RchiOBHm_Chr1g0326351

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000053
Physical Location & Seq
Reverse (-)
14783402 .. 14785360
1959 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55599

Sequence Viewer

Length: 1314 bp
ATGTTCCCTGCTTTAGCGTCTGACCTAGCTCAAACCCCGAATATTACTGCCACTCCTGATGTTACTCAATGTTCAGCTAATTTTTCCCCGAGTATTTGGGGTGATCATTTTCTGTCATATGCTTCCATGGAAGCGGCAGATAGTAAAAGTAAGAAACATGTCCAAGACTTGAAGGAAGAACTGAAGAGGATGATAATGGCTCCAACGAAAAGGCCTTCACAAAAGTTGCACTTCATCAACCACATTCAGCGCTTAGGTGTCTCATACCATTTCGAAGATGAGATTGACCAAATTTTGCAGCAAGTTCACCGAGAAGAAGAATATGATGATCTTTGCACCACTGCTCTAAGCTTTCGATTGCTTAGACAACATGGTTATAACGCTTCATGCAATATGTTTAACAAGTTCAAGGATGGTGATGGGAAATTTAAAGAATCGCTTGTTAATGATGTAGTCGGCCTGTTAAGCTTGTATGAAGCCTCGCATCTTCAGATGCCTGGGGAGGATTTACTAAACGAGGCACTAACCTTCTCCACCGCTCATCTCATGTCTGCAGCACACCATTTAAGCTCATCATCTCAGCTTTCAAAACAAGTAACTCATGCCTTGTATCAGCCCCTTTGGAAGGGCATGCCAAGGATTGAAGCGAGGCATCACTTGTCTATTTACCAAGAAGATGATGCGCATAATGAAACTCTCCTGAATTTTGCAAAGTTCGATTTTAACACTGTGCAGAAACTTTCTTCTGTTCTCTCTGTTTCTCTTTATGGTATCAGAGGCCATTTGCTTCATCGCCTAATCCCTTCGTCTTCCACCTTCCTCTTTCTCCAAACCCTAACCATGGCGACCTCTACATCATCCTCTCCTCCTAGTTCGACCTTCCCTCTGGTTCAGGCTTCTTCGTCGTCGATGCAGGTCCAAAATCTCGGTCCGGTCATTCCTGTTCGTCTCACCGAGACTAACTATTTGCTCTGGAAATCGGTATTTCTTCCAGTGCTTCACAAGTATCGTCTCCTCTCCATCGTCGACGGCTCTGAACCATGTCCACCAGAGAAGGTTCTTTCTTCCTCCGGCGATCTCGTTCCGAACGATGCTTTCATCTCTTGGTTTGAGCGTGACCAGCAGCTCCTCATCTGGATCAACTCCACACTCTCCGATTCCGTCTTGCCTTACGTCATCGGCTACACTCATGCTCGTGATCTCTGGCTCAACCTCGAAGCTCGTTTCGCCGGACTTTCTCAGGCTCATCTTCTCCATCTGAAATCTAAGCTTCAATCGGCCAAGAAAGTCTTGCTGCTCTCGGAGCTCCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

437

Amino Acids

49.23

Weight (kDa)

6.49

Isoelectric Point (pI)

