Rorug03G0137800

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000053
Physical Location & Seq
Reverse (-)
11303659 .. 11306580
2922 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0137800.1

Sequence Viewer

Length: 1758 bp
ATGGGTTATCTTCGTTTTCCATCAATGGCGGCATTGCTCTTTTGCTTTTGTGTTGCAGTAGCTCTAATGCCAGAGTTTGCTGAAGGCAGAACAAGACACTACACTTTCAATATTAAGTACCACAATGTCACAAGGTTGTGCAGCACAAGGAGGATCATAAGTGTGAATGGAAAATTCCCAGGACCAAGACTAGTGGCAAGGGAAGGTGATCAGGTTCTCATTAAAGTGGTGAACCGGATCAAAGAGAATGTTACCATTCACTGGCATGGAATTAGGCAACTTAGAAGTGGTTGGGCAGATGGTCCGGCTTACATTACGCAGTGTCCTATCCAATCTGGCCAGTCATACATTTACAACTTCACCATCACAGGCCAGAGAGGAACTCTGTTGTATCATGCTCACATTTCATGGTTGAGAGCTACCCTTTATGGACCCATCATCATTCTCCCAAGAAGAAATGAGTCTTACCCTTTTGTGAAACCCTACAAGCAAATCCCAATTATTCTTGGAGAGTGGTTTAAAGCAGACCCTGAGGCTGTGATTAGCCAGGCTCTTCAGACTGGAGCAGGACCTAATGTTTCGGATGCGTACACTCTGAATGGGCTTCCAGGCCCCACGTACAACTGTTCATCTAAAGATGTATTCAAGCTAAAGGTGAAACCTGGGAAGACATACCTCCTCCGATTGATCAACGCTGCACTCAACGACGAGCTATTCATCAGTGTAGCCAATCATTCCCTAACCGTGGTGGATGTCGATGCTTCTTATGTCAAACCTTTCAACACTGACATACTTCTCATCGCCCCTGGCCAAACCACAAATGTCCTCCTCACAACCAAGCCCAATTTCCCCAATGCCACTTTCCTCATCCTCACGAGCCCTTACTTCACCGGTGCTGGCACCCTCGACAACACCACCGCTGCTGGAATCCTTGAATATGAGAACCCACTAAGTAGTACTAGTACTCCCTCTCCCATCAAAACTCTTCCCCTCCTCAAACCAAGCCTTCCACCCATCAATGCCACCAAGTTTGTCAATGTAACCCAGTTTGTCCAAAACTTGGCCAGCAAGTATCGTAGCTTGGCCAGTACGAAATTCCCAGCCAATGTCCCCCAAACAGTGGACAGGAAATTTTTCTTCACCGTAGGACTTGGAACAAGCCCATGCCCCAAAAACACGACATGCCAAGGACCGAATGGCCAAAAGTTCGCTGCGTCGATTAACAATGTATCATTTGCTCTTCCATCAGTTGCCATGCTTCAGTCACATTTCTTTGGACAGTCCAATGTGACTTACAGAACTGATTTTCCTAGCAAGCCAGTTGTGCAATTTAACTACACAGGAACTGCACCAAATAACACTAATGTGAGCAATGCAACAAGGGCAGTGGTGTTACCATTCAACACAACTGTGGAGCTGGTGTTGCAAGACACAAGCATTATTGGTGCGGAGAGCCACCCACTTCATCTTCATGGGTATAATTTCTTTGTTGTTGGACAAGGTTTTGGAAACTTTGATCAGAACAAAGATCCTGCAAAGTTCAATCTGGTGGACCCTGTTGAGAGGAACACTGTAGGTGTTCCGGCCGGTGGTTGGGTTGCCATTCGTTTCTTGGCAGACAATCCAGGAGTGTGGTTTATGCACTGCCATTTGGAAATTCATACAAGCTGGGGACTGAAGATGGCTTGGATCGTTCAGGATGGGCCACAACCAAATCAGAAGCTACCTCCACCACCGGCAGATCTTCCAAAGTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

585

Amino Acids

64.49

Weight (kDa)

9.39

