RH1AG007500

synthase

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0000053
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG007500.1

Sequence Viewer

Length: 1692 bp
ATGGATCAAGCTCGAACCCCAAATGCTAGTAACACTTATGCTATTGATCGACGTTCAGCTAATTTTTCTCCCAGCGTTTGGGGCGATTATTTTCTGTCATATGCATCAATGGAAACTGTGGATATTGAATCCAACCAAAATATCCAAGAACTGAAGGAAGAAGTGAAGAGGATGCTAATGAGTTCTCTGTCTTTACAAAGATTACACTTGATTGATTACATTCAGCGCTTGGGGTTGTCCTACCATTTTGAGAATGAGATTCACCAACTTTTACAGCAAGTTTACAATTGGTACTGTTCCTCTGATGATGATGATGATGATGACGACGACCTTCACACAGTTGCTCTACGATTTAGGCTGCTTAGGCAACAAGGTTTTAAGGTTTCATGCAAAGACATGTTCAACAAGTTCATCGATGTTGATGGAACATTTAAGAGCTCATGCATAGCTGACATAGTAGGATTGCTAAGTTTGTACGAAGCAACACATCTAAGGACACATGGAGATGATATATTAGATCAAGCACTGTCCTTCACCACCACTCATCTTGAGTTTGCAGTTGCAGCACACGGCCGTTTAAGCCCCCCGCTTTTGAAACAAGTATCTCATGCCTTACATCAGCCACTCTGGAAGGGAAACCCAAGGATTGAAGCGAGGCACTACCTCTCTATCTATCGGGAACTAGACACTACACATTTCAGCGGAAGTCTTTTGGCTTTTGCGAAGTTGGATTTCAATCAATTGCAACGAATCCATCAAAAGGAACTAAGTGACATCACAAGGTGGTGGAAAGAGTTCGACTTTGTAAACAAACTACCTTTTGCAAGGGACAGAATAGTAGAGTGTTACTTTTGGTCTTTGGGAGTCTACTTTGAGCCTAAGTATCATTTTGGGAGGACAACAGTATGCAAAGTTTTTGGCTTAGTAACCTTGATTGATGACACTTACGATACATATGGCACACCTGTAGAACTAGAGCTCTTTAGTGAAGCTGTTGAGAGGTGGGATATCTCTGCCATGGATTCATTGCCTGACTATATGAAAGTTTGCTATGAGGCATTGTTGAATGTCTACACTGAAATTGAAGATGAGCTTGCAAAGGAGGGAAACTCATATCGCATCAACTATGCAATAGAAGCAGTGCAAATTTTAGTTAGATCTTACTTCGAGGAAGCCAAATGGTTCCACCAAAAATACACACCGAAAACCTTTGATGAATATATGTCGGTGGCACTTGTATCAGCCGGCATGTTGACGATGGAAGCAACATTTATTGTTCCAATAGCCGATGATACTGTTACAAGAGATTCCTTGGACTGGTTGTTCAGTGATCCTAAATTTGTAAAGGCTTCGTCGATAATTGGGAGACTTTTAAATGACATCCGAAGCCACAAGCTTGAGCAAAAGAGAGGACATGTTGTCTCAGCGGTGGAATGCTATATGAAAGACCACTGTGCTACAGAAGAAGAAGCGGTGATTGAACTAACTAAACAAGTGAATGATGCATGGAAGGATGTAAACGAAGGATTGCTTCACCCTATCGCTACTGTCCCTAGGCCACTACTATTGCTAATTCTCAATTTTCTACGCGTAACTGATGTTATATACAAGTATGAAGATGGTTATACTCATGGCGGAGTTGTGCTTAAGGATTATATAACTTCTCTTCTTGTCGAACCTGTTCCAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

563

Amino Acids

65.18

Weight (kDa)

5.12

Isoelectric Point (pI)

