FvH4_3g21391

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000053
Physical Location & Seq
Forward (+)
14474193 .. 14476285
2093 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g21391.t1

Sequence Viewer

Length: 1212 bp
ATGCTAAGCTTGTATGAAGCAACGCATCTTAGGGTTCATGGAGAAGAAATATTAGAAGAGGCTCTTGTTTTCACCACCAATCACCTTGAGTTGGCGATAAGCCAAGTAAGCTGTCCACTAAAAGCACAAATATCTGAAGCCCTAGAAAGACCTATGTGGAGAAGTCTAGAGAGACTATCGGCGAGGAATTACATACCAATATACCAAGCCACGACTTCGCATAATGAAGCATTACTGAAACTTGCAAAGCTAGATTTCAATCTGGTCCAAGCTTTATACAAAGAGGAGCTTAGTGAGGTTTCCAGGTGGTGGAAAGAGCTAGATTTTGAAAGGAAAATGCCTTTTGCAAGACATAGAATTGTGGAGTGTTTCTTTTGGATGATGGGAATGTATTATGAACCAAAATACTCGGTTGGGAGAAAGATTGGAACAAAACTGTGTGCGATGGCTACAATGTTAGATGACATCTTCGATTCATATGGCACATTTGAGGAACTCAAGATATTTCGCCAAGTAATTGAGAGGTGGGATGTCAACTGTTGCATGGATGACCTTCCACGATACATGAAAGTATATTATCATTCACTTTGTGATGTGATGAATGAAATTGAGGAAGAACTGGAAAAGCTAGGAATGCCAGACCGAATCCACTACGCAAAACAAGTCTTGAAGGATCAAGCCAGAGACTACCTCGTTGAGGCCGAATGGCTCCACGAAGGATGTACCCTAAGCATGGAGGAGTATCTGCCCGTCAGAGTACAATCTGTTGGTGTTTGTATGACTGTAGTGTTTTCTTTACTTGGAATGAATGATAATATTACCAAGGAAACATTTGAGTGGGTTTTGAAGTACCCTAAAATTGTTATGGCTTCGAGCTTCATTTTTAGGTTCATGGATGACATTGGGGGGAGCAAGCATGAGAAACAAAAAGGGGATGTTGATTCTAGTATTGATTGCTATATGAAGCAATATGGGGTCTCAAAGGAAGAGGCAATTGAAGTGCTCGACAAACAAATTGTGGATTCATGGAAGGAAATAAATGAGGATTTACTTAGACCAACTGCTGTGCCAATGTATGTGCTCTTGCGTGTTATGAATTTCTCAAGAGACGTTGATCTGGTTTATAAAGGAGAAGATGGGTTTACACATGTTGGGAAAGTAGTAAAACATGCTGTCGCTGCACTTTTTGGTGATCCATTGCCACTCGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

404

Amino Acids

47.06

Weight (kDa)

5.17

Isoelectric Point (pI)