Isoelectric Point (pI)

33.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 38 - 152 2.2e-42 Multicopper oxidase
Cu-oxidase PF00394 164 - 315 1.4e-41 Multicopper oxidase
Cu-oxidase_2 PF07731 436 - 567 1.4e-43 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 899
AccB7I CCANNNNNTGG 3 cut(s) 261, 1060, 1120
AciI CCGC 3 cut(s) 29, 918, 1448
AclWI GGATC 4 cut(s) 161, 245, 1523, 1697
AcoI YGGCCR 6 cut(s) 337, 808, 1062, 1083, 1198, 1584
AcsI RAATTY 4 cut(s) 173, 1094, 1130, 1656
AcuI CTGAAG 4 cut(s) 102, 539, 1244, 1697
AfaI GTAC 6 cut(s) 119, 590, 620, 958, 964, 1090
AfiI CCNNNNNNNGG 6 cut(s) 261, 745, 1060, 1120, 1589, 1593
AgeI ACCGGT 1 cut(s) 890
AgsI TTSAA 6 cut(s) 109, 646, 781, 935, 1402, 1543
AhlI ACTAGT 2 cut(s) 190, 959
AjnI CCWGG 6 cut(s) 178, 546, 607, 661, 805, 1624
AjuI GAANNNNNNNTTGG 4 cut(s) 830, 845, 862, 877
AleI CACNNNNGTG 2 cut(s) 1364, 1409
AloI GAACNNNNNNTCC 2 cut(s) 1291, 1323
AluBI AGCT 8 cut(s) 62, 419, 649, 712, 1080, 1417, 1668, 1723
AluI AGCT 8 cut(s) 62, 419, 649, 712, 1080, 1417, 1668, 1723
AlwI GGATC 4 cut(s) 161, 245, 1523, 1697
AlwNI CAGNNNCTG 2 cut(s) 530, 1346
AoxI GGCC 9 cut(s) 337, 370, 610, 808, 1062, 1083, 1198, 1584, 1703
ApeKI GCWGC 4 cut(s) 141, 695, 920, 1211
ApoI RAATTY 4 cut(s) 173, 1094, 1130, 1656
AsiGI ACCGGT 1 cut(s) 890
Asp700I GAANNNNTTC 1 cut(s) 1133
AspS9I GGNCC 8 cut(s) 182, 302, 431, 569, 611, 1190, 1552, 1703
AsuHPI GGTGA 6 cut(s) 218, 241, 352, 667, 880, 1132
AvaII GGWCC 6 cut(s) 182, 302, 431, 569, 1190, 1552
AxyI CCTNAGG 1 cut(s) 531
BalI TGGCCA 5 cut(s) 339, 810, 1064, 1085, 1200
BanI GGYRCC 1 cut(s) 899
BanII GRGCYC 1 cut(s) 881
BauI CACGAG 1 cut(s) 874
BbsI GAAGAC 1 cut(s) 674
BbvI GCAGC 4 cut(s) 153, 682, 907, 1198
BccI CCATC 9 cut(s) 28, 293, 371, 443, 983, 1022, 1252, 1675, 1694
BciT130I CCWGG 6 cut(s) 180, 548, 609, 663, 807, 1626
BclI TGATCA 3 cut(s) 208, 687, 1516
BcuI ACTAGT 2 cut(s) 190, 959
BfaI CTAG 3 cut(s) 191, 960, 1311
BfmI CTRYAG 1 cut(s) 1572
BglII AGATCT 1 cut(s) 1741
BisI GCNGC 5 cut(s) 30, 142, 696, 921, 1212
BlsI GCNGC 5 cut(s) 31, 143, 697, 922, 1213
BmcAI AGTACT 2 cut(s) 958, 964
