Rroxscaffold_4G00303170

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000053
Physical Location & Seq
Reverse (-)
23531010 .. 23536169
5160 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00303170.1

Sequence Viewer

Length: 1572 bp
ATGGAAGTAGATATTAGTCTTCAGCAACAAGTTCAACAACTGAAGGAAGAAGTGAAAAGGATGCTTATGCATAATGTTAAAGACGGTTCACAAAAACTAAGCTTGATTGATGACATTCAACGCTTAGGCGTGTCCTACCATTTCAACAATGAGATTTGTGAAATTTTGCAGCAAATATTTGACAATGACCATGTTTCAGATGATGATCTTCATCAAAATAATTCTGACCTTTATGCAGTTGCTCTTCGTTTCCGATTGCTTAGGCAACAAGGATACAATGCTTCATGTGACATGTACTTCAGCAACTTGAAAGACAATGATGGGAAATTCAAGGAATCACTTGTCTGTGATACTAAAGGACTACTAGGCTTGTATGAAGCCACGCATCTTCGGATACACGGTGATAACATACTTGACGAGGCACTAGCCTTCACCACAACTCATCTTGAGTCTGCAACACGCCGTGGTTTAAGCTCCCCACTTTCGAAACAAGTAACTCATGCCTTGTATCAGCCTCTTTGGAAGGGCATGTCAAGGATAGAAGTGAGGCATTACTTGTCTACCTACCAAGAAGACGATTCTCATGATGAAACTCTCCTGAATTTTGCACGGCTGGATTTCAACATACTGCAGCAACTCCATCAAAAAGAACTATGTGAAATTACAAGGTGGTGGAAGGATTTGGACTTCGTGAAGAACTTACCTTTTGCAAGAGATAGGTTGGTTGAGTGCTACGTTTCCGCTTTGGGAACCCTCTTTGAGCCAGATTATTGCTTTGCTAGGAAGACATTAAGCAAAGTTATTTACATGGTAGCCGTGATTGATGACATGTTTGATGTTTATGGCACACTTGAAGAGCTAGAGCTCTTTAATGAAGCTATTCAAAGGTGGCACATCTCTGCCATGGATCAATTGCCTACAGACTATATGAAATTCTGTTATCAGGCATTGTTGGATGTCTACACTGAAATTGAAGAAAAGCTTGCAAGCGAGGGAAACTTGTATGGCATTCACCATGCAAGAGAATCGATGAAAATCCATATCAATGGTTACATGAAAGAAGCTAGATGGTTTTACTCGAAATACACCCCAACTTTTGATGAATATATTCCGCTAGCAGTTGTTACATCCTTGTATTCGCTGTCAATTGCATCCGTTGTTGGAATGGGACTTGCTGCTACAAAAGACTCCTTGGATTGGTTATTCACTGACCCTGGGATCGTAAACGCTACATCATTAGTTGGCAGACTGTTAAACGACATTATGTCCCATCAGTTTGAACAAAAGAGAGGGCATTCTGCTTCAGCTGTGGAATTATACATGAAAGAACATGGTGCTACTGAAGAAGAAGCCATAGCAGAACTAACTAATCAAGTGAATGATGCATGGAAGGTCATAAACAAAGCTTGCCTCCACCCCACCCGAATCCCATTGCCGGTTCTAATGCGACCTCTCAACCTTGCACGTTTGATGGAAGTTCTTTACAAGAATGTGGATTCCTTTACGAAGCCTGGAGTTGAGTTCAATAGTTTTGTGACTTCTCTGCTTATCGAACCCGTGCCTACTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

523

Amino Acids

60.23

Weight (kDa)

5.22

Isoelectric Point (pI)