48.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 1 - 48 7.1e-12 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 105 - 345 1.4e-89 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 145 - 345 1.1e-55 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1125
AccB7I CCANNNNNTGG 1 cut(s) 309
AclWI GGATC 2 cut(s) 681, 1187
AcsI RAATTY 1 cut(s) 1096
AcuI CTGAAG 1 cut(s) 156
AdeI CACNNNGTG 1 cut(s) 590
AfaI GTAC 3 cut(s) 724, 759, 851
AfiI CCNNNNNNNGG 4 cut(s) 91, 309, 697, 733
AflIII ACRYGT 1 cut(s) 1147
AgsI TTSAA 5 cut(s) 259, 329, 670, 847, 998
AjnI CCWGG 1 cut(s) 302
AluBI AGCT 8 cut(s) 9, 111, 250, 272, 289, 319, 628, 876
AluI AGCT 8 cut(s) 9, 111, 250, 272, 289, 319, 628, 876
Alw21I GWGCWC 2 cut(s) 1005, 1083
Alw26I GTCTC 4 cut(s) 166, 678, 982, 1101
AlwI GGATC 2 cut(s) 681, 1187
AoxI GGCC 1 cut(s) 699
ApeKI GCWGC 1 cut(s) 1178
ApoI RAATTY 1 cut(s) 1096
AspS9I GGNCC 1 cut(s) 265
AsuHPI GGTGA 3 cut(s) 64, 74, 1202
AvaII GGWCC 1 cut(s) 265
Bbv12I GWGCWC 2 cut(s) 1005, 1083
BbvI GCAGC 1 cut(s) 1165
BccI CCATC 3 cut(s) 376, 439, 1130
BciT130I CCWGG 1 cut(s) 304
BcoDI GTCTC 4 cut(s) 166, 678, 982, 1101
BfaI CTAG 6 cut(s) 143, 167, 251, 320, 629, 945
BfmI CTRYAG 1 cut(s) 783
BisI GCNGC 1 cut(s) 1179
BlpI GCTNAGC 1 cut(s) 5
BlsI GCNGC 1 cut(s) 1180
Bme1390I CCNGG 1 cut(s) 304
Bme18I GGWCC 1 cut(s) 265
BmgT120I GGNCC 1 cut(s) 265
BmiI GGNNCC 1 cut(s) 710
BmrFI CCNGG 1 cut(s) 304
BmsI GCATC 1 cut(s) 34
BplI GAGNNNNNCTC 2 cut(s) 675, 707
Bpu10I CCTNAGC 1 cut(s) 728
Bpu1102I GCTNAGC 1 cut(s) 5
BpuEI CTTGAG 3 cut(s) 107, 482, 1087
BsaBI GATNNNNATC 1 cut(s) 258
BsaI GGTCTC 1 cut(s) 982
BsaJI CCNNGG 1 cut(s) 822
Bsc4I CCNNNNNNNGG 4 cut(s) 91, 309, 697, 733
Bse1I ACTGG 1 cut(s) 624
Bse3DI GCAATG 1 cut(s) 1196
Bse8I GATNNNNATC 1 cut(s) 258
BseBI CCWGG 1 cut(s) 304
BseDI CCNNGG 1 cut(s) 822
BseGI GGATG 6 cut(s) 384, 535, 553, 725, 901, 940
BseJI GATNNNNATC 1 cut(s) 258
BseLI CCNNNNNNNGG 4 cut(s) 91, 309, 697, 733
BseMI GCAATG 1 cut(s) 1196
BseNI ACTGG 1 cut(s) 624
BseRI GAGGAG 2 cut(s) 299, 752
BseXI GCAGC 1 cut(s) 1165
BsgI GTGCAG 1 cut(s) 1164
BshFI GGCC 1 cut(s) 701
BsiHKAI GWGCWC 2 cut(s) 1005, 1083
BslI CCNNNNNNNGG 4 cut(s) 91, 309, 697, 733
BsmAI GTCTC 4 cut(s) 166, 678, 982, 1101
BsmBI CGTCTC 1 cut(s) 1101
BsmI GAATGC 1 cut(s) 639
BsnI GGCC 1 cut(s) 701
Bso31I GGTCTC 1 cut(s) 982
Bsp1286I GDGCHC 2 cut(s) 1005, 1083
Bsp143I GATC 3 cut(s) 673, 1114, 1192
Bsp1720I GCTNAGC 1 cut(s) 5
BspANI GGCC 1 cut(s) 701
BspLI GGNNCC 1 cut(s) 710