42.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 26 - 205 2.8e-57 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 264 - 505 1.8e-95 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 304 - 505 2.2e-52 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 78
AccI GTMKAC 2 cut(s) 867, 1071
AccII CGCG 1 cut(s) 1590
AciI CCGC 5 cut(s) 587, 702, 1427, 1472, 1635
AclWI GGATC 2 cut(s) 12, 1325
AcoI YGGCCR 1 cut(s) 571
AcsI RAATTY 2 cut(s) 1146, 1337
AcuI CTGAAG 1 cut(s) 173
AdeI CACNNNGTG 1 cut(s) 783
AfaI GTAC 2 cut(s) 293, 476
AfeI AGCGCT 1 cut(s) 227
AfiI CCNNNNNNNGG 3 cut(s) 78, 760, 1317
AflII CTTAAG 1 cut(s) 1646
AflIII ACRYGT 3 cut(s) 396, 1414, 1588
AgsI TTSAA 8 cut(s) 128, 403, 595, 650, 736, 1066, 1085, 1481
AhdI GACNNNNNGTC 1 cut(s) 1418
AloI GAACNNNNNNTCC 2 cut(s) 1307, 1339
AluBI AGCT 8 cut(s) 11, 59, 438, 449, 979, 992, 1093, 1396
AluI AGCT 8 cut(s) 11, 59, 438, 449, 979, 992, 1093, 1396
Alw21I GWGCWC 2 cut(s) 440, 981
Alw26I GTCTC 2 cut(s) 1360, 1426
AlwI GGATC 2 cut(s) 12, 1325
Aor51HI AGCGCT 1 cut(s) 227
AoxI GGCC 2 cut(s) 571, 1556
ApeKI GCWGC 2 cut(s) 358, 563
ApoI RAATTY 2 cut(s) 1146, 1337
Asp700I GAANNNNTTC 2 cut(s) 794, 1680
AspA2I CCTAGG 1 cut(s) 1553
AspLEI GCGC 1 cut(s) 228
AsuHPI GGTGA 4 cut(s) 254, 526, 1486, 1526
AvrII CCTAGG 1 cut(s) 1553
BanII GRGCYC 2 cut(s) 440, 981
Bbv12I GWGCWC 2 cut(s) 440, 981
BbvI GCAGC 2 cut(s) 345, 575
BccI CCATC 4 cut(s) 416, 762, 1252, 1613
BceAI ACGGC 2 cut(s) 558, 586
BcoDI GTCTC 2 cut(s) 1360, 1426
BfaI CTAG 4 cut(s) 27, 683, 974, 1554
BfmI CTRYAG 2 cut(s) 966, 1458
BfoI RGCGCY 1 cut(s) 229
BfrI CTTAAG 1 cut(s) 1646
BglII AGATCT 1 cut(s) 1157
BisI GCNGC 2 cut(s) 359, 564
BlnI CCTAGG 1 cut(s) 1553
BlsI GCNGC 2 cut(s) 360, 565
BmeRI GACNNNNNGTC 1 cut(s) 1418
BmiI GGNNCC 1 cut(s) 1184
BmsI GCATC 4 cut(s) 113, 162, 1128, 1492
BplI GAGNNNNNCTC 2 cut(s) 1094, 1126
Bpu10I CCTNAGC 1 cut(s) 362
BpuEI CTTGAG 2 cut(s) 569, 1418
Bsa29I ATCGAT 1 cut(s) 414
BsaBI GATNNNNATC 1 cut(s) 735
BsaJI CCNNGG 4 cut(s) 641, 1017, 1311, 1553
Bsc4I CCNNNNNNNGG 3 cut(s) 78, 760, 1317