Bme1390I CCNGG 6 cut(s) 180, 548, 609, 663, 807, 1626
Bme18I GGWCC 6 cut(s) 182, 302, 431, 569, 1190, 1552
BmgT120I GGNCC 8 cut(s) 182, 302, 431, 569, 611, 1190, 1552, 1703
BmiI GGNNCC 4 cut(s) 433, 613, 901, 1554
BmrFI CCNGG 6 cut(s) 180, 548, 609, 663, 807, 1626
BmrI ACTGGG 1 cut(s) 1039
BmsI GCATC 2 cut(s) 574, 748
BmuI ACTGGG 1 cut(s) 1039
BpiI GAAGAC 1 cut(s) 674
BplI GAGNNNNNCTC 2 cut(s) 367, 399
BpmI CTGGAG 1 cut(s) 582
BsaAI YACGTR 1 cut(s) 618
BsaJI CCNNGG 5 cut(s) 178, 662, 744, 805, 1186
BsaWI WCCGGW 2 cut(s) 234, 890
BsaXI ACNNNNNCTCC 6 cut(s) 949, 955, 979, 985, 1406, 1436
Bsc4I CCNNNNNNNGG 6 cut(s) 261, 745, 1060, 1120, 1589, 1593
Bse118I RCCGGY 3 cut(s) 890, 1586, 1735
Bse1I ACTGG 6 cut(s) 266, 340, 565, 1045, 1086, 1319
Bse21I CCTNAGG 1 cut(s) 531
Bse3DI GCAATG 2 cut(s) 32, 1378
BseBI CCWGG 6 cut(s) 180, 548, 609, 663, 807, 1626
BseDI CCNNGG 5 cut(s) 178, 662, 744, 805, 1186
BseGI GGATG 4 cut(s) 589, 757, 867, 1705
BseLI CCNNNNNNNGG 6 cut(s) 261, 745, 1060, 1120, 1589, 1593
BseMI GCAATG 2 cut(s) 32, 1378
BseMII CTCAG 1 cut(s) 522
BseNI ACTGG 6 cut(s) 266, 340, 565, 1045, 1086, 1319
BseRI GAGGAG 3 cut(s) 668, 818, 983
BseX3I CGGCCG 1 cut(s) 1584
BseXI GCAGC 4 cut(s) 153, 682, 907, 1198
BseYI CCCAGC 2 cut(s) 1099, 1668
BsgI GTGCAG 3 cut(s) 160, 681, 1332
Bsh1285I CGRYCG 1 cut(s) 1587
BshFI GGCC 9 cut(s) 339, 372, 612, 810, 1064, 1085, 1200, 1586, 1705
BshNI GGYRCC 1 cut(s) 899
BshTI ACCGGT 1 cut(s) 890
BsiEI CGRYCG 1 cut(s) 1587
BsiSI CCGG 6 cut(s) 235, 305, 891, 1583, 1587, 1736
BslFI GGGAC 2 cut(s) 1094, 1686
BslI CCNNNNNNNGG 6 cut(s) 261, 745, 1060, 1120, 1589, 1593
BsmFI GGGAC 2 cut(s) 1094, 1686
BsnI GGCC 9 cut(s) 339, 372, 612, 810, 1064, 1085, 1200, 1586, 1705
Bsp1286I GDGCHC 1 cut(s) 881
Bsp143I GATC 8 cut(s) 153, 208, 237, 687, 1516, 1528, 1689, 1741
BspACI CCGC 3 cut(s) 29, 918, 1448
BspANI GGCC 9 cut(s) 339, 372, 612, 810, 1064, 1085, 1200, 1586, 1705
BspCNI CTCAG 1 cut(s) 523
BspLI GGNNCC 4 cut(s) 433, 613, 901, 1554
BspPI GGATC 4 cut(s) 161, 245, 1523, 1697
BspQI GCTCTTC 2 cut(s) 558, 1245
BspT107I GGYRCC 1 cut(s) 899
BsrDI GCAATG 2 cut(s) 32, 1378
