(-)-germacrene D synthase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF620 | PF04788 | 138 - 380 | 1.3e-111 | Protein of unknown function (DUF620) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 345 |
| Acc36I | ACCTGC | 1 cut(s) | 455 |
| AccI | GTMKAC | 1 cut(s) | 1052 |
| AciI | CCGC | 4 cut(s) | 41, 378, 567, 667 |
| AcoI | YGGCCR | 1 cut(s) | 582 |
| AcyI | GRCGYC | 1 cut(s) | 53 |
| AfaI | GTAC | 5 cut(s) | 205, 631, 765, 842, 1170 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 543, 626, 901, 1026 |
| AflIII | ACRYGT | 1 cut(s) | 411 |
| AgsI | TTSAA | 5 cut(s) | 12, 332, 388, 908, 1102 |
| AjnI | CCWGG | 1 cut(s) | 675 |
| AluBI | AGCT | 4 cut(s) | 111, 266, 705, 1039 |
| AluI | AGCT | 4 cut(s) | 111, 266, 705, 1039 |
| Alw21I | GWGCWC | 3 cut(s) | 145, 698, 990 |
| Alw26I | GTCTC | 5 cut(s) | 42, 214, 443, 552, 932 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 367 |
| AoxI | GGCC | 4 cut(s) | 582, 646, 679, 1003 |
| ApeKI | GCWGC | 5 cut(s) | 43, 371, 391, 638, 954 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 311, 343, 796, 828 |
| AspLEI | GCGC | 1 cut(s) | 346 |
| AspS9I | GGNCC | 4 cut(s) | 68, 647, 679, 812 |
| AsuC2I | CCSGG | 2 cut(s) | 537, 1110 |
| AsuHPI | GGTGA | 1 cut(s) | 1167 |
| AvaII | GGWCC | 2 cut(s) | 68, 812 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 347, 380 |
| BbsI | GAAGAC | 2 cut(s) | 146, 485 |
| Bbv12I | GWGCWC | 3 cut(s) | 145, 698, 990 |
| BbvI | GCAGC | 5 cut(s) | 55, 383, 403, 625, 966 |
| BccI | CCATC | 5 cut(s) | 421, 430, 587, 974, 1019 |
| BceAI | ACGGC | 2 cut(s) | 859, 990 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 797, 831 |
| BciT130I | CCWGG | 1 cut(s) | 677 |
| BclI | TGATCA | 1 cut(s) | 295 |
| BcnI | CCSGG | 2 cut(s) | 537, 1110 |
| BcoDI | GTCTC | 5 cut(s) | 42, 214, 443, 552, 932 |
| BfaI | CTAG | 3 cut(s) | 683, 900, 1062 |
| BfmI | CTRYAG | 3 cut(s) | 462, 777, 816 |
| BfuAI | ACCTGC | 1 cut(s) | 455 |
| BisI | GCNGC | 7 cut(s) | 44, 372, 392, 568, 639, 667, 955 |
| BlsI | GCNGC | 7 cut(s) | 45, 373, 393, 569, 640, 668, 956 |
| Bme1390I | CCNGG | 3 cut(s) | 537, 677, 1110 |
| Bme18I | GGWCC | 2 cut(s) | 68, 812 |
| BmgT120I | GGNCC | 4 cut(s) | 68, 647, 679, 812 |
| BmrFI | CCNGG | 3 cut(s) | 537, 677, 1110 |
| BmsI | GCATC | 1 cut(s) | 678 |
| BpiI | GAAGAC | 2 cut(s) | 146, 485 |