49.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 7 - 169 1.3e-54 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 226 - 464 2.4e-90 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 266 - 464 8.2e-55 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 560, 960
AciI CCGC 2 cut(s) 741, 1112
AclWI GGATC 2 cut(s) 915, 1226
AcsI RAATTY 4 cut(s) 162, 326, 601, 932
AcuI CTGAAG 5 cut(s) 5, 62, 283, 1287, 1362
AdeI CACNNNGTG 1 cut(s) 464
AfaI GTAC 1 cut(s) 296
AfiI CCNNNNNNNGG 2 cut(s) 1197, 1435
AflIII ACRYGT 2 cut(s) 291, 828
AhdI GACNNNNNGTC 1 cut(s) 1264
AjnI CCWGG 2 cut(s) 1213, 1510
AluBI AGCT 9 cut(s) 102, 474, 859, 865, 878, 982, 1064, 1307, 1406
AluI AGCT 9 cut(s) 102, 474, 859, 865, 878, 982, 1064, 1307, 1406
Alw21I GWGCWC 1 cut(s) 867
AlwI GGATC 2 cut(s) 915, 1226
ApeKI GCWGC 3 cut(s) 169, 631, 1175
ApoI RAATTY 4 cut(s) 162, 326, 601, 932
Asp700I GAANNNNTTC 2 cut(s) 879, 1107
AsuHPI GGTGA 3 cut(s) 413, 424, 1004
AsuII TTCGAA 1 cut(s) 485
AsuNHI GCTAGC 1 cut(s) 1114
BanII GRGCYC 1 cut(s) 867
BbsI GAAGAC 3 cut(s) 11, 579, 791
Bbv12I GWGCWC 1 cut(s) 867
BbvI GCAGC 3 cut(s) 181, 643, 1162
BccI CCATC 5 cut(s) 314, 648, 1062, 1278, 1465
BceAI ACGGC 3 cut(s) 447, 626, 800
BcgI CGANNNNNNTGC 2 cut(s) 1008, 1042
BciT130I CCWGG 2 cut(s) 1215, 1512
BciVI GTATCC 2 cut(s) 266, 387
BfaI CTAG 6 cut(s) 365, 425, 780, 860, 1065, 1115
BfmI CTRYAG 2 cut(s) 629, 918
BfuI GTATCC 2 cut(s) 266, 387
BisI GCNGC 3 cut(s) 170, 632, 1176
BlsI GCNGC 3 cut(s) 171, 633, 1177
Bme1390I CCNGG 2 cut(s) 1215, 1512
BmeRI GACNNNNNGTC 1 cut(s) 1264
BmiI GGNNCC 1 cut(s) 751
BmrFI CCNGG 2 cut(s) 1215, 1512
BmsI GCATC 4 cut(s) 51, 394, 1160, 1372
BmtI GCTAGC 1 cut(s) 1118
BpiI GAAGAC 3 cut(s) 11, 579, 791
BpmI CTGGAG 1 cut(s) 1533
Bpu10I CCTNAGC 2 cut(s) 124, 260
Bpu14I TTCGAA 1 cut(s) 485
BpuEI CTTGAG 1 cut(s) 467
Bsa29I ATCGAT 1 cut(s) 1028
BsaBI GATNNNNATC 3 cut(s) 204, 210, 1034
BsaJI CCNNGG 5 cut(s) 463, 903, 1191, 1213, 1214
Bsc4I CCNNNNNNNGG 2 cut(s) 1197, 1435
Bse118I RCCGGY 1 cut(s) 1435
Bse3DI GCAATG 1 cut(s) 1430
Bse8I GATNNNNATC 3 cut(s) 204, 210, 1034
BseBI CCWGG 2 cut(s) 1215, 1512
BseCI ATCGAT 1 cut(s) 1028
BseDI CCNNGG 5 cut(s) 463, 903, 1191, 1213, 1214
