Rmu_sc0006021.1_g000024

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006021.1
OG0000053
Physical Location & Seq
Forward (+)
92945 .. 97997
5053 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006021.1_g000024.1.cds

Sequence Viewer

Length: 1290 bp
atggtggtgattcatcgtggggagccccgtagacgacgctacaaggccgagaagttgcacggtgaagctgcagatcgcctcaaatcgccggccttggttctcccatctccggccactatagctcgagaaactgcaagcgatgaaaacgagcaacgggtccaagaattgaaggaagaagtgaagaggatgcttataatggctccaacttcacaagaattaaatttaattgatgaaattcaacgcttcggagtgtcctaccattttgaaaatgagattcaccaaatgctccagaaaattcacaactcttcccatgatgaccaagaaaataatgatgatgatgagctttacacaatagctctacgttttcgattgcttagacaacaaggttttgaggtttcatgcaagatgttcagcaagttcatcgacgttgatgggaaatttaagagatcactcgtcactgatgtggaaggaattttaagcttgtatgaagccacacatcttaggacacacggagaggatatactagaagccgccctggccttcactaccactcatcttgagttggcagtaactgccaggggcggacctatgttggggtgggacatctctgcattggatctactacctgcagattacatgaaaatctgttaccaggcactcttggacatctacgctgatattgaaaatgagcttgcgaaggaggggaagttgtatcgcatccactatgccagagaatcaatgaaagttcaagtcagatcttggtttcaagaagccaaatggttccatgagaaatacactccaacgttggatgaatatatgtcagccgctctttccacaacctatttcatgatggcaaccacatcctttgttttaatggccggagatattgtcacaaaaaattccttggactgggtgttcaccgacccaaagatggtaaaggcttcatcaacaataggcagactcatggatgacttgcaatcacacaagtttgagcaaaagagaggacatgttgcctcagctattgaatgctacatgaaagaacattgtgccacagaagaagaagcaacaatcgaacttactaaacaagtgaataatgcatggaaagacatgaatgaaggatggctcaactccgccggtgctgctaatgtccctaggccactattactgcgcattatcaacctttcacgtgtgatcgaagttatatataagcatgaagatggattcactcatgctgaaactgggcttaaggatattataacgtgtctgcttgtcgaacctgtacctatataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

429

Amino Acids

49.17

Weight (kDa)

5.51

Isoelectric Point (pI)

