RLG00000030080

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000053
Physical Location & Seq
Forward (+)
54873489 .. 54875838
2350 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030080

Sequence Viewer

Length: 1671 bp
ATGTCTGTCCCTGCTTTAGCGTCTGAGCTAGCTCAACCCTCGAATATTACTGCCACGCCTGATGTTACTCGACGTTTAGCTAATTATTCCCCAAGCATTTGGGGTGATCATTTTCTGTCATATGCTTCCATAGAAGCGGCAGATAGTAAAAGTAAGAAACATATCCAAGACTTGAAGGAAGAGCTGAAGAGGATGATAATGGCTCCAGCGAAAAGGCCTTCTCAAAAATTGCATTTCATCAACCACATTCAGCGCTTAGGTGTCTCATACCATTTTGAAGATGAGATTGACCAAATTTTGCAGCAAGTTCAACGAGAAGAAGAATATCTTTGCACCACTGCTCTAAGCTTTCGATTGCTTAGACAACAAGGTTATAACATTTCATGCAATACGTTTAACAAGTTCAAGGATAATGATGGAAGATTTAAAAAATGGCTTATTGATGATGTACTCAGCCTGTTAAGTTTGTATGAAGCCTCACATCTTCAGATACCCGGGGAGGATATACTAAACGAGGCACTAACCTTCACCACCGCTCATCTCGAGTCTGCAGCACACCGCTTAAGCTCATCGTCTCTGCTTTGGAAACAAGTAACTCATGCCTTATATCAACCACTTTGGCAGGGCATGCCCAGGATTGAAGCGAGGCATTACTTGTCTATTTACCAAGAAGATGATTCACATAATGAAACTCTCCTGAATTTTGCAAAGCTGGATTTCAACACTGTGGAGAAAGTTCATCAGAAAGAACTAAGTGAAATTACGAGGTGGTGGAAGGACTTGGACTTTGTAACCAAGCTACCTTTTGCAAGAGACAAGGTAGTTGAGGCCTATTTTTGGGCTCTGGGAATCTACTTTCAGCCGGAATATTACCTTGCCAGGATGGTATTGGCCAAAGCTATTGCTATAATTACAGTCATTGACGACATATACGATGTGCGTGGCACGTATGAAGAACTAGAGAGCTTTACTAAAGCTATTGAGAGGTGGAATATTTCTGTTGTTGATCAACTACCAGATTATATGAAAGTGTGTTATGAAGTGCTGTTGAATTTCTTCACCGAACTTGAAGAAAGTCTGGCGAATAAGGGAATCTCATACCGCATCCACTATGCGAGAGAAGCATTTAAAGTTCAAGTCAGAACTTACTTCCAGGAAGCGAAATGGTTGAAACAGAAGTACACACCAACACTGGAAGAGTACATGTCTGTGGAACGCAATACATCCTTCTTCATGGTGGCAGTAGTGTCATTTGTTGGAATGGGAGTTATTGTTACAAAAGACTCCATGGATTGGGTTTTCAGTGAACCTAAGATTTCAAAGGCCGCATCTATAATTGGTAGACTCATGAATGACCTTGTAGGCCATAAGTTTGAGCAAAAGAGAGAACACATTGCATCAGCAGTGGAATGCTACATGAAGCAATATGGTGTCACAGAAGAAGAAGCAGAAGTTGAGTTAACTAAACAAGTGAATGACGCATGGAAAGACATAAACGAAGAGTGGCTCGATGCAACCTCTATCCCTAGGCCCCTACTCTTGCTGATTTTGAACTTTGCACGTTCTAGTGAAGTTCTATACAAGGGTGAAGATGTGTTTACTCATTTTGAAAATGTGCTCAAGGGTCATGTAGTTTCTCTCTTTATCGAACCCGTGCCCATATTAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

557

Amino Acids

64.6

Weight (kDa)

5.54

Isoelectric Point (pI)