BseGI GGATG 4 cut(s) 66, 961, 1127, 1151
BseJI GATNNNNATC 3 cut(s) 204, 210, 1034
BseLI CCNNNNNNNGG 2 cut(s) 1197, 1435
BseMI GCAATG 1 cut(s) 1430
BseXI GCAGC 3 cut(s) 181, 643, 1162
BshVI ATCGAT 1 cut(s) 1028
BsiHKAI GWGCWC 1 cut(s) 867
BsiSI CCGG 1 cut(s) 1436
BslFI GGGAC 2 cut(s) 1182, 1252
BslI CCNNNNNNNGG 2 cut(s) 1197, 1435
BsmFI GGGAC 2 cut(s) 1182, 1252
BsmI GAATGC 2 cut(s) 1008, 1294
Bsp119I TTCGAA 1 cut(s) 485
Bsp1286I GDGCHC 1 cut(s) 867
Bsp143I GATC 3 cut(s) 205, 907, 1218
Bsp19I CCATGG 1 cut(s) 903
BspACI CCGC 2 cut(s) 741, 1112
BspDI ATCGAT 1 cut(s) 1028
BspHI TCATGA 1 cut(s) 583
BspLI GGNNCC 1 cut(s) 751
BspMAI CTGCAG 1 cut(s) 633
BspOI GCTAGC 1 cut(s) 1118
BspPI GGATC 2 cut(s) 915, 1226
BspQI GCTCTTC 2 cut(s) 249, 849
BspT104I TTCGAA 1 cut(s) 485
BsrDI GCAATG 1 cut(s) 1430
BsrFI RCCGGY 1 cut(s) 1435
BssAI RCCGGY 1 cut(s) 1435
BssECI CCNNGG 5 cut(s) 463, 903, 1191, 1213, 1214
BssMI GATC 3 cut(s) 205, 907, 1218
BssT1I CCWWGG 2 cut(s) 903, 1191
Bst2UI CCWGG 2 cut(s) 1215, 1512
Bst4CI ACNGT 3 cut(s) 86, 401, 1251
Bst6I CTCTTC 2 cut(s) 249, 849
BstBI TTCGAA 1 cut(s) 485
BstC8I GCNNGC 4 cut(s) 984, 988, 1116, 1408
BstDEI CTNAG 3 cut(s) 98, 124, 260
BstDSI CCRYGG 2 cut(s) 463, 903
BstF5I GGATG 4 cut(s) 66, 961, 1127, 1151
BstKTI GATC 3 cut(s) 208, 910, 1221
BstMBI GATC 3 cut(s) 205, 907, 1218
BstNI CCWGG 2 cut(s) 1215, 1512
BstNSI RCATGY 3 cut(s) 295, 532, 832
BstSCI CCNGG 2 cut(s) 1213, 1510
BstSFI CTRYAG 2 cut(s) 629, 918
BstV1I GCAGC 3 cut(s) 181, 643, 1162
BstV2I GAAGAC 3 cut(s) 11, 579, 791
BstXI CCANNNNNNTGG 1 cut(s) 1046
Bsu15I ATCGAT 1 cut(s) 1028
BsuI GTATCC 2 cut(s) 266, 387
BsuTUI ATCGAT 1 cut(s) 1028
BtgI CCRYGG 2 cut(s) 463, 903
BtsCI GGATG 4 cut(s) 66, 961, 1127, 1151
BtsIMutI CAGTG 2 cut(s) 963, 1206
Cac8I GCNNGC 4 cut(s) 984, 988, 1116, 1408
CciI TCATGA 1 cut(s) 583
Cfr10I RCCGGY 1 cut(s) 1435
ClaI ATCGAT 1 cut(s) 1028
Csp6I GTAC 1 cut(s) 295
CviQI GTAC 1 cut(s) 295
DdeI CTNAG 3 cut(s) 98, 124, 260
DpnI GATC 3 cut(s) 207, 909, 1220
DpnII GATC 3 cut(s) 205, 907, 1218
DraIII CACNNNGTG 1 cut(s) 464
DriI GACNNNNNGTC 1 cut(s) 1264
Eam1104I CTCTTC 2 cut(s) 249, 849
Eam1105I GACNNNNNGTC 1 cut(s) 1264
EarI CTCTTC 2 cut(s) 249, 849
