RchiOBHm_Chr6g0274871

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000053
Physical Location & Seq
Reverse (-)
36455570 .. 36458314
2745 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24661

Sequence Viewer

Length: 1662 bp
ATGTCATTCCAAATCTCAGCAGCTCAATCCAAACCGAAACGAAGCCGTCCAACAACAGACTATGTTCCAAGCCCTTGGGGAGACCGCTTCATTAACTATGATTCCGAAGACACTATTACCAATGCACGTAGAGAGAAAGAAATTGGAGAACTTAAAGAAGTGGTGAGAATGGATTTCTTAGCAGCGGCTACAGGTCATGATATTTCTGCAAAACTAAAGTTGATCGAAGCAGTTGAGCGCCTAGGTCTGGCTTACCACTTTGAAACAGAGATAGAAGAAGCACTGGAGCGCATATATGCTACTACCGGCTATAAGTCTCATGAGGATGGTGATCTTCACAATGTCACCCTGCGATTTCGGTTGCTTAGACAACATGGATACAATGTCTCAACTGAAATGTTTAACAAGTTCAGAGATGACAAAGGCAACTTCAAGGAAAGCTTGATTACTGACATACAGGGCTTGATAAGTTTGTACGAAGCCGCACATCTTGCAGTCCATGGGGAAGATATATTAGATGAAGCTCTGGCTTTCACTACTGCTCATCTTAATGCAATGGTAAACAACCCTAACTTGGCAGCAGAAGTAACTCATGTTTTGAAGCAACTACCATATAAGGGCATACCAAGGCTAGAGGCCAAGAAATACATCTCCATCTACCAGGATATGGCCTCCCATAACCCAGCTCTCTTAAAGCTTGCAAAGTTGGATTTCAATCTAGTGCAGTCATTGCACAAAAAGGAGCTTAGTATTGTTGCCAGGTGGTGGAAAGATTTAGGGTTTGCCACAAAGCTTACATTTGCAAGAGACAGACTTGTGGAGTGCTATTTTTGGTCTGTGGCAACTTATTTCGAACCCCAATACTTGCTTGCCAGAAGAATTGTAACAAAAGTCATTGCCATCACTGTTATCATCGATGATATCTATGATGCATACGGCACCATTGACGAACTCACTCTCTTCACTGAAGCAATTCAAAGGTGGGATATCAACTGCATGAATCAGCTTCCAGAAAAACTGCAACTCTGTTACAAGGCACTTATCGAGTTTTTTGAAGAAATTGAAGATGAAATGGCAAAGGAAGGAAGATCATACCGAGTTCATTATGCAAAAGAGACGATGAAAGCTCTATGCCGAGGTTACTTAAAAGAAGCTCAATGTTTCCATGAAGACTACATCCCAAGTGTGGAGGAGCATATGGAACTTGCACTTGTAACCTGCACCTATCCAATGCTTCTAACTCTAGCTTTAGTTGGCATGGGCGGCAATGTAACAAAGGAGACCTTTGAGTGGATGTCCCAGGGGCCTAAGATTCTTACAGCTTCAGCAACCATTTCGAGGTGCATGGACGACATTGTTGGACACAAGTTCGAACAAGAGAGGGGGCACGCAGCGTCAGGCGTTGAATGCTACATGAAACAGTATGGTGTGTCGGAAAAAGAAGCATGTGATGTGCTTCAAAAGAGAGTCGATAGTGCCTGGAAGGATATAAACTCAGAGATGCTGAAACCAACAGAAATGCCAATTCCAATCCTTCTACCGATTCTGAACTTTGCACGAGTCATGGATGTCCTCTACAAGGTGGAAGACAGCTTCACGCATGTCGCACAACCAGTAAAAGATGGCATTTCTTCATTACTGATAGACCCCGTTCAGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

553

Amino Acids

63.26

Weight (kDa)

5.49

Isoelectric Point (pI)

