Prupe.4G194500_v2.0.a1

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Forward (+)
11819823 .. 11822307
2485 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G194500.2

Sequence Viewer

Length: 1677 bp
ATGTCTGTCCAAGTTGGTTCAGCAGCTCAACCACAAAATGCTAAGCCAGATGAAATTGCTCGTAGGACAGCAAATTTTCACCCAAGCATTTGGGGAGATCAGTTCATCAATTATGATGATTCACAAGACATGATAACTCATGCTCATAAGCAAGGACAGGTTGACGAACTAAAAGAAGTTGTGAGGAGGGAAGTATTCACAACTAGTGCAGGTGATCTTTCACATCAGCTCAAGCTAATCGATGCAATCCAGCGCCTTGGCGTGGCATACCATTTCGAAACAGAAATAGAAGAAGCACTGGAACGCATACTTCATGACCATGACAGTGATGATGATGGTGATCTATACCATGTTGCTCTTTGTTTTCGACTACTCAGACAACATGGACATAATGTTTCATGTGATATATTCAACAAGTTCAAAGATGAAAATGGTAGCTTCAAGGAAAGCTTAATTGCTGATGTGTCTGGCATGCTAAGCTTTTATGAAGCAACACATCTGAGGGTGCATGGAGAAGATATACTAGAAGAGGCTCTTGCTTTCACCACCACTCATCTTGAGTCCGCAACAACCTGTGTAAGCAATCCATTGGCTGCACAAATAACTCAGGCCTTAGAGAGACCTCTGAGAAAAAGTCTAGAGAGATTAGGTGCCAGGCGTTACATGCCGATCTACCAAGACGAAGCTTCACATAATGAGTGCTTGTTGAAACTTGCCAAGTTAGATTTCAATCTTGTTCAGCCTTTACACAAAAAGGAGCTACAAGAGATTACTAGGTGGTGGAGAGCACTAGACTTTGAAAGGAAGCTGCCATTTGCAAGAGATAGGATGGTGGAGTTGTACTTTTGGATAGTGGGAGTGTATTTTGAGCCTCAGTATTCTGTGGGGAGAAAAATTATGACGAAAGTGAGTGTCTTGCTAACGATATTGGATGATATCTACGATGCATTTGGCACATTTGAAGAACTAGTGATCTTTACTGAAGCAATTGACAGGTGGGATCTCAATTGCAGTAATGAACTCCCTGACTACATGAAAATATTTTACCAGGCACTCTTGAATCTTTTCAATGAAATTGAGGAGGACATGGTCAAGGAAGGAAGATCATACCGAGTTCCTTATGCAATACAAGCTATGAAAGATCAAGCTAGATCCTATTTCAATGAGGCCCGGTGGCTCCAAGAAGGTCGAATTCCAAGCATGGAGGAGTATATGAGTGTTGCAACGGTTTCTATAAGTTACACCTTCCTTACAACCATCTCTTTACTTGGCATGGGAGATATTGTAACGAAGGAGTCATTTGAGTGGTTGCTCAATGACCCCAAAATTGTCAGGGCTGCAAACACCATTTTCAGGCTCATGGATGACATTGTTTCGACCAACTTTGAGAAAGAAAGAGGGCATGCTGCTTCCAGTGTTGATTGCTACATAAAGCAATATGGGGTCTCAGAGCAAGAGACCGTTGATGTTTTTAAGAAACAGATTATGGATTTGTGGAAGGACATAAACGAGGAGTTTCTCCGACCAACTGCTGTGCCGATGCCTGTGCTTAAGCGGGTTCTTAATTTAACACGAGTGGCTGATCTTCTTTACAAGGGGGAAGATGGCTTCACACGTGTTGGGAAGGTCACAAAAGATAGTATTGCTTCAGTCTGTATTAATCCTGTGCCGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

559

Amino Acids

64.34

Weight (kDa)

5.13

Isoelectric Point (pI)

