synthase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Terpene_synth | PF01397 | 30 - 202 | 1.5e-61 | Terpene synthase, N-terminal domain |
| Terpene_synth_C | PF03936 | 259 - 330 | 3e-24 | Terpene synthase family, metal binding domain |
| Terpene_syn_C_2 | PF19086 | 300 - 331 | 6.7e-06 | Terpene synthase family 2, C-terminal metal binding |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 378 |
| Acc36I | ACCTGC | 1 cut(s) | 732 |
| AciI | CCGC | 1 cut(s) | 619 |
| AclI | AACGTT | 1 cut(s) | 381 |
| AclWI | GGATC | 2 cut(s) | 185, 198 |
| AcsI | RAATTY | 3 cut(s) | 282, 294, 428 |
| AcuI | CTGAAG | 1 cut(s) | 996 |
| AfaI | GTAC | 1 cut(s) | 857 |
| AfeI | AGCGCT | 1 cut(s) | 242 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 492, 637, 745, 882 |
| AflIII | ACRYGT | 1 cut(s) | 148 |
| AgsI | TTSAA | 6 cut(s) | 266, 289, 400, 409, 585, 721 |
| AjiI | CACGTC | 1 cut(s) | 787 |
| AjnI | CCWGG | 1 cut(s) | 881 |
| AluBI | AGCT | 6 cut(s) | 29, 306, 471, 799, 967, 980 |
| AluI | AGCT | 6 cut(s) | 29, 306, 471, 799, 967, 980 |
| Alw21I | GWGCWC | 1 cut(s) | 969 |
| Alw26I | GTCTC | 2 cut(s) | 9, 807 |
| AlwI | GGATC | 2 cut(s) | 185, 198 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 616 |
| Aor51HI | AGCGCT | 1 cut(s) | 242 |
| AoxI | GGCC | 2 cut(s) | 35, 522 |
| ApeKI | GCWGC | 2 cut(s) | 727, 799 |
| ApoI | RAATTY | 3 cut(s) | 282, 294, 428 |
| AseI | ATTAAT | 1 cut(s) | 1010 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 981 |
| AspA2I | CCTAGG | 1 cut(s) | 632 |
| AspLEI | GCGC | 1 cut(s) | 243 |
| AspS9I | GGNCC | 1 cut(s) | 523 |
| AsuHPI | GGTGA | 4 cut(s) | 107, 184, 290, 526 |
| AsuII | TTCGAA | 1 cut(s) | 861 |
| AvrII | CCTAGG | 1 cut(s) | 632 |
| BamHI | GGATCC | 1 cut(s) | 190 |
| BanII | GRGCYC | 1 cut(s) | 969 |
| BbsI | GAAGAC | 1 cut(s) | 513 |
| Bbv12I | GWGCWC | 1 cut(s) | 969 |
| BbvI | GCAGC | 2 cut(s) | 714, 786 |
| BccI | CCATC | 2 cut(s) | 495, 747 |
| BceAI | ACGGC | 1 cut(s) | 787 |
| BciT130I | CCWGG | 1 cut(s) | 883 |
| BciVI | GTATCC | 1 cut(s) | 489 |
| BclI | TGATCA | 2 cut(s) | 97, 421 |
| BcoDI | GTCTC | 2 cut(s) | 9, 807 |
| BfaI | CTAG | 4 cut(s) | 527, 633, 765, 962 |
| BfmI | CTRYAG | 1 cut(s) | 728 |
| BfoI | RGCGCY | 1 cut(s) | 244 |
| BfuAI | ACCTGC | 1 cut(s) | 732 |
| BfuI | GTATCC | 1 cut(s) | 489 |
| BisI | GCNGC | 2 cut(s) | 728, 800 |
| BlnI | CCTAGG | 1 cut(s) | 632 |
| BlsI | GCNGC | 2 cut(s) | 729, 801 |
| Bme1390I | CCNGG | 1 cut(s) | 883 |
| BmgBI | CACGTC | 1 cut(s) | 787 |
| BmgT120I | GGNCC | 1 cut(s) | 523 |
| BmiI | GGNNCC | 1 cut(s) | 192 |
| BmrFI | CCNGG | 1 cut(s) | 883 |
| BmsI | GCATC | 3 cut(s) | 29, 446, 636 |
| BpiI | GAAGAC | 1 cut(s) | 513 |
| BpmI | CTGGAG | 1 cut(s) | 862 |
