Rmu_sc0006435.1_g000010

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006435.1
OG0000053
Physical Location & Seq
Forward (+)
27462 .. 33424
5963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006435.1_g000010.1.cds

Sequence Viewer

Length: 1269 bp
atgcaacagcaaattgacgaactgaaagcactagtgaaggaagaagttttcgcatcatatgatgcttcatatcagctgaaattgattgatgaaatccaacgcctaggtgtggcataccattttgaaacagaaatagatgaagcactagaaaatatctatgttaaataccatgatgatggtgatctggacctatacaatgtttctcttcgttttcgtctactaagacaacatggatataatgtttcatctgatatattcagcaaatttaaagatgcaaacggttacttcaaggagagcttaattgctgatatcttagctatcctatgcttgtatgaggcaacacatcttagggttcctggagaagaaataatagaagaagctcttgttttcaccaccacccaccttgaattggcgataagtggtgtaagctatccactagctgcaaaaatatctcaagccctagagaggcctctgcgtagaggtctagagaggttatgtagcaggaattacataccaatctacgaagccactactccgcataacgaagcgctactgaaacttgcgaagttagatttcaatctggttcaatctttgcacaatgaggagcttagtgaggtttcaaggtgggggaaagaactaggcttggaaaagaatcttccttttgtaaggtgtaggattgtggagtgtttcttttggatggtgggaatgtattttgaaccccgatactcgaatcaagctagagactaccttattgaggcccaatggctccatgaaggatgtatcccttgcatggaggagtatatgcatgtcagattgagttctgttggtgttgctatgactgtagccttttctttaattggaatggaagaaactattaccgaggaaacatttgagtggattttgaagtacccgaaaagtattagagcttcgagccttatatttaggctcatggatgacattgcggggagtaagcataagaaagaaaaaggggatgttgcttctagtattgaatgttacatgaagcaatatggggtctcagagaaagagactatcgatgtgtttaacaaacaaattatagatgcatggaaggacataaatgaggatttacttcgaccaactgttgtgccgatgtgtgcgattaagctcggtcttaatttcgcaagaggtgttgatctggtttacaaagaagaagatgaattcacatatgttggagaagtagttaaacgctctgtcgccgcactttttgttgacccattgccactcgaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

422

Amino Acids

48.64

Weight (kDa)

4.98

Isoelectric Point (pI)