| BpuEI | CTTGAG | 2 cut(s) | 144, 261 |
| BpuMI | CCSGG | 2 cut(s) | 537, 1110 |
| BsaAI | YACGTR | 1 cut(s) | 128 |
| BsaHI | GRCGYC | 1 cut(s) | 53 |
| BsaI | GGTCTC | 3 cut(s) | 42, 552, 932 |
| BsaJI | CCNNGG | 5 cut(s) | 620, 676, 714, 1109, 1119 |
| BsaWI | WCCGGW | 1 cut(s) | 1026 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 543, 626, 901, 1026 |
| Bse1I | ACTGG | 2 cut(s) | 282, 290 |
| Bse3DI | GCAATG | 2 cut(s) | 957, 1131 |
| BseBI | CCWGG | 1 cut(s) | 677 |
| BseDI | CCNNGG | 5 cut(s) | 620, 676, 714, 1109, 1119 |
| BseGI | GGATG | 4 cut(s) | 298, 321, 432, 672 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 543, 626, 901, 1026 |
| BseMI | GCAATG | 2 cut(s) | 957, 1131 |
| BseMII | CTCAG | 1 cut(s) | 444 |
| BseNI | ACTGG | 2 cut(s) | 282, 290 |
| BseRI | GAGGAG | 1 cut(s) | 860 |
| BseXI | GCAGC | 5 cut(s) | 55, 383, 403, 625, 966 |
| BshFI | GGCC | 4 cut(s) | 584, 648, 681, 1005 |
| BsiHKAI | GWGCWC | 3 cut(s) | 145, 698, 990 |
| BsiSI | CCGG | 5 cut(s) | 212, 537, 585, 1027, 1109 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 543, 626, 901, 1026 |
| BsmAI | GTCTC | 5 cut(s) | 42, 214, 443, 552, 932 |
| BsnI | GGCC | 4 cut(s) | 584, 648, 681, 1005 |
| Bso31I | GGTCTC | 3 cut(s) | 42, 552, 932 |
| Bsp1286I | GDGCHC | 3 cut(s) | 145, 698, 990 |
| Bsp1407I | TGTACA | 1 cut(s) | 1168 |
| Bsp143I | GATC | 1 cut(s) | 295 |
| Bsp19I | CCATGG | 1 cut(s) | 1119 |
| BspACI | CCGC | 4 cut(s) | 41, 378, 567, 667 |
| BspANI | GGCC | 4 cut(s) | 584, 648, 681, 1005 |
| BspCNI | CTCAG | 1 cut(s) | 445 |
| BspMAI | CTGCAG | 3 cut(s) | 466, 781, 820 |
| BspMI | ACCTGC | 1 cut(s) | 455 |
| BspTNI | GGTCTC | 3 cut(s) | 42, 552, 932 |
| BsrDI | GCAATG | 2 cut(s) | 957, 1131 |
| BsrGI | TGTACA | 1 cut(s) | 1168 |
| BsrI | ACTGG | 2 cut(s) | 282, 290 |
| BssECI | CCNNGG | 5 cut(s) | 620, 676, 714, 1109, 1119 |
| BssMI | GATC | 1 cut(s) | 295 |
| BssNAI | GTATAC | 1 cut(s) | 1053 |
| BssNI | GRCGYC | 1 cut(s) | 53 |
| BssT1I | CCWWGG | 3 cut(s) | 620, 714, 1119 |
| Bst1107I | GTATAC | 1 cut(s) | 1053 |
| Bst2UI | CCWGG | 1 cut(s) | 677 |
| Bst4CI | ACNGT | 5 cut(s) | 363, 604, 785, 928, 1021 |
| Bst6I | CTCTTC | 2 cut(s) | 731, 1065 |
| BstACI | GRCGYC | 1 cut(s) | 53 |
| BstAUI | TGTACA | 1 cut(s) | 1168 |
| BstBAI | YACGTR | 1 cut(s) | 128 |
| BstC8I | GCNNGC | 4 cut(s) | 376, 703, 834, 1037 |
