Rmu_sc0000613.1_g000028

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000613.1
OG0000053
Physical Location & Seq
Reverse (-)
91899 .. 94747
2849 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000613.1_g000028.1.cds

Sequence Viewer

Length: 1053 bp
atggctggtgaaacagacacgtacttcaataacttgaaggacaacgatggaaaattcaaggaatcacttgtctgtgatacaaaaggactactaggcttgtacgaagccacacatcttcggatacatggtgacaatatacttgatgaggcactaaacttcaccacaactaatcttgagtctgcaacacaccgcggtttaagctccccacttttgaaacaagtaactcacgccttgtatcagcctctttggaagggcctgccaaggatagaagcgaggcattacttgtctacctaccaagaagacgattctcataatgaaactctcctgaatttcgcacggctggatttcaacctactgcaacaattccataaaaaagaactatgtgaaattacaaggtggtggaagactttggacttcgtgatcaagaacttatcttttgcaagagatagggtggttgagtgctacttttgggctttgggaatcttctttgagccagaatattactttgctaggagagcattaagcaaagttatttgcatggtaaccctaattgatgacatctacgatgtttatggcacacctgaagaactagagctctttaatgaagctattcagaggtgggacatctctgccatagatcaattgccagactatatgaaagtttgttatcaggcactattagatgtctacacagaaattgaagaaaagcttgcaagcgagggaaacttgtatggcattcaccatgcaagagaatctttggaacaaaagagacagcattctgcttcagctgtggaattatacatgaaagaacatggtgctacagaagaagaagccatagtggaactaactaatcaagtgaatgacgcatggaaggttataaacaaagcatgcctccaccctacccgaatcccattgtcggttctaatgcgacctctcaaccatgcacgtttgtgtgaagttatctacaagtatgaagatgcctttacaaacgctggggatgagctcaagggttttgtgacttctctgcttatcgaacctgttcctactgcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

350

Amino Acids

40.51

Weight (kDa)

