Rroxscaffold_3G00231080

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000053
Physical Location & Seq
Forward (+)
16008091 .. 16012422
4332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00231080.1

Sequence Viewer

Length: 756 bp
ATGAAAATCTGTTACCAGGCACTCTTGGACATCTACGCTGATATTGAAAATGAGCTTGCGAAGGAGGGGAAGTTGTATCGCATCCACTACGCCAGAGAATCACTGAAAGTTCAAGTCAGATCTTACCTTCAAGAAGCCAAATGGTTCCATGAGAAATACACACCAACGTTGGATGAATATATGTCAGCTGCTCTTAATACATCCTATTTCATGATGGCAACCGCATCCTTTATTTTAATGGACGGAGATATTGTCACAAAAAATTCCTTGGACTGGGTGTTCACCGACCCAAAGATGGTAAAGGCTTCATCAATAGTAGGCAGACTCGTGGATGACTTGCGATCCCACAAGTTTGAGCAAAAGAGAGGACATGTTGCCTCAGCTATTGATTGCTACACGAAAGAACATTGTGCCACAGAAGAAGAAGCAACAATCGAACTTATTAAACAAGTGAATAATGCATGGAAAGACATGAATGAAGGATGGCTCAACTCCGCCGGCGCTGCTAATGTCCCTAGGCCACTATTACTGCGCCTTATCAACCTTGCACGTGTGATCGAAGTTATATATAAGCATGAAGATGGATTCACTCACGCTGAAACTGGGCTTAAGGATATTATCACGTCTCTGCTTGTCGAACCTGTACCTATATCAGCACGAAAGGGAAGAGTAATGAAGATTCTGAAATGGGTGTATCGAAATCAAGAACAAGAATTGGAAAACAGCAACAACAACAGCAAGACCGGTCTACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

251

Amino Acids

28.8

Weight (kDa)