| Bpu10I | CCTNAGC | 1 cut(s) | 244 |
| Bpu14I | TTCGAA | 1 cut(s) | 861 |
| BpuEI | CTTGAG | 3 cut(s) | 9, 161, 569 |
| BsaJI | CCNNGG | 2 cut(s) | 120, 632 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 492, 637, 745, 882 |
| BseBI | CCWGG | 1 cut(s) | 883 |
| BseDI | CCNNGG | 2 cut(s) | 120, 632 |
| BseGI | GGATG | 2 cut(s) | 186, 627 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 492, 637, 745, 882 |
| BseXI | GCAGC | 2 cut(s) | 714, 786 |
| BshFI | GGCC | 2 cut(s) | 37, 524 |
| BsiHKAI | GWGCWC | 1 cut(s) | 969 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 492, 637, 745, 882 |
| BsmAI | GTCTC | 2 cut(s) | 9, 807 |
| BsmI | GAATGC | 2 cut(s) | 530, 677 |
| BsnI | GGCC | 2 cut(s) | 37, 524 |
| Bsp119I | TTCGAA | 1 cut(s) | 861 |
| Bsp1286I | GDGCHC | 1 cut(s) | 969 |
| Bsp143I | GATC | 3 cut(s) | 97, 190, 421 |
| BspACI | CCGC | 1 cut(s) | 619 |
| BspANI | GGCC | 2 cut(s) | 37, 524 |
| BspLI | GGNNCC | 1 cut(s) | 192 |
| BspMAI | CTGCAG | 1 cut(s) | 732 |
| BspMI | ACCTGC | 1 cut(s) | 732 |
| BspPI | GGATC | 2 cut(s) | 185, 198 |
| BspT104I | TTCGAA | 1 cut(s) | 861 |
| BssECI | CCNNGG | 2 cut(s) | 120, 632 |
| BssMI | GATC | 3 cut(s) | 97, 190, 421 |
| BssT1I | CCWWGG | 2 cut(s) | 120, 632 |
| Bst2UI | CCWGG | 1 cut(s) | 883 |
| Bst4CI | ACNGT | 2 cut(s) | 465, 944 |
| Bst6I | CTCTTC | 4 cut(s) | 162, 170, 447, 513 |
| BstBI | TTCGAA | 1 cut(s) | 861 |
| BstDEI | CTNAG | 4 cut(s) | 244, 362, 446, 491 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 880 |
| BstF5I | GGATG | 2 cut(s) | 186, 627 |
| BstH2I | RGCGCY | 1 cut(s) | 244 |
| BstHHI | GCGC | 1 cut(s) | 243 |
| BstKTI | GATC | 3 cut(s) | 100, 193, 424 |
| BstMAI | GTCTC | 2 cut(s) | 9, 807 |
| BstMBI | GATC | 3 cut(s) | 97, 190, 421 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 26 |
| BstNI | CCWGG | 1 cut(s) | 883 |
| BstSCI | CCNGG | 1 cut(s) | 881 |
| BstSFI | CTRYAG | 1 cut(s) | 728 |
| BstV1I | GCAGC | 2 cut(s) | 714, 786 |
| BstV2I | GAAGAC | 1 cut(s) | 513 |
| BstX2I | RGATCY | 1 cut(s) | 190 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 90, 127 |
| BstYI | RGATCY | 1 cut(s) | 190 |
| BsuI | GTATCC | 1 cut(s) | 489 |
| BsuRI | GGCC | 2 cut(s) | 37, 524 |
| BtrI | CACGTC | 1 cut(s) | 787 |
| BtsCI | GGATG | 2 cut(s) | 186, 627 |
| BtsI | GCAGTG | 2 cut(s) | 614, 903 |
| BtsIMutI | CAGTG | 2 cut(s) | 614, 903 |
| BveI | ACCTGC | 1 cut(s) | 732 |
| CaiI | CAGNNNCTG | 1 cut(s) | 616 |
| CfoI | GCGC | 1 cut(s) | 243 |
| Cfr13I | GGNCC | 1 cut(s) | 523 |
| Csp6I | GTAC | 1 cut(s) | 856 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 529, 564 |
| CviAII | CATG | 3 cut(s) | 53, 387, 894 |
| CviQI | GTAC | 1 cut(s) | 856 |
| DdeI | CTNAG | 4 cut(s) | 244, 362, 446, 491 |
