MD12G1162900.v1.1

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0000053
Physical Location & Seq
Reverse (-)
24419467 .. 24426371
6905 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1162900.v1.1.491

Sequence Viewer

Length: 1410 bp
ATGTCTTCTGTCGAGGTTCCACTATCTCAATCTTCAAACCCAAATGATACTTTTAATGTTCATCGGCCTAAGCCTTCAGCCACTTTTTCTCCCAGCATTTGGGGCGACCATTTTCTGTCATATGCTTCTTTGGTATGCGATCTCGGAGTATATACAAACATATTTGACGGAATACCTGGGCTGGACGAATCCTATCTACCCAGATGGATTGGATATGGGTTTGGTTCGCTTTTAATTTTGAGCCATTTTGTTGGTTCCACTGCAACCCCAACACAGCTTGAAATGGATGCTGAACTTGAACAACATGTACAAGAACTGAAGGAAGAAGTAAGAAGGATGCTAACGACATCGCTTGAAAATGTTTCACAAAAGCTGAACTTCATTGATGACATTCAGCGCTTAGGTGTGTCTTACCATTTTAGAAATGAGATTGAACAAATTTTACAGAAAATTCACGCAAACTTTGATGATTTGGATGACCATATACTGCTGCTTTTCGTTTTCGATTGCTTAGACAACAAGGTTATAACATTTGATGCGGTAAATATATTCAACATGTTCAAGGACGGTGATGGAAAATTCAAGGAATCACTCGTTGATGATGTTGTAGGACTATTAAGCCAGTATGAAGCCACACAACTTAGGATACATGGAGAGGAGATACTAGATGAGGCACTAACCTTCACCACCACTCATCTTGAATCGGCTACGTACCGCTTAATCTCCCCCACTGCTTTACCAAGGGTTGAAGCAAGGTATTACTTGTCAGTCTACCAGGAACTAAGAGAATCACCGAATGAATCTCTCCTAACATTCGCCAAGTCGGATTTCAACCGACTGCAACGAGTCCATCAGAAAGAACTAAGCGAAATCACAAGATGGTGGGAGGATTTGGACGTGCCAAACAAGCTACCTTTTGTAAGAGACAGATTGGTTGATGTCTATTTCTGCTGGAGTTTGTCACTCTACTTTGAGCCCCAATATTCCTTTGGTAGGAGGACATTATGCAAAGTTACTGCTATAACATCCATTATGGACGACTTTTATGAAGCTTATGGAACATACGAAGAACTAGAGCTCTTTACTGAAGCTATCGAGAGGTGGCATTTCTCAGCCATGGATCAACTACCAGAGTATATGAAAGTCTGCTATCGGGCGTTGTTGGATATATACAGTGAAATTCATGAAAAGCTTGCGCATGAGGGCAAATTATATCCCATGCACCATGCAAGAGAAGCGATGAAAAAACTAGTTAGAAGCTACTTCAATGAAGCCAAATTGTTCCGCCAGAAGCACATACCATCACTGGATGAATACATGTCTGTATCACTCGTGACCAGCGGCTACCTGTTGCTAATAACCACATCCTTCGTTGGAATGGAAGAAGCTACAATAGACTCCTTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

470

Amino Acids

54.47

Weight (kDa)

4.88

Isoelectric Point (pI)