48.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 32 - 203 2.3e-58 Terpene synthase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 378
Acc16I TGCGCA 1 cut(s) 684
Acc36I ACCTGC 1 cut(s) 904
AccBSI CCGCTC 1 cut(s) 539
AccI GTMKAC 1 cut(s) 1026
AciI CCGC 2 cut(s) 134, 537
AclWI GGATC 1 cut(s) 1145
AcoI YGGCCR 1 cut(s) 1278
AcsI RAATTY 3 cut(s) 291, 425, 703
AcuI CTGAAG 2 cut(s) 203, 473
AfeI AGCGCT 1 cut(s) 251
AfiI CCNNNNNNNGG 2 cut(s) 625, 841
AflIII ACRYGT 1 cut(s) 157
AgsI TTSAA 5 cut(s) 172, 409, 588, 644, 1274
AjnI CCWGG 1 cut(s) 496
Alw21I GWGCWC 1 cut(s) 1308
Alw26I GTCTC 4 cut(s) 265, 950, 953, 1016
AlwI GGATC 1 cut(s) 1145
Ama87I CYCGRG 1 cut(s) 88
Aor51HI AGCGCT 1 cut(s) 251
AoxI GGCC 4 cut(s) 212, 457, 778, 1278
ApeKI GCWGC 4 cut(s) 298, 554, 1123, 1294
ApoI RAATTY 3 cut(s) 291, 425, 703
ArsI GACNNNNNNTTYG 4 cut(s) 913, 945, 949, 981
AspLEI GCGC 2 cut(s) 252, 685
AspS9I GGNCC 2 cut(s) 916, 929
AsuHPI GGTGA 4 cut(s) 113, 299, 428, 943
AsuII TTCGAA 1 cut(s) 273
AvaI CYCGRG 1 cut(s) 88
AvaII GGWCC 2 cut(s) 916, 929
BanII GRGCYC 1 cut(s) 1308
BauI CACGAG 1 cut(s) 1194
BbsI GAAGAC 1 cut(s) 801
Bbv12I GWGCWC 1 cut(s) 1308
BbvI GCAGC 4 cut(s) 310, 566, 1135, 1281
BccI CCATC 4 cut(s) 407, 413, 1028, 1263
BceAI ACGGC 1 cut(s) 1045
BciT130I CCWGG 1 cut(s) 498
BclI TGATCA 1 cut(s) 103
BcoDI GTCTC 4 cut(s) 265, 950, 953, 1016
BfaI CTAG 2 cut(s) 26, 870
BfmI CTRYAG 1 cut(s) 552
BfoI RGCGCY 1 cut(s) 253
BfuAI ACCTGC 1 cut(s) 904
BisI GCNGC 5 cut(s) 135, 299, 555, 1124, 1295
BlsI GCNGC 5 cut(s) 136, 300, 556, 1125, 1296
Bme1390I CCNGG 1 cut(s) 498
Bme18I GGWCC 2 cut(s) 916, 929
BmeT110I CYCGRG 1 cut(s) 88
BmgT120I GGNCC 2 cut(s) 916, 929
BmiI GGNNCC 1 cut(s) 201
BmrFI CCNGG 1 cut(s) 498
BmsI GCATC 6 cut(s) 483, 493, 661, 670, 900, 1081
BpiI GAAGAC 1 cut(s) 801
Bpu10I CCTNAGC 1 cut(s) 253
Bpu14I TTCGAA 1 cut(s) 273
BsaJI CCNNGG 4 cut(s) 126, 497, 635, 840
BsaWI WCCGGW 2 cut(s) 931, 1308
BsaXI ACNNNNNCTCC 3 cut(s) 37, 67, 1295
Bsc4I CCNNNNNNNGG 2 cut(s) 625, 841
Bse1I ACTGG 1 cut(s) 992
BseBI CCWGG 1 cut(s) 498
BseDI CCNNGG 4 cut(s) 126, 497, 635, 840
BseGI GGATG 3 cut(s) 195, 418, 857
BseLI CCNNNNNNNGG 2 cut(s) 625, 841
BseMII CTCAG 2 cut(s) 593, 1253
BseNI ACTGG 1 cut(s) 992
BseRI GAGGAG 3 cut(s) 855, 1004, 1118
BseXI GCAGC 4 cut(s) 310, 566, 1135, 1281
BsgI GTGCAG 1 cut(s) 752
BshFI GGCC 4 cut(s) 214, 459, 780, 1280
BsiHKAI GWGCWC 1 cut(s) 1308