| DpnI | GATC | 3 cut(s) | 99, 192, 423 |
| DpnII | GATC | 3 cut(s) | 97, 190, 421 |
| DraI | TTTAAA | 1 cut(s) | 1005 |
| Eam1104I | CTCTTC | 4 cut(s) | 162, 170, 447, 513 |
| EarI | CTCTTC | 4 cut(s) | 162, 170, 447, 513 |
| Ecl136II | GAGCTC | 1 cut(s) | 967 |
| Eco130I | CCWWGG | 2 cut(s) | 120, 632 |
| Eco24I | GRGCYC | 1 cut(s) | 969 |
| Eco47III | AGCGCT | 1 cut(s) | 242 |
| Eco53kI | GAGCTC | 1 cut(s) | 967 |
| Eco57I | CTGAAG | 1 cut(s) | 996 |
| EcoICRI | GAGCTC | 1 cut(s) | 967 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 880 |
| EcoO109I | RGGNCCY | 1 cut(s) | 523 |
| EcoRII | CCWGG | 1 cut(s) | 881 |
| EcoT14I | CCWWGG | 2 cut(s) | 120, 632 |
| EcoT38I | GRGCYC | 1 cut(s) | 969 |
| ErhI | CCWWGG | 2 cut(s) | 120, 632 |
| FaeI | CATG | 3 cut(s) | 56, 390, 897 |
| FatI | CATG | 3 cut(s) | 52, 386, 893 |
| FbaI | TGATCA | 2 cut(s) | 97, 421 |
| Fnu4HI | GCNGC | 2 cut(s) | 728, 800 |
| FokI | GGATG | 2 cut(s) | 193, 614 |
| FriOI | GRGCYC | 1 cut(s) | 969 |
| Fsp4HI | GCNGC | 2 cut(s) | 728, 800 |
| FspBI | CTAG | 4 cut(s) | 527, 633, 765, 962 |
| GlaI | GCGC | 1 cut(s) | 242 |
| GluI | GCNGC | 2 cut(s) | 728, 800 |
| GsuI | CTGGAG | 1 cut(s) | 862 |
| HaeII | RGCGCY | 1 cut(s) | 244 |
| HaeIII | GGCC | 2 cut(s) | 37, 524 |
| HhaI | GCGC | 1 cut(s) | 243 |
| Hin1II | CATG | 3 cut(s) | 56, 390, 897 |
| Hin6I | GCGC | 1 cut(s) | 241 |
| HinP1I | GCGC | 1 cut(s) | 241 |
| HindIII | AAGCTT | 1 cut(s) | 469 |
| HinfI | GANTC | 2 cut(s) | 551, 677 |
| HphI | GGTGA | 4 cut(s) | 107, 184, 290, 526 |
| Hpy166II | GTNNAC | 2 cut(s) | 130, 807 |
| Hpy188I | TCNGA | 3 cut(s) | 426, 744, 987 |
| Hpy188III | TCNNGA | 5 cut(s) | 155, 459, 548, 697, 841 |
| Hpy8I | GTNNAC | 2 cut(s) | 130, 807 |
| HpyAV | CCTTC | 5 cut(s) | 216, 585, 616, 739, 769 |
| HpyCH4III | ACNGT | 2 cut(s) | 465, 944 |
| HpyCH4IV | ACGT | 3 cut(s) | 150, 381, 786 |
| HpyCH4V | TGCA | 3 cut(s) | 707, 730, 897 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 26 |
| HpyF3I | CTNAG | 4 cut(s) | 244, 362, 446, 491 |
| HpySE526I | ACGT | 3 cut(s) | 150, 381, 786 |
| Hsp92II | CATG | 3 cut(s) | 56, 390, 897 |
| HspAI | GCGC | 1 cut(s) | 241 |
| Ksp22I | TGATCA | 2 cut(s) | 97, 421 |
| Kzo9I | GATC | 3 cut(s) | 97, 190, 421 |
| LpnPI | CCDG | 8 cut(s) | 51, 207, 444, 710, 737, 826, 868, 895 |
| Lsp1109I | GCAGC | 2 cut(s) | 714, 786 |
| LweI | GCATC | 3 cut(s) | 29, 446, 636 |
| MaeI | CTAG | 4 cut(s) | 527, 633, 765, 962 |
| MaeII | ACGT | 3 cut(s) | 150, 381, 786 |
| MaeIII | GTNAC | 2 cut(s) | 901, 1015 |
| MalI | GATC | 3 cut(s) | 99, 192, 423 |
| MboI | GATC | 3 cut(s) | 97, 190, 421 |
| MboII | GAAGA | 7 cut(s) | 179, 187, 425, 434, 518, 530, 968 |
| MflI | RGATCY | 1 cut(s) | 190 |
| MhlI | GDGCHC | 1 cut(s) | 969 |