44.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 200
Acc36I ACCTGC 1 cut(s) 200
AccB1I GGYRCC 1 cut(s) 650
AciI CCGC 3 cut(s) 564, 1555, 1670
AclWI GGATC 2 cut(s) 1008, 1146
AcsI RAATTY 2 cut(s) 73, 1191
AcuI CTGAAG 2 cut(s) 1002, 1632
AcvI CACGTG 1 cut(s) 1616
AfaI GTAC 1 cut(s) 842
AfiI CCNNNNNNNGG 2 cut(s) 262, 1353
AflII CTTAAG 1 cut(s) 1550
AflIII ACRYGT 2 cut(s) 1613, 1615
AhlI ACTAGT 2 cut(s) 203, 967
AjnI CCWGG 2 cut(s) 653, 1047
AjuI GAANNNNNNNTTGG 2 cut(s) 710, 742
Alw21I GWGCWC 1 cut(s) 790
Alw26I GTCTC 3 cut(s) 613, 1450, 1451
AlwI GGATC 2 cut(s) 1008, 1146
AoxI GGCC 2 cut(s) 609, 1167
ApeKI GCWGC 5 cut(s) 23, 593, 808, 1337, 1406
ApoI RAATTY 2 cut(s) 73, 1191
AseI ATTAAT 1 cut(s) 1659
Asp700I GAANNNNTTC 1 cut(s) 1064
AspLEI GCGC 1 cut(s) 255
AspS9I GGNCC 1 cut(s) 1168
AsuC2I CCSGG 1 cut(s) 1171
AsuHPI GGTGA 4 cut(s) 71, 224, 350, 535
AsuII TTCGAA 1 cut(s) 276
BanI GGYRCC 1 cut(s) 650
BauI CACGAG 1 cut(s) 1572
BbrPI CACGTG 1 cut(s) 1616
Bbv12I GWGCWC 1 cut(s) 790
BbvI GCAGC 5 cut(s) 35, 580, 795, 1324, 1393
BccI CCATC 4 cut(s) 329, 823, 1265, 1598
BcgI CGANNNNNNTGC 2 cut(s) 1528, 1562
BciT130I CCWGG 2 cut(s) 655, 1049
BcnI CCSGG 1 cut(s) 1171
BcoDI GTCTC 3 cut(s) 613, 1450, 1451
BcuI ACTAGT 2 cut(s) 203, 967
BfaI CTAG 7 cut(s) 204, 524, 638, 774, 791, 968, 1149
BfoI RGCGCY 1 cut(s) 256
BfrI CTTAAG 1 cut(s) 1550
BfuAI ACCTGC 1 cut(s) 200
BisI GCNGC 6 cut(s) 24, 594, 809, 1338, 1407, 1670
BlpI GCTNAGC 2 cut(s) 42, 476
BlsI GCNGC 6 cut(s) 25, 595, 810, 1339, 1408, 1671
Bme1390I CCNGG 3 cut(s) 655, 1049, 1171
BmgT120I GGNCC 1 cut(s) 1168
BmiI GGNNCC 2 cut(s) 652, 1178
BmrFI CCNGG 3 cut(s) 655, 1049, 1171
BmsI GCATC 3 cut(s) 232, 934, 1530
Bpu1102I GCTNAGC 2 cut(s) 42, 476
Bpu14I TTCGAA 1 cut(s) 276
BpuEI CTTGAG 2 cut(s) 215, 578
BpuMI CCSGG 1 cut(s) 1171
Bsa29I ATCGAT 1 cut(s) 240
BsaAI YACGTR 1 cut(s) 1616
BsaBI GATNNNNATC 2 cut(s) 339, 729
BsaI GGTCTC 3 cut(s) 613, 1450, 1451
BsaJI CCNNGG 1 cut(s) 256
BsaXI ACNNNNNCTCC 2 cut(s) 1269, 1299
Bsc4I CCNNNNNNNGG 2 cut(s) 262, 1353
Bse1I ACTGG 2 cut(s) 303, 1413
Bse8I GATNNNNATC 2 cut(s) 339, 729
BseBI CCWGG 2 cut(s) 655, 1049
BseCI ATCGAT 1 cut(s) 240
BseDI CCNNGG 1 cut(s) 256
BseGI GGATG 3 cut(s) 834, 937, 1369
BseJI GATNNNNATC 2 cut(s) 339, 729
BseLI CCNNNNNNNGG 2 cut(s) 262, 1353