BsiHKCI CYCGRG 1 cut(s) 88
BsiSI CCGG 4 cut(s) 932, 1071, 1230, 1309
BslI CCNNNNNNNGG 2 cut(s) 625, 841
BsmAI GTCTC 4 cut(s) 265, 950, 953, 1016
BsmBI CGTCTC 2 cut(s) 953, 1016
BsnI GGCC 4 cut(s) 214, 459, 780, 1280
BsoBI CYCGRG 1 cut(s) 88
Bsp119I TTCGAA 1 cut(s) 273
Bsp1286I GDGCHC 1 cut(s) 1308
Bsp143I GATC 5 cut(s) 103, 328, 1075, 1137, 1198
Bsp19I CCATGG 2 cut(s) 126, 840
BspACI CCGC 2 cut(s) 134, 537
BspANI GGCC 4 cut(s) 214, 459, 780, 1280
BspCNI CTCAG 2 cut(s) 592, 1252
BspLI GGNNCC 1 cut(s) 201
BspMAI CTGCAG 1 cut(s) 556
BspMI ACCTGC 1 cut(s) 904
BspPI GGATC 1 cut(s) 1145
BspT104I TTCGAA 1 cut(s) 273
BsrBI CCGCTC 1 cut(s) 539
BsrI ACTGG 1 cut(s) 992
BssECI CCNNGG 4 cut(s) 126, 497, 635, 840
BssMI GATC 5 cut(s) 103, 328, 1075, 1137, 1198
BssSI CACGAG 1 cut(s) 1194
BssT1I CCWWGG 3 cut(s) 126, 635, 840
Bst2BI CACGAG 1 cut(s) 1194
Bst2UI CCWGG 1 cut(s) 498
Bst4CI ACNGT 1 cut(s) 730
Bst6I CTCTTC 1 cut(s) 179
BstBI TTCGAA 1 cut(s) 273
BstC8I GCNNGC 1 cut(s) 632
BstDEI CTNAG 6 cut(s) 253, 347, 362, 579, 1239, 1266
BstDSI CCRYGG 2 cut(s) 126, 840
BstENI CCTNNNNNAGG 1 cut(s) 623
BstF5I GGATG 3 cut(s) 195, 418, 857
BstH2I RGCGCY 1 cut(s) 253
BstHHI GCGC 2 cut(s) 252, 685
BstKTI GATC 5 cut(s) 106, 331, 1078, 1140, 1201
BstMAI GTCTC 4 cut(s) 265, 950, 953, 1016
BstMBI GATC 5 cut(s) 103, 328, 1075, 1137, 1198
BstMWI GCNNNNNNNGC 4 cut(s) 465, 1120, 1226, 1303
BstNI CCWGG 1 cut(s) 498
BstNSI RCATGY 2 cut(s) 161, 634
BstSCI CCNGG 1 cut(s) 496
BstSFI CTRYAG 1 cut(s) 552
BstV1I GCAGC 4 cut(s) 310, 566, 1135, 1281
BstV2I GAAGAC 1 cut(s) 801
BsuRI GGCC 4 cut(s) 214, 459, 780, 1280
BtgI CCRYGG 2 cut(s) 126, 840
BtgZI GCGATG 1 cut(s) 776
BtsCI GGATG 3 cut(s) 195, 418, 857
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 3 cut(s) 339, 726, 999
BveI ACCTGC 1 cut(s) 904
Cac8I GCNNGC 1 cut(s) 632
CfoI GCGC 2 cut(s) 252, 685
Cfr13I GGNCC 2 cut(s) 916, 929
CpoI CGGWCCG 1 cut(s) 929
CseI GACGC 1 cut(s) 6
CspI CGGWCCG 1 cut(s) 929
DdeI CTNAG 6 cut(s) 253, 347, 362, 579, 1239, 1266
DpnI GATC 5 cut(s) 105, 330, 1077, 1139, 1200
DpnII GATC 5 cut(s) 103, 328, 1075, 1137, 1198
DraI TTTAAA 1 cut(s) 430
EaeI YGGCCR 1 cut(s) 1278
Eam1104I CTCTTC 1 cut(s) 179
EarI CTCTTC 1 cut(s) 179
Ecl136II GAGCTC 1 cut(s) 1306
Eco130I CCWWGG 3 cut(s) 126, 635, 840
Eco147I AGGCCT 1 cut(s) 214
Eco24I GRGCYC 1 cut(s) 1308
Eco47I GGWCC 2 cut(s) 916, 929
Eco47III AGCGCT 1 cut(s) 251