Bse118I RCCGGY 1 cut(s) 1244
Bse1I ACTGG 1 cut(s) 1322
Bse3DI GCAATG 1 cut(s) 1025
Bse8I GATNNNNATC 1 cut(s) 735
BseCI ATCGAT 1 cut(s) 414
BseDI CCNNGG 4 cut(s) 641, 1017, 1311, 1553
BseGI GGATG 3 cut(s) 177, 1380, 1519
BseJI GATNNNNATC 1 cut(s) 735
BseLI CCNNNNNNNGG 3 cut(s) 78, 760, 1317
BseMI GCAATG 1 cut(s) 1025
BseMII CTCAG 1 cut(s) 1437
BseNI ACTGG 1 cut(s) 1322
BseX3I CGGCCG 1 cut(s) 571
BseXI GCAGC 2 cut(s) 345, 575
BseYI CCCAGC 1 cut(s) 71
Bsh1236I CGCG 1 cut(s) 1590
Bsh1285I CGRYCG 1 cut(s) 574
BshFI GGCC 2 cut(s) 573, 1558
BshVI ATCGAT 1 cut(s) 414
BsiEI CGRYCG 1 cut(s) 574
BsiHKAI GWGCWC 2 cut(s) 440, 981
BsiSI CCGG 1 cut(s) 1245
BslFI GGGAC 2 cut(s) 842, 1535
BslI CCNNNNNNNGG 3 cut(s) 78, 760, 1317
BsmAI GTCTC 2 cut(s) 1360, 1426
BsmFI GGGAC 2 cut(s) 842, 1535
BsmI GAATGC 1 cut(s) 1439
BsnI GGCC 2 cut(s) 573, 1558
Bsp1286I GDGCHC 2 cut(s) 440, 981
Bsp143I GATC 5 cut(s) 4, 46, 517, 1157, 1330
Bsp19I CCATGG 1 cut(s) 1017
BspACI CCGC 5 cut(s) 587, 702, 1427, 1472, 1635
BspANI GGCC 2 cut(s) 573, 1558
BspCNI CTCAG 1 cut(s) 1436
BspDI ATCGAT 1 cut(s) 414
BspFNI CGCG 1 cut(s) 1590
BspLI GGNNCC 1 cut(s) 1184
BspPI GGATC 2 cut(s) 12, 1325
BspTI CTTAAG 1 cut(s) 1646
BsrDI GCAATG 1 cut(s) 1025
BsrFI RCCGGY 1 cut(s) 1244
BsrI ACTGG 1 cut(s) 1322
BssAI RCCGGY 1 cut(s) 1244
BssECI CCNNGG 4 cut(s) 641, 1017, 1311, 1553
BssMI GATC 5 cut(s) 4, 46, 517, 1157, 1330
BssT1I CCWWGG 4 cut(s) 641, 1017, 1311, 1553
Bst4CI ACNGT 8 cut(s) 118, 296, 340, 528, 904, 1297, 1454, 1549
Bst6I CTCTTC 2 cut(s) 161, 1671
BstAFI CTTAAG 1 cut(s) 1646
BstC8I GCNNGC 2 cut(s) 1095, 1246
BstDEI CTNAG 7 cut(s) 362, 467, 491, 767, 879, 922, 1423
BstDSI CCRYGG 1 cut(s) 1017
BstF5I GGATG 3 cut(s) 177, 1380, 1519
BstFNI CGCG 1 cut(s) 1590
BstH2I RGCGCY 1 cut(s) 229
BstHHI GCGC 1 cut(s) 228
BstKTI GATC 5 cut(s) 7, 49, 520, 1160, 1333
BstMAI GTCTC 2 cut(s) 1360, 1426
BstMBI GATC 5 cut(s) 4, 46, 517, 1157, 1330
BstMCI CGRYCG 1 cut(s) 574
BstMWI GCNNNNNNNGC 5 cut(s) 81, 364, 563, 579, 1136
BstNSI RCATGY 3 cut(s) 400, 1252, 1418
BstSFI CTRYAG 2 cut(s) 966, 1458