| BstDEI | CTNAG | 2 cut(s) | 453, 880 |
| BstDSI | CCRYGG | 1 cut(s) | 1119 |
| BstF5I | GGATG | 4 cut(s) | 298, 321, 432, 672 |
| BstHHI | GCGC | 1 cut(s) | 346 |
| BstKTI | GATC | 1 cut(s) | 298 |
| BstMAI | GTCTC | 5 cut(s) | 42, 214, 443, 552, 932 |
| BstMBI | GATC | 1 cut(s) | 295 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 52, 654, 663, 702 |
| BstNI | CCWGG | 1 cut(s) | 677 |
| BstNSI | RCATGY | 3 cut(s) | 415, 544, 836 |
| BstSCI | CCNGG | 3 cut(s) | 535, 675, 1108 |
| BstSFI | CTRYAG | 3 cut(s) | 462, 777, 816 |
| BstV1I | GCAGC | 5 cut(s) | 55, 383, 403, 625, 966 |
| BstV2I | GAAGAC | 2 cut(s) | 146, 485 |
| BstZ17I | GTATAC | 1 cut(s) | 1053 |
| BsuRI | GGCC | 4 cut(s) | 584, 648, 681, 1005 |
| BtgI | CCRYGG | 1 cut(s) | 1119 |
| BtgZI | GCGATG | 2 cut(s) | 976, 997 |
| BtsCI | GGATG | 4 cut(s) | 298, 321, 432, 672 |
| BtsIMutI | CAGTG | 1 cut(s) | 289 |
| BveI | ACCTGC | 1 cut(s) | 455 |
| Cac8I | GCNNGC | 4 cut(s) | 376, 703, 834, 1037 |
| CaiI | CAGNNNCTG | 1 cut(s) | 367 |
| CfoI | GCGC | 1 cut(s) | 346 |
| Cfr13I | GGNCC | 4 cut(s) | 68, 647, 679, 812 |
| CseI | GACGC | 1 cut(s) | 61 |
| Csp6I | GTAC | 5 cut(s) | 204, 630, 764, 841, 1169 |
| CviAII | CATG | 8 cut(s) | 61, 304, 412, 541, 635, 833, 1120, 1179 |
| CviQI | GTAC | 5 cut(s) | 204, 630, 764, 841, 1169 |
| DdeI | CTNAG | 2 cut(s) | 453, 880 |
| DpnI | GATC | 1 cut(s) | 297 |
| DpnII | GATC | 1 cut(s) | 295 |
| EaeI | YGGCCR | 1 cut(s) | 582 |
| Eam1104I | CTCTTC | 2 cut(s) | 731, 1065 |
| EarI | CTCTTC | 2 cut(s) | 731, 1065 |
| Eco130I | CCWWGG | 3 cut(s) | 620, 714, 1119 |
| Eco31I | GGTCTC | 3 cut(s) | 42, 552, 932 |
| Eco47I | GGWCC | 2 cut(s) | 68, 812 |
| EcoO109I | RGGNCCY | 3 cut(s) | 647, 679, 812 |
| EcoRII | CCWGG | 1 cut(s) | 675 |
| EcoT14I | CCWWGG | 3 cut(s) | 620, 714, 1119 |
| EcoT22I | ATGCAT | 1 cut(s) | 838 |
| ErhI | CCWWGG | 3 cut(s) | 620, 714, 1119 |
| FaeI | CATG | 8 cut(s) | 64, 307, 415, 544, 638, 836, 1123, 1182 |
| FatI | CATG | 8 cut(s) | 60, 303, 411, 540, 634, 832, 1119, 1178 |
| FauI | CCCGC | 1 cut(s) | 371 |
| FauNDI | CATATG | 1 cut(s) | 187 |
| FbaI | TGATCA | 1 cut(s) | 295 |
| FblI | GTMKAC | 1 cut(s) | 1052 |
| Fnu4HI | GCNGC | 7 cut(s) | 44, 372, 392, 568, 639, 667, 955 |
| FokI | GGATG | 4 cut(s) | 285, 308, 439, 659 |
