Prupe.4G198700_v2.0.a1

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Forward (+)
12194458 .. 12196530
2073 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G198700.1

Sequence Viewer

Length: 1311 bp
ATGGCTCTAGAAGCCAGTTCAACAGCACAATCACAAAATTCTAAGGCTGATCAAATTGTTCGACGGACAGCTAATTACCACCCGAGCATTTGGGGGGATCAATTTATGCATTATGATTCAGAAGACATGATAACTTATGCCCATAAGCAACAAGAAGTTGAAGAACTGAAACTAGTAGTGAGGAGGGAAGTGTTCAAAACCAGTGCAGATGATTTTTCAACTCAGATGAAGCTAATCGATGCAATCCAGCACCTAGGCGTGGCGTACCACTTTGAAAAGGAAATAGAAGAAGCACTGGAACATTTATATGCTACAAATCATTTCCATGATGATGATGATGGTGATGGTGATCTATACAATGTTTCTCTTGGTTTTCGGCTACTAAGACAACATGGACACAATGTTTCATGCAGAATATTCAACAAGTTCAAAGATACTAAAAATGGAGGCTTCAAGGAAAGCTTAATTGCTGATGTGCTGGGCATGCTAAGCTTTTATGAAGCAACTCATCTGAGGGTGCATGGAGAAGATATACTAGAAGAAGCTCTTGTTTTCACCACCAAACATCTCGAGTCGGCAACAACCCATGTAAGCTATCAACTGGCAGAACAAATACTTCAAGCCTTGGAGAGACCGCTGCGAAAGGGTCTGGAGAGGTTATGTGCCCGTCGGTACATGTCAACTTACCAGGATGAAGCTTCACATAATGAAGCTCTATTAAAACTCGCCAAGTCAGACTTCAATCTTGTTCAATCTTTGCACAAACAAGAGCTCAGTGAGATTATTAGGTGGTGGAAAGAACTGGAGTTTGAAAAGAAGCTGCCTTTTGCAAGAGACCGAATTGTGGAGTTGTACTTCTGGGTAGTGGGAGTCTATTTTGAGCACCAATACCTTGTTGGGAGAAAAATTCTCACAAAAGTGATGGCCTTATTATCAATAATGGATGATATCTACGACGCATTCGGTACATTTGAAGAACTCGAGATCTTTACCGAAGCAATTCAAAGATGGCATGTCAATTGCATGGATGGACTGCCAGCTGACTACATGCAAATATTCTACCACGCGGTTTTGAATGTTTTCAATGAAATTGAGGAGGAGATGATGAAGGAAGGGAGAGCATACCGAGCAAACTATGCAAAAGAAGCTTGGAAAACTTCAGCTAAAGCTTACTTTGATGAGGCCAAATGGTTCCACGAAGGATGCATCCCAAACATGGAGGAGTATATGCGTGTTGCTACAGCATCTGTTGGTAACACCATATATACTTTCAACTATATCTTTACTTTGCATGGGAGACATTGTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

437

Amino Acids

51.06

Weight (kDa)

5.49

Isoelectric Point (pI)