Ecl136II GAGCTC 1 cut(s) 865
Eco130I CCWWGG 2 cut(s) 903, 1191
Eco24I GRGCYC 1 cut(s) 867
Eco53kI GAGCTC 1 cut(s) 865
Eco57I CTGAAG 5 cut(s) 5, 62, 283, 1287, 1362
EcoICRI GAGCTC 1 cut(s) 865
EcoRII CCWGG 2 cut(s) 1213, 1510
EcoT14I CCWWGG 2 cut(s) 903, 1191
EcoT22I ATGCAT 2 cut(s) 72, 1387
EcoT38I GRGCYC 1 cut(s) 867
ErhI CCWWGG 2 cut(s) 903, 1191
FalI AAGNNNNNCTT 2 cut(s) 966, 998
FaqI GGGAC 2 cut(s) 1182, 1252
FblI GTMKAC 2 cut(s) 560, 960
Fnu4HI GCNGC 3 cut(s) 170, 632, 1176
FokI GGATG 4 cut(s) 73, 968, 1114, 1138
FriOI GRGCYC 1 cut(s) 867
Fsp4HI GCNGC 3 cut(s) 170, 632, 1176
FspBI CTAG 6 cut(s) 365, 425, 780, 860, 1065, 1115
GluI GCNGC 3 cut(s) 170, 632, 1176
GsuI CTGGAG 1 cut(s) 1533
HapII CCGG 1 cut(s) 1436
HindIII AAGCTT 3 cut(s) 100, 980, 1404
HinfI GANTC 7 cut(s) 335, 449, 578, 1025, 1187, 1425, 1496
HpaII CCGG 1 cut(s) 1436
HphI GGTGA 3 cut(s) 413, 424, 1004
Hpy166II GTNNAC 4 cut(s) 89, 561, 961, 1225
Hpy188I TCNGA 4 cut(s) 199, 226, 254, 393
Hpy188III TCNNGA 4 cut(s) 446, 584, 598, 691
Hpy8I GTNNAC 4 cut(s) 89, 561, 961, 1225
HpyAV CCTTC 5 cut(s) 37, 439, 517, 670, 1384
HpyCH4III ACNGT 3 cut(s) 86, 401, 1251
HpyCH4IV ACGT 2 cut(s) 735, 1465
HpyF3I CTNAG 3 cut(s) 98, 124, 260
HpySE526I ACGT 2 cut(s) 735, 1465
Kzo9I GATC 3 cut(s) 205, 907, 1218
LguI GCTCTTC 2 cut(s) 249, 849
LmnI GCTCC 1 cut(s) 479
LpnPI CCDG 9 cut(s) 599, 611, 777, 929, 1200, 1227, 1449, 1497, 1524
Lsp1109I GCAGC 3 cut(s) 181, 643, 1162
LweI GCATC 4 cut(s) 51, 394, 1160, 1372
MaeI CTAG 6 cut(s) 365, 425, 780, 860, 1065, 1115
MaeII ACGT 2 cut(s) 735, 1465
MaeIII GTNAC 5 cut(s) 287, 493, 1049, 1123, 1534
MalI GATC 3 cut(s) 207, 909, 1220
MboI GATC 3 cut(s) 205, 907, 1218
MfeI CAATTG 2 cut(s) 911, 1146
MhlI GDGCHC 1 cut(s) 867
MlyI GAGTC 2 cut(s) 458, 1181
MmeI TCCRAC 2 cut(s) 933, 1141
MnlI CCTC 8 cut(s) 412, 525, 540, 764, 985, 1283, 1421, 1461
Mph1103I ATGCAT 2 cut(s) 72, 1387
MroXI GAANNNNTTC 2 cut(s) 879, 1107
MseI TTAA 5 cut(s) 78, 470, 791, 870, 1253
MslI CAYNNNNRTG 1 cut(s) 1044
MspA1I CMGCKG 1 cut(s) 1307
MspI CCGG 1 cut(s) 1436
MspR9I CCNGG 2 cut(s) 1215, 1512
MunI CAATTG 2 cut(s) 911, 1146
Mva1269I GAATGC 2 cut(s) 1008, 1294
MvaI CCWGG 2 cut(s) 1215, 1512
