Rw1G013290

synthase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
29661068 .. 29664586
3519 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G013290.1

Sequence Viewer

Length: 1683 bp
ATGTCTGTCTCACTTTCTTTAGCATCTGAAGCCCTAAGCCCAAATGCCACTGCTGATGTTAAGAGACATTCTGCTATCTTTAAGCCTAGCATTTGGGGTGAATATTTTCTGTCATATGCTTCCATGGAAGTGGATATTACTCTTGAGCAACAAGTTCAACAATTGAAGGAAGAAGTGAAGAGGATGCTTGTGGATAATGTTAAAGACAGTTCACAAAAACTTAGCTTGATTGATGACATTCAACGCTTAGGCGTATCCTACCATTTTGAAAATGAGATTTGCGAAATTTTGCAACAAATATTTGACAATGACAATGTTTCCTATGATGATCTTTATCAAAATAATTCCGACCTTTATGCAGTTGCTCTTCGTTTTCGATTGCTTAGACAACAAGGGTACAATGCTTCATCTGACACGTACTTCAATAACTTGAAGGACAACGATGGAAAATTCAAGGAATCACTTGTCTGTGATACAAAAGGACTACTAGGCTTGTACGAAGCCACACATCTTCGGATACATGGTGACAATATACTTGATGAGGCACTAAACTTCACCACAACTAATCTTGAGTCTGCAACACACCGCGGTTTAAGCTCCCCACTTTTGAAACAAGTAACTCACGCCTTGTATCAGCCTCTTTGGAAGGGCCTGCCAAGGATAGAAGCGAGGCATTACTTGTCTACCTACCAAGAAGACGATTCTCATAATGAAACTCTCCTGAATTTCGCACGGCTGGATTTCAACCTACTGCAACAATTCCATCAAAAAGAACTATGTGAAATTACAAGGTGGTGGAAGACTTTGGACTTCGTGATCAAGAACTTATCTTTTGCAAGAGATAGGGTGGTTGAGTGCTACTTTTGGGCTTTGGGAATCTTCTTTGAGCCAGAATATTACTTTGCTAGGAGAGCATTAAGCAAAGTTATTTGCATGGTAACCCTAATTGATGACATCTACGATGTTTATGGCACACCTGAAGAACTAGAGCTCTTTAATGAAGCTATTCAGAGGTGGGACATCTCTGCCATAGATCAATTGCCAGACTATATGAAAGTTTGTTATCAGGCACTATTAGATGTCTACACAGAAATTGAAGAAAAGCTAGCAAGCGAGGGAAACTTGTATGGCATTCACCATGCAAGAGAATCTATGAAAATCCATGTCGATGGTTACATAAAAGAAGCCAGATGGTTACACTCGAAGTACACCCCGACTCTTGATGAATATATGTCAGTAGCACTTTCTACATCCTTGTATATGTTGTCAATCACATCCGCAGTTGTTATGGGACTTGCTGCTACAAAAGACTCCTTGGATTGGTTACTCACTGACCCTAACATAGTAAACGCTGCATCAGTAGTTGGCAGACTCTTAAATGACATTATGTCCCGTCAGAGACAGCATTCTGCTTCAGCTGTGGAATTATACATGAAAGAACATGGTGCTACAGAAGAAGAAGCCATAGTGGAACTAACTAATCAAGTGAATGACGCATGGAAGGTTATAAACAAAGCATGCCTCCACCCTACCCGAATCCCATTGTCGGTTCTAATGCGACCTCTCAACCATGCACGTTTGTGTGAAGTTATCTACAAGTATGAAGATGCCTTTACAAACGCTGGGGATGAGCTCAAGGGTTTTGTGACTTCTCTGCTTATCGAACCTGTTCCTACTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

560

Amino Acids

64.32

Weight (kDa)

5.02

Isoelectric Point (pI)