49.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 94 - 238 6.1e-36 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 297 - 466 1.5e-62 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 337 - 462 1.2e-32 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 527
Acc16I TGCGCA 1 cut(s) 1197
AccB7I CCANNNNNTGG 1 cut(s) 99
AccI GTMKAC 1 cut(s) 771
AciI CCGC 4 cut(s) 539, 715, 1285, 1341
AclWI GGATC 1 cut(s) 1128
AcsI RAATTY 4 cut(s) 438, 450, 578, 1179
AcuI CTGAAG 3 cut(s) 60, 338, 1107
AfaI GTAC 2 cut(s) 309, 713
AfeI AGCGCT 1 cut(s) 398
AfiI CCNNNNNNNGG 2 cut(s) 99, 993
AflIII ACRYGT 3 cut(s) 304, 555, 1317
AhlI ACTAGT 1 cut(s) 1249
AjiI CACGTC 1 cut(s) 898
AjnI CCWGG 2 cut(s) 175, 774
AjuI GAANNNNNNNTTGG 2 cut(s) 812, 844
AluBI AGCT 9 cut(s) 277, 373, 910, 1052, 1078, 1091, 1192, 1260, 1388
AluI AGCT 9 cut(s) 277, 373, 910, 1052, 1078, 1091, 1192, 1260, 1388
Alw21I GWGCWC 1 cut(s) 1080
Alw26I GTCTC 1 cut(s) 918
AlwI GGATC 1 cut(s) 1128
Aor51HI AGCGCT 1 cut(s) 398
AoxI GGCC 1 cut(s) 65
ApeKI GCWGC 1 cut(s) 490
ApoI RAATTY 4 cut(s) 438, 450, 578, 1179
AspLEI GCGC 2 cut(s) 399, 1198
AsuHPI GGTGA 3 cut(s) 581, 676, 783
BanII GRGCYC 2 cut(s) 978, 1080
BauI CACGAG 1 cut(s) 1331
Bbv12I GWGCWC 1 cut(s) 1080
BbvI GCAGC 1 cut(s) 477
BccI CCATC 5 cut(s) 198, 566, 858, 873, 1309
BciT130I CCWGG 2 cut(s) 177, 776
BciVI GTATCC 1 cut(s) 639
BcoDI GTCTC 1 cut(s) 918
BcuI ACTAGT 1 cut(s) 1249
BfaI CTAG 3 cut(s) 665, 1073, 1250
BfoI RGCGCY 1 cut(s) 400
BfuI GTATCC 1 cut(s) 639
BisI GCNGC 2 cut(s) 491, 1342
BlsI GCNGC 2 cut(s) 492, 1343
Bme1390I CCNGG 2 cut(s) 177, 776
BmgBI CACGTC 1 cut(s) 898
BmiI GGNNCC 2 cut(s) 18, 256
BmrFI CCNGG 2 cut(s) 177, 776
BmsI GCATC 3 cut(s) 277, 327, 526
BpmI CTGGAG 1 cut(s) 973
Bpu10I CCTNAGC 2 cut(s) 69, 400
BsaAI YACGTR 1 cut(s) 711
BsaJI CCNNGG 3 cut(s) 176, 740, 1116
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bsc4I CCNNNNNNNGG 2 cut(s) 99, 993
Bse1I ACTGG 2 cut(s) 622, 1311
BseBI CCWGG 2 cut(s) 177, 776
BseDI CCNNGG 3 cut(s) 176, 740, 1116
BseGI GGATG 6 cut(s) 292, 342, 481, 1025, 1315, 1364
BseLI CCNNNNNNNGG 2 cut(s) 99, 993
BseMII CTCAG 1 cut(s) 1125
BseNI ACTGG 2 cut(s) 622, 1311
BseRI GAGGAG 1 cut(s) 671
BseXI GCAGC 1 cut(s) 477
BseYI CCCAGC 1 cut(s) 92