Eco53kI GAGCTC 1 cut(s) 1306
Eco57I CTGAAG 2 cut(s) 203, 473
Eco88I CYCGRG 1 cut(s) 88
EcoICRI GAGCTC 1 cut(s) 1306
EcoNI CCTNNNNNAGG 1 cut(s) 623
EcoRII CCWGG 1 cut(s) 496
EcoT14I CCWWGG 3 cut(s) 126, 635, 840
EcoT38I GRGCYC 1 cut(s) 1308
ErhI CCWWGG 3 cut(s) 126, 635, 840
Esp3I CGTCTC 2 cut(s) 953, 1016
FalI AAGNNNNNCTT 6 cut(s) 215, 247, 423, 455, 1274, 1306
FauNDI CATATG 1 cut(s) 118
FbaI TGATCA 1 cut(s) 103
FblI GTMKAC 1 cut(s) 1026
Fnu4HI GCNGC 5 cut(s) 135, 299, 555, 1124, 1295
FokI GGATG 3 cut(s) 202, 425, 844
FriOI GRGCYC 1 cut(s) 1308
Fsp4HI GCNGC 5 cut(s) 135, 299, 555, 1124, 1295
FspAI RTGCGCAY 1 cut(s) 684
FspBI CTAG 2 cut(s) 26, 870
FspI TGCGCA 1 cut(s) 684
GlaI GCGC 2 cut(s) 251, 684
GluI GCNGC 5 cut(s) 135, 299, 555, 1124, 1295
HaeII RGCGCY 1 cut(s) 253
HaeIII GGCC 4 cut(s) 214, 459, 780, 1280
HapII CCGG 4 cut(s) 932, 1071, 1230, 1309
HgaI GACGC 1 cut(s) 6
HhaI GCGC 2 cut(s) 252, 685
Hin6I GCGC 2 cut(s) 250, 683
HinP1I GCGC 2 cut(s) 250, 683
HincII GTYRAC 1 cut(s) 1027
HindII GTYRAC 1 cut(s) 1027
HindIII AAGCTT 3 cut(s) 349, 466, 1268
HinfI GANTC 2 cut(s) 434, 1157
HpaII CCGG 4 cut(s) 932, 1071, 1230, 1309
HphI GGTGA 4 cut(s) 113, 299, 428, 943
Hpy166II GTNNAC 3 cut(s) 307, 1027, 1046
Hpy188I TCNGA 8 cut(s) 22, 492, 776, 1036, 1086, 1156, 1260, 1303
Hpy188III TCNNGA 5 cut(s) 56, 700, 973, 1135, 1196
Hpy8I GTNNAC 3 cut(s) 307, 1027, 1046
Hpy99I CGWCG 4 cut(s) 907, 910, 1028, 1031
HpyAV CCTTC 8 cut(s) 166, 225, 538, 619, 813, 826, 889, 1048
HpyCH4III ACNGT 1 cut(s) 730
HpyCH4IV ACGT 1 cut(s) 1173
HpyCH4V TGCA 8 cut(s) 229, 298, 336, 390, 554, 710, 733, 913
HpyF10VI GCNNNNNNNGC 4 cut(s) 465, 1120, 1226, 1303
HpyF3I CTNAG 6 cut(s) 253, 347, 362, 579, 1239, 1266
HpySE526I ACGT 1 cut(s) 1173
HspAI GCGC 2 cut(s) 250, 683
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 5 cut(s) 103, 328, 1075, 1137, 1198
LmnI GCTCC 4 cut(s) 205, 1131, 1303, 1311
Lsp1109I GCAGC 4 cut(s) 310, 566, 1135, 1281
LweI GCATC 6 cut(s) 483, 493, 661, 670, 900, 1081
MaeI CTAG 2 cut(s) 26, 870
MaeII ACGT 1 cut(s) 1173
MaeIII GTNAC 3 cut(s) 61, 595, 1115
MalI GATC 5 cut(s) 105, 330, 1077, 1139, 1200
MbiI CCGCTC 1 cut(s) 539
MboI GATC 5 cut(s) 103, 328, 1075, 1137, 1198
MhlI GDGCHC 1 cut(s) 1308
MluCI AATT 4 cut(s) 79, 291, 425, 703
MmeI TCCRAC 1 cut(s) 227
MseI TTAA 6 cut(s) 399, 429, 444, 464, 566, 723
MslI CAYNNNNRTG 1 cut(s) 1194