BsrFI RCCGGY 3 cut(s) 890, 1586, 1735
BsrI ACTGG 6 cut(s) 266, 340, 565, 1045, 1086, 1319
BssAI RCCGGY 3 cut(s) 890, 1586, 1735
BssECI CCNNGG 5 cut(s) 178, 662, 744, 805, 1186
BssMI GATC 8 cut(s) 153, 208, 237, 687, 1516, 1528, 1689, 1741
BssSI CACGAG 1 cut(s) 874
BssT1I CCWWGG 1 cut(s) 1186
Bst2BI CACGAG 1 cut(s) 874
Bst2UI CCWGG 6 cut(s) 180, 548, 609, 663, 807, 1626
Bst4CI ACNGT 7 cut(s) 626, 745, 1120, 1144, 1281, 1411, 1573
Bst6I CTCTTC 3 cut(s) 558, 990, 1245
BstBAI YACGTR 1 cut(s) 618
BstC8I GCNNGC 3 cut(s) 898, 1066, 1316
BstDEI CTNAG 3 cut(s) 281, 531, 950
BstDSI CCRYGG 1 cut(s) 744
BstF5I GGATG 4 cut(s) 589, 757, 867, 1705
BstKTI GATC 8 cut(s) 156, 211, 240, 690, 1519, 1531, 1692, 1744
BstMBI GATC 8 cut(s) 153, 208, 237, 687, 1516, 1528, 1689, 1741
BstMCI CGRYCG 1 cut(s) 1587
BstMWI GCNNNNNNNGC 3 cut(s) 1324, 1382, 1423
BstNI CCWGG 6 cut(s) 180, 548, 609, 663, 807, 1626
BstNSI RCATGY 1 cut(s) 1185
BstSCI CCNGG 6 cut(s) 178, 546, 607, 661, 805, 1624
BstSFI CTRYAG 1 cut(s) 1572
BstV1I GCAGC 4 cut(s) 153, 682, 907, 1198
BstV2I GAAGAC 1 cut(s) 674
BstX2I RGATCY 2 cut(s) 1528, 1741
BstXI CCANNNNNNTGG 1 cut(s) 1632
BstYI RGATCY 2 cut(s) 1528, 1741
BstZI CGGCCG 1 cut(s) 1584
Bsu36I CCTNAGG 1 cut(s) 531
BsuRI GGCC 9 cut(s) 339, 372, 612, 810, 1064, 1085, 1200, 1586, 1705
BtgI CCRYGG 1 cut(s) 744
BtgZI GCGATG 1 cut(s) 784
BtsCI GGATG 4 cut(s) 589, 757, 867, 1705
BtsI GCAGTG 3 cut(s) 326, 1392, 1642
BtsIMutI CAGTG 8 cut(s) 259, 326, 727, 783, 1125, 1392, 1569, 1642
Cac8I GCNNGC 3 cut(s) 898, 1066, 1316
CaiI CAGNNNCTG 2 cut(s) 530, 1346
Cfr10I RCCGGY 3 cut(s) 890, 1586, 1735
Cfr13I GGNCC 8 cut(s) 182, 302, 431, 569, 611, 1190, 1552, 1703
CseI GACGC 1 cut(s) 1203
Csp6I GTAC 6 cut(s) 118, 589, 619, 957, 963, 1089
CspAI ACCGGT 1 cut(s) 890
CspCI CAANNNNNGTGG 6 cut(s) 174, 209, 1012, 1047, 1368, 1403
CviAII CATG 7 cut(s) 266, 395, 408, 1164, 1182, 1255, 1472
CviQI GTAC 6 cut(s) 118, 589, 619, 957, 963, 1089
DdeI CTNAG 3 cut(s) 281, 531, 950
DpnI GATC 8 cut(s) 155, 210, 239, 689, 1518, 1530, 1691, 1743
DpnII GATC 8 cut(s) 153, 208, 237, 687, 1516, 1528, 1689, 1741
