Rh7CG421400

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000053
Physical Location & Seq
Reverse (-)
54414987 .. 54418553
3567 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG421400.1

Sequence Viewer

Length: 966 bp
ATGCTCCAGAAAATTCACAACTCTTCCTATGATGACCAAGAAAATAAGGATGATGATGAGCTTTACATAATAGCTCTACGTTTTCGATTGCTTAGACAACAAGGTTTTGAGGTTTCATGCAAGATGTTCAGCAAGTTCATCGACGTTGATGGAAAATTTAAGAGATCACTTGTCACTGATGTGGAAGGAATTTTAAAATTGTATGAAGCCACACATCTTAGGACACACGGAGAGGATATACTAGAAGCCGCCCTGGCCTTCACTACCACTCATCTTGAGTTGGCAGTAACTACTGCACAGGGTGGTCTAAGTCCACCACTTCTAAAACGAGTAACTCATGCCTTATACCAGCCACTGTGGAAGGGCTACCCAAGGCTAGAAGCAAGGCGCTACTTGTCTTTCTGCCGGGAACTAAAAAGTTCAGATATCAATGAAACACTCCTGACTTTTGCGAAGTTGGATTTCAATCAATTGCAGCGAGTCCATCAAGAAGAACTAAGTTATATCACAAGGCACTCTTGGACATCTACGTACGCTGATATTGAAAATGAGCTTGCGAATGAGGGGAAGTTGTATCGCATCCACTACGCCAGAGAATCATTCAAGTCAGATCTTGGTTTCAAGAAGCCAAATGGTTCCATGAGAAATACACTCCAACGTTGGATGAATATATGTCAGCCGCTAGCTCTTTCCACAACCTATTTCATGATGGCAACCACATCCTTTGTTTTAATGGCCGGAGATATTGTCACAAAAAATTCCTTGGGCTGGGTGTTCACCGACCCAAAGATGGTAAAGGCTTCATCAACAATAGGCAGACTCATGGATGACTTGCAATCCCACAAGATGGCGATGCCAAAGAGCAAACGATTTTCAAAACTTGGGCACCCACTTGGTATGCAAAGCCTATCAATCGAGTTTGGGCGCCCCTTCCGGATATACTTTTTTGGGCTTGCCCTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

321

Amino Acids

37.01

Weight (kDa)

9.15

Isoelectric Point (pI)