51.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 194, 1256
Acc16I TGCGCA 1 cut(s) 1169
Acc36I ACCTGC 1 cut(s) 634
AccBSI CCGCTC 1 cut(s) 827
AccI GTMKAC 1 cut(s) 31
AciI CCGC 4 cut(s) 531, 582, 825, 1131
AclI AACGTT 1 cut(s) 803
AclWI GGATC 1 cut(s) 624
AcoI YGGCCR 2 cut(s) 111, 876
AcsI RAATTY 6 cut(s) 220, 234, 294, 437, 471, 898
AcvI CACGTG 1 cut(s) 1187
AfaI GTAC 1 cut(s) 1281
AfiI CCNNNNNNNGG 4 cut(s) 109, 593, 909, 931
AflII CTTAAG 1 cut(s) 1244
AflIII ACRYGT 3 cut(s) 1006, 1186, 1259
AgsI TTSAA 7 cut(s) 169, 239, 266, 683, 749, 767, 1025
AjnI CCWGG 3 cut(s) 534, 575, 651
AleI CACNNNNGTG 1 cut(s) 461
AloI GAACNNNNNNTCC 2 cut(s) 899, 931
AluBI AGCT 7 cut(s) 68, 122, 343, 356, 480, 691, 1019
AluI AGCT 7 cut(s) 68, 122, 343, 356, 480, 691, 1019
AlwI GGATC 1 cut(s) 624
AlwNI CAGNNNCTG 1 cut(s) 572
Ama87I CYCGRG 1 cut(s) 123
AoxI GGCC 6 cut(s) 45, 90, 111, 537, 876, 1154
ApeKI GCWGC 2 cut(s) 68, 1139
ApoI RAATTY 6 cut(s) 220, 234, 294, 437, 471, 898
AspA2I CCTAGG 1 cut(s) 1151
AspLEI GCGC 1 cut(s) 1170
AspS9I GGNCC 2 cut(s) 157, 584
AsuHPI GGTGA 4 cut(s) 19, 74, 269, 910
AvaI CYCGRG 1 cut(s) 123
AvaII GGWCC 2 cut(s) 157, 584
AvrII CCTAGG 1 cut(s) 1151
BanII GRGCYC 1 cut(s) 27
BbrPI CACGTG 1 cut(s) 1187
BbvCI CCTCAGC 1 cut(s) 1015
BbvI GCAGC 2 cut(s) 55, 1126
BccI CCATC 6 cut(s) 112, 425, 844, 925, 1113, 1211
BcgI CGANNNNNNTGC 2 cut(s) 403, 437
BciT130I CCWGG 3 cut(s) 536, 577, 653
BfaI CTAG 2 cut(s) 524, 1152
BfmI CTRYAG 3 cut(s) 69, 117, 627
BfrI CTTAAG 1 cut(s) 1244
BfuAI ACCTGC 1 cut(s) 634
BglI GCCNNNNNGGC 1 cut(s) 536
BglII AGATCT 1 cut(s) 755
BisI GCNGC 4 cut(s) 69, 531, 825, 1140
BlnI CCTAGG 1 cut(s) 1151
BlsI GCNGC 4 cut(s) 70, 532, 826, 1141
Bme1390I CCNGG 3 cut(s) 536, 577, 653
Bme18I GGWCC 2 cut(s) 157, 584
BmeT110I CYCGRG 1 cut(s) 123
BmgT120I GGNCC 2 cut(s) 157, 584
BmiI GGNNCC 4 cut(s) 24, 158, 201, 782
BmrFI CCNGG 3 cut(s) 536, 577, 653
BmrI ACTGGG 2 cut(s) 919, 1248
BmsI GCATC 2 cut(s) 177, 726
BmuI ACTGGG 2 cut(s) 919, 1248
BpmI CTGGAG 1 cut(s) 272
Bpu10I CCTNAGC 1 cut(s) 1015
BpuEI CTTGAG 1 cut(s) 578
BsaAI YACGTR 1 cut(s) 1187
BsaJI CCNNGG 5 cut(s) 93, 534, 576, 903, 1151
BsaXI ACNNNNNCTCC 4 cut(s) 692, 722, 873, 903
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 593, 909, 931
Bse118I RCCGGY 2 cut(s) 88, 1133
Bse1I ACTGG 2 cut(s) 914, 1243
BseBI CCWGG 3 cut(s) 536, 577, 653
BseDI CCNNGG 5 cut(s) 93, 534, 576, 903, 1151
BseGI GGATG 6 cut(s) 192, 717, 814, 860, 973, 1124
BseLI CCNNNNNNNGG 4 cut(s) 109, 593, 909, 931
BseMII CTCAG 1 cut(s) 1029
BseNI ACTGG 2 cut(s) 914, 1243
