, 890, 1067
PdmI GAANNNNTTC 2 cut(s) 111, 668
PfeI GAWTC 5 cut(s) 280, 436, 446, 929, 938
PflMI CCANNNNNTGG 1 cut(s) 99
PkrI GCNGC 5 cut(s) 297, 372, 574, 889, 1019
PleI GAGTC 2 cut(s) 568, 990
PpsI GAGTC 2 cut(s) 568, 990
PscI ACATGT 1 cut(s) 405
Psp6I CCWGG 1 cut(s) 466
PspFI CCCAGC 1 cut(s) 92
PspGI CCWGG 1 cut(s) 466
PspN4I GGNNCC 3 cut(s) 6, 645, 806
PstI CTGCAG 2 cut(s) 61, 568
PsuI RGATCY 3 cut(s) 4, 628, 643
PvuII CAGCTG 1 cut(s) 80
RsaI GTAC 3 cut(s) 465, 785, 806
RsaNI GTAC 3 cut(s) 464, 784, 805
RseI CAYNNNNRTG 1 cut(s) 848
SaqAI TTAA 5 cut(s) 390, 441, 587, 752, 1275
SatI GCNGC 5 cut(s) 296, 371, 573, 888, 1018
Sau3AI GATC 6 cut(s) 4, 526, 628, 643, 681, 712
SchI GAGTC 2 cut(s) 569, 990
ScrFI CCNGG 2 cut(s) 468, 579
SduI GDGCHC 1 cut(s) 821
SfaNI GCATC 2 cut(s) 32, 1120
SfcI CTRYAG 3 cut(s) 57, 564, 1056
SfuI TTCGAA 1 cut(s) 1012
SmiMI CAYNNNNRTG 1 cut(s) 848
SmlI CTYRAG 3 cut(s) 440, 557, 1274
SmoI CTYRAG 3 cut(s) 440, 557, 1274
Sse9I AATT 6 cut(s) 300, 666, 702, 915, 966, 1154
SsiI CCGC 2 cut(s) 209, 1018
SspI AATATT 1 cut(s) 110
SspMI CTAG 2 cut(s) 524, 1182
StyD4I CCNGG 2 cut(s) 466, 577
StyI CCWWGG 4 cut(s) 639, 720, 933, 1181
TaaI ACNGT 4 cut(s) 352, 1082, 1177, 1194
TaiI ACGT 4 cut(s) 76, 163, 364, 465
TaqI TCGA 7 cut(s) 165, 423, 529, 920, 1012, 1107, 1302
TasI AATT 6 cut(s) 300, 666, 702, 915, 966, 1154
TatI WGTACW 1 cut(s) 783
TauI GCSGC 1 cut(s) 1020
TfiI GAWTC 5 cut(s) 280, 436, 446, 929, 938
Tru1I TTAA 5 cut(s) 390, 441, 587, 752, 1275
Tru9I TTAA 5 cut(s) 390, 441, 587, 752, 1275
TscAI CASTG 5 cut(s) 61, 355, 540, 654, 703
TseFI GTSAC 1 cut(s) 258
TseI GCWGC 4 cut(s) 295, 370, 572, 887
Tsp45I GTSAC 1 cut(s) 258
TspDTI ATGAA 7 cut(s) 387, 409, 501, 677, 852, 883, 1085
TspRI CASTG 5 cut(s) 61, 355, 540, 654, 703
Van91I CCANNNNNTGG 1 cut(s) 99
Vha464I CTTAAG 2 cut(s) 440, 1274
VneI GTGCAC 1 cut(s) 817
XapI RAATTY 3 cut(s) 300, 666, 915
XceI RCATGY 2 cut(s) 409, 874
XmaJI CCTAGG 1 cut(s) 1181
XmnI GAANNNNTTC 2 cut(s) 111, 668
XspI CTAG 2 cut(s) 524, 1182
Zsp2I ATGCAT 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.