BseMII CTCAG 6 cut(s) 388, 491, 617, 620, 887, 1461
BseNI ACTGG 2 cut(s) 303, 1413
BseRI GAGGAG 4 cut(s) 199, 1094, 1220, 1526
BseXI GCAGC 5 cut(s) 35, 580, 795, 1324, 1393
BsgI GTGCAG 2 cut(s) 228, 579
BshFI GGCC 2 cut(s) 611, 1169
BshNI GGYRCC 1 cut(s) 650
BshVI ATCGAT 1 cut(s) 240
BsiHKAI GWGCWC 1 cut(s) 790
BsiSI CCGG 1 cut(s) 1171
BslI CCNNNNNNNGG 2 cut(s) 262, 1353
BsmAI GTCTC 3 cut(s) 613, 1450, 1451
BsnI GGCC 2 cut(s) 611, 1169
Bso31I GGTCTC 3 cut(s) 613, 1450, 1451
Bsp119I TTCGAA 1 cut(s) 276
Bsp1286I GDGCHC 1 cut(s) 790
Bsp1720I GCTNAGC 2 cut(s) 42, 476
BspACI CCGC 3 cut(s) 564, 1555, 1670
BspANI GGCC 2 cut(s) 611, 1169
BspCNI CTCAG 6 cut(s) 387, 492, 618, 619, 886, 1460
BspDI ATCGAT 1 cut(s) 240
BspHI TCATGA 1 cut(s) 313
BspLI GGNNCC 2 cut(s) 652, 1178
BspMI ACCTGC 1 cut(s) 200
BspPI GGATC 2 cut(s) 1008, 1146
BspT104I TTCGAA 1 cut(s) 276
BspT107I GGYRCC 1 cut(s) 650
BspTI CTTAAG 1 cut(s) 1550
BspTNI GGTCTC 3 cut(s) 613, 1450, 1451
BsrI ACTGG 2 cut(s) 303, 1413
BssECI CCNNGG 1 cut(s) 256
BssSI CACGAG 1 cut(s) 1572
BssT1I CCWWGG 1 cut(s) 256
Bst2BI CACGAG 1 cut(s) 1572
Bst2UI CCWGG 2 cut(s) 655, 1049
Bst4CI ACNGT 3 cut(s) 326, 1228, 1462
Bst6I CTCTTC 1 cut(s) 522
BstAFI CTTAAG 1 cut(s) 1550
BstBAI YACGTR 1 cut(s) 1616
BstBI TTCGAA 1 cut(s) 276
BstC8I GCNNGC 2 cut(s) 473, 1404
BstDEI CTNAG 9 cut(s) 42, 374, 476, 500, 606, 613, 626, 873, 1447
BstF5I GGATG 3 cut(s) 834, 937, 1369
BstH2I RGCGCY 1 cut(s) 256
BstHHI GCGC 1 cut(s) 255
BstMAI GTCTC 3 cut(s) 613, 1450, 1451
BstMWI GCNNNNNNNGC 3 cut(s) 477, 664, 1130
BstNI CCWGG 2 cut(s) 655, 1049
BstNSI RCATGY 3 cut(s) 475, 667, 1406
BstSCI CCNGG 3 cut(s) 653, 1047, 1169
BstV1I GCAGC 5 cut(s) 35, 580, 795, 1324, 1393
BstX2I RGATCY 2 cut(s) 1000, 1151
BstXI CCANNNNNNTGG 2 cut(s) 90, 257
BstYI RGATCY 2 cut(s) 1000, 1151
Bsu15I ATCGAT 1 cut(s) 240
BsuRI GGCC 2 cut(s) 611, 1169
BsuTUI ATCGAT 1 cut(s) 240
BtsCI GGATG 3 cut(s) 834, 937, 1369
BtsIMutI CAGTG 3 cut(s) 296, 331, 1420
BveI ACCTGC 1 cut(s) 200
Cac8I GCNNGC 2 cut(s) 473, 1404
CciI TCATGA 1 cut(s) 313
CfoI GCGC 1 cut(s) 255
Cfr13I GGNCC 1 cut(s) 1168
ClaI ATCGAT 1 cut(s) 240
Csp6I GTAC 1 cut(s) 841
CspCI CAANNNNNGTGG 2 cut(s) 538, 573
CviQI GTAC 1 cut(s) 841
DdeI CTNAG 9 cut(s) 42, 374, 476, 500, 606, 613, 626, 873, 1447
Eam1104I CTCTTC 1 cut(s) 522
EarI CTCTTC 1 cut(s) 522
Eco130I CCWWGG 1 cut(s) 256