43.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 31 - 210 2.1e-55 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 274 - 501 8.1e-89 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 308 - 501 2.3e-51 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1508
AccI GTMKAC 2 cut(s) 683, 1083
AccII CGCG 1 cut(s) 588
AciI CCGC 3 cut(s) 586, 588, 1278
AcsI RAATTY 3 cut(s) 285, 449, 724
AcuI CTGAAG 3 cut(s) 48, 999, 1398
AfaI GTAC 4 cut(s) 398, 419, 497, 1208
AfiI CCNNNNNNNGG 2 cut(s) 1320, 1546
AflIII ACRYGT 1 cut(s) 414
AhdI GACNNNNNGTC 1 cut(s) 1387
AleI CACNNNNGTG 1 cut(s) 1579
AluBI AGCT 7 cut(s) 225, 597, 991, 1004, 1105, 1418, 1633
AluI AGCT 7 cut(s) 225, 597, 991, 1004, 1105, 1418, 1633
Alw21I GWGCWC 2 cut(s) 993, 1635
Alw26I GTCTC 3 cut(s) 13, 58, 1393
AoxI GGCC 1 cut(s) 649
ApeKI GCWGC 2 cut(s) 1298, 1352
ApoI RAATTY 3 cut(s) 285, 449, 724
Asp700I GAANNNNTTC 3 cut(s) 105, 1005, 1668
AspS9I GGNCC 1 cut(s) 649
AsuHPI GGTGA 4 cut(s) 110, 536, 547, 1127
AsuNHI GCTAGC 1 cut(s) 1105
BanII GRGCYC 2 cut(s) 993, 1635
BbsI GAAGAC 2 cut(s) 702, 806
Bbv12I GWGCWC 2 cut(s) 993, 1635
BbvI GCAGC 2 cut(s) 1285, 1339
BccI CCATC 4 cut(s) 437, 771, 1163, 1185
BceAI ACGGC 1 cut(s) 749
BcgI CGANNNNNNTGC 2 cut(s) 338, 372
BciVI GTATCC 2 cut(s) 265, 510
BclI TGATCA 1 cut(s) 816
BcoDI GTCTC 3 cut(s) 13, 58, 1393
BfaI CTAG 5 cut(s) 87, 488, 906, 986, 1106
BfmI CTRYAG 1 cut(s) 1449
BfuI GTATCC 2 cut(s) 265, 510
BisI GCNGC 2 cut(s) 1299, 1353
BlsI GCNGC 2 cut(s) 1300, 1354
BmeRI GACNNNNNGTC 1 cut(s) 1387
BmgT120I GGNCC 1 cut(s) 649
BmsI GCATC 4 cut(s) 32, 174, 1364, 1597
BmtI GCTAGC 1 cut(s) 1109
BpiI GAAGAC 2 cut(s) 702, 806
Bpu10I CCTNAGC 2 cut(s) 35, 247
BpuEI CTTGAG 3 cut(s) 164, 590, 1619
BsaAI YACGTR 1 cut(s) 417
BsaBI GATNNNNATC 1 cut(s) 333
BsaJI CCNNGG 4 cut(s) 123, 586, 656, 1314
Bsc4I CCNNNNNNNGG 2 cut(s) 1320, 1546
Bse8I GATNNNNATC 1 cut(s) 333
BseDI CCNNGG 4 cut(s) 123, 586, 656, 1314
BseGI GGATG 4 cut(s) 189, 1250, 1274, 1633
BseJI GATNNNNATC 1 cut(s) 333
BseLI CCNNNNNNNGG 2 cut(s) 1320, 1546
BseXI GCAGC 2 cut(s) 1285, 1339
BseYI CCCAGC 1 cut(s) 1622
Bsh1236I CGCG 1 cut(s) 588
BshFI GGCC 1 cut(s) 651