BstUI CGCG 1 cut(s) 1590
BstV1I GCAGC 2 cut(s) 345, 575
BstX2I RGATCY 1 cut(s) 1157
BstYI RGATCY 1 cut(s) 1157
BstZI CGGCCG 1 cut(s) 571
Bsu15I ATCGAT 1 cut(s) 414
BsuRI GGCC 2 cut(s) 573, 1558
BsuTUI ATCGAT 1 cut(s) 414
BtgI CCRYGG 1 cut(s) 1017
BtsCI GGATG 3 cut(s) 177, 1380, 1519
BtsI GCAGTG 1 cut(s) 1146
BtsIMutI CAGTG 5 cut(s) 524, 1074, 1146, 1333, 1450
Cac8I GCNNGC 2 cut(s) 1095, 1246
CfoI GCGC 1 cut(s) 228
Cfr10I RCCGGY 1 cut(s) 1244
ClaI ATCGAT 1 cut(s) 414
Csp6I GTAC 2 cut(s) 292, 475
CspCI CAANNNNNGTGG 4 cut(s) 529, 564, 1548, 1583
CviQI GTAC 2 cut(s) 292, 475
DdeI CTNAG 7 cut(s) 362, 467, 491, 767, 879, 922, 1423
DpnI GATC 5 cut(s) 6, 48, 519, 1159, 1332
DpnII GATC 5 cut(s) 4, 46, 517, 1157, 1330
DraI TTTAAA 1 cut(s) 1374
DraIII CACNNNGTG 1 cut(s) 783
DriI GACNNNNNGTC 1 cut(s) 1418
EaeI YGGCCR 1 cut(s) 571
EagI CGGCCG 1 cut(s) 571
Eam1104I CTCTTC 2 cut(s) 161, 1671
Eam1105I GACNNNNNGTC 1 cut(s) 1418
EarI CTCTTC 2 cut(s) 161, 1671
EciI GGCGGA 1 cut(s) 1650
Ecl136II GAGCTC 2 cut(s) 438, 979
EclXI CGGCCG 1 cut(s) 571
Eco130I CCWWGG 4 cut(s) 641, 1017, 1311, 1553
Eco24I GRGCYC 2 cut(s) 440, 981
Eco32I GATATC 1 cut(s) 1009
Eco47III AGCGCT 1 cut(s) 227
Eco52I CGGCCG 1 cut(s) 571
Eco53kI GAGCTC 2 cut(s) 438, 979
Eco57I CTGAAG 1 cut(s) 173
EcoICRI GAGCTC 2 cut(s) 438, 979
EcoRV GATATC 1 cut(s) 1009
EcoT14I CCWWGG 4 cut(s) 641, 1017, 1311, 1553
EcoT22I ATGCAT 3 cut(s) 106, 446, 1507
EcoT38I GRGCYC 2 cut(s) 440, 981
ErhI CCWWGG 4 cut(s) 641, 1017, 1311, 1553
FalI AAGNNNNNCTT 4 cut(s) 1077, 1109, 1515, 1547
FaqI GGGAC 2 cut(s) 842, 1535
FauI CCCGC 1 cut(s) 594
FauNDI CATATG 2 cut(s) 100, 955
FblI GTMKAC 2 cut(s) 867, 1071
Fnu4HI GCNGC 2 cut(s) 359, 564
FokI GGATG 3 cut(s) 184, 1367, 1526
FriOI GRGCYC 2 cut(s) 440, 981
Fsp4HI GCNGC 2 cut(s) 359, 564
FspBI CTAG 4 cut(s) 27, 683, 974, 1554
GlaI GCGC 1 cut(s) 227
GluI GCNGC 2 cut(s) 359, 564
GsaI CCCAGC 1 cut(s) 75
HaeII RGCGCY 1 cut(s) 229
HaeIII GGCC 2 cut(s) 573, 1558
HapII CCGG 1 cut(s) 1245
HhaI GCGC 1 cut(s) 228
Hin6I GCGC 1 cut(s) 226
HinP1I GCGC 1 cut(s) 226
HincII GTYRAC 1 cut(s) 1254