48.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1067
AciI CCGC 2 cut(s) 635, 1067
AclWI GGATC 1 cut(s) 105
AcsI RAATTY 2 cut(s) 37, 906
AcuI CTGAAG 1 cut(s) 1143
AfaI GTAC 4 cut(s) 266, 674, 854, 967
AfiI CCNNNNNNNGG 3 cut(s) 259, 844, 1216
AflIII ACRYGT 1 cut(s) 675
AhlI ACTAGT 1 cut(s) 172
AjnI CCWGG 1 cut(s) 687
AjuI GAANNNNNNNTTGG 2 cut(s) 722, 754
AleI CACNNNNGTG 1 cut(s) 917
Alw21I GWGCWC 2 cut(s) 774, 885
Alw26I GTCTC 3 cut(s) 625, 828, 1291
AlwI GGATC 1 cut(s) 105
AlwNI CAGNNNCTG 1 cut(s) 1247
Ama87I CYCGRG 3 cut(s) 82, 569, 980
AoxI GGCC 2 cut(s) 924, 1182
ApeKI GCWGC 2 cut(s) 637, 820
ApoI RAATTY 2 cut(s) 37, 906
Asp700I GAANNNNTTC 2 cut(s) 999, 1079
AspA2I CCTAGG 1 cut(s) 253
AsuHPI GGTGA 3 cut(s) 353, 359, 547
AvaI CYCGRG 3 cut(s) 82, 569, 980
AvrII CCTAGG 1 cut(s) 253
BaeGI GKGCMC 1 cut(s) 667
BanII GRGCYC 1 cut(s) 774
BbsI GAAGAC 1 cut(s) 129
Bbv12I GWGCWC 2 cut(s) 774, 885
BbvI GCAGC 2 cut(s) 624, 807
BccI CCATC 5 cut(s) 332, 338, 916, 1002, 1022
BciT130I CCWGG 1 cut(s) 689
BclI TGATCA 1 cut(s) 49
BcoDI GTCTC 3 cut(s) 625, 828, 1291
BcuI ACTAGT 1 cut(s) 172
BfaI CTAG 4 cut(s) 8, 173, 254, 536
BfmI CTRYAG 1 cut(s) 1239
BglII AGATCT 1 cut(s) 984
BisI GCNGC 2 cut(s) 638, 821
BlnI CCTAGG 1 cut(s) 253
BlpI GCTNAGC 1 cut(s) 488
BlsI GCNGC 2 cut(s) 639, 822
Bme1390I CCNGG 1 cut(s) 689
BmeT110I CYCGRG 3 cut(s) 82, 569, 980
BmiI GGNNCC 1 cut(s) 1193
BmrFI CCNGG 1 cut(s) 689
BmsI GCATC 4 cut(s) 229, 1193, 1215, 1253
BpiI GAAGAC 1 cut(s) 129
BpmI CTGGAG 2 cut(s) 671, 824
Bpu1102I GCTNAGC 1 cut(s) 488
Bsa29I ATCGAT 1 cut(s) 237
BsaBI GATNNNNATC 1 cut(s) 348
BsaI GGTCTC 2 cut(s) 625, 828
BsaJI CCNNGG 2 cut(s) 253, 624
BsaXI ACNNNNNCTCC 1 cut(s) 1288
Bsc4I CCNNNNNNNGG 3 cut(s) 259, 844, 1216
Bse1I ACTGG 5 cut(s) 15, 201, 300, 606, 807
Bse8I GATNNNNATC 1 cut(s) 348
BseBI CCWGG 1 cut(s) 689
BseCI ATCGAT 1 cut(s) 237
BseDI CCNNGG 2 cut(s) 253, 624
BseGI GGATG 5 cut(s) 697, 949, 1033, 1206, 1208
BseJI GATNNNNATC 1 cut(s) 348
BseLI CCNNNNNNNGG 3 cut(s) 259, 844, 1216
BseMII CTCAG 3 cut(s) 236, 503, 787
BseNI ACTGG 5 cut(s) 15, 201, 300, 606, 807
BseRI GAGGAG 4 cut(s) 196, 1109, 1112, 1235
BseSI GKGCMC 1 cut(s) 667