BseXI GCAGC 2 cut(s) 55, 1126
BshFI GGCC 6 cut(s) 47, 92, 113, 539, 878, 1156
BsiHKCI CYCGRG 1 cut(s) 123
BsiSI CCGG 4 cut(s) 89, 110, 879, 1134
BslFI GGGAC 2 cut(s) 614, 1133
BslI CCNNNNNNNGG 4 cut(s) 109, 593, 909, 931
BsmFI GGGAC 2 cut(s) 614, 1133
BsmI GAATGC 1 cut(s) 1031
BsnI GGCC 6 cut(s) 47, 92, 113, 539, 878, 1156
BsoBI CYCGRG 1 cut(s) 123
Bsp1286I GDGCHC 1 cut(s) 27
Bsp143I GATC 5 cut(s) 73, 446, 616, 755, 1191
BspACI CCGC 4 cut(s) 531, 582, 825, 1131
BspANI GGCC 6 cut(s) 47, 92, 113, 539, 878, 1156
BspCNI CTCAG 1 cut(s) 1028
BspHI TCATGA 1 cut(s) 846
BspLI GGNNCC 4 cut(s) 24, 158, 201, 782
BspMAI CTGCAG 2 cut(s) 73, 631
BspMI ACCTGC 1 cut(s) 634
BspPI GGATC 1 cut(s) 624
BspTI CTTAAG 1 cut(s) 1244
BsrBI CCGCTC 1 cut(s) 827
BsrFI RCCGGY 2 cut(s) 88, 1133
BsrI ACTGG 2 cut(s) 914, 1243
BssAI RCCGGY 2 cut(s) 88, 1133
BssECI CCNNGG 5 cut(s) 93, 534, 576, 903, 1151
BssMI GATC 5 cut(s) 73, 446, 616, 755, 1191
BssT1I CCWWGG 3 cut(s) 93, 903, 1151
Bst2UI CCWGG 3 cut(s) 536, 577, 653
Bst4CI ACNGT 1 cut(s) 62
Bst6I CTCTTC 2 cut(s) 176, 310
BstAFI CTTAAG 1 cut(s) 1244
BstAPI GCANNNNNTGC 1 cut(s) 572
BstBAI YACGTR 1 cut(s) 1187
BstC8I GCNNGC 3 cut(s) 90, 136, 693
BstDEI CTNAG 3 cut(s) 374, 500, 1015
BstF5I GGATG 6 cut(s) 192, 717, 814, 860, 973, 1124
BstHHI GCGC 1 cut(s) 1170
BstKTI GATC 5 cut(s) 76, 449, 619, 758, 1194
BstMBI GATC 5 cut(s) 73, 446, 616, 755, 1191
BstMWI GCNNNNNNNGC 4 cut(s) 119, 536, 572, 1139
BstNI CCWGG 3 cut(s) 536, 577, 653
BstNSI RCATGY 1 cut(s) 1010
BstSCI CCNGG 3 cut(s) 534, 575, 651
BstSFI CTRYAG 3 cut(s) 69, 117, 627
BstV1I GCAGC 2 cut(s) 55, 1126
BstX2I RGATCY 2 cut(s) 616, 755
BstYI RGATCY 2 cut(s) 616, 755
BsuRI GGCC 6 cut(s) 47, 92, 113, 539, 878, 1156
BtgZI GCGATG 1 cut(s) 153
BtsCI GGATG 6 cut(s) 192, 717, 814, 860, 973, 1124
BtsIMutI CAGTG 1 cut(s) 456
BveI ACCTGC 1 cut(s) 634
Cac8I GCNNGC 3 cut(s) 90, 136, 693
CaiI CAGNNNCTG 1 cut(s) 572
CciI TCATGA 1 cut(s) 846
CfoI GCGC 1 cut(s) 1170
Cfr10I RCCGGY 2 cut(s) 88, 1133
Cfr13I GGNCC 2 cut(s) 157, 584
CseI GACGC 1 cut(s) 45
Csp6I GTAC 1 cut(s) 1280
CspCI CAANNNNNGTGG 4 cut(s) 538, 573, 847, 882
CviQI GTAC 1 cut(s) 1280
DdeI CTNAG 3 cut(s) 374, 500, 1015
DpnI GATC 5 cut(s) 75, 448, 618, 757, 1193
DpnII GATC 5 cut(s) 73, 446, 616, 755, 1191
EaeI YGGCCR 2 cut(s) 111, 876
Eam1104I CTCTTC 2 cut(s) 176, 310
EarI CTCTTC 2 cut(s) 176, 310
EciI GGCGGA 2 cut(s) 597, 1120
Eco130I CCWWGG 3 cut(s) 93, 903, 1151
Eco24I GRGCYC 1 cut(s) 27
Eco47I GGWCC 2 cut(s) 157, 584
Eco72I CACGTG 1 cut(s) 1187
Eco88I CYCGRG 1 cut(s) 123