47.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 1 - 115 1.9e-36 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 175 - 285 1.1e-13 Terpene synthase family, metal binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 885, 924
AccB7I CCANNNNNTGG 1 cut(s) 847
AccIII TCCGGA 1 cut(s) 933
AciI CCGC 2 cut(s) 249, 680
AclI AACGTT 1 cut(s) 658
AcoI YGGCCR 1 cut(s) 735
AcsI RAATTY 4 cut(s) 12, 155, 189, 757
AcyI GRCGYC 1 cut(s) 925
AdeI CACNNNGTG 1 cut(s) 302
AfaI GTAC 1 cut(s) 533
AfiI CCNNNNNNNGG 3 cut(s) 768, 790, 847
AgsI TTSAA 5 cut(s) 466, 545, 604, 622, 876
AjnI CCWGG 1 cut(s) 252
AleI CACNNNNGTG 1 cut(s) 179
AluBI AGCT 4 cut(s) 61, 74, 553, 686
AluI AGCT 4 cut(s) 61, 74, 553, 686
AlwNI CAGNNNCTG 1 cut(s) 355
Aor13HI TCCGGA 1 cut(s) 933
AoxI GGCC 2 cut(s) 255, 735
ApeKI GCWGC 1 cut(s) 475
ApoI RAATTY 4 cut(s) 12, 155, 189, 757
AspLEI GCGC 2 cut(s) 390, 927
AsuC2I CCSGG 1 cut(s) 407
AsuHPI GGTGA 1 cut(s) 769
AsuNHI GCTAGC 1 cut(s) 682
BaeGI GKGCMC 1 cut(s) 888
BanI GGYRCC 2 cut(s) 885, 924
BbvI GCAGC 1 cut(s) 487
BccI CCATC 5 cut(s) 143, 492, 703, 784, 841
BcgI CGANNNNNNTGC 2 cut(s) 121, 155
BciT130I CCWGG 1 cut(s) 254
BcnI CCSGG 1 cut(s) 407
BfaI CTAG 3 cut(s) 242, 377, 683
BfoI RGCGCY 2 cut(s) 391, 928
BglI GCCNNNNNGGC 1 cut(s) 254
BglII AGATCT 1 cut(s) 610
BisI GCNGC 3 cut(s) 249, 476, 680
BlsI GCNGC 3 cut(s) 250, 477, 681
Bme1390I CCNGG 2 cut(s) 254, 407
BmiI GGNNCC 3 cut(s) 637, 887, 926
BmrFI CCNGG 2 cut(s) 254, 407
BmsI GCATC 2 cut(s) 588, 843
BmtI GCTAGC 1 cut(s) 686
BpuEI CTTGAG 1 cut(s) 296
BpuMI CCSGG 1 cut(s) 407
BsaAI YACGTR 1 cut(s) 531
BsaBI GATNNNNATC 1 cut(s) 465
BsaHI GRCGYC 1 cut(s) 925
BsaJI CCNNGG 3 cut(s) 252, 371, 762
BsaWI WCCGGW 1 cut(s) 933
BsaXI ACNNNNNCTCC 2 cut(s) 732, 762
Bsc4I CCNNNNNNNGG 3 cut(s) 768, 790, 847
Bse8I GATNNNNATC 1 cut(s) 465
BseAI TCCGGA 1 cut(s) 933
BseBI CCWGG 1 cut(s) 254
BseDI CCNNGG 3 cut(s) 252, 371, 762
BseGI GGATG 5 cut(s) 55, 579, 669, 719, 832
BseJI GATNNNNATC 1 cut(s) 465
BseLI CCNNNNNNNGG 3 cut(s) 768, 790, 847
BseSI GKGCMC 1 cut(s) 888
BseXI GCAGC 1 cut(s) 487
BseYI CCCAGC 1 cut(s) 768
BsgI GTGCAG 1 cut(s) 279
BshFI GGCC 2 cut(s) 257, 737
BshNI GGYRCC 2 cut(s) 885, 924
BsiSI CCGG 3 cut(s) 406, 738, 934
BsiWI CGTACG 1 cut(s) 531
BslI CCNNNNNNNGG 3 cut(s) 768, 790, 847
BsnI GGCC 2 cut(s) 257, 737
Bsp1286I GDGCHC 1 cut(s) 888
Bsp13I TCCGGA 1 cut(s) 933
Bsp143I GATC 2 cut(s) 164, 610
BspACI CCGC 2 cut(s) 249, 680
BspANI GGCC 2 cut(s) 257, 737
BspEI TCCGGA 1 cut(s) 933
BspHI TCATGA 1 cut(s) 705
BspLI GGNNCC 3 cut(s) 637, 887, 926
BspOI GCTAGC 1 cut(s) 686
BspT107I GGYRCC 2 cut(s) 885, 924
BssECI CCNNGG 3 cut(s) 252, 371, 762
BssMI GATC 2 cut(s) 164, 610
BssNI GRCGYC 1 cut(s) 925
BssT1I CCWWGG 2 cut(s) 371, 762
Bst2UI CCWGG 1 cut(s) 254
Bst4CI ACNGT 1 cut(s) 357