BsiHKAI GWGCWC 2 cut(s) 993, 1635
BslFI GGGAC 3 cut(s) 1031, 1305, 1375
BslI CCNNNNNNNGG 2 cut(s) 1320, 1546
BsmAI GTCTC 3 cut(s) 13, 58, 1393
BsmFI GGGAC 3 cut(s) 1031, 1305, 1375
BsmI GAATGC 2 cut(s) 1131, 1405
BsnI GGCC 1 cut(s) 651
Bsp1286I GDGCHC 2 cut(s) 993, 1635
Bsp143I GATC 3 cut(s) 328, 816, 1033
Bsp19I CCATGG 1 cut(s) 123
BspACI CCGC 3 cut(s) 586, 588, 1278
BspANI GGCC 1 cut(s) 651
BspFNI CGCG 1 cut(s) 588
BspOI GCTAGC 1 cut(s) 1109
BspQI GCTCTTC 1 cut(s) 372
BssECI CCNNGG 4 cut(s) 123, 586, 656, 1314
BssMI GATC 3 cut(s) 328, 816, 1033
BssT1I CCWWGG 3 cut(s) 123, 656, 1314
Bst4CI ACNGT 1 cut(s) 209
Bst6I CTCTTC 2 cut(s) 173, 372
BstBAI YACGTR 1 cut(s) 417
BstC8I GCNNGC 4 cut(s) 653, 1107, 1111, 1519
BstDEI CTNAG 4 cut(s) 35, 221, 247, 383
BstDSI CCRYGG 2 cut(s) 123, 586
BstEII GGTNACC 1 cut(s) 937
BstF5I GGATG 4 cut(s) 189, 1250, 1274, 1633
BstFNI CGCG 1 cut(s) 588
BstKTI GATC 3 cut(s) 331, 819, 1036
BstMAI GTCTC 3 cut(s) 13, 58, 1393
BstMBI GATC 3 cut(s) 328, 816, 1033
BstMWI GCNNNNNNNGC 3 cut(s) 29, 594, 911
BstNSI RCATGY 1 cut(s) 1521
BstPI GGTNACC 1 cut(s) 937
BstSFI CTRYAG 1 cut(s) 1449
BstUI CGCG 1 cut(s) 588
BstV1I GCAGC 2 cut(s) 1285, 1339
BstV2I GAAGAC 2 cut(s) 702, 806
BstXI CCANNNNNNTGG 2 cut(s) 130, 1169
BsuI GTATCC 2 cut(s) 265, 510
BsuRI GGCC 1 cut(s) 651
BtgI CCRYGG 2 cut(s) 123, 586
BtsCI GGATG 4 cut(s) 189, 1250, 1274, 1633
BtsI GCAGTG 1 cut(s) 48
BtsIMutI CAGTG 2 cut(s) 48, 1329
Cac8I GCNNGC 4 cut(s) 653, 1107, 1111, 1519
Cfr13I GGNCC 1 cut(s) 649
Cfr42I CCGCGG 1 cut(s) 589
CseI GACGC 1 cut(s) 1502
Csp6I GTAC 4 cut(s) 397, 418, 496, 1207
CviQI GTAC 4 cut(s) 397, 418, 496, 1207
DdeI CTNAG 4 cut(s) 35, 221, 247, 383
DpnI GATC 3 cut(s) 330, 818, 1035
DpnII GATC 3 cut(s) 328, 816, 1033
DriI GACNNNNNGTC 1 cut(s) 1387
Eam1104I CTCTTC 2 cut(s) 173, 372
Eam1105I GACNNNNNGTC 1 cut(s) 1387
EarI CTCTTC 2 cut(s) 173, 372
Ecl136II GAGCTC 2 cut(s) 991, 1633
Eco130I CCWWGG 3 cut(s) 123, 656, 1314
Eco24I GRGCYC 2 cut(s) 993, 1635
Eco53kI GAGCTC 2 cut(s) 991, 1633
Eco57I CTGAAG 3 cut(s) 48, 999, 1398
Eco91I GGTNACC 1 cut(s) 937
EcoICRI GAGCTC 2 cut(s) 991, 1633
EcoO109I RGGNCCY 1 cut(s) 649
EcoO65I GGTNACC 1 cut(s) 937