Eco147I AGGCCT 1 cut(s) 611
Eco31I GGTCTC 3 cut(s) 613, 1450, 1451
Eco32I GATATC 1 cut(s) 937
Eco57I CTGAAG 2 cut(s) 1002, 1632
Eco72I CACGTG 1 cut(s) 1616
EcoRI GAATTC 1 cut(s) 1191
EcoRII CCWGG 2 cut(s) 653, 1047
EcoRV GATATC 1 cut(s) 937
EcoT14I CCWWGG 1 cut(s) 256
EcoT22I ATGCAT 1 cut(s) 949
ErhI CCWWGG 1 cut(s) 256
FalI AAGNNNNNCTT 4 cut(s) 434, 466, 519, 551
FauI CCCGC 1 cut(s) 1548
Fnu4HI GCNGC 6 cut(s) 24, 594, 809, 1338, 1407, 1670
FokI GGATG 3 cut(s) 841, 944, 1376
Fsp4HI GCNGC 6 cut(s) 24, 594, 809, 1338, 1407, 1670
FspBI CTAG 7 cut(s) 204, 524, 638, 774, 791, 968, 1149
GlaI GCGC 1 cut(s) 254
GluI GCNGC 6 cut(s) 24, 594, 809, 1338, 1407, 1670
HaeII RGCGCY 1 cut(s) 256
HaeIII GGCC 2 cut(s) 611, 1169
HapII CCGG 1 cut(s) 1171
HhaI GCGC 1 cut(s) 255
Hin6I GCGC 1 cut(s) 253
HinP1I GCGC 1 cut(s) 253
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HindIII AAGCTT 3 cut(s) 448, 478, 684
HinfI GANTC 4 cut(s) 119, 560, 1060, 1295
HpaII CCGG 1 cut(s) 1171
HphI GGTGA 4 cut(s) 71, 224, 350, 535
Hpy166II GTNNAC 1 cut(s) 163
Hpy188I TCNGA 5 cut(s) 377, 501, 627, 1450, 1523
Hpy188III TCNNGA 4 cut(s) 314, 557, 638, 1057
Hpy8I GTNNAC 1 cut(s) 163
HpyAV CCTTC 6 cut(s) 1091, 1178, 1255, 1285, 1492, 1618
HpyCH4III ACNGT 3 cut(s) 326, 1228, 1462
HpyCH4IV ACGT 1 cut(s) 1615
HpyF10VI GCNNNNNNNGC 3 cut(s) 477, 664, 1130
HpyF3I CTNAG 9 cut(s) 42, 374, 476, 500, 606, 613, 626, 873, 1447
HpySE526I ACGT 1 cut(s) 1615
HspAI GCGC 1 cut(s) 253
LmnI GCTCC 2 cut(s) 757, 1182
Lsp1109I GCAGC 5 cut(s) 35, 580, 795, 1324, 1393
LweI GCATC 3 cut(s) 232, 934, 1530
MaeI CTAG 7 cut(s) 204, 524, 638, 774, 791, 968, 1149
MaeII ACGT 1 cut(s) 1615
MaeIII GTNAC 4 cut(s) 659, 1238, 1285, 1627
MboII GAAGA 7 cut(s) 302, 527, 539, 974, 1113, 1577, 1613
MfeI CAATTG 2 cut(s) 987, 1006
MflI RGATCY 2 cut(s) 1000, 1151
MhlI GDGCHC 1 cut(s) 790
MlyI GAGTC 2 cut(s) 569, 1304
MmeI TCCRAC 1 cut(s) 1546
Mph1103I ATGCAT 1 cut(s) 949
MroXI GAANNNNTTC 1 cut(s) 1064
MseI TTAA 6 cut(s) 452, 1473, 1551, 1563, 1568, 1659
MslI CAYNNNNRTG 3 cut(s) 318, 324, 1303
MspCI CTTAAG 1 cut(s) 1550
MspI CCGG 1 cut(s) 1171
MspR9I CCNGG 3 cut(s) 655, 1049, 1171
MunI CAATTG 2 cut(s) 987, 1006
MvaI CCWGG 2 cut(s) 655, 1049
MwoI GCNNNNNNNGC 3 cut(s) 477, 664, 1130
NciI CCSGG 1 cut(s) 1171
NlaIV GGNNCC 2 cut(s) 652, 1178