BseXI GCAGC 2 cut(s) 624, 807
BseYI CCCAGC 1 cut(s) 478
BsgI GTGCAG 1 cut(s) 225
Bsh1236I CGCG 1 cut(s) 1067
BshFI GGCC 2 cut(s) 926, 1184
BshVI ATCGAT 1 cut(s) 237
BsiHKAI GWGCWC 2 cut(s) 774, 885
BsiHKCI CYCGRG 3 cut(s) 82, 569, 980
BslI CCNNNNNNNGG 3 cut(s) 259, 844, 1216
BsmAI GTCTC 3 cut(s) 625, 828, 1291
BsmI GAATGC 1 cut(s) 959
BsnI GGCC 2 cut(s) 926, 1184
Bso31I GGTCTC 2 cut(s) 625, 828
BsoBI CYCGRG 3 cut(s) 82, 569, 980
Bsp1286I GDGCHC 3 cut(s) 667, 774, 885
Bsp143I GATC 4 cut(s) 49, 97, 349, 984
Bsp1720I GCTNAGC 1 cut(s) 488
BspACI CCGC 2 cut(s) 635, 1067
BspANI GGCC 2 cut(s) 926, 1184
BspCNI CTCAG 3 cut(s) 235, 504, 786
BspDI ATCGAT 1 cut(s) 237
BspFNI CGCG 1 cut(s) 1067
BspLI GGNNCC 1 cut(s) 1193
BspPI GGATC 1 cut(s) 105
BspTNI GGTCTC 2 cut(s) 625, 828
BsrI ACTGG 5 cut(s) 15, 201, 300, 606, 807
BssECI CCNNGG 2 cut(s) 253, 624
BssMI GATC 4 cut(s) 49, 97, 349, 984
BssT1I CCWWGG 2 cut(s) 253, 624
Bst2UI CCWGG 1 cut(s) 689
BstAPI GCANNNNNTGC 1 cut(s) 1136
BstC8I GCNNGC 2 cut(s) 485, 1038
BstDEI CTNAG 6 cut(s) 42, 222, 383, 488, 512, 773
BstF5I GGATG 5 cut(s) 697, 949, 1033, 1206, 1208
BstFNI CGCG 1 cut(s) 1067
BstKTI GATC 4 cut(s) 52, 100, 352, 987
BstMAI GTCTC 3 cut(s) 625, 828, 1291
BstMBI GATC 4 cut(s) 49, 97, 349, 984
BstMWI GCNNNNNNNGC 6 cut(s) 11, 484, 489, 1127, 1136, 1145
BstNI CCWGG 1 cut(s) 689
BstNSI RCATGY 4 cut(s) 487, 679, 1016, 1051
BstSCI CCNGG 1 cut(s) 687
BstSFI CTRYAG 1 cut(s) 1239
BstSLI GKGCMC 1 cut(s) 667
BstUI CGCG 1 cut(s) 1067
BstV1I GCAGC 2 cut(s) 624, 807
BstV2I GAAGAC 1 cut(s) 129
BstX2I RGATCY 1 cut(s) 984
BstYI RGATCY 1 cut(s) 984
Bsu15I ATCGAT 1 cut(s) 237
BsuRI GGCC 2 cut(s) 926, 1184
BsuTUI ATCGAT 1 cut(s) 237
BtsCI GGATG 5 cut(s) 697, 949, 1033, 1206, 1208
BtsIMutI CAGTG 3 cut(s) 208, 293, 781
Cac8I GCNNGC 2 cut(s) 485, 1038
CaiI CAGNNNCTG 1 cut(s) 1247
ClaI ATCGAT 1 cut(s) 237
CseI GACGC 1 cut(s) 965
Csp6I GTAC 4 cut(s) 265, 673, 853, 966
CviQI GTAC 4 cut(s) 265, 673, 853, 966
DdeI CTNAG 6 cut(s) 42, 222, 383, 488, 512, 773
DpnI GATC 4 cut(s) 51, 99, 351, 986
DpnII GATC 4 cut(s) 49, 97, 349, 984
Ecl136II GAGCTC 1 cut(s) 772
Eco130I CCWWGG 2 cut(s) 253, 624