54.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 33 - 202 1.3e-54 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 259 - 497 8.4e-95 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 299 - 497 1.1e-56 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 375
AccB7I CCANNNNNTGG 1 cut(s) 1293
AccBSI CCGCTC 1 cut(s) 536
AccI GTMKAC 1 cut(s) 1342
AciI CCGC 5 cut(s) 137, 534, 559, 1102, 1326
AcoI YGGCCR 1 cut(s) 891
AcsI RAATTY 3 cut(s) 294, 700, 1051
AcuI CTGAAG 2 cut(s) 206, 470
AfaI GTAC 3 cut(s) 450, 1181, 1202
AfeI AGCGCT 1 cut(s) 254
AfiI CCNNNNNNNGG 2 cut(s) 837, 1293
AflII CTTAAG 1 cut(s) 562
AflIII ACRYGT 1 cut(s) 1203
AjnI CCWGG 3 cut(s) 632, 878, 1152
Alw21I GWGCWC 1 cut(s) 1620
Alw26I GTCTC 3 cut(s) 268, 579, 807
Ama87I CYCGRG 2 cut(s) 494, 542
Aor51HI AGCGCT 1 cut(s) 254
AoxI GGCC 6 cut(s) 215, 828, 891, 1323, 1363, 1529
ApeKI GCWGC 2 cut(s) 301, 551
ApoI RAATTY 3 cut(s) 294, 700, 1051
ArsI GACNNNNNNTTYG 2 cut(s) 770, 802
Asp700I GAANNNNTTC 1 cut(s) 1055
AspA2I CCTAGG 1 cut(s) 1526
AspLEI GCGC 1 cut(s) 255
AspS9I GGNCC 1 cut(s) 1530
AsuC2I CCSGG 2 cut(s) 495, 496
AsuHPI GGTGA 4 cut(s) 116, 520, 1051, 1598
AsuNHI GCTAGC 1 cut(s) 28
AvaI CYCGRG 2 cut(s) 494, 542
AvrII CCTAGG 1 cut(s) 1526
BaeGI GKGCMC 1 cut(s) 1659
BalI TGGCCA 1 cut(s) 893
BanII GRGCYC 1 cut(s) 844
Bbv12I GWGCWC 1 cut(s) 1620
BbvI GCAGC 2 cut(s) 313, 563
BccI CCATC 2 cut(s) 410, 877
BciT130I CCWGG 3 cut(s) 634, 880, 1154
BclI TGATCA 2 cut(s) 106, 1006
BcnI CCSGG 2 cut(s) 495, 496
BcoDI GTCTC 3 cut(s) 268, 579, 807
BfaI CTAG 4 cut(s) 29, 959, 1527, 1566
BfmI CTRYAG 1 cut(s) 549
BfoI RGCGCY 1 cut(s) 256
BfrI CTTAAG 1 cut(s) 562
BisI GCNGC 4 cut(s) 138, 302, 552, 1326
BlnI CCTAGG 1 cut(s) 1526
BlsI GCNGC 4 cut(s) 139, 303, 553, 1327
Bme1390I CCNGG 5 cut(s) 495, 496, 634, 880, 1154
BmeT110I CYCGRG 2 cut(s) 494, 542
BmgT120I GGNCC 1 cut(s) 1530
BmiI GGNNCC 2 cut(s) 204, 1532
BmrFI CCNGG 5 cut(s) 495, 496, 634, 880, 1154
BmsI GCATC 4 cut(s) 1113, 1337, 1406, 1501
BmtI GCTAGC 1 cut(s) 32
BpmI CTGGAG 1 cut(s) 189
Bpu10I CCTNAGC 1 cut(s) 256
BpuEI CTTGAG 1 cut(s) 1604
BpuMI CCSGG 2 cut(s) 495, 496
BsaAI YACGTR 1 cut(s) 948
BsaJI CCNNGG 5 cut(s) 494, 495, 632, 1287, 1526