44.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 26 - 200 1.4e-56 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 257 - 496 2.9e-102 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 297 - 496 8.4e-63 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1226
AccB1I GGYRCC 1 cut(s) 938
AccB7I CCANNNNNTGG 2 cut(s) 667, 765
AciI CCGC 4 cut(s) 85, 185, 483, 1263
AcuI CTGAAG 2 cut(s) 987, 1308
AfaI GTAC 1 cut(s) 476
AfiI CCNNNNNNNGG 9 cut(s) 247, 574, 617, 667, 765, 1186, 1290, 1338, 1579
AgsI TTSAA 9 cut(s) 263, 433, 601, 715, 977, 1055, 1064, 1406, 1460
AjnI CCWGG 4 cut(s) 660, 758, 1299, 1478
Alw26I GTCTC 6 cut(s) 75, 321, 391, 801, 1109, 1274
AoxI GGCC 3 cut(s) 636, 669, 1304
ApeKI GCWGC 4 cut(s) 20, 182, 578, 1391
Asp700I GAANNNNTTC 1 cut(s) 972
AspA2I CCTAGG 1 cut(s) 241
AspLEI GCGC 2 cut(s) 240, 291
AspS9I GGNCC 1 cut(s) 1304
AsuHPI GGTGA 3 cut(s) 175, 337, 341
AsuII TTCGAA 2 cut(s) 852, 1371
AvrII CCTAGG 1 cut(s) 241
BaeGI GKGCMC 1 cut(s) 1389
BanI GGYRCC 1 cut(s) 938
BauI CACGAG 1 cut(s) 1557
BbsI GAAGAC 3 cut(s) 114, 1176, 1593
BbvI GCAGC 4 cut(s) 32, 194, 590, 1403
BccI CCATC 4 cut(s) 320, 662, 908, 1616
BceAI ACGGC 2 cut(s) 30, 952
BcgI CGANNNNNNTGC 2 cut(s) 1317, 1351
BciT130I CCWGG 4 cut(s) 662, 760, 1301, 1480
BciVI GTATCC 1 cut(s) 371
BcoDI GTCTC 6 cut(s) 75, 321, 391, 801, 1109, 1274
BfaI CTAG 4 cut(s) 242, 632, 719, 1244
BfmI CTRYAG 1 cut(s) 189
BfoI RGCGCY 1 cut(s) 241
BfuAI ACCTGC 1 cut(s) 1226
BfuI GTATCC 1 cut(s) 371
BisI GCNGC 7 cut(s) 21, 183, 186, 483, 579, 1264, 1392
BlnI CCTAGG 1 cut(s) 241
BlsI GCNGC 7 cut(s) 22, 184, 187, 484, 580, 1265, 1393
Bme1390I CCNGG 4 cut(s) 662, 760, 1301, 1480
BmgT120I GGNCC 1 cut(s) 1304
BmiI GGNNCC 2 cut(s) 940, 1305
BmrFI CCNGG 4 cut(s) 662, 760, 1301, 1480
BmsI GCATC 2 cut(s) 919, 1491
BpiI GAAGAC 3 cut(s) 114, 1176, 1593
BpmI CTGGAG 1 cut(s) 305
Bpu14I TTCGAA 2 cut(s) 852, 1371
Bsa29I ATCGAT 1 cut(s) 915
BsaAI YACGTR 1 cut(s) 128
BsaBI GATNNNNATC 2 cut(s) 330, 714
BsaI GGTCTC 2 cut(s) 75, 1274
BsaJI CCNNGG 7 cut(s) 74, 241, 499, 626, 1135, 1299, 1300