HindII GTYRAC 1 cut(s) 1254
HindIII AAGCTT 1 cut(s) 1394
HinfI GANTC 6 cut(s) 128, 259, 750, 864, 1022, 1307
HpaII CCGG 1 cut(s) 1245
HphI GGTGA 4 cut(s) 254, 526, 1486, 1526
Hpy166II GTNNAC 6 cut(s) 283, 808, 868, 1072, 1254, 1519
Hpy188I TCNGA 2 cut(s) 304, 1385
Hpy188III TCNNGA 3 cut(s) 548, 628, 677
Hpy8I GTNNAC 6 cut(s) 283, 808, 868, 1072, 1254, 1519
Hpy99I CGWCG 3 cut(s) 54, 329, 1357
HpyAV CCTTC 6 cut(s) 148, 341, 541, 625, 1504, 1517
HpyCH4III ACNGT 8 cut(s) 118, 296, 340, 528, 904, 1297, 1454, 1549
HpyCH4IV ACGT 1 cut(s) 52
HpyF10VI GCNNNNNNNGC 5 cut(s) 81, 364, 563, 579, 1136
HpyF3I CTNAG 7 cut(s) 362, 467, 491, 767, 879, 922, 1423
HpySE526I ACGT 1 cut(s) 52
HspAI GCGC 1 cut(s) 226
KroI GCCGGC 1 cut(s) 1244
KroNI GCCGGC 1 cut(s) 1246
Kzo9I GATC 5 cut(s) 4, 46, 517, 1157, 1330
LpnPI CCDG 6 cut(s) 85, 613, 978, 1044, 1258, 1303
Lsp1109I GCAGC 2 cut(s) 345, 575
LweI GCATC 4 cut(s) 113, 162, 1128, 1492
MaeI CTAG 4 cut(s) 27, 683, 974, 1554
MaeII ACGT 1 cut(s) 52
MaeIII GTNAC 6 cut(s) 29, 770, 845, 925, 1297, 1591
MalI GATC 5 cut(s) 6, 48, 519, 1159, 1332
MboI GATC 5 cut(s) 4, 46, 517, 1157, 1330
MboII GAAGA 7 cut(s) 170, 178, 1097, 1475, 1478, 1628, 1658
MfeI CAATTG 2 cut(s) 286, 740
MflI RGATCY 1 cut(s) 1157
MhlI GDGCHC 2 cut(s) 440, 981
MluCI AATT 9 cut(s) 61, 286, 740, 1080, 1146, 1337, 1359, 1572, 1579
MluI ACGCGT 1 cut(s) 1588
MlyI GAGTC 1 cut(s) 873
MmeI TCCRAC 2 cut(s) 156, 708
Mph1103I ATGCAT 3 cut(s) 106, 446, 1507
MroNI GCCGGC 1 cut(s) 1244
MroXI GAANNNNTTC 2 cut(s) 794, 1680
MseI TTAA 5 cut(s) 378, 432, 578, 1373, 1647
MslI CAYNNNNRTG 1 cut(s) 504
MspA1I CMGCKG 2 cut(s) 702, 1427
MspCI CTTAAG 1 cut(s) 1646
MspI CCGG 1 cut(s) 1245
MunI CAATTG 2 cut(s) 286, 740
Mva1269I GAATGC 1 cut(s) 1439
MvnI CGCG 1 cut(s) 1590
MwoI GCNNNNNNNGC 5 cut(s) 81, 364, 563, 579, 1136
NaeI GCCGGC 1 cut(s) 1246
NcoI CCATGG 1 cut(s) 1017
NdeI CATATG 2 cut(s) 100, 955
NdeII GATC 5 cut(s) 4, 46, 517, 1157, 1330
NgoMIV GCCGGC 1 cut(s) 1244
NlaIV GGNNCC 1 cut(s) 1184
NmuCI GTSAC 1 cut(s) 770
NsiI ATGCAT 3 cut(s) 106, 446, 1507