| Fsp4HI | GCNGC | 7 cut(s) | 44, 372, 392, 568, 639, 667, 955 |
| FspBI | CTAG | 3 cut(s) | 683, 900, 1062 |
| FspI | TGCGCA | 1 cut(s) | 345 |
| GlaI | GCGC | 1 cut(s) | 345 |
| GluI | GCNGC | 7 cut(s) | 44, 372, 392, 568, 639, 667, 955 |
| HaeIII | GGCC | 4 cut(s) | 584, 648, 681, 1005 |
| HapII | CCGG | 5 cut(s) | 212, 537, 585, 1027, 1109 |
| HgaI | GACGC | 1 cut(s) | 61 |
| HhaI | GCGC | 1 cut(s) | 346 |
| Hin1I | GRCGYC | 1 cut(s) | 53 |
| Hin1II | CATG | 8 cut(s) | 64, 307, 415, 544, 638, 836, 1123, 1182 |
| Hin6I | GCGC | 1 cut(s) | 344 |
| HinP1I | GCGC | 1 cut(s) | 344 |
| HindIII | AAGCTT | 1 cut(s) | 703 |
| HinfI | GANTC | 2 cut(s) | 867, 887 |
| HpaII | CCGG | 5 cut(s) | 212, 537, 585, 1027, 1109 |
| HphI | GGTGA | 1 cut(s) | 1167 |
| Hpy166II | GTNNAC | 2 cut(s) | 866, 1053 |
| Hpy188I | TCNGA | 1 cut(s) | 140 |
| Hpy188III | TCNNGA | 2 cut(s) | 71, 551 |
| Hpy8I | GTNNAC | 2 cut(s) | 866, 1053 |
| Hpy99I | CGWCG | 1 cut(s) | 752 |
| HpyAV | CCTTC | 4 cut(s) | 59, 86, 97, 803 |
| HpyCH4III | ACNGT | 5 cut(s) | 363, 604, 785, 928, 1021 |
| HpyCH4IV | ACGT | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 7 cut(s) | 85, 402, 464, 779, 818, 836, 962 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 52, 654, 663, 702 |
| HpyF3I | CTNAG | 2 cut(s) | 453, 880 |
| HpySE526I | ACGT | 1 cut(s) | 127 |
| Hsp92I | GRCGYC | 1 cut(s) | 53 |
| Hsp92II | CATG | 8 cut(s) | 64, 307, 415, 544, 638, 836, 1123, 1182 |
| HspAI | GCGC | 1 cut(s) | 344 |
| Ksp22I | TGATCA | 1 cut(s) | 295 |
| Kzo9I | GATC | 1 cut(s) | 295 |
| LmnI | GCTCC | 2 cut(s) | 271, 1141 |
| Lsp1109I | GCAGC | 5 cut(s) | 55, 383, 403, 625, 966 |
| LweI | GCATC | 1 cut(s) | 678 |
| MaeI | CTAG | 3 cut(s) | 683, 900, 1062 |
| MaeII | ACGT | 1 cut(s) | 127 |
| MaeIII | GTNAC | 2 cut(s) | 167, 531 |
| MalI | GATC | 1 cut(s) | 297 |
| MboI | GATC | 1 cut(s) | 295 |
| MboII | GAAGA | 6 cut(s) | 34, 101, 146, 490, 748, 1082 |
| MhlI | GDGCHC | 3 cut(s) | 145, 698, 990 |
| MluCI | AATT | 3 cut(s) | 270, 554, 825 |
| MlyI | GAGTC | 2 cut(s) | 861, 881 |
| Mph1103I | ATGCAT | 1 cut(s) | 838 |
| MspI | CCGG | 5 cut(s) | 212, 537, 585, 1027, 1109 |
| MspR9I | CCNGG | 3 cut(s) | 537, 677, 1110 |
| MvaI | CCWGG | 1 cut(s) | 677 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 52, 654, 663, 702 |
| NciI | CCSGG | 2 cut(s) | 537, 1110 |