6.4

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth_C PF03936 1 - 157 1.5e-52 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 2 - 157 5.6e-39 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 748
AciI CCGC 2 cut(s) 222, 495
AclI AACGTT 1 cut(s) 167
AclWI GGATC 1 cut(s) 336
AcsI RAATTY 1 cut(s) 262
AcvI CACGTG 1 cut(s) 551
AfaI GTAC 1 cut(s) 645
AfiI CCNNNNNNNGG 2 cut(s) 273, 295
AflII CTTAAG 1 cut(s) 608
AflIII ACRYGT 2 cut(s) 370, 550
AgeI ACCGGT 1 cut(s) 743
AgsI TTSAA 3 cut(s) 47, 113, 131
AjiI CACGTC 1 cut(s) 624
AjnI CCWGG 1 cut(s) 15
AloI GAACNNNNNNTCC 2 cut(s) 263, 295
AluBI AGCT 3 cut(s) 55, 188, 383
AluI AGCT 3 cut(s) 55, 188, 383
Alw26I GTCTC 1 cut(s) 630
AlwI GGATC 1 cut(s) 336
AoxI GGCC 1 cut(s) 518
ApeKI GCWGC 2 cut(s) 188, 503
ApoI RAATTY 1 cut(s) 262
AsiGI ACCGGT 1 cut(s) 743
AspA2I CCTAGG 1 cut(s) 515
AspLEI GCGC 2 cut(s) 503, 534
AsuHPI GGTGA 1 cut(s) 274
AvrII CCTAGG 1 cut(s) 515
BauI CACGAG 1 cut(s) 326
BbrPI CACGTG 1 cut(s) 551
BbvCI CCTCAGC 1 cut(s) 379
BbvI GCAGC 2 cut(s) 175, 490
BccI CCATC 4 cut(s) 208, 289, 477, 575
BciT130I CCWGG 1 cut(s) 17
BcoDI GTCTC 1 cut(s) 630
BfaI CTAG 1 cut(s) 516
BfoI RGCGCY 1 cut(s) 504
BfrI CTTAAG 1 cut(s) 608
BglII AGATCT 1 cut(s) 119
BisI GCNGC 2 cut(s) 189, 504
BlnI CCTAGG 1 cut(s) 515
BlsI GCNGC 2 cut(s) 190, 505
Bme1390I CCNGG 1 cut(s) 17
BmgBI CACGTC 1 cut(s) 624
BmiI GGNNCC 1 cut(s) 146
BmrFI CCNGG 1 cut(s) 17
BmrI ACTGGG 2 cut(s) 283, 612
BmsI GCATC 2 cut(s) 90, 233
BmuI ACTGGG 2 cut(s) 283, 612
Bpu10I CCTNAGC 1 cut(s) 379
BsaAI YACGTR 1 cut(s) 551
BsaJI CCNNGG 2 cut(s) 267, 515
BsaWI WCCGGW 1 cut(s) 743
BsaXI ACNNNNNCTCC 4 cut(s) 56, 86, 237, 267
Bsc4I CCNNNNNNNGG 2 cut(s) 273, 295
Bse118I RCCGGY 2 cut(s) 497, 743
Bse1I ACTGG 2 cut(s) 278, 607
BseBI CCWGG 1 cut(s) 17
BseDI CCNNGG 2 cut(s) 267, 515
BseGI GGATG 6 cut(s) 81, 178, 200, 224, 337, 488
BseLI CCNNNNNNNGG 2 cut(s) 273, 295
BseMII CTCAG 1 cut(s) 393
BseNI ACTGG 2 cut(s) 278, 607
BseXI GCAGC 2 cut(s) 175, 490
BshFI GGCC 1 cut(s) 520
BshTI ACCGGT 1 cut(s) 743
BsiSI CCGG 2 cut(s) 498, 744
BslFI GGGAC 1 cut(s) 497
BslI CCNNNNNNNGG 2 cut(s) 273, 295
BsmAI GTCTC 1 cut(s) 630
BsmBI CGTCTC 1 cut(s) 630
BsmFI GGGAC 1 cut(s) 497
BsnI GGCC 1 cut(s) 520
Bsp143I GATC 3 cut(s) 119, 341, 555
BspACI CCGC 2 cut(s) 222, 495
BspANI GGCC 1 cut(s) 520
BspCNI CTCAG 1 cut(s) 392
BspHI TCATGA 1 cut(s) 210
BspLI GGNNCC 1 cut(s) 146
BspPI GGATC 1 cut(s) 336
BspTI CTTAAG 1 cut(s) 608
BsrFI RCCGGY 2 cut(s) 497, 743
BsrI ACTGG 2 cut(s) 278, 607
BssAI RCCGGY 2 cut(s) 497, 743
BssECI CCNNGG 2 cut(s) 267, 515
BssMI GATC 3 cut(s) 119, 341, 555
BssSI CACGAG 1 cut(s) 326