Eco24I GRGCYC 1 cut(s) 774
Eco31I GGTCTC 2 cut(s) 625, 828
Eco32I GATATC 1 cut(s) 949
Eco53kI GAGCTC 1 cut(s) 772
Eco57I CTGAAG 1 cut(s) 1143
Eco88I CYCGRG 3 cut(s) 82, 569, 980
EcoICRI GAGCTC 1 cut(s) 772
EcoRII CCWGG 1 cut(s) 687
EcoRV GATATC 1 cut(s) 949
EcoT14I CCWWGG 2 cut(s) 253, 624
EcoT22I ATGCAT 2 cut(s) 111, 1208
EcoT38I GRGCYC 1 cut(s) 774
ErhI CCWWGG 2 cut(s) 253, 624
FalI AAGNNNNNCTT 6 cut(s) 446, 478, 531, 563, 722, 754
FbaI TGATCA 1 cut(s) 49
Fnu4HI GCNGC 2 cut(s) 638, 821
FokI GGATG 5 cut(s) 704, 956, 1040, 1193, 1215
FriOI GRGCYC 1 cut(s) 774
Fsp4HI GCNGC 2 cut(s) 638, 821
FspBI CTAG 4 cut(s) 8, 173, 254, 536
GluI GCNGC 2 cut(s) 638, 821
GsaI CCCAGC 1 cut(s) 482
GsuI CTGGAG 2 cut(s) 671, 824
HaeIII GGCC 2 cut(s) 926, 1184
HgaI GACGC 1 cut(s) 965
HincII GTYRAC 1 cut(s) 681
HindII GTYRAC 1 cut(s) 681
HindIII AAGCTT 5 cut(s) 460, 490, 696, 1146, 1167
HinfI GANTC 3 cut(s) 116, 572, 870
HphI GGTGA 3 cut(s) 353, 359, 547
Hpy166II GTNNAC 1 cut(s) 681
Hpy188I TCNGA 4 cut(s) 121, 225, 513, 736
Hpy188III TCNNGA 4 cut(s) 8, 569, 650, 982
Hpy8I GTNNAC 1 cut(s) 681
Hpy99I CGWCG 3 cut(s) 66, 672, 959
HpyAV CCTTC 3 cut(s) 1102, 1106, 1193
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 484, 489, 1127, 1136, 1145
HpyF3I CTNAG 6 cut(s) 42, 222, 383, 488, 512, 773
Ksp22I TGATCA 1 cut(s) 49
Kzo9I GATC 4 cut(s) 49, 97, 349, 984
Lsp1109I GCAGC 2 cut(s) 624, 807
LweI GCATC 4 cut(s) 229, 1193, 1215, 1253
MaeI CTAG 4 cut(s) 8, 173, 254, 536
MaeIII GTNAC 2 cut(s) 1253, 1304
MalI GATC 4 cut(s) 51, 99, 351, 986
MboI GATC 4 cut(s) 49, 97, 349, 984
MboII GAAGA 6 cut(s) 134, 173, 299, 539, 551, 986
MfeI CAATTG 1 cut(s) 1018
MflI RGATCY 1 cut(s) 984
MhlI GDGCHC 3 cut(s) 667, 774, 885
MlyI GAGTC 2 cut(s) 581, 879
MnlI CCTC 9 cut(s) 174, 177, 440, 507, 648, 1087, 1090, 1174, 1213
Mph1103I ATGCAT 2 cut(s) 111, 1208
MroXI GAANNNNTTC 2 cut(s) 999, 1079
MseI TTAA 2 cut(s) 464, 719
MslI CAYNNNNRTG 4 cut(s) 306, 324, 330, 917
MspA1I CMGCKG 2 cut(s) 637, 1040
MspR9I CCNGG 1 cut(s) 689
MunI CAATTG 1 cut(s) 1018
Mva1269I GAATGC 1 cut(s) 959
MvaI CCWGG 1 cut(s) 689
MvnI CGCG 1 cut(s) 1067
MwoI GCNNNNNNNGC 6 cut(s) 11, 484, 489, 1127, 1136, 1145