MspI CCGG 4 cut(s) 932, 1071, 1230, 1309
MspR9I CCNGG 1 cut(s) 498
MvaI CCWGG 1 cut(s) 498
MwoI GCNNNNNNNGC 4 cut(s) 465, 1120, 1226, 1303
NcoI CCATGG 2 cut(s) 126, 840
NdeI CATATG 1 cut(s) 118
NdeII GATC 5 cut(s) 103, 328, 1075, 1137, 1198
NlaIV GGNNCC 1 cut(s) 201
NmuCI GTSAC 1 cut(s) 1115
NsbI TGCGCA 1 cut(s) 684
NspI RCATGY 2 cut(s) 161, 634
NspV TTCGAA 1 cut(s) 273
PaeI GCATGC 1 cut(s) 634
PceI AGGCCT 1 cut(s) 214
PciI ACATGT 1 cut(s) 157
PcsI WCGNNNNNNNCGW 1 cut(s) 1086
PfeI GAWTC 2 cut(s) 434, 1157
PkrI GCNGC 5 cut(s) 136, 300, 556, 1125, 1296
PscI ACATGT 1 cut(s) 157
PsiI TTATAA 1 cut(s) 378
Psp124BI GAGCTC 1 cut(s) 1308
Psp6I CCWGG 1 cut(s) 496
PspGI CCWGG 1 cut(s) 496
PspN4I GGNNCC 1 cut(s) 201
PspPI GGNCC 2 cut(s) 916, 929
PstI CTGCAG 1 cut(s) 556
RseI CAYNNNNRTG 1 cut(s) 1194
Rsr2I CGGWCCG 1 cut(s) 929
RsrII CGGWCCG 1 cut(s) 929
SacI GAGCTC 1 cut(s) 1308
SalI GTCGAC 1 cut(s) 1025
SaqAI TTAA 6 cut(s) 399, 429, 444, 464, 566, 723
SatI GCNGC 5 cut(s) 135, 299, 555, 1124, 1295
Sau3AI GATC 5 cut(s) 103, 328, 1075, 1137, 1198
Sau96I GGNCC 2 cut(s) 916, 929
ScrFI CCNGG 1 cut(s) 498
SduI GDGCHC 1 cut(s) 1308
SfaNI GCATC 6 cut(s) 483, 493, 661, 670, 900, 1081
SfcI CTRYAG 1 cut(s) 552
SfuI TTCGAA 1 cut(s) 273
SgrDI CGTCGACG 1 cut(s) 1025
SinI GGWCC 2 cut(s) 916, 929
SmiMI CAYNNNNRTG 1 cut(s) 1194
SphI GCATGC 1 cut(s) 634
Sse9I AATT 4 cut(s) 79, 291, 425, 703
SseBI AGGCCT 1 cut(s) 214
SsiI CCGC 2 cut(s) 134, 537
SspI AATATT 1 cut(s) 43
SspMI CTAG 2 cut(s) 26, 870
SstI GAGCTC 1 cut(s) 1308
StuI AGGCCT 1 cut(s) 214
StyD4I CCNGG 1 cut(s) 496
StyI CCWWGG 3 cut(s) 126, 635, 840
TaaI ACNGT 1 cut(s) 730
TaiI ACGT 1 cut(s) 1176
TaqI TCGA 7 cut(s) 273, 355, 717, 875, 908, 1026, 1215
TaqII GACCGA 1 cut(s) 917
TasI AATT 4 cut(s) 79, 291, 425, 703
TauI GCSGC 1 cut(s) 137
TfiI GAWTC 2 cut(s) 434, 1157
Tru1I TTAA 6 cut(s) 399, 429, 444, 464, 566, 723
Tru9I TTAA 6 cut(s) 399, 429, 444, 464, 566, 723
TscAI CASTG 3 cut(s) 346, 733, 999
TseFI GTSAC 1 cut(s) 1115
TseI GCWGC 4 cut(s) 298, 554, 1123, 1294
Tsp45I GTSAC 1 cut(s) 1115
TspDTI ATGAA 6 cut(s) 223, 375, 489, 705, 779, 1087
TspGWI ACGGA 1 cut(s) 1150
TspRI CASTG 3 cut(s) 346, 733, 999
VpaK11BI GGWCC 2 cut(s) 916, 929
XagI CCTNNNNNAGG 1 cut(s) 623
XapI RAATTY 3 cut(s) 291, 425, 703
XceI RCATGY 2 cut(s) 161, 634
XmiI GTMKAC 1 cut(s) 1026
XspI CTAG 2 cut(s) 26, 870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.