DraI TTTAAA 1 cut(s) 520
EaeI YGGCCR 6 cut(s) 337, 808, 1062, 1083, 1198, 1584
EagI CGGCCG 1 cut(s) 1584
Eam1104I CTCTTC 3 cut(s) 558, 990, 1245
EarI CTCTTC 3 cut(s) 558, 990, 1245
EclXI CGGCCG 1 cut(s) 1584
Eco130I CCWWGG 1 cut(s) 1186
Eco24I GRGCYC 1 cut(s) 881
Eco47I GGWCC 6 cut(s) 182, 302, 431, 569, 1190, 1552
Eco52I CGGCCG 1 cut(s) 1584
Eco57I CTGAAG 4 cut(s) 102, 539, 1244, 1697
Eco81I CCTNAGG 1 cut(s) 531
EcoO109I RGGNCCY 2 cut(s) 569, 611
EcoRII CCWGG 6 cut(s) 178, 546, 607, 661, 805, 1624
EcoT14I CCWWGG 1 cut(s) 1186
EcoT38I GRGCYC 1 cut(s) 881
ErhI CCWWGG 1 cut(s) 1186
FaeI CATG 7 cut(s) 269, 398, 411, 1167, 1185, 1258, 1475
FaqI GGGAC 2 cut(s) 1094, 1686
FatI CATG 7 cut(s) 265, 394, 407, 1163, 1181, 1254, 1471
FbaI TGATCA 3 cut(s) 208, 687, 1516
Fnu4HI GCNGC 5 cut(s) 30, 142, 696, 921, 1212
FokI GGATG 4 cut(s) 596, 764, 854, 1712
FriOI GRGCYC 1 cut(s) 881
Fsp4HI GCNGC 5 cut(s) 30, 142, 696, 921, 1212
FspBI CTAG 3 cut(s) 191, 960, 1311
GluI GCNGC 5 cut(s) 30, 142, 696, 921, 1212
GsaI CCCAGC 2 cut(s) 1103, 1672
GsuI CTGGAG 1 cut(s) 582
HaeIII GGCC 9 cut(s) 339, 372, 612, 810, 1064, 1085, 1200, 1586, 1705
HapII CCGG 6 cut(s) 235, 305, 891, 1583, 1587, 1736
HgaI GACGC 1 cut(s) 1203
Hin1II CATG 7 cut(s) 269, 398, 411, 1167, 1185, 1258, 1475
HinfI GANTC 2 cut(s) 461, 927
HpaII CCGG 6 cut(s) 235, 305, 891, 1583, 1587, 1736
HphI GGTGA 6 cut(s) 218, 241, 352, 667, 880, 1132
Hpy166II GTNNAC 4 cut(s) 232, 591, 1123, 1552
Hpy188I TCNGA 6 cut(s) 558, 583, 597, 683, 1521, 1719
Hpy188III TCNNGA 2 cut(s) 874, 1697
Hpy8I GTNNAC 4 cut(s) 232, 591, 1123, 1552
Hpy99I CGWCG 2 cut(s) 710, 1219
HpyAV CCTTC 3 cut(s) 77, 197, 1016
HpyCH4III ACNGT 7 cut(s) 626, 745, 1120, 1144, 1281, 1411, 1573
HpyCH4IV ACGT 1 cut(s) 617
HpyCH4V TGCA 9 cut(s) 56, 141, 698, 1327, 1349, 1376, 1426, 1535, 1642
HpyF10VI GCNNNNNNNGC 3 cut(s) 1324, 1382, 1423
HpyF3I CTNAG 3 cut(s) 281, 531, 950
HpySE526I ACGT 1 cut(s) 617
Hsp92II CATG 7 cut(s) 269, 398, 411, 1167, 1185, 1258, 1475
Ksp22I TGATCA 3 cut(s) 208, 687, 1516
Kzo9I GATC 8 cut(s) 153, 208, 237, 687, 1516, 1528, 1689, 1741
LguI GCTCTTC 2 cut(s) 558, 1245