BsaXI ACNNNNNCTCC 2 cut(s) 1257, 1287
Bsc4I CCNNNNNNNGG 2 cut(s) 837, 1293
Bse1I ACTGG 1 cut(s) 1197
Bse3DI GCAATG 1 cut(s) 1392
BseBI CCWGG 3 cut(s) 634, 880, 1154
BseDI CCNNGG 5 cut(s) 494, 495, 632, 1287, 1526
BseGI GGATG 4 cut(s) 198, 888, 1104, 1223
BseLI CCNNNNNNNGG 2 cut(s) 837, 1293
BseMI GCAATG 1 cut(s) 1392
BseMII CTCAG 2 cut(s) 15, 466
BseNI ACTGG 1 cut(s) 1197
BseSI GKGCMC 1 cut(s) 1659
BseXI GCAGC 2 cut(s) 313, 563
BshFI GGCC 6 cut(s) 217, 830, 893, 1325, 1365, 1531
BsiHKAI GWGCWC 1 cut(s) 1620
BsiHKCI CYCGRG 2 cut(s) 494, 542
BsiSI CCGG 2 cut(s) 495, 863
BslI CCNNNNNNNGG 2 cut(s) 837, 1293
BsmAI GTCTC 3 cut(s) 268, 579, 807
BsmBI CGTCTC 1 cut(s) 579
BsmI GAATGC 1 cut(s) 1415
BsnI GGCC 6 cut(s) 217, 830, 893, 1325, 1365, 1531
BsoBI CYCGRG 2 cut(s) 494, 542
Bsp1286I GDGCHC 3 cut(s) 844, 1620, 1659
Bsp143I GATC 2 cut(s) 106, 1006
Bsp19I CCATGG 1 cut(s) 1287
BspACI CCGC 5 cut(s) 137, 534, 559, 1102, 1326
BspANI GGCC 6 cut(s) 217, 830, 893, 1325, 1365, 1531
BspCNI CTCAG 2 cut(s) 16, 465
BspHI TCATGA 1 cut(s) 1347
BspLI GGNNCC 2 cut(s) 204, 1532
BspMAI CTGCAG 1 cut(s) 553
BspOI GCTAGC 1 cut(s) 32
BspQI GCTCTTC 1 cut(s) 174
BspTI CTTAAG 1 cut(s) 562
BsrBI CCGCTC 1 cut(s) 536
BsrDI GCAATG 1 cut(s) 1392
BsrI ACTGG 1 cut(s) 1197
BssECI CCNNGG 5 cut(s) 494, 495, 632, 1287, 1526
BssMI GATC 2 cut(s) 106, 1006
BssT1I CCWWGG 2 cut(s) 1287, 1526
Bst2UI CCWGG 3 cut(s) 634, 880, 1154
Bst4CI ACNGT 2 cut(s) 727, 916
Bst6I CTCTTC 4 cut(s) 174, 182, 1191, 1494
BstAFI CTTAAG 1 cut(s) 562
BstAPI GCANNNNNTGC 1 cut(s) 628
BstBAI YACGTR 1 cut(s) 948
BstC8I GCNNGC 2 cut(s) 30, 629
BstDEI CTNAG 7 cut(s) 24, 256, 344, 359, 452, 752, 1311
BstDSI CCRYGG 1 cut(s) 1287
BstF5I GGATG 4 cut(s) 198, 888, 1104, 1223
BstH2I RGCGCY 1 cut(s) 256
BstHHI GCGC 1 cut(s) 255
BstKTI GATC 2 cut(s) 109, 1009
BstMAI GTCTC 3 cut(s) 268, 579, 807
BstMBI GATC 2 cut(s) 106, 1006
BstMWI GCNNNNNNNGC 2 cut(s) 628, 1121
BstNI CCWGG 3 cut(s) 634, 880, 1154
BstNSI RCATGY 2 cut(s) 631, 1207
BstSCI CCNGG 5 cut(s) 493, 494, 632, 878, 1152
BstSFI CTRYAG 1 cut(s) 549
BstSLI GKGCMC 1 cut(s) 1659
BstV1I GCAGC 2 cut(s) 313, 563