BshFI GGCC 1 cut(s) 67
BsiHKAI GWGCWC 1 cut(s) 1080
BslI CCNNNNNNNGG 2 cut(s) 99, 993
BsmAI GTCTC 1 cut(s) 918
BsnI GGCC 1 cut(s) 67
Bsp1286I GDGCHC 2 cut(s) 978, 1080
Bsp1407I TGTACA 1 cut(s) 307
Bsp143I GATC 2 cut(s) 139, 1120
Bsp19I CCATGG 1 cut(s) 1116
BspACI CCGC 4 cut(s) 539, 715, 1285, 1341
BspANI GGCC 1 cut(s) 67
BspCNI CTCAG 1 cut(s) 1124
BspHI TCATGA 1 cut(s) 1183
BspLI GGNNCC 2 cut(s) 18, 256
BspPI GGATC 1 cut(s) 1128
BsrGI TGTACA 1 cut(s) 307
BsrI ACTGG 2 cut(s) 622, 1311
BssECI CCNNGG 3 cut(s) 176, 740, 1116
BssMI GATC 2 cut(s) 139, 1120
BssSI CACGAG 1 cut(s) 1331
BssT1I CCWWGG 2 cut(s) 740, 1116
Bst2BI CACGAG 1 cut(s) 1331
Bst2UI CCWGG 2 cut(s) 177, 776
Bst4CI ACNGT 2 cut(s) 569, 1175
BstAUI TGTACA 1 cut(s) 307
BstBAI YACGTR 1 cut(s) 711
BstC8I GCNNGC 1 cut(s) 1194
BstDEI CTNAG 7 cut(s) 69, 400, 511, 641, 782, 863, 1111
BstDSI CCRYGG 1 cut(s) 1116
BstENI CCTNNNNNAGG 1 cut(s) 991
BstF5I GGATG 6 cut(s) 292, 342, 481, 1025, 1315, 1364
BstH2I RGCGCY 1 cut(s) 400
BstHHI GCGC 2 cut(s) 399, 1198
BstKTI GATC 2 cut(s) 142, 1123
BstMAI GTCTC 1 cut(s) 918
BstMBI GATC 2 cut(s) 139, 1120
BstMWI GCNNNNNNNGC 3 cut(s) 102, 907, 1235
BstNI CCWGG 2 cut(s) 177, 776
BstNSI RCATGY 3 cut(s) 308, 559, 1321
BstSCI CCNGG 2 cut(s) 175, 774
BstSNI TACGTA 1 cut(s) 711
BstV1I GCAGC 1 cut(s) 477
BstXI CCANNNNNNTGG 1 cut(s) 251
BsuI GTATCC 1 cut(s) 639
BsuRI GGCC 1 cut(s) 67
BtgI CCRYGG 1 cut(s) 1116
BtgZI GCGATG 2 cut(s) 333, 1253
BtrI CACGTC 1 cut(s) 898
BtsCI GGATG 6 cut(s) 292, 342, 481, 1025, 1315, 1364
BtsI GCAGTG 2 cut(s) 258, 729
BtsIMutI CAGTG 4 cut(s) 258, 729, 1180, 1304
Cac8I GCNNGC 1 cut(s) 1194
CciI TCATGA 1 cut(s) 1183
CfoI GCGC 2 cut(s) 399, 1198
Csp6I GTAC 2 cut(s) 308, 712
CspCI CAANNNNNGTGG 2 cut(s) 679, 714
CviAII CATG 9 cut(s) 305, 556, 650, 1117, 1184, 1199, 1219, 1226, 1318
CviQI GTAC 2 cut(s) 308, 712
DdeI CTNAG 7 cut(s) 69, 400, 511, 641, 782, 863, 1111
DpnI GATC 2 cut(s) 141, 1122
DpnII GATC 2 cut(s) 139, 1120
EciI GGCGGA 1 cut(s) 1274
Ecl136II GAGCTC 1 cut(s) 1078
Eco105I TACGTA 1 cut(s) 711
Eco130I CCWWGG 2 cut(s) 740, 1116
Eco24I GRGCYC 2 cut(s) 978, 1080
Eco47III AGCGCT 1 cut(s) 398
Eco53kI GAGCTC 1 cut(s) 1078
Eco57I CTGAAG 3 cut(s) 60, 338, 1107