BssT1I CCWWGG 2 cut(s) 267, 515
Bst2BI CACGAG 1 cut(s) 326
Bst2UI CCWGG 1 cut(s) 17
Bst6I CTCTTC 1 cut(s) 661
BstAFI CTTAAG 1 cut(s) 608
BstBAI YACGTR 1 cut(s) 551
BstC8I GCNNGC 2 cut(s) 57, 499
BstDEI CTNAG 1 cut(s) 379
BstF5I GGATG 6 cut(s) 81, 178, 200, 224, 337, 488
BstH2I RGCGCY 1 cut(s) 504
BstHHI GCGC 2 cut(s) 503, 534
BstKTI GATC 3 cut(s) 122, 344, 558
BstMAI GTCTC 1 cut(s) 630
BstMBI GATC 3 cut(s) 119, 341, 555
BstMWI GCNNNNNNNGC 1 cut(s) 503
BstNI CCWGG 1 cut(s) 17
BstNSI RCATGY 1 cut(s) 374
BstSCI CCNGG 1 cut(s) 15
BstV1I GCAGC 2 cut(s) 175, 490
BstX2I RGATCY 1 cut(s) 119
BstYI RGATCY 1 cut(s) 119
BsuRI GGCC 1 cut(s) 520
BtrI CACGTC 1 cut(s) 624
BtsCI GGATG 6 cut(s) 81, 178, 200, 224, 337, 488
BtsIMutI CAGTG 1 cut(s) 101
Cac8I GCNNGC 2 cut(s) 57, 499
CciI TCATGA 1 cut(s) 210
CfoI GCGC 2 cut(s) 503, 534
Cfr10I RCCGGY 2 cut(s) 497, 743
Csp6I GTAC 1 cut(s) 644
CspAI ACCGGT 1 cut(s) 743
CviAII CATG 6 cut(s) 149, 211, 371, 462, 472, 575
CviJI RGCY 8 cut(s) 55, 137, 188, 305, 383, 487, 520, 607
CviKI_1 RGCY 8 cut(s) 55, 137, 188, 305, 383, 487, 520, 607
CviQI GTAC 1 cut(s) 644
DdeI CTNAG 1 cut(s) 379
DpnI GATC 3 cut(s) 121, 343, 557
DpnII GATC 3 cut(s) 119, 341, 555
Eam1104I CTCTTC 1 cut(s) 661
EarI CTCTTC 1 cut(s) 661
EciI GGCGGA 1 cut(s) 484
Eco130I CCWWGG 2 cut(s) 267, 515
Eco72I CACGTG 1 cut(s) 551
EcoRII CCWGG 1 cut(s) 15
EcoT14I CCWWGG 2 cut(s) 267, 515
EcoT22I ATGCAT 1 cut(s) 463
ErhI CCWWGG 2 cut(s) 267, 515
Esp3I CGTCTC 1 cut(s) 630
FaeI CATG 6 cut(s) 152, 214, 374, 465, 475, 578
FaqI GGGAC 1 cut(s) 497
FatI CATG 6 cut(s) 148, 210, 370, 461, 471, 574
FblI GTMKAC 1 cut(s) 748
Fnu4HI GCNGC 2 cut(s) 189, 504
FokI GGATG 6 cut(s) 68, 185, 187, 211, 344, 495
Fsp4HI GCNGC 2 cut(s) 189, 504
FspBI CTAG 1 cut(s) 516
GlaI GCGC 2 cut(s) 502, 533
GluI GCNGC 2 cut(s) 189, 504
HaeII RGCGCY 1 cut(s) 504
HaeIII GGCC 1 cut(s) 520
HapII CCGG 2 cut(s) 498, 744
HhaI GCGC 2 cut(s) 503, 534
Hin1II CATG 6 cut(s) 152, 214, 374, 465, 475, 578
Hin6I GCGC 2 cut(s) 501, 532
HinP1I GCGC 2 cut(s) 501, 532
HinfI GANTC 4 cut(s) 98, 324, 585, 679
HpaII CCGG 2 cut(s) 498, 744
HphI GGTGA 1 cut(s) 274
Hpy166II GTNNAC 2 cut(s) 282, 749
Hpy188I TCNGA 3 cut(s) 119, 684, 755
Hpy188III TCNNGA 3 cut(s) 131, 211, 704
Hpy8I GTNNAC 2 cut(s) 282, 749
HpyAV CCTTC 3 cut(s) 55, 137, 473
HpyCH4IV ACGT 3 cut(s) 167, 550, 623
HpyCH4V TGCA 2 cut(s) 461, 548
HpyF10VI GCNNNNNNNGC 1 cut(s) 503
HpyF3I CTNAG 1 cut(s) 379
HpySE526I ACGT 3 cut(s) 167, 550, 623
Hsp92II CATG 6 cut(s) 152, 214, 374, 465, 475, 578
HspAI GCGC 2 cut(s) 501, 532
KroI GCCGGC 1 cut(s) 497
KroNI GCCGGC 1 cut(s) 499
Kzo9I GATC 3 cut(s) 119, 341, 555