BstXI CCANNNNNNTGG 1 cut(s) 99
BsuRI GGCC 6 cut(s) 217, 830, 893, 1325, 1365, 1531
BtgI CCRYGG 1 cut(s) 1287
BtsCI GGATG 4 cut(s) 198, 888, 1104, 1223
BtsI GCAGTG 2 cut(s) 336, 1410
BtsIMutI CAGTG 5 cut(s) 336, 723, 1190, 1309, 1410
Cac8I GCNNGC 2 cut(s) 30, 629
CciI TCATGA 1 cut(s) 1347
CfoI GCGC 1 cut(s) 255
Cfr13I GGNCC 1 cut(s) 1530
Cfr9I CCCGGG 1 cut(s) 494
CseI GACGC 2 cut(s) 9, 1487
Csp6I GTAC 3 cut(s) 449, 1180, 1201
CviQI GTAC 3 cut(s) 449, 1180, 1201
DdeI CTNAG 7 cut(s) 24, 256, 344, 359, 452, 752, 1311
DpnI GATC 2 cut(s) 108, 1008
DpnII GATC 2 cut(s) 106, 1006
DraI TTTAAA 2 cut(s) 427, 1129
EaeI YGGCCR 1 cut(s) 891
Eam1104I CTCTTC 4 cut(s) 174, 182, 1191, 1494
EarI CTCTTC 4 cut(s) 174, 182, 1191, 1494
Eco130I CCWWGG 2 cut(s) 1287, 1526
Eco147I AGGCCT 2 cut(s) 217, 830
Eco24I GRGCYC 1 cut(s) 844
Eco47III AGCGCT 1 cut(s) 254
Eco57I CTGAAG 2 cut(s) 206, 470
Eco88I CYCGRG 2 cut(s) 494, 542
EcoO109I RGGNCCY 1 cut(s) 1530
EcoRII CCWGG 3 cut(s) 632, 878, 1152
EcoT14I CCWWGG 2 cut(s) 1287, 1526
EcoT38I GRGCYC 1 cut(s) 844
ErhI CCWWGG 2 cut(s) 1287, 1526
Esp3I CGTCTC 1 cut(s) 579
FalI AAGNNNNNCTT 2 cut(s) 312, 344
FauNDI CATATG 1 cut(s) 121
FbaI TGATCA 2 cut(s) 106, 1006
FblI GTMKAC 1 cut(s) 1342
Fnu4HI GCNGC 4 cut(s) 138, 302, 552, 1326
FokI GGATG 4 cut(s) 205, 895, 1091, 1210
FriOI GRGCYC 1 cut(s) 844
Fsp4HI GCNGC 4 cut(s) 138, 302, 552, 1326
FspBI CTAG 4 cut(s) 29, 959, 1527, 1566
GlaI GCGC 1 cut(s) 254
GluI GCNGC 4 cut(s) 138, 302, 552, 1326
GsuI CTGGAG 1 cut(s) 189
HaeII RGCGCY 1 cut(s) 256
HaeIII GGCC 6 cut(s) 217, 830, 893, 1325, 1365, 1531
HapII CCGG 2 cut(s) 495, 863
HgaI GACGC 2 cut(s) 9, 1487
HhaI GCGC 1 cut(s) 255
Hin6I GCGC 1 cut(s) 253
HinP1I GCGC 1 cut(s) 253
HincII GTYRAC 1 cut(s) 1461
HindII GTYRAC 1 cut(s) 1461
HindIII AAGCTT 1 cut(s) 346
HinfI GANTC 6 cut(s) 545, 677, 849, 1092, 1283, 1344
HpaI GTTAAC 1 cut(s) 1461
HpaII CCGG 2 cut(s) 495, 863
HphI GGTGA 4 cut(s) 116, 520, 1051, 1598
Hpy166II GTNNAC 5 cut(s) 1182, 1307, 1343, 1461, 1599
Hpy188I TCNGA 4 cut(s) 25, 489, 744, 1142
Hpy188III TCNNGA 3 cut(s) 542, 697, 1348
Hpy8I GTNNAC 5 cut(s) 1182, 1307, 1343, 1461, 1599