Bst6I CTCTTC 1 cut(s) 28
BstACI GRCGYC 1 cut(s) 925
BstBAI YACGTR 1 cut(s) 531
BstC8I GCNNGC 3 cut(s) 555, 684, 954
BstDEI CTNAG 4 cut(s) 92, 218, 308, 497
BstF5I GGATG 5 cut(s) 55, 579, 669, 719, 832
BstH2I RGCGCY 2 cut(s) 391, 928
BstHHI GCGC 2 cut(s) 390, 927
BstKTI GATC 2 cut(s) 167, 613
BstMBI GATC 2 cut(s) 164, 610
BstMWI GCNNNNNNNGC 1 cut(s) 254
BstNI CCWGG 1 cut(s) 254
BstSCI CCNGG 2 cut(s) 252, 405
BstSLI GKGCMC 1 cut(s) 888
BstSNI TACGTA 1 cut(s) 531
BstV1I GCAGC 1 cut(s) 487
BstX2I RGATCY 1 cut(s) 610
BstYI RGATCY 1 cut(s) 610
BsuRI GGCC 2 cut(s) 257, 737
BtgZI GCGATG 1 cut(s) 866
BtsCI GGATG 5 cut(s) 55, 579, 669, 719, 832
BtsIMutI CAGTG 2 cut(s) 174, 353
Cac8I GCNNGC 3 cut(s) 555, 684, 954
CaiI CAGNNNCTG 1 cut(s) 355
CciI TCATGA 1 cut(s) 705
CfoI GCGC 2 cut(s) 390, 927
Csp6I GTAC 1 cut(s) 532
CspCI CAANNNNNGTGG 4 cut(s) 256, 291, 706, 741
CviAII CATG 5 cut(s) 117, 338, 640, 706, 823
CviQI GTAC 1 cut(s) 532
DdeI CTNAG 4 cut(s) 92, 218, 308, 497
DinI GGCGCC 1 cut(s) 926
DpnI GATC 2 cut(s) 166, 612
DpnII GATC 2 cut(s) 164, 610
DraI TTTAAA 1 cut(s) 195
DraIII CACNNNGTG 1 cut(s) 302
EaeI YGGCCR 1 cut(s) 735
Eam1104I CTCTTC 1 cut(s) 28
EarI CTCTTC 1 cut(s) 28
Eco105I TACGTA 1 cut(s) 531
Eco130I CCWWGG 2 cut(s) 371, 762
Eco32I GATATC 1 cut(s) 427
EcoRII CCWGG 1 cut(s) 252
EcoRV GATATC 1 cut(s) 427
EcoT14I CCWWGG 2 cut(s) 371, 762
EgeI GGCGCC 1 cut(s) 926
EheI GGCGCC 1 cut(s) 926
ErhI CCWWGG 2 cut(s) 371, 762
FaeI CATG 5 cut(s) 120, 341, 643, 709, 826
FalI AAGNNNNNCTT 2 cut(s) 502, 534
FatI CATG 5 cut(s) 116, 337, 639, 705, 822
Fnu4HI GCNGC 3 cut(s) 249, 476, 680
FokI GGATG 5 cut(s) 62, 566, 676, 706, 839
Fsp4HI GCNGC 3 cut(s) 249, 476, 680
FspBI CTAG 3 cut(s) 242, 377, 683
GlaI GCGC 2 cut(s) 389, 926
GluI GCNGC 3 cut(s) 249, 476, 680
GsaI CCCAGC 1 cut(s) 772
HaeII RGCGCY 2 cut(s) 391, 928
HaeIII GGCC 2 cut(s) 257, 737
HapII CCGG 3 cut(s) 406, 738, 934
HhaI GCGC 2 cut(s) 390, 927
Hin1I GRCGYC 1 cut(s) 925
Hin1II CATG 5 cut(s) 120, 341, 643, 709, 826
Hin6I GCGC 2 cut(s) 388, 925
HinP1I GCGC 2 cut(s) 388, 925
HinfI GANTC 3 cut(s) 480, 596, 819
HpaII CCGG 3 cut(s) 406, 738, 934
HphI GGTGA 1 cut(s) 769
Hpy166II GTNNAC 2 cut(s) 314, 777
Hpy188I TCNGA 2 cut(s) 424, 610
Hpy188III TCNNGA 7 cut(s) 7, 275, 442, 488, 622, 706, 934
Hpy8I GTNNAC 2 cut(s) 314, 777
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 4 cut(s) 179, 268, 355, 940
HpyCH4III ACNGT 1 cut(s) 357
HpyCH4IV ACGT 4 cut(s) 79, 144, 530, 658
HpyCH4V TGCA 5 cut(s) 120, 296, 475, 835, 901
HpyF10VI GCNNNNNNNGC 1 cut(s) 254
HpyF3I CTNAG 4 cut(s) 92, 218, 308, 497
HpySE526I ACGT 4 cut(s) 79, 144, 530, 658
Hsp92I GRCGYC 1 cut(s) 925
Hsp92II CATG 5 cut(s) 120, 341, 643, 709, 826
HspAI GCGC 2 cut(s) 388, 925
KasI GGCGCC 1 cut(s) 924
Kpn2I TCCGGA 1 cut(s) 933