NspI RCATGY 3 cut(s) 400, 1252, 1418
PciI ACATGT 2 cut(s) 396, 1414
PctI GAATGC 1 cut(s) 1439
PdiI GCCGGC 1 cut(s) 1246
PdmI GAANNNNTTC 2 cut(s) 794, 1680
PfeI GAWTC 5 cut(s) 128, 259, 750, 1022, 1307
PflMI CCANNNNNTGG 1 cut(s) 78
PkrI GCNGC 2 cut(s) 360, 565
PleI GAGTC 1 cut(s) 872
PpsI GAGTC 1 cut(s) 872
PscI ACATGT 2 cut(s) 396, 1414
Psp124BI GAGCTC 2 cut(s) 440, 981
PspFI CCCAGC 1 cut(s) 71
PspN4I GGNNCC 1 cut(s) 1184
PsuI RGATCY 1 cut(s) 1157
RsaI GTAC 2 cut(s) 293, 476
RsaNI GTAC 2 cut(s) 292, 475
RseI CAYNNNNRTG 1 cut(s) 504
SacI GAGCTC 2 cut(s) 440, 981
SaqAI TTAA 5 cut(s) 378, 432, 578, 1373, 1647
SatI GCNGC 2 cut(s) 359, 564
Sau3AI GATC 5 cut(s) 4, 46, 517, 1157, 1330
SchI GAGTC 1 cut(s) 873
SduI GDGCHC 2 cut(s) 440, 981
SfaNI GCATC 4 cut(s) 113, 162, 1128, 1492
SfcI CTRYAG 2 cut(s) 966, 1458
SmiMI CAYNNNNRTG 1 cut(s) 504
SmlI CTYRAG 3 cut(s) 548, 1397, 1646
SmoI CTYRAG 3 cut(s) 548, 1397, 1646
Sse9I AATT 9 cut(s) 61, 286, 740, 1080, 1146, 1337, 1359, 1572, 1579
SsiI CCGC 5 cut(s) 587, 702, 1427, 1472, 1635
SspMI CTAG 4 cut(s) 27, 683, 974, 1554
SstI GAGCTC 2 cut(s) 440, 981
StyI CCWWGG 4 cut(s) 641, 1017, 1311, 1553
TaaI ACNGT 8 cut(s) 118, 296, 340, 528, 904, 1297, 1454, 1549
TaiI ACGT 1 cut(s) 55
TaqI TCGA 7 cut(s) 13, 49, 414, 798, 1167, 1355, 1674
TasI AATT 9 cut(s) 61, 286, 740, 1080, 1146, 1337, 1359, 1572, 1579
TfiI GAWTC 5 cut(s) 128, 259, 750, 1022, 1307
Tru1I TTAA 5 cut(s) 378, 432, 578, 1373, 1647
Tru9I TTAA 5 cut(s) 378, 432, 578, 1373, 1647
TscAI CASTG 5 cut(s) 531, 1081, 1146, 1333, 1457
TseFI GTSAC 1 cut(s) 770
TseI GCWGC 2 cut(s) 358, 563
Tsp45I GTSAC 1 cut(s) 770
TspDTI ATGAA 7 cut(s) 375, 400, 1014, 1055, 1230, 1457, 1629
TspRI CASTG 5 cut(s) 531, 1081, 1146, 1333, 1457
Van91I CCANNNNNTGG 1 cut(s) 78
Vha464I CTTAAG 1 cut(s) 1646
XapI RAATTY 2 cut(s) 1146, 1337
XceI RCATGY 3 cut(s) 400, 1252, 1418
XmaJI CCTAGG 1 cut(s) 1553
XmiI GTMKAC 2 cut(s) 867, 1071
XmnI GAANNNNTTC 2 cut(s) 794, 1680
XspI CTAG 4 cut(s) 27, 683, 974, 1554
Zsp2I ATGCAT 3 cut(s) 106, 446, 1507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.