Hpy99I CGWCG 1 cut(s) 75
HpyAV CCTTC 5 cut(s) 169, 228, 535, 769, 1237
HpyCH4III ACNGT 2 cut(s) 727, 916
HpyCH4IV ACGT 4 cut(s) 73, 392, 947, 1561
HpyF10VI GCNNNNNNNGC 2 cut(s) 628, 1121
HpyF3I CTNAG 7 cut(s) 24, 256, 344, 359, 452, 752, 1311
HpySE526I ACGT 4 cut(s) 73, 392, 947, 1561
HspAI GCGC 1 cut(s) 253
Ksp22I TGATCA 2 cut(s) 106, 1006
KspAI GTTAAC 1 cut(s) 1461
Kzo9I GATC 2 cut(s) 106, 1006
LguI GCTCTTC 1 cut(s) 174
LmnI GCTCC 1 cut(s) 208
Lsp1109I GCAGC 2 cut(s) 313, 563
LweI GCATC 4 cut(s) 1113, 1337, 1406, 1501
MaeI CTAG 4 cut(s) 29, 959, 1527, 1566
MaeII ACGT 4 cut(s) 73, 392, 947, 1561
MaeIII GTNAC 5 cut(s) 64, 592, 790, 1273, 1432
MalI GATC 2 cut(s) 108, 1008
MbiI CCGCTC 1 cut(s) 536
MboI GATC 2 cut(s) 106, 1006
MhlI GDGCHC 3 cut(s) 844, 1620, 1659
MlsI TGGCCA 1 cut(s) 893
MluCI AATT 8 cut(s) 82, 227, 294, 700, 759, 909, 1051, 1335
MluNI TGGCCA 1 cut(s) 893
MlyI GAGTC 3 cut(s) 554, 1277, 1338
MmeI TCCRAC 1 cut(s) 1237
Mox20I TGGCCA 1 cut(s) 893
MroXI GAANNNNTTC 1 cut(s) 1055
MscI TGGCCA 1 cut(s) 893
MseI TTAA 6 cut(s) 396, 426, 461, 563, 1128, 1460
MslI CAYNNNNRTG 1 cut(s) 1208
Msp20I TGGCCA 1 cut(s) 893
MspCI CTTAAG 1 cut(s) 562
MspI CCGG 2 cut(s) 495, 863
MspR9I CCNGG 5 cut(s) 495, 496, 634, 880, 1154
Mva1269I GAATGC 1 cut(s) 1415
MvaI CCWGG 3 cut(s) 634, 880, 1154
MwoI GCNNNNNNNGC 2 cut(s) 628, 1121
NciI CCSGG 2 cut(s) 495, 496
NcoI CCATGG 1 cut(s) 1287
NdeI CATATG 1 cut(s) 121
NdeII GATC 2 cut(s) 106, 1006
NheI GCTAGC 1 cut(s) 28
NlaIV GGNNCC 2 cut(s) 204, 1532
NmuCI GTSAC 1 cut(s) 1432
NspI RCATGY 2 cut(s) 631, 1207
PaeI GCATGC 1 cut(s) 631
PaeR7I CTCGAG 1 cut(s) 542
PagI TCATGA 1 cut(s) 1347
PceI AGGCCT 2 cut(s) 217, 830
PciI ACATGT 1 cut(s) 1203
PciSI GCTCTTC 1 cut(s) 174
PcsI WCGNNNNNNNCGW 1 cut(s) 930
PctI GAATGC 1 cut(s) 1415
PdmI GAANNNNTTC 1 cut(s) 1055
PfeI GAWTC 3 cut(s) 677, 849, 1092
PflMI CCANNNNNTGG 1 cut(s) 1293
PfoI TCCNGGA 1 cut(s) 1152
PkrI GCNGC 4 cut(s) 139, 303, 553, 1327
PleI GAGTC 3 cut(s) 553, 1277, 1338
PpsI GAGTC 3 cut(s) 553, 1277, 1338
Ppu21I YACGTR 1 cut(s) 948
PscI ACATGT 1 cut(s) 1203
PsiI TTATAA 1 cut(s) 375