45.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 217
AciI CCGC 3 cut(s) 536, 962, 1236
AcsI RAATTY 2 cut(s) 263, 1196
AfaI GTAC 1 cut(s) 908
AfeI AGCGCT 1 cut(s) 549
AfiI CCNNNNNNNGG 5 cut(s) 109, 409, 465, 754, 790
AgsI TTSAA 9 cut(s) 125, 289, 407, 577, 587, 621, 716, 904, 1010
AhlI ACTAGT 1 cut(s) 31
AjnI CCWGG 1 cut(s) 355
Alw26I GTCTC 3 cut(s) 735, 1039, 1040
Aor51HI AGCGCT 1 cut(s) 549
AoxI GGCC 2 cut(s) 467, 756
ApeKI GCWGC 1 cut(s) 440
ApoI RAATTY 2 cut(s) 263, 1196
AspA2I CCTAGG 1 cut(s) 103
AspLEI GCGC 1 cut(s) 550
AspS9I GGNCC 2 cut(s) 187, 757
AsuHPI GGTGA 2 cut(s) 191, 382
AvaII GGWCC 1 cut(s) 187
AvrII CCTAGG 1 cut(s) 103
BarI GAAGNNNNNNTAC 2 cut(s) 910, 942
BbvI GCAGC 1 cut(s) 427
BccI CCATC 2 cut(s) 170, 691
BciT130I CCWGG 1 cut(s) 357
BciVI GTATCC 1 cut(s) 791
BcoDI GTCTC 3 cut(s) 735, 1039, 1040
BcuI ACTAGT 1 cut(s) 31
BfaI CTAG 9 cut(s) 32, 104, 146, 437, 461, 485, 638, 738, 1002
BfmI CTRYAG 1 cut(s) 840
BfoI RGCGCY 1 cut(s) 551
BfuI GTATCC 1 cut(s) 791
BisI GCNGC 2 cut(s) 441, 1236
BlnI CCTAGG 1 cut(s) 103
BlsI GCNGC 2 cut(s) 442, 1237
Bme1390I CCNGG 1 cut(s) 357
Bme18I GGWCC 1 cut(s) 187
BmgT120I GGNCC 2 cut(s) 187, 757
BmiI GGNNCC 2 cut(s) 354, 767
BmrFI CCNGG 1 cut(s) 357
BmsI GCATC 4 cut(s) 52, 62, 262, 1069
BpmI CTGGAG 1 cut(s) 378
BpuEI CTTGAG 1 cut(s) 438
Bsa29I ATCGAT 1 cut(s) 1053
BsaBI GATNNNNATC 2 cut(s) 180, 576
BsaI GGTCTC 1 cut(s) 1039
BsaJI CCNNGG 2 cut(s) 103, 879
BsaXI ACNNNNNCTCC 2 cut(s) 1203, 1233
Bsc4I CCNNNNNNNGG 5 cut(s) 109, 409, 465, 754, 790
Bse3DI GCAATG 2 cut(s) 957, 1253
Bse8I GATNNNNATC 2 cut(s) 180, 576
BseBI CCWGG 1 cut(s) 357
BseCI ATCGAT 1 cut(s) 1053
BseDI CCNNGG 2 cut(s) 103, 879
BseGI GGATG 4 cut(s) 702, 782, 958, 997
BseJI GATNNNNATC 2 cut(s) 180, 576
BseLI CCNNNNNNNGG 5 cut(s) 109, 409, 465, 754, 790
BseMI GCAATG 2 cut(s) 957, 1253
BseMII CTCAG 1 cut(s) 1050
BseRI GAGGAG 2 cut(s) 617, 809
BseXI GCAGC 1 cut(s) 427
BshFI GGCC 2 cut(s) 469, 758
BshVI ATCGAT 1 cut(s) 1053
BslI CCNNNNNNNGG 5 cut(s) 109, 409, 465, 754, 790
BsmAI GTCTC 3 cut(s) 735, 1039, 1040
BsnI GGCC 2 cut(s) 469, 758
Bso31I GGTCTC 1 cut(s) 1039
Bsp143I GATC 2 cut(s) 181, 1171
BspACI CCGC 3 cut(s) 536, 962, 1236
BspANI GGCC 2 cut(s) 469, 758
BspCNI CTCAG 1 cut(s) 1049
BspDI ATCGAT 1 cut(s) 1053
BspLI GGNNCC 2 cut(s) 354, 767
BspTNI GGTCTC 1 cut(s) 1039
BsrDI GCAATG 2 cut(s) 957, 1253
BssECI CCNNGG 2 cut(s) 103, 879
BssMI GATC 2 cut(s) 181, 1171
BssT1I CCWWGG 1 cut(s) 103
Bst2UI CCWGG 1 cut(s) 357
Bst4CI ACNGT 3 cut(s) 281, 841, 1120
Bst6I CTCTTC 1 cut(s) 210