NcoI CCATGG 1 cut(s) 903
NdeII GATC 3 cut(s) 205, 907, 1218
NheI GCTAGC 1 cut(s) 1114
NlaIV GGNNCC 1 cut(s) 751
NmuCI GTSAC 2 cut(s) 287, 1534
NsiI ATGCAT 2 cut(s) 72, 1387
NspI RCATGY 3 cut(s) 295, 532, 832
NspV TTCGAA 1 cut(s) 485
PagI TCATGA 1 cut(s) 583
PasI CCCWGGG 1 cut(s) 1214
PciI ACATGT 2 cut(s) 291, 828
PciSI GCTCTTC 2 cut(s) 249, 849
PctI GAATGC 2 cut(s) 1008, 1294
PdmI GAANNNNTTC 2 cut(s) 879, 1107
PfeI GAWTC 5 cut(s) 335, 578, 1025, 1425, 1496
PkrI GCNGC 3 cut(s) 171, 633, 1177
PleI GAGTC 2 cut(s) 457, 1181
PpsI GAGTC 2 cut(s) 457, 1181
PscI ACATGT 2 cut(s) 291, 828
Psp124BI GAGCTC 1 cut(s) 867
Psp6I CCWGG 2 cut(s) 1213, 1510
PspGI CCWGG 2 cut(s) 1213, 1510
PspN4I GGNNCC 1 cut(s) 751
PstI CTGCAG 1 cut(s) 633
PvuII CAGCTG 1 cut(s) 1307
RsaI GTAC 1 cut(s) 296
RsaNI GTAC 1 cut(s) 295
RseI CAYNNNNRTG 1 cut(s) 1044
SacI GAGCTC 1 cut(s) 867
SapI GCTCTTC 2 cut(s) 249, 849
SaqAI TTAA 5 cut(s) 78, 470, 791, 870, 1253
SatI GCNGC 3 cut(s) 170, 632, 1176
Sau3AI GATC 3 cut(s) 205, 907, 1218
SchI GAGTC 2 cut(s) 458, 1181
ScrFI CCNGG 2 cut(s) 1215, 1512
SduI GDGCHC 1 cut(s) 867
SfaNI GCATC 4 cut(s) 51, 394, 1160, 1372
SfcI CTRYAG 2 cut(s) 629, 918
SfuI TTCGAA 1 cut(s) 485
SmiMI CAYNNNNRTG 1 cut(s) 1044
SmlI CTYRAG 1 cut(s) 446
SmoI CTYRAG 1 cut(s) 446
SsiI CCGC 2 cut(s) 741, 1112
SspI AATATT 1 cut(s) 177
SspMI CTAG 6 cut(s) 365, 425, 780, 860, 1065, 1115
SstI GAGCTC 1 cut(s) 867
StyD4I CCNGG 2 cut(s) 1213, 1510
StyI CCWWGG 2 cut(s) 903, 1191
TaaI ACNGT 3 cut(s) 86, 401, 1251
TaiI ACGT 2 cut(s) 738, 1468
TaqI TCGA 4 cut(s) 485, 1028, 1079, 1551
TatI WGTACW 1 cut(s) 294
TfiI GAWTC 5 cut(s) 335, 578, 1025, 1425, 1496
Tru1I TTAA 5 cut(s) 78, 470, 791, 870, 1253
Tru9I TTAA 5 cut(s) 78, 470, 791, 870, 1253
TscAI CASTG 2 cut(s) 970, 1213
TseFI GTSAC 2 cut(s) 287, 1534
TseI GCWGC 3 cut(s) 169, 631, 1175
Tsp45I GTSAC 2 cut(s) 287, 1534
TspGWI ACGGA 1 cut(s) 1144
TspRI CASTG 2 cut(s) 970, 1213
XapI RAATTY 4 cut(s) 162, 326, 601, 932
XceI RCATGY 3 cut(s) 295, 532, 832
XmiI GTMKAC 2 cut(s) 560, 960
XmnI GAANNNNTTC 2 cut(s) 879, 1107
XspI CTAG 6 cut(s) 365, 425, 780, 860, 1065, 1115
Zsp2I ATGCAT 2 cut(s) 72, 1387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.