EcoT14I CCWWGG 3 cut(s) 123, 656, 1314
EcoT38I GRGCYC 2 cut(s) 993, 1635
ErhI CCWWGG 3 cut(s) 123, 656, 1314
FaqI GGGAC 3 cut(s) 1031, 1305, 1375
FauNDI CATATG 1 cut(s) 115
FbaI TGATCA 1 cut(s) 816
FblI GTMKAC 2 cut(s) 683, 1083
Fnu4HI GCNGC 2 cut(s) 1299, 1353
FokI GGATG 4 cut(s) 196, 1237, 1261, 1640
FriOI GRGCYC 2 cut(s) 993, 1635
Fsp4HI GCNGC 2 cut(s) 1299, 1353
FspBI CTAG 5 cut(s) 87, 488, 906, 986, 1106
GluI GCNGC 2 cut(s) 1299, 1353
GsaI CCCAGC 1 cut(s) 1626
HaeIII GGCC 1 cut(s) 651
HgaI GACGC 1 cut(s) 1502
HinfI GANTC 9 cut(s) 458, 572, 701, 876, 1148, 1216, 1310, 1371, 1536
HphI GGTGA 4 cut(s) 110, 536, 547, 1127
Hpy166II GTNNAC 5 cut(s) 212, 684, 1084, 1209, 1348
Hpy188I TCNGA 6 cut(s) 28, 349, 412, 516, 1011, 1398
Hpy188III TCNNGA 6 cut(s) 143, 569, 721, 814, 820, 1220
Hpy8I GTNNAC 5 cut(s) 212, 684, 1084, 1209, 1348
HpyAV CCTTC 4 cut(s) 160, 427, 640, 1495
HpyCH4III ACNGT 1 cut(s) 209
HpyCH4IV ACGT 2 cut(s) 416, 1576
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 594, 911
HpyF3I CTNAG 4 cut(s) 35, 221, 247, 383
HpySE526I ACGT 2 cut(s) 416, 1576
Ksp22I TGATCA 1 cut(s) 816
KspI CCGCGG 1 cut(s) 589
Kzo9I GATC 3 cut(s) 328, 816, 1033
LguI GCTCTTC 1 cut(s) 372
LmnI GCTCC 1 cut(s) 602
LpnPI CCDG 9 cut(s) 665, 722, 734, 903, 990, 1052, 1056, 1201, 1608
Lsp1109I GCAGC 2 cut(s) 1285, 1339
LweI GCATC 4 cut(s) 32, 174, 1364, 1597
MaeI CTAG 5 cut(s) 87, 488, 906, 986, 1106
MaeII ACGT 2 cut(s) 416, 1576
MaeIII GTNAC 7 cut(s) 524, 616, 937, 1172, 1194, 1323, 1645
MalI GATC 3 cut(s) 330, 818, 1035
MboI GATC 3 cut(s) 328, 816, 1033
MfeI CAATTG 2 cut(s) 161, 1037
MhlI GDGCHC 2 cut(s) 993, 1635
MlyI GAGTC 4 cut(s) 581, 1210, 1304, 1365
MmeI TCCRAC 1 cut(s) 372
MnlI CCTC 8 cut(s) 174, 535, 648, 663, 1005, 1108, 1532, 1572
MroXI GAANNNNTTC 3 cut(s) 105, 1005, 1668
MseI TTAA 7 cut(s) 60, 81, 201, 593, 917, 996, 1376
MslI CAYNNNNRTG 3 cut(s) 128, 1167, 1579
MspA1I CMGCKG 2 cut(s) 588, 1418
MunI CAATTG 2 cut(s) 161, 1037
Mva1269I GAATGC 2 cut(s) 1131, 1405
MvnI CGCG 1 cut(s) 588
MwoI GCNNNNNNNGC 3 cut(s) 29, 594, 911
NcoI CCATGG 1 cut(s) 123
NdeI CATATG 1 cut(s) 115
NdeII GATC 3 cut(s) 328, 816, 1033
NheI GCTAGC 1 cut(s) 1105