Bsc4I CCNNNNNNNGG 9 cut(s) 247, 574, 617, 667, 765, 1186, 1290, 1338, 1579
Bse118I RCCGGY 1 cut(s) 305
Bse1I ACTGG 2 cut(s) 288, 1613
Bse3DI GCAATG 4 cut(s) 561, 728, 894, 1273
Bse8I GATNNNNATC 2 cut(s) 330, 714
BseBI CCWGG 4 cut(s) 662, 760, 1301, 1480
BseCI ATCGAT 1 cut(s) 915
BseDI CCNNGG 7 cut(s) 74, 241, 499, 626, 1135, 1299, 1300
BseGI GGATG 4 cut(s) 331, 1176, 1299, 1573
BseJI GATNNNNATC 2 cut(s) 330, 714
BseLI CCNNNNNNNGG 9 cut(s) 247, 574, 617, 667, 765, 1186, 1290, 1338, 1579
BseMI GCAATG 4 cut(s) 561, 728, 894, 1273
BseMII CTCAG 2 cut(s) 30, 1509
BseNI ACTGG 2 cut(s) 288, 1613
BseRI GAGGAG 1 cut(s) 1205
BseSI GKGCMC 1 cut(s) 1389
BseXI GCAGC 4 cut(s) 32, 194, 590, 1403
BseYI CCCAGC 1 cut(s) 682
BsgI GTGCAG 2 cut(s) 743, 1204
BshFI GGCC 3 cut(s) 638, 671, 1306
BshNI GGYRCC 1 cut(s) 938
BshVI ATCGAT 1 cut(s) 915
BsiSI CCGG 1 cut(s) 306
BslFI GGGAC 1 cut(s) 1282
BslI CCNNNNNNNGG 9 cut(s) 247, 574, 617, 667, 765, 1186, 1290, 1338, 1579
BsmAI GTCTC 6 cut(s) 75, 321, 391, 801, 1109, 1274
BsmBI CGTCTC 1 cut(s) 1109
BsmFI GGGAC 1 cut(s) 1282
BsmI GAATGC 1 cut(s) 1412
BsnI GGCC 3 cut(s) 638, 671, 1306
Bso31I GGTCTC 2 cut(s) 75, 1274
Bsp119I TTCGAA 2 cut(s) 852, 1371
Bsp1286I GDGCHC 1 cut(s) 1389
Bsp143I GATC 3 cut(s) 222, 331, 1088
Bsp19I CCATGG 1 cut(s) 499
BspACI CCGC 4 cut(s) 85, 185, 483, 1263
BspANI GGCC 3 cut(s) 638, 671, 1306
BspCNI CTCAG 2 cut(s) 29, 1508
BspDI ATCGAT 1 cut(s) 915
BspHI TCATGA 2 cut(s) 196, 319
BspLI GGNNCC 2 cut(s) 940, 1305
BspMI ACCTGC 1 cut(s) 1226
BspT104I TTCGAA 2 cut(s) 852, 1371
BspT107I GGYRCC 1 cut(s) 938
BspTNI GGTCTC 2 cut(s) 75, 1274
BsrDI GCAATG 4 cut(s) 561, 728, 894, 1273
BsrFI RCCGGY 1 cut(s) 305
BsrI ACTGG 2 cut(s) 288, 1613
BssAI RCCGGY 1 cut(s) 305
BssECI CCNNGG 7 cut(s) 74, 241, 499, 626, 1135, 1299, 1300
BssMI GATC 3 cut(s) 222, 331, 1088
BssSI CACGAG 1 cut(s) 1557
BssT1I CCWWGG 4 cut(s) 74, 241, 499, 626
Bst2BI CACGAG 1 cut(s) 1557
Bst2UI CCWGG 4 cut(s) 662, 760, 1301, 1480
Bst4CI ACNGT 2 cut(s) 907, 1422
Bst6I CTCTTC 1 cut(s) 965
BstAPI GCANNNNNTGC 2 cut(s) 491, 730
BstBAI YACGTR 1 cut(s) 128