LmnI GCTCC 2 cut(s) 563, 1414
Lsp1109I GCAGC 4 cut(s) 153, 682, 907, 1198
LweI GCATC 2 cut(s) 574, 748
MaeI CTAG 3 cut(s) 191, 960, 1311
MaeII ACGT 1 cut(s) 617
MaeIII GTNAC 6 cut(s) 127, 250, 1039, 1263, 1288, 1392
MalI GATC 8 cut(s) 155, 210, 239, 689, 1518, 1530, 1691, 1743
MboI GATC 8 cut(s) 153, 208, 237, 687, 1516, 1528, 1689, 1741
MboII GAAGA 9 cut(s) 465, 545, 679, 977, 1129, 1232, 1460, 1690, 1736
MflI RGATCY 2 cut(s) 1528, 1741
MhlI GDGCHC 1 cut(s) 881
MlsI TGGCCA 5 cut(s) 339, 810, 1064, 1085, 1200
MluCI AATT 9 cut(s) 173, 270, 498, 844, 1094, 1130, 1328, 1480, 1656
MluNI TGGCCA 5 cut(s) 339, 810, 1064, 1085, 1200
MlyI GAGTC 1 cut(s) 470
MmeI TCCRAC 1 cut(s) 1474
Mox20I TGGCCA 5 cut(s) 339, 810, 1064, 1085, 1200
MroXI GAANNNNTTC 1 cut(s) 1133
MscI TGGCCA 5 cut(s) 339, 810, 1064, 1085, 1200
MseI TTAA 5 cut(s) 114, 222, 519, 1221, 1332
MslI CAYNNNNRTG 6 cut(s) 161, 224, 264, 1364, 1409, 1470
Msp20I TGGCCA 5 cut(s) 339, 810, 1064, 1085, 1200
MspA1I CMGCKG 1 cut(s) 920
MspI CCGG 6 cut(s) 235, 305, 891, 1583, 1587, 1736
MspR9I CCNGG 6 cut(s) 180, 548, 609, 663, 807, 1626
MvaI CCWGG 6 cut(s) 180, 548, 609, 663, 807, 1626
MwoI GCNNNNNNNGC 3 cut(s) 1324, 1382, 1423
NdeII GATC 8 cut(s) 153, 208, 237, 687, 1516, 1528, 1689, 1741
NlaIII CATG 7 cut(s) 269, 398, 411, 1167, 1185, 1258, 1475
NlaIV GGNNCC 4 cut(s) 433, 613, 901, 1554
NmuCI GTSAC 3 cut(s) 127, 1263, 1288
NspI RCATGY 1 cut(s) 1185
OliI CACNNNNGTG 2 cut(s) 1364, 1409
PciSI GCTCTTC 2 cut(s) 558, 1245
PdmI GAANNNNTTC 1 cut(s) 1133
PfeI GAWTC 1 cut(s) 927
PflMI CCANNNNNTGG 3 cut(s) 261, 1060, 1120
PfoI TCCNGGA 1 cut(s) 1624
PinAI ACCGGT 1 cut(s) 890
PkrI GCNGC 5 cut(s) 31, 143, 697, 922, 1213
PleI GAGTC 1 cut(s) 469
PpsI GAGTC 1 cut(s) 469
Ppu21I YACGTR 1 cut(s) 618
PpuMI RGGWCCY 1 cut(s) 569
Psp5II RGGWCCY 1 cut(s) 569
Psp6I CCWGG 6 cut(s) 178, 546, 607, 661, 805, 1624
PspFI CCCAGC 2 cut(s) 1099, 1668
PspGI CCWGG 6 cut(s) 178, 546, 607, 661, 805, 1624
PspN4I GGNNCC 4 cut(s) 433, 613, 901, 1554
PspPI GGNCC 8 cut(s) 182, 302, 431, 569, 611, 1190, 1552, 1703
PspPPI RGGWCCY 1 cut(s) 569
PstNI CAGNNNCTG 2 cut(s) 530, 1346