EcoRII CCWGG 3 cut(s) 534, 575, 651
EcoT14I CCWWGG 3 cut(s) 93, 903, 1151
EcoT22I ATGCAT 1 cut(s) 1099
EcoT38I GRGCYC 1 cut(s) 27
ErhI CCWWGG 3 cut(s) 93, 903, 1151
FaqI GGGAC 2 cut(s) 614, 1133
FblI GTMKAC 1 cut(s) 31
Fnu4HI GCNGC 4 cut(s) 69, 531, 825, 1140
FokI GGATG 6 cut(s) 199, 704, 821, 847, 980, 1131
FriOI GRGCYC 1 cut(s) 27
Fsp4HI GCNGC 4 cut(s) 69, 531, 825, 1140
FspBI CTAG 2 cut(s) 524, 1152
FspI TGCGCA 1 cut(s) 1169
GlaI GCGC 1 cut(s) 1169
GluI GCNGC 4 cut(s) 69, 531, 825, 1140
GsuI CTGGAG 1 cut(s) 272
HaeIII GGCC 6 cut(s) 47, 92, 113, 539, 878, 1156
HapII CCGG 4 cut(s) 89, 110, 879, 1134
HgaI GACGC 1 cut(s) 45
HhaI GCGC 1 cut(s) 1170
Hin6I GCGC 1 cut(s) 1168
HinP1I GCGC 1 cut(s) 1168
HindIII AAGCTT 1 cut(s) 478
HinfI GANTC 5 cut(s) 10, 274, 734, 960, 1221
HpaII CCGG 4 cut(s) 89, 110, 879, 1134
HphI GGTGA 4 cut(s) 19, 74, 269, 910
Hpy166II GTNNAC 2 cut(s) 32, 918
Hpy188I TCNGA 2 cut(s) 248, 755
Hpy188III TCNNGA 5 cut(s) 125, 289, 557, 767, 847
Hpy8I GTNNAC 2 cut(s) 32, 918
Hpy99I CGWCG 2 cut(s) 39, 428
HpyAV CCTTC 5 cut(s) 163, 461, 550, 691, 1109
HpyCH4III ACNGT 1 cut(s) 62
HpyCH4IV ACGT 5 cut(s) 361, 426, 803, 1186, 1259
HpyCH4V TGCA 8 cut(s) 58, 71, 134, 402, 611, 629, 976, 1097
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 536, 572, 1139
HpyF3I CTNAG 3 cut(s) 374, 500, 1015
HpySE526I ACGT 5 cut(s) 361, 426, 803, 1186, 1259
HspAI GCGC 1 cut(s) 1168
KroI GCCGGC 1 cut(s) 88
KroNI GCCGGC 1 cut(s) 90
Kzo9I GATC 5 cut(s) 73, 446, 616, 755, 1191
LmnI GCTCC 3 cut(s) 22, 205, 291
Lsp1109I GCAGC 2 cut(s) 55, 1126
LweI GCATC 2 cut(s) 177, 726
MaeI CTAG 2 cut(s) 524, 1152
MaeII ACGT 5 cut(s) 361, 426, 803, 1186, 1259
MaeIII GTNAC 4 cut(s) 454, 568, 647, 889
MalI GATC 5 cut(s) 75, 448, 618, 757, 1193
MbiI CCGCTC 1 cut(s) 827
MboI GATC 5 cut(s) 73, 446, 616, 755, 1191
MboII GAAGA 6 cut(s) 185, 193, 297, 1067, 1070, 1226
MflI RGATCY 2 cut(s) 616, 755
MhlI GDGCHC 1 cut(s) 27
MluCI AATT 9 cut(s) 164, 215, 220, 225, 234, 294, 437, 471, 898
MlyI GAGTC 1 cut(s) 954
MmeI TCCRAC 3 cut(s) 227, 786, 824
MnlI CCTC 7 cut(s) 89, 177, 385, 508, 694, 995, 1024
Mph1103I ATGCAT 1 cut(s) 1099
MroNI GCCGGC 1 cut(s) 88
MseI TTAA 6 cut(s) 218, 224, 441, 476, 872, 1245
MslI CAYNNNNRTG 2 cut(s) 461, 1215
MspCI CTTAAG 1 cut(s) 1244
MspI CCGG 4 cut(s) 89, 110, 879, 1134
MspR9I CCNGG 3 cut(s) 536, 577, 653
Mva1269I GAATGC 1 cut(s) 1031
MvaI CCWGG 3 cut(s) 536, 577, 653
MwoI GCNNNNNNNGC 4 cut(s) 119, 536, 572, 1139
NaeI GCCGGC 1 cut(s) 90
NdeII GATC 5 cut(s) 73, 446, 616, 755, 1191
NgoMIV GCCGGC 1 cut(s) 88