LpnPI CCDG 7 cut(s) 2, 29, 106, 259, 511, 588, 654
Lsp1109I GCAGC 2 cut(s) 175, 490
LweI GCATC 2 cut(s) 90, 233
MaeI CTAG 1 cut(s) 516
MaeII ACGT 3 cut(s) 167, 550, 623
MaeIII GTNAC 2 cut(s) 11, 253
MalI GATC 3 cut(s) 121, 343, 557
MboI GATC 3 cut(s) 119, 341, 555
MboII GAAGA 5 cut(s) 431, 434, 590, 678, 688
MflI RGATCY 1 cut(s) 119
MluCI AATT 2 cut(s) 262, 713
MlyI GAGTC 1 cut(s) 318
MmeI TCCRAC 1 cut(s) 150
MnlI CCTC 3 cut(s) 58, 359, 388
Mph1103I ATGCAT 1 cut(s) 463
MreI CGCCGGCG 1 cut(s) 497
MroNI GCCGGC 1 cut(s) 497
MseI TTAA 4 cut(s) 195, 236, 444, 609
MslI CAYNNNNRTG 1 cut(s) 579
MspA1I CMGCKG 1 cut(s) 188
MspCI CTTAAG 1 cut(s) 608
MspI CCGG 2 cut(s) 498, 744
MspR9I CCNGG 1 cut(s) 17
MvaI CCWGG 1 cut(s) 17
MwoI GCNNNNNNNGC 1 cut(s) 503
NaeI GCCGGC 1 cut(s) 499
NdeII GATC 3 cut(s) 119, 341, 555
NgoMIV GCCGGC 1 cut(s) 497
NlaIII CATG 6 cut(s) 152, 214, 374, 465, 475, 578
NlaIV GGNNCC 1 cut(s) 146
NmuCI GTSAC 1 cut(s) 253
NsiI ATGCAT 1 cut(s) 463
NspI RCATGY 1 cut(s) 374
PagI TCATGA 1 cut(s) 210
PciI ACATGT 1 cut(s) 370
PdiI GCCGGC 1 cut(s) 499
PfeI GAWTC 3 cut(s) 98, 585, 679
PinAI ACCGGT 1 cut(s) 743
PkrI GCNGC 2 cut(s) 190, 505
PleI GAGTC 1 cut(s) 318
PmaCI CACGTG 1 cut(s) 551
PmlI CACGTG 1 cut(s) 551
PpsI GAGTC 1 cut(s) 318
Ppu21I YACGTR 1 cut(s) 551
PscI ACATGT 1 cut(s) 370
Psp1406I AACGTT 1 cut(s) 167
Psp6I CCWGG 1 cut(s) 15
PspCI CACGTG 1 cut(s) 551
PspGI CCWGG 1 cut(s) 15
PspN4I GGNNCC 1 cut(s) 146
PsuI RGATCY 1 cut(s) 119
PvuII CAGCTG 1 cut(s) 188
RsaI GTAC 1 cut(s) 645
RsaNI GTAC 1 cut(s) 644
RseI CAYNNNNRTG 1 cut(s) 579
SaqAI TTAA 4 cut(s) 195, 236, 444, 609
SatI GCNGC 2 cut(s) 189, 504
Sau3AI GATC 3 cut(s) 119, 341, 555
SchI GAGTC 1 cut(s) 318
ScrFI CCNGG 1 cut(s) 17
SfaNI GCATC 2 cut(s) 90, 233
SgrAI CRCCGGYG 1 cut(s) 497
SmiMI CAYNNNNRTG 1 cut(s) 579
SmlI CTYRAG 1 cut(s) 608
SmoI CTYRAG 1 cut(s) 608
Sse9I AATT 2 cut(s) 262, 713
SsiI CCGC 2 cut(s) 222, 495
SspMI CTAG 1 cut(s) 516
StyD4I CCNGG 1 cut(s) 15
StyI CCWWGG 2 cut(s) 267, 515
TaiI ACGT 3 cut(s) 170, 553, 626
TaqI TCGA 4 cut(s) 435, 558, 636, 697
TasI AATT 2 cut(s) 262, 713
TfiI GAWTC 3 cut(s) 98, 585, 679
Tru1I TTAA 4 cut(s) 195, 236, 444, 609
Tru9I TTAA 4 cut(s) 195, 236, 444, 609
TscAI CASTG 1 cut(s) 108
TseFI GTSAC 1 cut(s) 253
TseI GCWGC 2 cut(s) 188, 503
Tsp45I GTSAC 1 cut(s) 253
TspDTI ATGAA 8 cut(s) 17, 189, 199, 297, 488, 492, 591, 689
TspGWI ACGGA 1 cut(s) 258
TspRI CASTG 1 cut(s) 108
Vha464I CTTAAG 1 cut(s) 608
XapI RAATTY 1 cut(s) 262
XceI RCATGY 1 cut(s) 374
XmaJI CCTAGG 1 cut(s) 515
XmiI GTMKAC 1 cut(s) 748
XspI CTAG 1 cut(s) 516
Zsp2I ATGCAT 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.