BspPI GGATC 2 cut(s) 681, 1187
BspTNI GGTCTC 1 cut(s) 982
BsrDI GCAATG 1 cut(s) 1196
BsrI ACTGG 1 cut(s) 624
BssECI CCNNGG 1 cut(s) 822
BssMI GATC 3 cut(s) 673, 1114, 1192
BssT1I CCWWGG 1 cut(s) 822
Bst2UI CCWGG 1 cut(s) 304
Bst4CI ACNGT 3 cut(s) 438, 539, 784
Bst6I CTCTTC 2 cut(s) 51, 981
BstC8I GCNNGC 1 cut(s) 914
BstDEI CTNAG 5 cut(s) 5, 29, 290, 728, 1052
BstENI CCTNNNNNAGG 1 cut(s) 695
BstF5I GGATG 6 cut(s) 384, 535, 553, 725, 901, 940
BstKTI GATC 3 cut(s) 676, 1117, 1195
BstMAI GTCTC 4 cut(s) 166, 678, 982, 1101
BstMBI GATC 3 cut(s) 673, 1114, 1192
BstMWI GCNNNNNNNGC 3 cut(s) 108, 634, 1178
BstNI CCWGG 1 cut(s) 304
BstNSI RCATGY 2 cut(s) 1151, 1172
BstSCI CCNGG 1 cut(s) 302
BstSFI CTRYAG 1 cut(s) 783
BstV1I GCAGC 1 cut(s) 1165
BsuRI GGCC 1 cut(s) 701
BtgZI GCGATG 1 cut(s) 458
BtsCI GGATG 6 cut(s) 384, 535, 553, 725, 901, 940
Cac8I GCNNGC 1 cut(s) 914
Cfr13I GGNCC 1 cut(s) 265
Csp6I GTAC 3 cut(s) 723, 758, 850
CviAII CATG 9 cut(s) 38, 544, 565, 733, 892, 917, 1026, 1148, 1169
CviQI GTAC 3 cut(s) 723, 758, 850
DdeI CTNAG 5 cut(s) 5, 29, 290, 728, 1052
DpnI GATC 3 cut(s) 675, 1116, 1194
DpnII GATC 3 cut(s) 673, 1114, 1192
DraIII CACNNNGTG 1 cut(s) 590
Eam1104I CTCTTC 2 cut(s) 51, 981
EarI CTCTTC 2 cut(s) 51, 981
Eco130I CCWWGG 1 cut(s) 822
Eco31I GGTCTC 1 cut(s) 982
Eco47I GGWCC 1 cut(s) 265
Eco57I CTGAAG 1 cut(s) 156
EcoNI CCTNNNNNAGG 1 cut(s) 695
EcoRII CCWGG 1 cut(s) 302
EcoT14I CCWWGG 1 cut(s) 822
ErhI CCWWGG 1 cut(s) 822
Esp3I CGTCTC 1 cut(s) 1101
FaeI CATG 9 cut(s) 41, 547, 568, 736, 895, 920, 1029, 1151, 1172
FalI AAGNNNNNCTT 4 cut(s) 48, 80, 273, 305
FatI CATG 9 cut(s) 37, 543, 564, 732, 891, 916, 1025, 1147, 1168
FauNDI CATATG 1 cut(s) 478
Fnu4HI GCNGC 1 cut(s) 1179
FokI GGATG 6 cut(s) 391, 542, 560, 732, 908, 947
Fsp4HI GCNGC 1 cut(s) 1179
FspBI CTAG 6 cut(s) 143, 167, 251, 320, 629, 945
GluI GCNGC 1 cut(s) 1179
HaeIII GGCC 1 cut(s) 701
Hin1II CATG 9 cut(s) 41, 547, 568, 736, 895, 920, 1029, 1151, 1172
HincII GTYRAC 1 cut(s) 535
HindII GTYRAC 1 cut(s) 535
HindIII AAGCTT 2 cut(s) 7, 270
HinfI GANTC 4 cut(s) 473, 645, 941, 1022
HphI GGTGA 3 cut(s) 64, 74, 1202
Hpy166II GTNNAC 3 cut(s) 116, 535, 1143
Hpy188I TCNGA 2 cut(s) 136, 755
Hpy188III TCNNGA 4 cut(s) 167, 499, 667, 1104
Hpy8I GTNNAC 3 cut(s) 116, 535, 1143
HpyAV CCTTC 4 cut(s) 563, 664, 710, 1024
HpyCH4III ACNGT 3 cut(s) 438, 539, 784
HpyCH4IV ACGT 1 cut(s) 1110
HpyCH4V TGCA 4 cut(s) 245, 347, 543, 1181
HpyF10VI GCNNNNNNNGC 3 cut(s) 108, 634, 1178