| NcoI | CCATGG | 1 cut(s) | 1119 |
| NdeI | CATATG | 1 cut(s) | 187 |
| NdeII | GATC | 1 cut(s) | 295 |
| NlaIII | CATG | 8 cut(s) | 64, 307, 415, 544, 638, 836, 1123, 1182 |
| NsbI | TGCGCA | 1 cut(s) | 345 |
| NsiI | ATGCAT | 1 cut(s) | 838 |
| NspI | RCATGY | 3 cut(s) | 415, 544, 836 |
| PaeI | GCATGC | 1 cut(s) | 836 |
| PciI | ACATGT | 1 cut(s) | 411 |
| PkrI | GCNGC | 7 cut(s) | 45, 373, 393, 569, 640, 668, 956 |
| PleI | GAGTC | 2 cut(s) | 861, 881 |
| PpsI | GAGTC | 2 cut(s) | 861, 881 |
| Ppu21I | YACGTR | 1 cut(s) | 128 |
| PpuMI | RGGWCCY | 1 cut(s) | 812 |
| PscI | ACATGT | 1 cut(s) | 411 |
| Psp5II | RGGWCCY | 1 cut(s) | 812 |
| Psp6I | CCWGG | 1 cut(s) | 675 |
| PspGI | CCWGG | 1 cut(s) | 675 |
| PspPI | GGNCC | 4 cut(s) | 68, 647, 679, 812 |
| PspPPI | RGGWCCY | 1 cut(s) | 812 |
| PstI | CTGCAG | 3 cut(s) | 466, 781, 820 |
| PstNI | CAGNNNCTG | 1 cut(s) | 367 |
| RsaI | GTAC | 5 cut(s) | 205, 631, 765, 842, 1170 |
| RsaNI | GTAC | 5 cut(s) | 204, 630, 764, 841, 1169 |
| SatI | GCNGC | 7 cut(s) | 44, 372, 392, 568, 639, 667, 955 |
| Sau3AI | GATC | 1 cut(s) | 295 |
| Sau96I | GGNCC | 4 cut(s) | 68, 647, 679, 812 |
| SchI | GAGTC | 2 cut(s) | 861, 881 |
| ScrFI | CCNGG | 3 cut(s) | 537, 677, 1110 |
| SduI | GDGCHC | 3 cut(s) | 145, 698, 990 |
| SfaNI | GCATC | 1 cut(s) | 678 |
| SfcI | CTRYAG | 3 cut(s) | 462, 777, 816 |
| SinI | GGWCC | 2 cut(s) | 68, 812 |
| SmlI | CTYRAG | 2 cut(s) | 159, 276 |
| SmoI | CTYRAG | 2 cut(s) | 159, 276 |
| SphI | GCATGC | 1 cut(s) | 836 |
| Sse9I | AATT | 3 cut(s) | 270, 554, 825 |
| SsiI | CCGC | 4 cut(s) | 41, 378, 567, 667 |
| SspMI | CTAG | 3 cut(s) | 683, 900, 1062 |
| StyD4I | CCNGG | 3 cut(s) | 535, 675, 1108 |
| StyI | CCWWGG | 3 cut(s) | 620, 714, 1119 |
| TaaI | ACNGT | 5 cut(s) | 363, 604, 785, 928, 1021 |
| TaiI | ACGT | 1 cut(s) | 130 |
| TaqI | TCGA | 1 cut(s) | 338 |
| TasI | AATT | 3 cut(s) | 270, 554, 825 |
| TatI | WGTACW | 2 cut(s) | 763, 1168 |
| TauI | GCSGC | 2 cut(s) | 570, 669 |
| TscAI | CASTG | 1 cut(s) | 289 |
| TseI | GCWGC | 5 cut(s) | 43, 371, 391, 638, 954 |
| TspDTI | ATGAA | 1 cut(s) | 1120 |
| TspRI | CASTG | 1 cut(s) | 289 |
| VpaK11BI | GGWCC | 2 cut(s) | 68, 812 |
| XceI | RCATGY | 3 cut(s) | 415, 544, 836 |
| XmiI | GTMKAC | 1 cut(s) | 1052 |
| XspI | CTAG | 3 cut(s) | 683, 900, 1062 |
| Zsp2I | ATGCAT | 1 cut(s) | 838 |