BstBI TTCGAA 2 cut(s) 852, 1371
BstC8I GCNNGC 3 cut(s) 699, 870, 1389
BstDEI CTNAG 6 cut(s) 16, 178, 365, 746, 1308, 1495
BstDSI CCRYGG 1 cut(s) 499
BstENI CCTNNNNNAGG 1 cut(s) 1577
BstF5I GGATG 4 cut(s) 331, 1176, 1299, 1573
BstH2I RGCGCY 1 cut(s) 241
BstHHI GCGC 2 cut(s) 240, 291
BstKTI GATC 3 cut(s) 225, 334, 1091
BstMAI GTCTC 6 cut(s) 75, 321, 391, 801, 1109, 1274
BstMBI GATC 3 cut(s) 222, 331, 1088
BstMWI GCNNNNNNNGC 4 cut(s) 491, 730, 1263, 1407
BstNI CCWGG 4 cut(s) 662, 760, 1301, 1480
BstNSI RCATGY 2 cut(s) 1449, 1604
BstSCI CCNGG 4 cut(s) 660, 758, 1299, 1478
BstSFI CTRYAG 1 cut(s) 189
BstSLI GKGCMC 1 cut(s) 1389
BstV1I GCAGC 4 cut(s) 32, 194, 590, 1403
BstV2I GAAGAC 3 cut(s) 114, 1176, 1593
BstXI CCANNNNNNTGG 1 cut(s) 75
Bsu15I ATCGAT 1 cut(s) 915
BsuI GTATCC 1 cut(s) 371
BsuRI GGCC 3 cut(s) 638, 671, 1306
BsuTUI ATCGAT 1 cut(s) 915
BtgI CCRYGG 1 cut(s) 499
BtsCI GGATG 4 cut(s) 331, 1176, 1299, 1573
BtsIMutI CAGTG 3 cut(s) 281, 903, 963
BveI ACCTGC 1 cut(s) 1226
Cac8I GCNNGC 3 cut(s) 699, 870, 1389
CciI TCATGA 2 cut(s) 196, 319
CfoI GCGC 2 cut(s) 240, 291
Cfr10I RCCGGY 1 cut(s) 305
Cfr13I GGNCC 1 cut(s) 1304
ClaI ATCGAT 1 cut(s) 915
CseI GACGC 1 cut(s) 1383
Csp6I GTAC 1 cut(s) 475
CviQI GTAC 1 cut(s) 475
DdeI CTNAG 6 cut(s) 16, 178, 365, 746, 1308, 1495
DpnI GATC 3 cut(s) 224, 333, 1090
DpnII GATC 3 cut(s) 222, 331, 1088
Eam1104I CTCTTC 1 cut(s) 965
EarI CTCTTC 1 cut(s) 965
Eco130I CCWWGG 4 cut(s) 74, 241, 499, 626
Eco31I GGTCTC 2 cut(s) 75, 1274
Eco32I GATATC 2 cut(s) 922, 988
Eco57I CTGAAG 2 cut(s) 987, 1308
EcoNI CCTNNNNNAGG 1 cut(s) 1577
EcoO109I RGGNCCY 1 cut(s) 1304
EcoRII CCWGG 4 cut(s) 660, 758, 1299, 1478
EcoRV GATATC 2 cut(s) 922, 988
EcoT14I CCWWGG 4 cut(s) 74, 241, 499, 626
EcoT22I ATGCAT 1 cut(s) 934
ErhI CCWWGG 4 cut(s) 74, 241, 499, 626
Esp3I CGTCTC 1 cut(s) 1109
FalI AAGNNNNNCTT 4 cut(s) 425, 457, 1268, 1300
FaqI GGGAC 1 cut(s) 1282
FauNDI CATATG 1 cut(s) 1197
Fnu4HI GCNGC 7 cut(s) 21, 183, 186, 483, 579, 1264, 1392
FokI GGATG 4 cut(s) 338, 1163, 1306, 1580
Fsp4HI GCNGC 7 cut(s) 21, 183, 186, 483, 579, 1264, 1392