BstDEI CTNAG 5 cut(s) 221, 313, 347, 608, 1036
BstENI CCTNNNNNAGG 1 cut(s) 752
BstF5I GGATG 4 cut(s) 702, 782, 958, 997
BstH2I RGCGCY 1 cut(s) 551
BstHHI GCGC 1 cut(s) 550
BstKTI GATC 2 cut(s) 184, 1174
BstMAI GTCTC 3 cut(s) 735, 1039, 1040
BstMBI GATC 2 cut(s) 181, 1171
BstNI CCWGG 1 cut(s) 357
BstNSI RCATGY 1 cut(s) 809
BstSCI CCNGG 1 cut(s) 355
BstSFI CTRYAG 1 cut(s) 840
BstV1I GCAGC 1 cut(s) 427
BstXI CCANNNNNNTGG 1 cut(s) 176
Bsu15I ATCGAT 1 cut(s) 1053
BsuI GTATCC 1 cut(s) 791
BsuRI GGCC 2 cut(s) 469, 758
BsuTUI ATCGAT 1 cut(s) 1053
BtsCI GGATG 4 cut(s) 702, 782, 958, 997
CfoI GCGC 1 cut(s) 550
Cfr13I GGNCC 2 cut(s) 187, 757
ClaI ATCGAT 1 cut(s) 1053
Csp6I GTAC 1 cut(s) 907
CspCI CAANNNNNGTGG 2 cut(s) 385, 420
CviAII CATG 8 cut(s) 170, 230, 770, 790, 806, 949, 1018, 1083
CviQI GTAC 1 cut(s) 907
DdeI CTNAG 5 cut(s) 221, 313, 347, 608, 1036
DpnI GATC 2 cut(s) 183, 1173
DpnII GATC 2 cut(s) 181, 1171
DraI TTTAAA 1 cut(s) 268
Eam1104I CTCTTC 1 cut(s) 210
EarI CTCTTC 1 cut(s) 210
Eco130I CCWWGG 1 cut(s) 103
Eco147I AGGCCT 1 cut(s) 469
Eco31I GGTCTC 1 cut(s) 1039
Eco32I GATATC 1 cut(s) 310
Eco47I GGWCC 1 cut(s) 187
Eco47III AGCGCT 1 cut(s) 549
EcoNI CCTNNNNNAGG 1 cut(s) 752
EcoRI GAATTC 1 cut(s) 1196
EcoRII CCWGG 1 cut(s) 355
EcoRV GATATC 1 cut(s) 310
EcoT14I CCWWGG 1 cut(s) 103
EcoT22I ATGCAT 2 cut(s) 807, 1084
ErhI CCWWGG 1 cut(s) 103
FaeI CATG 8 cut(s) 173, 233, 773, 793, 809, 952, 1021, 1086
FalI AAGNNNNNCTT 4 cut(s) 281, 313, 366, 398
FatI CATG 8 cut(s) 169, 229, 769, 789, 805, 948, 1017, 1082
FauI CCCGC 1 cut(s) 955
FauNDI CATATG 2 cut(s) 58, 1204
FblI GTMKAC 1 cut(s) 217
Fnu4HI GCNGC 2 cut(s) 441, 1236
FokI GGATG 4 cut(s) 709, 789, 965, 1004
Fsp4HI GCNGC 2 cut(s) 441, 1236
FspBI CTAG 9 cut(s) 32, 104, 146, 437, 461, 485, 638, 738, 1002
GlaI GCGC 1 cut(s) 549
GluI GCNGC 2 cut(s) 441, 1236
GsuI CTGGAG 1 cut(s) 378
HaeII RGCGCY 1 cut(s) 551
HaeIII GGCC 2 cut(s) 469, 758
HhaI GCGC 1 cut(s) 550
Hin1II CATG 8 cut(s) 173, 233, 773, 793, 809, 952, 1021, 1086
Hin6I GCGC 1 cut(s) 548
HinP1I GCGC 1 cut(s) 548
HincII GTYRAC 1 cut(s) 1249
HindII GTYRAC 1 cut(s) 1249
HinfI GANTC 2 cut(s) 652, 730
HphI GGTGA 2 cut(s) 191, 382
Hpy166II GTNNAC 3 cut(s) 218, 1180, 1249
Hpy188I TCNGA 3 cut(s) 250, 812, 1039
Hpy188III TCNNGA 2 cut(s) 185, 485
Hpy8I GTNNAC 3 cut(s) 218, 1180, 1249
HpyAV CCTTC 3 cut(s) 31, 767, 1081
HpyCH4III ACNGT 3 cut(s) 281, 841, 1120
HpyCH4V TGCA 7 cut(s) 4, 275, 443, 595, 789, 805, 1082
HpyF3I CTNAG 5 cut(s) 221, 313, 347, 608, 1036