Kzo9I GATC 2 cut(s) 164, 610
LmnI GCTCC 1 cut(s) 9
Lsp1109I GCAGC 1 cut(s) 487
LweI GCATC 2 cut(s) 588, 843
MaeI CTAG 3 cut(s) 242, 377, 683
MaeII ACGT 4 cut(s) 79, 144, 530, 658
MaeIII GTNAC 4 cut(s) 172, 286, 331, 748
MalI GATC 2 cut(s) 166, 612
MboI GATC 2 cut(s) 164, 610
MboII GAAGA 2 cut(s) 15, 503
MfeI CAATTG 1 cut(s) 470
MflI RGATCY 1 cut(s) 610
MhlI GDGCHC 1 cut(s) 888
MluCI AATT 6 cut(s) 12, 155, 189, 197, 470, 757
Mly113I GGCGCC 1 cut(s) 925
MlyI GAGTC 2 cut(s) 489, 813
MmeI TCCRAC 3 cut(s) 438, 641, 679
MnlI CCTC 3 cut(s) 103, 226, 556
MroI TCCGGA 1 cut(s) 933
MseI TTAA 4 cut(s) 159, 194, 731, 964
MslI CAYNNNNRTG 1 cut(s) 179
MspI CCGG 3 cut(s) 406, 738, 934
MspR9I CCNGG 2 cut(s) 254, 407
MunI CAATTG 1 cut(s) 470
MvaI CCWGG 1 cut(s) 254
MwoI GCNNNNNNNGC 1 cut(s) 254
NarI GGCGCC 1 cut(s) 925
NciI CCSGG 1 cut(s) 407
NdeII GATC 2 cut(s) 164, 610
NheI GCTAGC 1 cut(s) 682
NlaIII CATG 5 cut(s) 120, 341, 643, 709, 826
NlaIV GGNNCC 3 cut(s) 637, 887, 926
NmuCI GTSAC 2 cut(s) 172, 748
OliI CACNNNNGTG 1 cut(s) 179
PagI TCATGA 1 cut(s) 705
PfeI GAWTC 1 cut(s) 596
Pfl23II CGTACG 1 cut(s) 531
PflMI CCANNNNNTGG 1 cut(s) 847
PkrI GCNGC 3 cut(s) 250, 477, 681
PleI GAGTC 2 cut(s) 488, 813
PluTI GGCGCC 1 cut(s) 928
PpsI GAGTC 2 cut(s) 488, 813
Ppu21I YACGTR 1 cut(s) 531
Psp1406I AACGTT 1 cut(s) 658
Psp6I CCWGG 1 cut(s) 252
PspFI CCCAGC 1 cut(s) 768
PspGI CCWGG 1 cut(s) 252
PspLI CGTACG 1 cut(s) 531
PspN4I GGNNCC 3 cut(s) 637, 887, 926
PstNI CAGNNNCTG 1 cut(s) 355
PsuI RGATCY 1 cut(s) 610
RsaI GTAC 1 cut(s) 533
RsaNI GTAC 1 cut(s) 532
RseI CAYNNNNRTG 1 cut(s) 179
SaqAI TTAA 4 cut(s) 159, 194, 731, 964
SatI GCNGC 3 cut(s) 249, 476, 680
Sau3AI GATC 2 cut(s) 164, 610
SchI GAGTC 2 cut(s) 489, 813
ScrFI CCNGG 2 cut(s) 254, 407
SduI GDGCHC 1 cut(s) 888
SfaNI GCATC 2 cut(s) 588, 843
SfoI GGCGCC 1 cut(s) 926
SmiMI CAYNNNNRTG 1 cut(s) 179
SmlI CTYRAG 1 cut(s) 275
SmoI CTYRAG 1 cut(s) 275
SnaBI TACGTA 1 cut(s) 531
Sse9I AATT 6 cut(s) 12, 155, 189, 197, 470, 757
SsiI CCGC 2 cut(s) 249, 680
SspDI GGCGCC 1 cut(s) 924
SspMI CTAG 3 cut(s) 242, 377, 683
StyD4I CCNGG 2 cut(s) 252, 405
StyI CCWWGG 2 cut(s) 371, 762
TaaI ACNGT 1 cut(s) 357
TaiI ACGT 4 cut(s) 82, 147, 533, 661
TaqI TCGA 3 cut(s) 85, 141, 915
TasI AATT 6 cut(s) 12, 155, 189, 197, 470, 757
TauI GCSGC 2 cut(s) 251, 682
TfiI GAWTC 1 cut(s) 596
Tru1I TTAA 4 cut(s) 159, 194, 731, 964
Tru9I TTAA 4 cut(s) 159, 194, 731, 964
TscAI CASTG 2 cut(s) 181, 360
TseFI GTSAC 2 cut(s) 172, 748
TseI GCWGC 1 cut(s) 475
Tsp45I GTSAC 2 cut(s) 172, 748
TspDTI ATGAA 7 cut(s) 105, 127, 219, 447, 680, 694, 792
TspGWI ACGGA 1 cut(s) 243
TspRI CASTG 2 cut(s) 181, 360
Van91I CCANNNNNTGG 1 cut(s) 847
XapI RAATTY 4 cut(s) 12, 155, 189, 757
XspI CTAG 3 cut(s) 242, 377, 683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.