NmuCI GTSAC 1 cut(s) 1627
NsiI ATGCAT 1 cut(s) 949
NspI RCATGY 3 cut(s) 475, 667, 1406
NspV TTCGAA 1 cut(s) 276
PaeI GCATGC 2 cut(s) 475, 1406
PagI TCATGA 1 cut(s) 313
PaqCI CACCTGC 1 cut(s) 200
PceI AGGCCT 1 cut(s) 611
PdmI GAANNNNTTC 1 cut(s) 1064
PfeI GAWTC 2 cut(s) 119, 1060
PflFI GACNNNGTC 1 cut(s) 1088
PkrI GCNGC 6 cut(s) 25, 595, 810, 1339, 1408, 1671
PleI GAGTC 2 cut(s) 568, 1303
PmaCI CACGTG 1 cut(s) 1616
PmlI CACGTG 1 cut(s) 1616
PpsI GAGTC 2 cut(s) 568, 1303
Ppu21I YACGTR 1 cut(s) 1616
PshBI ATTAAT 1 cut(s) 1659
Psp6I CCWGG 2 cut(s) 653, 1047
PspCI CACGTG 1 cut(s) 1616
PspGI CCWGG 2 cut(s) 653, 1047
PspN4I GGNNCC 2 cut(s) 652, 1178
PspPI GGNCC 1 cut(s) 1168
PsuI RGATCY 2 cut(s) 1000, 1151
PsyI GACNNNGTC 1 cut(s) 1088
RsaI GTAC 1 cut(s) 842
RsaNI GTAC 1 cut(s) 841
RseI CAYNNNNRTG 3 cut(s) 318, 324, 1303
SaqAI TTAA 6 cut(s) 452, 1473, 1551, 1563, 1568, 1659
SatI GCNGC 6 cut(s) 24, 594, 809, 1338, 1407, 1670
Sau96I GGNCC 1 cut(s) 1168
SchI GAGTC 2 cut(s) 569, 1304
ScrFI CCNGG 3 cut(s) 655, 1049, 1171
SduI GDGCHC 1 cut(s) 790
SfaNI GCATC 3 cut(s) 232, 934, 1530
SfuI TTCGAA 1 cut(s) 276
SmiMI CAYNNNNRTG 3 cut(s) 318, 324, 1303
SmlI CTYRAG 3 cut(s) 230, 557, 1550
SmoI CTYRAG 3 cut(s) 230, 557, 1550
SpeI ACTAGT 2 cut(s) 203, 967
SphI GCATGC 2 cut(s) 475, 1406
SseBI AGGCCT 1 cut(s) 611
SsiI CCGC 3 cut(s) 564, 1555, 1670
SspI AATATT 1 cut(s) 1041
SspMI CTAG 7 cut(s) 204, 524, 638, 774, 791, 968, 1149
StuI AGGCCT 1 cut(s) 611
StyD4I CCNGG 3 cut(s) 653, 1047, 1169
StyI CCWWGG 1 cut(s) 256
TaaI ACNGT 3 cut(s) 326, 1228, 1462
TaiI ACGT 1 cut(s) 1618
TaqI TCGA 5 cut(s) 240, 276, 367, 1189, 1376
TatI WGTACW 1 cut(s) 840
TauI GCSGC 1 cut(s) 1672
TfiI GAWTC 2 cut(s) 119, 1060
Tru1I TTAA 6 cut(s) 452, 1473, 1551, 1563, 1568, 1659
Tru9I TTAA 6 cut(s) 452, 1473, 1551, 1563, 1568, 1659
TscAI CASTG 3 cut(s) 303, 331, 1420
TseFI GTSAC 1 cut(s) 1627
TseI GCWGC 5 cut(s) 23, 593, 808, 1337, 1406
Tsp45I GTSAC 1 cut(s) 1627
TspRI CASTG 3 cut(s) 303, 331, 1420
Tth111I GACNNNGTC 1 cut(s) 1088
Vha464I CTTAAG 1 cut(s) 1550
VspI ATTAAT 1 cut(s) 1659
XapI RAATTY 2 cut(s) 73, 1191
XbaI TCTAGA 1 cut(s) 637
XceI RCATGY 3 cut(s) 475, 667, 1406
XmnI GAANNNNTTC 1 cut(s) 1064
XspI CTAG 7 cut(s) 204, 524, 638, 774, 791, 968, 1149
Zsp2I ATGCAT 1 cut(s) 949
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.