NlaIV GGNNCC 4 cut(s) 24, 158, 201, 782
NmeAIII GCCGAG 1 cut(s) 73
NmuCI GTSAC 2 cut(s) 454, 889
NsbI TGCGCA 1 cut(s) 1169
NsiI ATGCAT 1 cut(s) 1099
NspI RCATGY 1 cut(s) 1010
OliI CACNNNNGTG 1 cut(s) 461
PaeR7I CTCGAG 1 cut(s) 123
PagI TCATGA 1 cut(s) 846
PciI ACATGT 1 cut(s) 1006
PctI GAATGC 1 cut(s) 1031
PdiI GCCGGC 1 cut(s) 90
PfeI GAWTC 4 cut(s) 10, 274, 734, 1221
PkrI GCNGC 4 cut(s) 70, 532, 826, 1141
PleI GAGTC 1 cut(s) 954
PmaCI CACGTG 1 cut(s) 1187
PmlI CACGTG 1 cut(s) 1187
PpsI GAGTC 1 cut(s) 954
Ppu21I YACGTR 1 cut(s) 1187
PscI ACATGT 1 cut(s) 1006
PsiI TTATAA 2 cut(s) 194, 1256
Psp1406I AACGTT 1 cut(s) 803
Psp6I CCWGG 3 cut(s) 534, 575, 651
PspCI CACGTG 1 cut(s) 1187
PspGI CCWGG 3 cut(s) 534, 575, 651
PspN4I GGNNCC 4 cut(s) 24, 158, 201, 782
PspPI GGNCC 2 cut(s) 157, 584
PstI CTGCAG 2 cut(s) 73, 631
PstNI CAGNNNCTG 1 cut(s) 572
PsuI RGATCY 2 cut(s) 616, 755
RsaI GTAC 1 cut(s) 1281
RsaNI GTAC 1 cut(s) 1280
RseI CAYNNNNRTG 2 cut(s) 461, 1215
SaqAI TTAA 6 cut(s) 218, 224, 441, 476, 872, 1245
SatI GCNGC 4 cut(s) 69, 531, 825, 1140
Sau3AI GATC 5 cut(s) 73, 446, 616, 755, 1191
Sau96I GGNCC 2 cut(s) 157, 584
SchI GAGTC 1 cut(s) 954
ScrFI CCNGG 3 cut(s) 536, 577, 653
SduI GDGCHC 1 cut(s) 27
SfaNI GCATC 2 cut(s) 177, 726
SfcI CTRYAG 3 cut(s) 69, 117, 627
Sfr274I CTCGAG 1 cut(s) 123
SgrAI CRCCGGYG 1 cut(s) 1133
SinI GGWCC 2 cut(s) 157, 584
SlaI CTCGAG 1 cut(s) 123
SmiMI CAYNNNNRTG 2 cut(s) 461, 1215
SmlI CTYRAG 3 cut(s) 123, 557, 1244
SmoI CTYRAG 3 cut(s) 123, 557, 1244
Sse9I AATT 9 cut(s) 164, 215, 220, 225, 234, 294, 437, 471, 898
SsiI CCGC 4 cut(s) 531, 582, 825, 1131
SspMI CTAG 2 cut(s) 524, 1152
StyD4I CCNGG 3 cut(s) 534, 575, 651
StyI CCWWGG 3 cut(s) 93, 903, 1151
TaaI ACNGT 1 cut(s) 62
TaiI ACGT 5 cut(s) 364, 429, 806, 1189, 1262
TaqI TCGA 6 cut(s) 124, 367, 423, 1071, 1194, 1272
TasI AATT 9 cut(s) 164, 215, 220, 225, 234, 294, 437, 471, 898
TauI GCSGC 2 cut(s) 533, 827
TfiI GAWTC 4 cut(s) 10, 274, 734, 1221
Tru1I TTAA 6 cut(s) 218, 224, 441, 476, 872, 1245
Tru9I TTAA 6 cut(s) 218, 224, 441, 476, 872, 1245
TscAI CASTG 1 cut(s) 463
TseFI GTSAC 2 cut(s) 454, 889
TseI GCWGC 2 cut(s) 68, 1139
Tsp45I GTSAC 2 cut(s) 454, 889
TspGWI ACGGA 1 cut(s) 525
TspRI CASTG 1 cut(s) 463
Vha464I CTTAAG 1 cut(s) 1244
VpaK11BI GGWCC 2 cut(s) 157, 584
XapI RAATTY 6 cut(s) 220, 234, 294, 437, 471, 898
XceI RCATGY 1 cut(s) 1010
XhoI CTCGAG 1 cut(s) 123
XmaJI CCTAGG 1 cut(s) 1151
XmiI GTMKAC 1 cut(s) 31
XspI CTAG 2 cut(s) 524, 1152
Zsp2I ATGCAT 1 cut(s) 1099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.