EcoICRI GAGCTC 1 cut(s) 1078
EcoNI CCTNNNNNAGG 1 cut(s) 991
EcoRII CCWGG 2 cut(s) 175, 774
EcoT14I CCWWGG 2 cut(s) 740, 1116
EcoT38I GRGCYC 2 cut(s) 978, 1080
ErhI CCWWGG 2 cut(s) 740, 1116
FaeI CATG 9 cut(s) 308, 559, 653, 1120, 1187, 1202, 1222, 1229, 1321
FalI AAGNNNNNCTT 2 cut(s) 362, 394
FatI CATG 9 cut(s) 304, 555, 649, 1116, 1183, 1198, 1218, 1225, 1317
FauNDI CATATG 1 cut(s) 121
FblI GTMKAC 1 cut(s) 771
Fnu4HI GCNGC 2 cut(s) 491, 1342
FokI GGATG 6 cut(s) 299, 349, 488, 1012, 1322, 1351
FriOI GRGCYC 2 cut(s) 978, 1080
Fsp4HI GCNGC 2 cut(s) 491, 1342
FspBI CTAG 3 cut(s) 665, 1073, 1250
FspI TGCGCA 1 cut(s) 1197
GlaI GCGC 2 cut(s) 398, 1197
GluI GCNGC 2 cut(s) 491, 1342
GsaI CCCAGC 1 cut(s) 96
GsuI CTGGAG 1 cut(s) 973
HaeII RGCGCY 1 cut(s) 400
HaeIII GGCC 1 cut(s) 67
HhaI GCGC 2 cut(s) 399, 1198
Hin1II CATG 9 cut(s) 308, 559, 653, 1120, 1187, 1202, 1222, 1229, 1321
Hin6I GCGC 2 cut(s) 397, 1196
HinP1I GCGC 2 cut(s) 397, 1196
HindIII AAGCTT 2 cut(s) 1050, 1190
HinfI GANTC 7 cut(s) 188, 587, 701, 788, 800, 846, 1397
HphI GGTGA 3 cut(s) 581, 676, 783
Hpy166II GTNNAC 1 cut(s) 772
Hpy188I TCNGA 3 cut(s) 146, 826, 855
Hpy188III TCNNGA 4 cut(s) 698, 1096, 1184, 1333
Hpy8I GTNNAC 1 cut(s) 772
HpyAV CCTTC 5 cut(s) 84, 313, 327, 691, 1378
HpyCH4III ACNGT 2 cut(s) 569, 1175
HpyCH4IV ACGT 2 cut(s) 710, 897
HpyCH4V TGCA 5 cut(s) 263, 841, 1008, 1222, 1229
HpyF10VI GCNNNNNNNGC 3 cut(s) 102, 907, 1235
HpyF3I CTNAG 7 cut(s) 69, 400, 511, 641, 782, 863, 1111
HpySE526I ACGT 2 cut(s) 710, 897
Hsp92II CATG 9 cut(s) 308, 559, 653, 1120, 1187, 1202, 1222, 1229, 1321
HspAI GCGC 2 cut(s) 397, 1196
Kzo9I GATC 2 cut(s) 139, 1120
Lsp1109I GCAGC 1 cut(s) 477
LweI GCATC 3 cut(s) 277, 327, 526
MaeI CTAG 3 cut(s) 665, 1073, 1250
MaeII ACGT 2 cut(s) 710, 897
MaeIII GTNAC 3 cut(s) 960, 1012, 1333
MalI GATC 2 cut(s) 141, 1122
MboI GATC 2 cut(s) 139, 1120
MboII GAAGA 4 cut(s) 24, 335, 1079, 1394
MhlI GDGCHC 2 cut(s) 978, 1080
MluCI AATT 7 cut(s) 234, 438, 450, 578, 1179, 1208, 1277
MlyI GAGTC 2 cut(s) 855, 1391
MmeI TCCRAC 3 cut(s) 804, 1143, 1354
MnlI CCTC 7 cut(s) 7, 649, 664, 880, 990, 1092, 1195
MseI TTAA 4 cut(s) 54, 233, 617, 719
MspA1I CMGCKG 1 cut(s) 1341
MspR9I CCNGG 2 cut(s) 177, 776
MvaI CCWGG 2 cut(s) 177, 776