FspBI CTAG 4 cut(s) 242, 632, 719, 1244
GlaI GCGC 2 cut(s) 239, 290
GluI GCNGC 7 cut(s) 21, 183, 186, 483, 579, 1264, 1392
GsaI CCCAGC 1 cut(s) 686
GsuI CTGGAG 1 cut(s) 305
HaeII RGCGCY 1 cut(s) 241
HaeIII GGCC 3 cut(s) 638, 671, 1306
HapII CCGG 1 cut(s) 306
HgaI GACGC 1 cut(s) 1383
HhaI GCGC 2 cut(s) 240, 291
Hin6I GCGC 2 cut(s) 238, 289
HinP1I GCGC 2 cut(s) 238, 289
HindIII AAGCTT 3 cut(s) 439, 695, 791
HinfI GANTC 6 cut(s) 101, 1000, 1312, 1467, 1543, 1560
HpaII CCGG 1 cut(s) 306
HphI GGTGA 3 cut(s) 175, 337, 341
Hpy166II GTNNAC 1 cut(s) 562
Hpy188I TCNGA 6 cut(s) 106, 413, 1435, 1498, 1548, 1656
Hpy188III TCNNGA 3 cut(s) 197, 320, 1010
Hpy8I GTNNAC 1 cut(s) 562
HpyAV CCTTC 3 cut(s) 1076, 1477, 1544
HpyCH4III ACNGT 2 cut(s) 907, 1422
HpyCH4IV ACGT 1 cut(s) 127
HpyF10VI GCNNNNNNNGC 4 cut(s) 491, 730, 1263, 1407
HpyF3I CTNAG 6 cut(s) 16, 178, 365, 746, 1308, 1495
HpySE526I ACGT 1 cut(s) 127
HspAI GCGC 2 cut(s) 238, 289
Kzo9I GATC 3 cut(s) 222, 331, 1088
LmnI GCTCC 3 cut(s) 286, 742, 1192
Lsp1109I GCAGC 4 cut(s) 32, 194, 590, 1403
LweI GCATC 2 cut(s) 919, 1491
MaeI CTAG 4 cut(s) 242, 632, 719, 1244
MaeII ACGT 1 cut(s) 127
MaeIII GTNAC 7 cut(s) 343, 586, 883, 1028, 1139, 1213, 1270
MalI GATC 3 cut(s) 224, 333, 1090
MboI GATC 3 cut(s) 222, 331, 1088
MhlI GDGCHC 1 cut(s) 1389
MluCI AATT 5 cut(s) 141, 879, 972, 1059, 1524
MlyI GAGTC 2 cut(s) 1476, 1569
MmeI TCCRAC 4 cut(s) 74, 687, 1339, 1413
MnlI CCTC 8 cut(s) 316, 628, 682, 1130, 1183, 1332, 1374, 1583
Mph1103I ATGCAT 1 cut(s) 934
MroXI GAANNNNTTC 1 cut(s) 972
MseI TTAA 6 cut(s) 93, 153, 402, 549, 692, 1145
MslI CAYNNNNRTG 2 cut(s) 324, 549
MspA1I CMGCKG 1 cut(s) 185
MspI CCGG 1 cut(s) 306
MspR9I CCNGG 4 cut(s) 662, 760, 1301, 1480
Mva1269I GAATGC 1 cut(s) 1412
MvaI CCWGG 4 cut(s) 662, 760, 1301, 1480
MwoI GCNNNNNNNGC 4 cut(s) 491, 730, 1263, 1407
NcoI CCATGG 1 cut(s) 499
NdeI CATATG 1 cut(s) 1197
NdeII GATC 3 cut(s) 222, 331, 1088
NlaIV GGNNCC 2 cut(s) 940, 1305
NmeAIII GCCGAG 1 cut(s) 1160
NmuCI GTSAC 1 cut(s) 343
NsiI ATGCAT 1 cut(s) 934
NspI RCATGY 2 cut(s) 1449, 1604