5.11

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 878
AccI GTMKAC 2 cut(s) 287, 687
AccII CGCG 1 cut(s) 192
AciI CCGC 2 cut(s) 190, 192
AcsI RAATTY 2 cut(s) 53, 328
AcuI CTGAAG 2 cut(s) 603, 768
AfaI GTAC 2 cut(s) 23, 101
AfiI CCNNNNNNNGG 1 cut(s) 916
AflIII ACRYGT 1 cut(s) 18
AgsI TTSAA 6 cut(s) 28, 37, 58, 214, 349, 701
AleI CACNNNNGTG 1 cut(s) 949
AluBI AGCT 6 cut(s) 201, 595, 608, 709, 788, 1003
AluI AGCT 6 cut(s) 201, 595, 608, 709, 788, 1003
Alw21I GWGCWC 2 cut(s) 597, 1005
Alw26I GTCTC 1 cut(s) 763
AoxI GGCC 1 cut(s) 253
ApoI RAATTY 2 cut(s) 53, 328
Asp700I GAANNNNTTC 2 cut(s) 609, 1038
AspS9I GGNCC 1 cut(s) 253
AsuHPI GGTGA 4 cut(s) 20, 140, 151, 731
BanII GRGCYC 2 cut(s) 597, 1005
BbsI GAAGAC 2 cut(s) 306, 410
Bbv12I GWGCWC 2 cut(s) 597, 1005
BccI CCATC 1 cut(s) 41
BceAI ACGGC 1 cut(s) 353
BciVI GTATCC 1 cut(s) 114
BclI TGATCA 1 cut(s) 420
BcoDI GTCTC 1 cut(s) 763
BfaI CTAG 3 cut(s) 92, 510, 590
BfmI CTRYAG 1 cut(s) 819
BfuI GTATCC 1 cut(s) 114
BmgT120I GGNCC 1 cut(s) 253
BmsI GCATC 1 cut(s) 967
BpiI GAAGAC 2 cut(s) 306, 410
BpuEI CTTGAG 2 cut(s) 194, 989
BsaAI YACGTR 1 cut(s) 21
BsaJI CCNNGG 2 cut(s) 190, 260
Bsc4I CCNNNNNNNGG 1 cut(s) 916
BseDI CCNNGG 2 cut(s) 190, 260
BseGI GGATG 1 cut(s) 1003
BseLI CCNNNNNNNGG 1 cut(s) 916
BseYI CCCAGC 1 cut(s) 992
Bsh1236I CGCG 1 cut(s) 192
BshFI GGCC 1 cut(s) 255
BsiHKAI GWGCWC 2 cut(s) 597, 1005
BslFI GGGAC 1 cut(s) 635
BslI CCNNNNNNNGG 1 cut(s) 916
BsmAI GTCTC 1 cut(s) 763
BsmFI GGGAC 1 cut(s) 635
BsmI GAATGC 2 cut(s) 735, 775
BsnI GGCC 1 cut(s) 255
Bsp1286I GDGCHC 2 cut(s) 597, 1005
Bsp143I GATC 2 cut(s) 420, 637
BspACI CCGC 2 cut(s) 190, 192
BspANI GGCC 1 cut(s) 255
BspFNI CGCG 1 cut(s) 192
BssECI CCNNGG 2 cut(s) 190, 260
BssMI GATC 2 cut(s) 420, 637
BssT1I CCWWGG 1 cut(s) 260
BstBAI YACGTR 1 cut(s) 21
BstC8I GCNNGC 4 cut(s) 257, 711, 715, 889
BstDSI CCRYGG 1 cut(s) 190
BstEII GGTNACC 1 cut(s) 541
BstF5I GGATG 1 cut(s) 1003
BstFNI CGCG 1 cut(s) 192
BstKTI GATC 2 cut(s) 423, 640
BstMAI GTCTC 1 cut(s) 763
BstMBI GATC 2 cut(s) 420, 637
BstMWI GCNNNNNNNGC 2 cut(s) 198, 515
BstNSI RCATGY 1 cut(s) 891
BstPI GGTNACC 1 cut(s) 541
BstSFI CTRYAG 1 cut(s) 819
BstUI CGCG 1 cut(s) 192
BstV2I GAAGAC 2 cut(s) 306, 410
BsuI GTATCC 1 cut(s) 114
BsuRI GGCC 1 cut(s) 255
BtgI CCRYGG 1 cut(s) 190
BtsCI GGATG 1 cut(s) 1003
Cac8I GCNNGC 4 cut(s) 257, 711, 715, 889
Cfr13I GGNCC 1 cut(s) 253
Cfr42I CCGCGG 1 cut(s) 193
CseI GACGC 1 cut(s) 872
Csp6I GTAC 2 cut(s) 22, 100
CviAII CATG 8 cut(s) 125, 538, 743, 802, 812, 867, 888, 941
CviQI GTAC 2 cut(s) 22, 100
DpnI GATC 2 cut(s) 422, 639
DpnII GATC 2 cut(s) 420, 637
Ecl136II GAGCTC 2 cut(s) 595, 1003
Eco130I CCWWGG 1 cut(s) 260
Eco24I GRGCYC 2 cut(s) 597, 1005
Eco53kI GAGCTC 2 cut(s) 595, 1003
Eco57I CTGAAG 2 cut(s) 603, 768
Eco91I GGTNACC 1 cut(s) 541
EcoICRI GAGCTC 2 cut(s) 595, 1003
EcoO109I RGGNCCY 1 cut(s) 253
EcoO65I GGTNACC 1 cut(s) 541
EcoT14I CCWWGG 1 cut(s) 260
EcoT38I GRGCYC 2 cut(s) 597, 1005
ErhI CCWWGG 1 cut(s) 260
FaeI CATG 8 cut(s) 128, 541, 746, 805, 815, 870, 891, 944
FalI AAGNNNNNCTT 4 cut(s) 693, 725, 739, 771
FaqI GGGAC 1 cut(s) 635
FatI CATG 8 cut(s) 124, 537, 742, 801, 811, 866, 887, 940
FbaI TGATCA 1 cut(s) 420
FblI GTMKAC 2 cut(s) 287, 687
FokI GGATG 1 cut(s) 1010
FriOI GRGCYC 2 cut(s) 597, 1005
FspBI CTAG 3 cut(s) 92, 510, 590