MwoI GCNNNNNNNGC 3 cut(s) 102, 907, 1235
NcoI CCATGG 1 cut(s) 1116
NdeI CATATG 1 cut(s) 121
NdeII GATC 2 cut(s) 139, 1120
NlaIII CATG 9 cut(s) 308, 559, 653, 1120, 1187, 1202, 1222, 1229, 1321
NlaIV GGNNCC 2 cut(s) 18, 256
NmuCI GTSAC 2 cut(s) 960, 1333
NsbI TGCGCA 1 cut(s) 1197
NspI RCATGY 3 cut(s) 308, 559, 1321
PagI TCATGA 1 cut(s) 1183
PciI ACATGT 3 cut(s) 304, 555, 1317
PfeI GAWTC 5 cut(s) 188, 587, 701, 788, 800
PflMI CCANNNNNTGG 1 cut(s) 99
PkrI GCNGC 2 cut(s) 492, 1343
PleI GAGTC 2 cut(s) 854, 1391
PpsI GAGTC 2 cut(s) 854, 1391
Ppu21I YACGTR 1 cut(s) 711
PscI ACATGT 3 cut(s) 304, 555, 1317
PsiI TTATAA 1 cut(s) 527
Psp124BI GAGCTC 1 cut(s) 1080
Psp6I CCWGG 2 cut(s) 175, 774
PspFI CCCAGC 1 cut(s) 92
PspGI CCWGG 2 cut(s) 175, 774
PspN4I GGNNCC 2 cut(s) 18, 256
PsrI GAACNNNNNNTAC 4 cut(s) 291, 323, 426, 458
RsaI GTAC 2 cut(s) 309, 713
RsaNI GTAC 2 cut(s) 308, 712
SacI GAGCTC 1 cut(s) 1080
SaqAI TTAA 4 cut(s) 54, 233, 617, 719
SatI GCNGC 2 cut(s) 491, 1342
Sau3AI GATC 2 cut(s) 139, 1120
SchI GAGTC 2 cut(s) 855, 1391
ScrFI CCNGG 2 cut(s) 177, 776
SduI GDGCHC 2 cut(s) 978, 1080
SfaNI GCATC 3 cut(s) 277, 327, 526
SnaBI TACGTA 1 cut(s) 711
SpeI ACTAGT 1 cut(s) 1249
Sse9I AATT 7 cut(s) 234, 438, 450, 578, 1179, 1208, 1277
SsiI CCGC 4 cut(s) 539, 715, 1285, 1341
SspI AATATT 1 cut(s) 983
SspMI CTAG 3 cut(s) 665, 1073, 1250
SstI GAGCTC 1 cut(s) 1080
StyD4I CCNGG 2 cut(s) 175, 774
StyI CCWWGG 2 cut(s) 740, 1116
TaaI ACNGT 2 cut(s) 569, 1175
TaiI ACGT 2 cut(s) 713, 900
TaqI TCGA 3 cut(s) 12, 504, 1095
TasI AATT 7 cut(s) 234, 438, 450, 578, 1179, 1208, 1277
TatI WGTACW 1 cut(s) 307
TauI GCSGC 1 cut(s) 1344
TfiI GAWTC 5 cut(s) 188, 587, 701, 788, 800
Tru1I TTAA 4 cut(s) 54, 233, 617, 719
Tru9I TTAA 4 cut(s) 54, 233, 617, 719
TscAI CASTG 4 cut(s) 265, 736, 1180, 1311
TseFI GTSAC 2 cut(s) 960, 1333
TseI GCWGC 1 cut(s) 490
Tsp45I GTSAC 2 cut(s) 960, 1333
TspGWI ACGGA 1 cut(s) 183
TspRI CASTG 4 cut(s) 265, 736, 1180, 1311
Van91I CCANNNNNTGG 1 cut(s) 99
XagI CCTNNNNNAGG 1 cut(s) 991
XapI RAATTY 4 cut(s) 438, 450, 578, 1179
XceI RCATGY 3 cut(s) 308, 559, 1321
XcmI CCANNNNNNNNNTGG 1 cut(s) 986
XmiI GTMKAC 1 cut(s) 771
XspI CTAG 3 cut(s) 665, 1073, 1250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.