Psp6I CCWGG 3 cut(s) 632, 878, 1152
PspGI CCWGG 3 cut(s) 632, 878, 1152
PspN4I GGNNCC 2 cut(s) 204, 1532
PspPI GGNCC 1 cut(s) 1530
PstI CTGCAG 1 cut(s) 553
RsaI GTAC 3 cut(s) 450, 1181, 1202
RsaNI GTAC 3 cut(s) 449, 1180, 1201
RseI CAYNNNNRTG 1 cut(s) 1208
SapI GCTCTTC 1 cut(s) 174
SaqAI TTAA 6 cut(s) 396, 426, 461, 563, 1128, 1460
SatI GCNGC 4 cut(s) 138, 302, 552, 1326
Sau3AI GATC 2 cut(s) 106, 1006
Sau96I GGNCC 1 cut(s) 1530
SchI GAGTC 3 cut(s) 554, 1277, 1338
ScrFI CCNGG 5 cut(s) 495, 496, 634, 880, 1154
SduI GDGCHC 3 cut(s) 844, 1620, 1659
SfaNI GCATC 4 cut(s) 1113, 1337, 1406, 1501
SfcI CTRYAG 1 cut(s) 549
Sfr274I CTCGAG 1 cut(s) 542
SlaI CTCGAG 1 cut(s) 542
SmaI CCCGGG 1 cut(s) 496
SmiMI CAYNNNNRTG 1 cut(s) 1208
SmlI CTYRAG 3 cut(s) 542, 562, 1619
SmoI CTYRAG 3 cut(s) 542, 562, 1619
SphI GCATGC 1 cut(s) 631
Sse9I AATT 8 cut(s) 82, 227, 294, 700, 759, 909, 1051, 1335
SseBI AGGCCT 2 cut(s) 217, 830
SsiI CCGC 5 cut(s) 137, 534, 559, 1102, 1326
SspI AATATT 3 cut(s) 46, 869, 994
SspMI CTAG 4 cut(s) 29, 959, 1527, 1566
StuI AGGCCT 2 cut(s) 217, 830
StyD4I CCNGG 5 cut(s) 493, 494, 632, 878, 1152
StyI CCWWGG 2 cut(s) 1287, 1526
TaaI ACNGT 2 cut(s) 727, 916
TaiI ACGT 4 cut(s) 76, 395, 950, 1564
TaqI TCGA 6 cut(s) 41, 70, 352, 543, 1509, 1647
TasI AATT 8 cut(s) 82, 227, 294, 700, 759, 909, 1051, 1335
TatI WGTACW 3 cut(s) 448, 1179, 1200
TauI GCSGC 2 cut(s) 140, 1328
TfiI GAWTC 3 cut(s) 677, 849, 1092
Tru1I TTAA 6 cut(s) 396, 426, 461, 563, 1128, 1460
Tru9I TTAA 6 cut(s) 396, 426, 461, 563, 1128, 1460
TscAI CASTG 5 cut(s) 343, 730, 1197, 1309, 1410
TseFI GTSAC 1 cut(s) 1432
TseI GCWGC 2 cut(s) 301, 551
Tsp45I GTSAC 1 cut(s) 1432
TspMI CCCGGG 1 cut(s) 494
TspRI CASTG 5 cut(s) 343, 730, 1197, 1309, 1410
Van91I CCANNNNNTGG 1 cut(s) 1293
Vha464I CTTAAG 1 cut(s) 562
XapI RAATTY 3 cut(s) 294, 700, 1051
XceI RCATGY 2 cut(s) 631, 1207
XcmI CCANNNNNNNNNTGG 1 cut(s) 886
XhoI CTCGAG 1 cut(s) 542
XmaI CCCGGG 1 cut(s) 494
XmaJI CCTAGG 1 cut(s) 1526
XmiI GTMKAC 1 cut(s) 1342
XmnI GAANNNNTTC 1 cut(s) 1055
XspI CTAG 4 cut(s) 29, 959, 1527, 1566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.