HpyF3I CTNAG 5 cut(s) 5, 29, 290, 728, 1052
HpySE526I ACGT 1 cut(s) 1110
Hsp92II CATG 9 cut(s) 41, 547, 568, 736, 895, 920, 1029, 1151, 1172
Kzo9I GATC 3 cut(s) 673, 1114, 1192
LmnI GCTCC 3 cut(s) 286, 714, 909
LpnPI CCDG 7 cut(s) 248, 289, 316, 605, 651, 694, 1103
Lsp1109I GCAGC 1 cut(s) 1165
LweI GCATC 1 cut(s) 34
MaeI CTAG 6 cut(s) 143, 167, 251, 320, 629, 945
MaeII ACGT 1 cut(s) 1110
MalI GATC 3 cut(s) 675, 1116, 1194
MboI GATC 3 cut(s) 673, 1114, 1192
MboII GAAGA 6 cut(s) 56, 68, 460, 626, 998, 1145
MfeI CAATTG 1 cut(s) 993
MhlI GDGCHC 2 cut(s) 1005, 1083
MluCI AATT 8 cut(s) 187, 357, 516, 606, 858, 993, 1014, 1096
MslI CAYNNNNRTG 2 cut(s) 835, 1207
MspR9I CCNGG 1 cut(s) 304
MunI CAATTG 1 cut(s) 993
Mva1269I GAATGC 1 cut(s) 639
MvaI CCWGG 1 cut(s) 304
MwoI GCNNNNNNNGC 3 cut(s) 108, 634, 1178
NdeI CATATG 1 cut(s) 478
NdeII GATC 3 cut(s) 673, 1114, 1192
NlaIII CATG 9 cut(s) 41, 547, 568, 736, 895, 920, 1029, 1151, 1172
NlaIV GGNNCC 1 cut(s) 710
NspI RCATGY 2 cut(s) 1151, 1172
PciI ACATGT 1 cut(s) 1147
PcsI WCGNNNNNNNCGW 1 cut(s) 699
PctI GAATGC 1 cut(s) 639
PfeI GAWTC 4 cut(s) 473, 645, 941, 1022
PflMI CCANNNNNTGG 1 cut(s) 309
PkrI GCNGC 1 cut(s) 1180
PscI ACATGT 1 cut(s) 1147
PsiI TTATAA 1 cut(s) 1125
Psp6I CCWGG 1 cut(s) 302
PspGI CCWGG 1 cut(s) 302
PspN4I GGNNCC 1 cut(s) 710
PspPI GGNCC 1 cut(s) 265
RsaI GTAC 3 cut(s) 724, 759, 851
RsaNI GTAC 3 cut(s) 723, 758, 850
RseI CAYNNNNRTG 2 cut(s) 835, 1207
SatI GCNGC 1 cut(s) 1179
Sau3AI GATC 3 cut(s) 673, 1114, 1192
Sau96I GGNCC 1 cut(s) 265
ScrFI CCNGG 1 cut(s) 304
SduI GDGCHC 2 cut(s) 1005, 1083
SfaNI GCATC 1 cut(s) 34
SfcI CTRYAG 1 cut(s) 783
SinI GGWCC 1 cut(s) 265
SmiMI CAYNNNNRTG 2 cut(s) 835, 1207
SmlI CTYRAG 3 cut(s) 86, 497, 1102
SmoI CTYRAG 3 cut(s) 86, 497, 1102
Sse9I AATT 8 cut(s) 187, 357, 516, 606, 858, 993, 1014, 1096
SspI AATATT 2 cut(s) 51, 817
SspMI CTAG 6 cut(s) 143, 167, 251, 320, 629, 945
StyD4I CCNGG 1 cut(s) 302
StyI CCWWGG 1 cut(s) 822
TaaI ACNGT 3 cut(s) 438, 539, 784
TaiI ACGT 1 cut(s) 1113
TaqI TCGA 4 cut(s) 471, 872, 1005, 1206
TaqII GACCGA 1 cut(s) 657
TasI AATT 8 cut(s) 187, 357, 516, 606, 858, 993, 1014, 1096
TatI WGTACW 1 cut(s) 757
TfiI GAWTC 4 cut(s) 473, 645, 941, 1022
TseI GCWGC 1 cut(s) 1178
Van91I CCANNNNNTGG 1 cut(s) 309
VpaK11BI GGWCC 1 cut(s) 265
XagI CCTNNNNNAGG 1 cut(s) 695
XapI RAATTY 1 cut(s) 1096
XbaI TCTAGA 1 cut(s) 166
XceI RCATGY 2 cut(s) 1151, 1172
XspI CTAG 6 cut(s) 143, 167, 251, 320, 629, 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.