GsaI CCCAGC 1 cut(s) 996
HaeIII GGCC 1 cut(s) 255
HgaI GACGC 1 cut(s) 872
Hin1II CATG 8 cut(s) 128, 541, 746, 805, 815, 870, 891, 944
HindIII AAGCTT 1 cut(s) 707
HinfI GANTC 6 cut(s) 62, 176, 305, 480, 752, 906
HphI GGTGA 4 cut(s) 20, 140, 151, 731
Hpy166II GTNNAC 2 cut(s) 288, 688
Hpy188I TCNGA 2 cut(s) 120, 615
Hpy188III TCNNGA 4 cut(s) 173, 325, 418, 424
Hpy8I GTNNAC 2 cut(s) 288, 688
HpyAV CCTTC 3 cut(s) 31, 244, 865
HpyCH4IV ACGT 2 cut(s) 20, 946
HpyCH4V TGCA 8 cut(s) 182, 358, 440, 537, 713, 746, 944, 1049
HpyF10VI GCNNNNNNNGC 2 cut(s) 198, 515
HpySE526I ACGT 2 cut(s) 20, 946
Hsp92II CATG 8 cut(s) 128, 541, 746, 805, 815, 870, 891, 944
Ksp22I TGATCA 1 cut(s) 420
KspI CCGCGG 1 cut(s) 193
Kzo9I GATC 2 cut(s) 420, 637
LmnI GCTCC 1 cut(s) 206
LpnPI CCDG 8 cut(s) 269, 326, 338, 507, 594, 656, 660, 978
LweI GCATC 1 cut(s) 967
MaeI CTAG 3 cut(s) 92, 510, 590
MaeII ACGT 2 cut(s) 20, 946
MaeIII GTNAC 4 cut(s) 128, 220, 541, 1015
MalI GATC 2 cut(s) 422, 639
MboI GATC 2 cut(s) 420, 637
MboII GAAGA 9 cut(s) 107, 311, 415, 475, 596, 713, 836, 839, 986
MfeI CAATTG 1 cut(s) 641
MhlI GDGCHC 2 cut(s) 597, 1005
MluCI AATT 8 cut(s) 53, 328, 362, 387, 549, 641, 696, 794
MlyI GAGTC 1 cut(s) 185
MnlI CCTC 7 cut(s) 139, 252, 267, 609, 712, 902, 942
MroXI GAANNNNTTC 2 cut(s) 609, 1038
MseI TTAA 3 cut(s) 197, 521, 600
MslI CAYNNNNRTG 1 cut(s) 949
MspA1I CMGCKG 2 cut(s) 192, 788
MunI CAATTG 1 cut(s) 641
Mva1269I GAATGC 2 cut(s) 735, 775
MvnI CGCG 1 cut(s) 192
MwoI GCNNNNNNNGC 2 cut(s) 198, 515
NdeII GATC 2 cut(s) 420, 637
NlaIII CATG 8 cut(s) 128, 541, 746, 805, 815, 870, 891, 944
NmuCI GTSAC 2 cut(s) 128, 1015
NspI RCATGY 1 cut(s) 891
OliI CACNNNNGTG 1 cut(s) 949
PaeI GCATGC 1 cut(s) 891
PctI GAATGC 2 cut(s) 735, 775
PdmI GAANNNNTTC 2 cut(s) 609, 1038
PfeI GAWTC 5 cut(s) 62, 305, 480, 752, 906
PleI GAGTC 1 cut(s) 184
PpsI GAGTC 1 cut(s) 184
Ppu21I YACGTR 1 cut(s) 21
PsiI TTATAA 1 cut(s) 878
Psp124BI GAGCTC 2 cut(s) 597, 1005
PspEI GGTNACC 1 cut(s) 541
PspFI CCCAGC 1 cut(s) 992
PspPI GGNCC 1 cut(s) 253
PvuII CAGCTG 1 cut(s) 788
RsaI GTAC 2 cut(s) 23, 101
RsaNI GTAC 2 cut(s) 22, 100
RseI CAYNNNNRTG 1 cut(s) 949
SacI GAGCTC 2 cut(s) 597, 1005
SacII CCGCGG 1 cut(s) 193
SaqAI TTAA 3 cut(s) 197, 521, 600
Sau3AI GATC 2 cut(s) 420, 637
Sau96I GGNCC 1 cut(s) 253
SchI GAGTC 1 cut(s) 185
SduI GDGCHC 2 cut(s) 597, 1005
SfaNI GCATC 1 cut(s) 967
SfcI CTRYAG 1 cut(s) 819
Sfr303I CCGCGG 1 cut(s) 193
SgrBI CCGCGG 1 cut(s) 193
SmiMI CAYNNNNRTG 1 cut(s) 949
SmlI CTYRAG 2 cut(s) 173, 1004
SmoI CTYRAG 2 cut(s) 173, 1004
SphI GCATGC 1 cut(s) 891
Sse9I AATT 8 cut(s) 53, 328, 362, 387, 549, 641, 696, 794
SsiI CCGC 2 cut(s) 190, 192
SspI AATATT 1 cut(s) 500
SspMI CTAG 3 cut(s) 92, 510, 590
SstI GAGCTC 2 cut(s) 597, 1005
StyI CCWWGG 1 cut(s) 260
TaiI ACGT 2 cut(s) 23, 949
TaqI TCGA 1 cut(s) 1032
TasI AATT 8 cut(s) 53, 328, 362, 387, 549, 641, 696, 794
TfiI GAWTC 5 cut(s) 62, 305, 480, 752, 906
Tru1I TTAA 3 cut(s) 197, 521, 600
Tru9I TTAA 3 cut(s) 197, 521, 600
TseFI GTSAC 2 cut(s) 128, 1015
Tsp45I GTSAC 2 cut(s) 128, 1015
TspDTI ATGAA 5 cut(s) 330, 618, 671, 818, 987
XapI RAATTY 2 cut(s) 53, 328
XceI RCATGY 1 cut(s) 891
XmiI GTMKAC 2 cut(s) 287, 687
XmnI GAANNNNTTC 2 cut(s) 609, 1038
XspI CTAG 3 cut(s) 92, 510, 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.