NdeII GATC 4 cut(s) 49, 97, 349, 984
NlaIV GGNNCC 1 cut(s) 1193
NsiI ATGCAT 2 cut(s) 111, 1208
NspI RCATGY 4 cut(s) 487, 679, 1016, 1051
OliI CACNNNNGTG 1 cut(s) 917
PaeI GCATGC 1 cut(s) 487
PaeR7I CTCGAG 2 cut(s) 569, 980
PciI ACATGT 1 cut(s) 675
PctI GAATGC 1 cut(s) 959
PdmI GAANNNNTTC 2 cut(s) 999, 1079
PfeI GAWTC 1 cut(s) 116
PkrI GCNGC 2 cut(s) 639, 822
PleI GAGTC 2 cut(s) 580, 878
PpsI GAGTC 2 cut(s) 580, 878
PscI ACATGT 1 cut(s) 675
Psp124BI GAGCTC 1 cut(s) 774
Psp6I CCWGG 1 cut(s) 687
PspFI CCCAGC 1 cut(s) 478
PspGI CCWGG 1 cut(s) 687
PspN4I GGNNCC 1 cut(s) 1193
PstNI CAGNNNCTG 1 cut(s) 1247
PsuI RGATCY 1 cut(s) 984
PvuII CAGCTG 1 cut(s) 1040
RsaI GTAC 4 cut(s) 266, 674, 854, 967
RsaNI GTAC 4 cut(s) 265, 673, 853, 966
RseI CAYNNNNRTG 4 cut(s) 306, 324, 330, 917
SacI GAGCTC 1 cut(s) 774
SaqAI TTAA 2 cut(s) 464, 719
SatI GCNGC 2 cut(s) 638, 821
Sau3AI GATC 4 cut(s) 49, 97, 349, 984
SchI GAGTC 2 cut(s) 581, 879
ScrFI CCNGG 1 cut(s) 689
SduI GDGCHC 3 cut(s) 667, 774, 885
SfaNI GCATC 4 cut(s) 229, 1193, 1215, 1253
SfcI CTRYAG 1 cut(s) 1239
Sfr274I CTCGAG 2 cut(s) 569, 980
SlaI CTCGAG 2 cut(s) 569, 980
SmiMI CAYNNNNRTG 4 cut(s) 306, 324, 330, 917
SmlI CTYRAG 2 cut(s) 569, 980
SmoI CTYRAG 2 cut(s) 569, 980
SpeI ACTAGT 1 cut(s) 172
SphI GCATGC 1 cut(s) 487
SsiI CCGC 2 cut(s) 635, 1067
SspI AATATT 2 cut(s) 417, 1056
SspMI CTAG 4 cut(s) 8, 173, 254, 536
SstI GAGCTC 1 cut(s) 774
StyD4I CCNGG 1 cut(s) 687
StyI CCWWGG 2 cut(s) 253, 624
TaqI TCGA 4 cut(s) 61, 237, 570, 981
TaqII GACCGA 1 cut(s) 852
TatI WGTACW 1 cut(s) 852
TfiI GAWTC 1 cut(s) 116
Tru1I TTAA 2 cut(s) 464, 719
Tru9I TTAA 2 cut(s) 464, 719
TscAI CASTG 3 cut(s) 208, 300, 781
TseI GCWGC 2 cut(s) 637, 820
TspDTI ATGAA 7 cut(s) 242, 396, 513, 708, 723, 1101, 1121
TspGWI ACGGA 1 cut(s) 79
TspRI CASTG 3 cut(s) 208, 300, 781
XapI RAATTY 2 cut(s) 37, 906
XbaI TCTAGA 1 cut(s) 7
XceI RCATGY 4 cut(s) 487, 679, 1016, 1051
XcmI CCANNNNNNNNNTGG 1 cut(s) 893
XhoI CTCGAG 2 cut(s) 569, 980
XmaJI CCTAGG 1 cut(s) 253
XmnI GAANNNNTTC 2 cut(s) 999, 1079
XspI CTAG 4 cut(s) 8, 173, 254, 536
Zsp2I ATGCAT 2 cut(s) 111, 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.