PsuI RGATCY 2 cut(s) 1528, 1741
RsaI GTAC 6 cut(s) 119, 590, 620, 958, 964, 1090
RsaNI GTAC 6 cut(s) 118, 589, 619, 957, 963, 1089
RseI CAYNNNNRTG 6 cut(s) 161, 224, 264, 1364, 1409, 1470
SapI GCTCTTC 2 cut(s) 558, 1245
SaqAI TTAA 5 cut(s) 114, 222, 519, 1221, 1332
SatI GCNGC 5 cut(s) 30, 142, 696, 921, 1212
Sau3AI GATC 8 cut(s) 153, 208, 237, 687, 1516, 1528, 1689, 1741
Sau96I GGNCC 8 cut(s) 182, 302, 431, 569, 611, 1190, 1552, 1703
ScaI AGTACT 2 cut(s) 958, 964
SchI GAGTC 1 cut(s) 470
ScrFI CCNGG 6 cut(s) 180, 548, 609, 663, 807, 1626
SduI GDGCHC 1 cut(s) 881
SfaNI GCATC 2 cut(s) 574, 748
SfcI CTRYAG 1 cut(s) 1572
SgrAI CRCCGGYG 1 cut(s) 890
SinI GGWCC 6 cut(s) 182, 302, 431, 569, 1190, 1552
SmiMI CAYNNNNRTG 6 cut(s) 161, 224, 264, 1364, 1409, 1470
SpeI ACTAGT 2 cut(s) 190, 959
Sse9I AATT 9 cut(s) 173, 270, 498, 844, 1094, 1130, 1328, 1480, 1656
SsiI CCGC 3 cut(s) 29, 918, 1448
SspI AATATT 1 cut(s) 112
SspMI CTAG 3 cut(s) 191, 960, 1311
StyD4I CCNGG 6 cut(s) 178, 546, 607, 661, 805, 1624
StyI CCWWGG 1 cut(s) 1186
TaaI ACNGT 7 cut(s) 626, 745, 1120, 1144, 1281, 1411, 1573
TaiI ACGT 1 cut(s) 620
TaqI TCGA 3 cut(s) 756, 906, 1217
TaqII GACCGA 1 cut(s) 1207
TasI AATT 9 cut(s) 173, 270, 498, 844, 1094, 1130, 1328, 1480, 1656
TatI WGTACW 2 cut(s) 956, 962
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 1 cut(s) 927
Tru1I TTAA 5 cut(s) 114, 222, 519, 1221, 1332
Tru9I TTAA 5 cut(s) 114, 222, 519, 1221, 1332
TscAI CASTG 8 cut(s) 266, 326, 727, 790, 1125, 1392, 1576, 1649
TseFI GTSAC 3 cut(s) 127, 1263, 1288
TseI GCWGC 4 cut(s) 141, 695, 920, 1211
Tsp45I GTSAC 3 cut(s) 127, 1263, 1288
TspDTI ATGAA 6 cut(s) 396, 618, 706, 1454, 1460, 1649
TspRI CASTG 8 cut(s) 266, 326, 727, 790, 1125, 1392, 1576, 1649
Van91I CCANNNNNTGG 3 cut(s) 261, 1060, 1120
VpaK11BI GGWCC 6 cut(s) 182, 302, 431, 569, 1190, 1552
XapI RAATTY 4 cut(s) 173, 1094, 1130, 1656
XceI RCATGY 1 cut(s) 1185
XcmI CCANNNNNNNNNTGG 2 cut(s) 1193, 1609
XmnI GAANNNNTTC 1 cut(s) 1133
XspI CTAG 3 cut(s) 191, 960, 1311
ZrmI AGTACT 2 cut(s) 958, 964
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.