| MlyI | GAGTC | 1 cut(s) | 560 |
| MmeI | TCCRAC | 1 cut(s) | 693 |
| MnlI | CCTC | 6 cut(s) | 163, 171, 514, 876, 879, 981 |
| MroXI | GAANNNNTTC | 1 cut(s) | 981 |
| MspR9I | CCNGG | 1 cut(s) | 883 |
| Mva1269I | GAATGC | 2 cut(s) | 530, 677 |
| MvaI | CCWGG | 1 cut(s) | 883 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 26 |
| NdeII | GATC | 3 cut(s) | 97, 190, 421 |
| NlaIII | CATG | 3 cut(s) | 56, 390, 897 |
| NlaIV | GGNNCC | 1 cut(s) | 192 |
| NmuCI | GTSAC | 2 cut(s) | 901, 1015 |
| NspV | TTCGAA | 1 cut(s) | 861 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 387 |
| PctI | GAATGC | 2 cut(s) | 530, 677 |
| PdmI | GAANNNNTTC | 1 cut(s) | 981 |
| PfeI | GAWTC | 1 cut(s) | 677 |
| PkrI | GCNGC | 2 cut(s) | 729, 801 |
| PleI | GAGTC | 1 cut(s) | 559 |
| PpsI | GAGTC | 1 cut(s) | 559 |
| PshBI | ATTAAT | 1 cut(s) | 1010 |
| PsiI | TTATAA | 1 cut(s) | 378 |
| Psp124BI | GAGCTC | 1 cut(s) | 969 |
| Psp1406I | AACGTT | 1 cut(s) | 381 |
| Psp6I | CCWGG | 1 cut(s) | 881 |
| PspGI | CCWGG | 1 cut(s) | 881 |
| PspN4I | GGNNCC | 1 cut(s) | 192 |
| PspPI | GGNCC | 1 cut(s) | 523 |
| PstI | CTGCAG | 1 cut(s) | 732 |
| PstNI | CAGNNNCTG | 1 cut(s) | 616 |
| PsuI | RGATCY | 1 cut(s) | 190 |
| RsaI | GTAC | 1 cut(s) | 857 |
| RsaNI | GTAC | 1 cut(s) | 856 |
| SacI | GAGCTC | 1 cut(s) | 969 |
| SatI | GCNGC | 2 cut(s) | 728, 800 |
| Sau3AI | GATC | 3 cut(s) | 97, 190, 421 |
| Sau96I | GGNCC | 1 cut(s) | 523 |
| SchI | GAGTC | 1 cut(s) | 560 |
| ScrFI | CCNGG | 1 cut(s) | 883 |
| SduI | GDGCHC | 1 cut(s) | 969 |
| SfaNI | GCATC | 3 cut(s) | 29, 446, 636 |
| SfcI | CTRYAG | 1 cut(s) | 728 |
| SfuI | TTCGAA | 1 cut(s) | 861 |
| SmlI | CTYRAG | 3 cut(s) | 24, 140, 548 |
| SmoI | CTYRAG | 3 cut(s) | 24, 140, 548 |
| SsiI | CCGC | 1 cut(s) | 619 |
| SspI | AATATT | 1 cut(s) | 872 |
| SspMI | CTAG | 4 cut(s) | 527, 633, 765, 962 |
| SstI | GAGCTC | 1 cut(s) | 969 |
| StyD4I | CCNGG | 1 cut(s) | 881 |
| StyI | CCWWGG | 2 cut(s) | 120, 632 |
| TaaI | ACNGT | 2 cut(s) | 465, 944 |
| TaiI | ACGT | 3 cut(s) | 153, 384, 789 |
| TaqI | TCGA | 6 cut(s) | 154, 355, 516, 861, 924, 954 |
| TaqII | GACCGA | 1 cut(s) | 544 |
| TfiI | GAWTC | 1 cut(s) | 677 |
| TscAI | CASTG | 2 cut(s) | 621, 910 |
| TseFI | GTSAC | 2 cut(s) | 901, 1015 |
| TseI | GCWGC | 2 cut(s) | 727, 799 |
| Tsp45I | GTSAC | 2 cut(s) | 901, 1015 |
| TspDTI | ATGAA | 3 cut(s) | 294, 375, 492 |
| TspGWI | ACGGA | 2 cut(s) | 338, 516 |
| TspRI | CASTG | 2 cut(s) | 621, 910 |
| VspI | ATTAAT | 1 cut(s) | 1010 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 880 |
| XapI | RAATTY | 3 cut(s) | 282, 294, 428 |
| XmaJI | CCTAGG | 1 cut(s) | 632 |
| XmnI | GAANNNNTTC | 1 cut(s) | 981 |
| XspI | CTAG | 4 cut(s) | 527, 633, 765, 962 |