Hsp92II CATG 8 cut(s) 173, 233, 773, 793, 809, 952, 1021, 1086
HspAI GCGC 1 cut(s) 548
Kzo9I GATC 2 cut(s) 181, 1171
LmnI GCTCC 2 cut(s) 604, 771
LpnPI CCDG 6 cut(s) 170, 342, 369, 487, 566, 1160
Lsp1109I GCAGC 1 cut(s) 427
LweI GCATC 4 cut(s) 52, 62, 262, 1069
MaeI CTAG 9 cut(s) 32, 104, 146, 437, 461, 485, 638, 738, 1002
MaeIII GTNAC 2 cut(s) 281, 1013
MalI GATC 2 cut(s) 183, 1173
MboI GATC 2 cut(s) 181, 1171
MboII GAAGA 8 cut(s) 53, 197, 374, 386, 647, 878, 1199, 1202
MmeI TCCRAC 2 cut(s) 121, 1189
Mph1103I ATGCAT 2 cut(s) 807, 1084
MseI TTAA 8 cut(s) 162, 267, 299, 854, 1062, 1140, 1152, 1221
MslI CAYNNNNRTG 3 cut(s) 174, 892, 1264
MspA1I CMGCKG 1 cut(s) 76
MspR9I CCNGG 1 cut(s) 357
MvaI CCWGG 1 cut(s) 357
NdeI CATATG 2 cut(s) 58, 1204
NdeII GATC 2 cut(s) 181, 1171
NlaIII CATG 8 cut(s) 173, 233, 773, 793, 809, 952, 1021, 1086
NlaIV GGNNCC 2 cut(s) 354, 767
NsiI ATGCAT 2 cut(s) 807, 1084
NspI RCATGY 1 cut(s) 809
PceI AGGCCT 1 cut(s) 469
PfeI GAWTC 2 cut(s) 652, 730
PfoI TCCNGGA 1 cut(s) 355
PkrI GCNGC 2 cut(s) 442, 1237
Psp6I CCWGG 1 cut(s) 355
PspGI CCWGG 1 cut(s) 355
PspN4I GGNNCC 2 cut(s) 354, 767
PspPI GGNCC 2 cut(s) 187, 757
PvuII CAGCTG 1 cut(s) 76
RsaI GTAC 1 cut(s) 908
RsaNI GTAC 1 cut(s) 907
RseI CAYNNNNRTG 3 cut(s) 174, 892, 1264
SaqAI TTAA 8 cut(s) 162, 267, 299, 854, 1062, 1140, 1152, 1221
SatI GCNGC 2 cut(s) 441, 1236
Sau3AI GATC 2 cut(s) 181, 1171
Sau96I GGNCC 2 cut(s) 187, 757
ScrFI CCNGG 1 cut(s) 357
SfaNI GCATC 4 cut(s) 52, 62, 262, 1069
SfcI CTRYAG 1 cut(s) 840
SinI GGWCC 1 cut(s) 187
SmiMI CAYNNNNRTG 3 cut(s) 174, 892, 1264
SmlI CTYRAG 1 cut(s) 453
SmoI CTYRAG 1 cut(s) 453
SpeI ACTAGT 1 cut(s) 31
SseBI AGGCCT 1 cut(s) 469
SsiI CCGC 3 cut(s) 536, 962, 1236
SspMI CTAG 9 cut(s) 32, 104, 146, 437, 461, 485, 638, 738, 1002
StuI AGGCCT 1 cut(s) 469
StyD4I CCNGG 1 cut(s) 355
StyI CCWWGG 1 cut(s) 103
TaaI ACNGT 3 cut(s) 281, 841, 1120
TaqI TCGA 5 cut(s) 728, 929, 1053, 1111, 1263
TaqII GACCGA 1 cut(s) 1136
TauI GCSGC 1 cut(s) 1238
TfiI GAWTC 2 cut(s) 652, 730
Tru1I TTAA 8 cut(s) 162, 267, 299, 854, 1062, 1140, 1152, 1221
Tru9I TTAA 8 cut(s) 162, 267, 299, 854, 1062, 1140, 1152, 1221
TseI GCWGC 1 cut(s) 440
TspDTI ATGAA 7 cut(s) 57, 105, 153, 234, 786, 1034, 1209
VpaK11BI GGWCC 1 cut(s) 187
XagI CCTNNNNNAGG 1 cut(s) 752
XapI RAATTY 2 cut(s) 263, 1196
XbaI TCTAGA 1 cut(s) 484
XceI RCATGY 1 cut(s) 809
XmaJI CCTAGG 1 cut(s) 103
XmiI GTMKAC 1 cut(s) 217
XspI CTAG 9 cut(s) 32, 104, 146, 437, 461, 485, 638, 738, 1002
Zsp2I ATGCAT 2 cut(s) 807, 1084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.