NspV TTCGAA 2 cut(s) 852, 1371
PagI TCATGA 2 cut(s) 196, 319
PasI CCCWGGG 1 cut(s) 1300
PctI GAATGC 1 cut(s) 1412
PdmI GAANNNNTTC 1 cut(s) 972
PfeI GAWTC 4 cut(s) 101, 1000, 1312, 1543
PflMI CCANNNNNTGG 2 cut(s) 667, 765
PkrI GCNGC 7 cut(s) 22, 184, 187, 484, 580, 1265, 1393
PleI GAGTC 2 cut(s) 1475, 1568
PpsI GAGTC 2 cut(s) 1475, 1568
Ppu21I YACGTR 1 cut(s) 128
Psp6I CCWGG 4 cut(s) 660, 758, 1299, 1478
PspFI CCCAGC 1 cut(s) 682
PspGI CCWGG 4 cut(s) 660, 758, 1299, 1478
PspN4I GGNNCC 2 cut(s) 940, 1305
PspPI GGNCC 1 cut(s) 1304
RsaI GTAC 1 cut(s) 476
RsaNI GTAC 1 cut(s) 475
RseI CAYNNNNRTG 2 cut(s) 324, 549
SaqAI TTAA 6 cut(s) 93, 153, 402, 549, 692, 1145
SatI GCNGC 7 cut(s) 21, 183, 186, 483, 579, 1264, 1392
Sau3AI GATC 3 cut(s) 222, 331, 1088
Sau96I GGNCC 1 cut(s) 1304
SchI GAGTC 2 cut(s) 1476, 1569
ScrFI CCNGG 4 cut(s) 662, 760, 1301, 1480
SduI GDGCHC 1 cut(s) 1389
SfaNI GCATC 2 cut(s) 919, 1491
SfcI CTRYAG 1 cut(s) 189
SfuI TTCGAA 2 cut(s) 852, 1371
SmiMI CAYNNNNRTG 2 cut(s) 324, 549
Sse9I AATT 5 cut(s) 141, 879, 972, 1059, 1524
SsiI CCGC 4 cut(s) 85, 185, 483, 1263
SspMI CTAG 4 cut(s) 242, 632, 719, 1244
StyD4I CCNGG 4 cut(s) 660, 758, 1299, 1478
StyI CCWWGG 4 cut(s) 74, 241, 499, 626
TaaI ACNGT 2 cut(s) 907, 1422
TaiI ACGT 1 cut(s) 130
TaqI TCGA 7 cut(s) 225, 852, 915, 1044, 1337, 1371, 1470
TasI AATT 5 cut(s) 141, 879, 972, 1059, 1524
TauI GCSGC 3 cut(s) 188, 485, 1266
TfiI GAWTC 4 cut(s) 101, 1000, 1312, 1543
Tru1I TTAA 6 cut(s) 93, 153, 402, 549, 692, 1145
Tru9I TTAA 6 cut(s) 93, 153, 402, 549, 692, 1145
TscAI CASTG 3 cut(s) 288, 910, 970
TseFI GTSAC 1 cut(s) 343
TseI GCWGC 4 cut(s) 20, 182, 578, 1391
Tsp45I GTSAC 1 cut(s) 343
TspDTI ATGAA 9 cut(s) 79, 534, 1013, 1083, 1091, 1136, 1182, 1430, 1623
TspRI CASTG 3 cut(s) 288, 910, 970
Van91I CCANNNNNTGG 2 cut(s) 667, 765
XagI CCTNNNNNAGG 1 cut(s) 1577
XceI RCATGY 2 cut(s) 1449, 1604
XmaJI CCTAGG 1 cut(s) 241
XmnI GAANNNNTTC 1 cut(s) 972
XspI CTAG 4 cut(s) 242, 632, 719, 1244
Zsp2I ATGCAT 1 cut(s) 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.