NmuCI GTSAC 2 cut(s) 524, 1645
NspI RCATGY 1 cut(s) 1521
OliI CACNNNNGTG 1 cut(s) 1579
PaeI GCATGC 1 cut(s) 1521
PciSI GCTCTTC 1 cut(s) 372
PctI GAATGC 2 cut(s) 1131, 1405
PdmI GAANNNNTTC 3 cut(s) 105, 1005, 1668
PfeI GAWTC 5 cut(s) 458, 701, 876, 1148, 1536
PkrI GCNGC 2 cut(s) 1300, 1354
PleI GAGTC 4 cut(s) 580, 1210, 1304, 1365
PpsI GAGTC 4 cut(s) 580, 1210, 1304, 1365
Ppu21I YACGTR 1 cut(s) 417
PsiI TTATAA 1 cut(s) 1508
Psp124BI GAGCTC 2 cut(s) 993, 1635
PspEI GGTNACC 1 cut(s) 937
PspFI CCCAGC 1 cut(s) 1622
PspPI GGNCC 1 cut(s) 649
PvuII CAGCTG 1 cut(s) 1418
RsaI GTAC 4 cut(s) 398, 419, 497, 1208
RsaNI GTAC 4 cut(s) 397, 418, 496, 1207
RseI CAYNNNNRTG 3 cut(s) 128, 1167, 1579
SacI GAGCTC 2 cut(s) 993, 1635
SacII CCGCGG 1 cut(s) 589
SapI GCTCTTC 1 cut(s) 372
SaqAI TTAA 7 cut(s) 60, 81, 201, 593, 917, 996, 1376
SatI GCNGC 2 cut(s) 1299, 1353
Sau3AI GATC 3 cut(s) 328, 816, 1033
Sau96I GGNCC 1 cut(s) 649
SchI GAGTC 4 cut(s) 581, 1210, 1304, 1365
SduI GDGCHC 2 cut(s) 993, 1635
SfaNI GCATC 4 cut(s) 32, 174, 1364, 1597
SfcI CTRYAG 1 cut(s) 1449
Sfr303I CCGCGG 1 cut(s) 589
SgrBI CCGCGG 1 cut(s) 589
SmiMI CAYNNNNRTG 3 cut(s) 128, 1167, 1579
SmlI CTYRAG 3 cut(s) 143, 569, 1634
SmoI CTYRAG 3 cut(s) 143, 569, 1634
SphI GCATGC 1 cut(s) 1521
SsiI CCGC 3 cut(s) 586, 588, 1278
SspI AATATT 3 cut(s) 104, 300, 896
SspMI CTAG 5 cut(s) 87, 488, 906, 986, 1106
SstI GAGCTC 2 cut(s) 993, 1635
StyI CCWWGG 3 cut(s) 123, 656, 1314
TaaI ACNGT 1 cut(s) 209
TaiI ACGT 2 cut(s) 419, 1579
TaqI TCGA 4 cut(s) 376, 1167, 1202, 1662
TatI WGTACW 1 cut(s) 1206
TfiI GAWTC 5 cut(s) 458, 701, 876, 1148, 1536
Tru1I TTAA 7 cut(s) 60, 81, 201, 593, 917, 996, 1376
Tru9I TTAA 7 cut(s) 60, 81, 201, 593, 917, 996, 1376
TscAI CASTG 2 cut(s) 55, 1336
TseFI GTSAC 2 cut(s) 524, 1645
TseI GCWGC 2 cut(s) 1298, 1352
Tsp45I GTSAC 2 cut(s) 524, 1645
TspDTI ATGAA 8 cut(s) 396, 726, 1014, 1067, 1169, 1239, 1448, 1617
TspRI CASTG 2 cut(s) 55, 1336
XapI RAATTY 3 cut(s) 285, 449, 724
XceI RCATGY 1 cut(s) 1521
XmiI GTMKAC 2 cut(s) 683, 1083
XmnI GAANNNNTTC 3 cut(s) 105, 1005, 1668
XspI CTAG 5 cut(s) 87, 488, 906, 986, 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.