FvH4_7g03620

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000053
Physical Location & Seq
Reverse (-)
3979904 .. 3982742
2839 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g03620.t1

Sequence Viewer

Length: 1701 bp
ATGTCGACTGTCCCTGCTGCTTTAGCGCCTGAGCTAGCTCACAGTAGTACGACTAGTACCCCCAATATTACTGCCACTCTCGACGTAATTACTCGACGTGTAGCTAATTTTTCCCCGAGCGTTTGGGGTGATCATTTTCTTTCATATTCTTCCATGGAAGCGGCAGATGGTAAAAGCAAGAAACATGTCCACGACTTGAAGGAAGAACTGAAGAGAATGATATTGGCTCCAGCGGAAAGGCCTTCACAGAAATTGCACTTCATCAACAACATTCAGCGCTTGGGTGTCTCATACCATTTCCAAAATGAGATTGACAAAATTTTGGAGCAAGTTCACCGAGAAGAAGATGATGATGATGCTGATCTTTGCACCACTGCCCTAAAGTTTCGATTGCTTAGACAACAAGGTTATAACGCTTCATGCAATATGTTTAACAAGCTCAAAGATGATGATGGAAAATTTAAAGAATCGGATATTAATGATGTAGTTGGCCTGTTAAGCTTGTATGAAGCCTCCCATCTTTTGGTGCCCGGGGAGGATGCACTAATGGAGGCACTAACCTTCTGCACAACTCATCTCGAGTCCGCAGCGCACCGCTTAATTCCATCATCTCAGCTTTCCAAACAAGTAACTCATGCCTTGTATCAGCCACTTTGGAAGGGCATGCCAAGGATTGAAGCGAGGCATTACCTGTCTGTTTACCAAGAAGATGAATCAAATAATGAAACTCTCCTGAATTTTGCAAAGTTGGATTTCAACTTTGTGCAGAAAGTCCATCAGAAAGAACTAAGCGAAATTACGAGGTGGTGGAAGGACTTGGACTTTGCAACCAAGCTACCCTTTGCAAGAGACAGAGTAGTTGAGGCTTATTTTTGGGCTCTGGGAGTCTACTTTGAGCCGGAATATTACTTTGCCAGGATGATATCAGCTAAAGCTACTTCTATAATTACAGTCATTGACGACATATATGATGTGCACGGCACGTATGAAGAACTGAAGAGCTTTACTGAAGCTATTGAGAGGTGGGACATTTCTGCTGTTGATCAACTGCCAGATTATATGAAAGTTTGTTATACAGCTCTGTTGAATTTCTTCACCGAGATTGAAGAAAGTTTAGCAAACAAGGGAATCTCATACCGGCTCCACTATGCGAGAGAAGGATTTAAAGTTCAAGTAAGAGCCTACTTCCAGGAAGCAAAATGGTTCAAACAAAAGTACACACCAACACTGGAAGAGTATATGTCTGTGGAACGCTATACATCCTTCTTCATGGTAGCAATAGTGTCATTTGTTGGATTGGGAGCTATTGTTACTGAAGACTCCATGGATTGGGTTTTCAGTGAACCTAAGATTTTAAAAGCCACATCTATAATTGGCAGACTCATGAATGACCTTGTAGGCCACAAGTTTGAGCAAAAGAGAGAACATAATGCTTCAGCCATTGAATGCTACATGAAGCAATATGGTGCCACAGAAGAAGAAGCAGAAGTTGAGCTAACGAAACAAGTGAATGAAGCTTGGAAAGACATAAACGAAGAGTGGCTCGAGGCCACACCTATCCCTAGGCTGCTACTCTCTCTGATTTTGAACTTTGCACGTACTAGTGAACTGCTGTACAAGGGTGAAGATGTGTATACTCATTCTGGAAATGTGCTCAAGGGTTACGTTGCTTCCCTCTTTATCGAATCTGTGCCCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

567

Amino Acids

65.18

Weight (kDa)

5.26

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 41 - 214 6.8e-56 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 271 - 509 5.9e-96 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 312 - 509 8.7e-57 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 411
AccB1I GGYRCC 2 cut(s) 526, 1466
AccB7I CCANNNNNTGG 2 cut(s) 523, 1329
AccI GTMKAC 3 cut(s) 5, 888, 1634
AciI CCGC 4 cut(s) 161, 233, 585, 595
AcsI RAATTY 4 cut(s) 318, 458, 736, 1087
AcuI CTGAAG 5 cut(s) 230, 1016, 1029, 1335, 1419
AfaI GTAC 5 cut(s) 49, 58, 1217, 1600, 1616
AfeI AGCGCT 1 cut(s) 278
AfiI CCNNNNNNNGG 2 cut(s) 523, 1329
AflIII ACRYGT 2 cut(s) 97, 184
AgsI TTSAA 9 cut(s) 199, 677, 757, 1087, 1106, 1172, 1207, 1445, 1588
AhlI ACTAGT 2 cut(s) 53, 1601
AjiI CACGTC 1 cut(s) 98
AjnI CCWGG 2 cut(s) 914, 1188
AloI GAACNNNNNNTCC 2 cut(s) 1152, 1184
Alw21I GWGCWC 2 cut(s) 978, 1656
Alw26I GTCTC 2 cut(s) 292, 843
Alw44I GTGCAC 1 cut(s) 974
Ama87I CYCGRG 4 cut(s) 115, 530, 578, 1544
Aor51HI AGCGCT 1 cut(s) 278
AoxI GGCC 4 cut(s) 239, 490, 1399, 1548
ApaLI GTGCAC 1 cut(s) 974
ApeKI GCWGC 3 cut(s) 17, 587, 1567
ApoI RAATTY 4 cut(s) 318, 458, 736, 1087
ArsI GACNNNNNNTTYG 2 cut(s) 806, 838
AseI ATTAAT 1 cut(s) 477
Asp700I GAANNNNTTC 1 cut(s) 1091
AspA2I CCTAGG 1 cut(s) 1562
AspLEI GCGC 3 cut(s) 28, 279, 592
AsuC2I CCSGG 2 cut(s) 531, 532
AsuHPI GGTGA 4 cut(s) 140, 326, 1087, 1634
AsuNHI GCTAGC 1 cut(s) 34
AvaI CYCGRG 4 cut(s) 115, 530, 578, 1544
AvrII CCTAGG 1 cut(s) 1562
BaeGI GKGCMC 3 cut(s) 531, 978, 1695
BanI GGYRCC 2 cut(s) 526, 1466
BanII GRGCYC 1 cut(s) 880
BbsI GAAGAC 1 cut(s) 1323
Bbv12I GWGCWC 2 cut(s) 978, 1656
BbvI GCAGC 3 cut(s) 4, 599, 1554
BccI CCATC 5 cut(s) 161, 446, 525, 613, 783
BceAI ACGGC 1 cut(s) 994
BciT130I CCWGG 2 cut(s) 916, 1190
BclI TGATCA 2 cut(s) 130, 1042
BcnI CCSGG 2 cut(s) 531, 532
BcoDI GTCTC 2 cut(s) 292, 843
BcuI ACTAGT 2 cut(s) 53, 1601
BfaI CTAG 4 cut(s) 35, 54, 1563, 1602
BfoI RGCGCY 2 cut(s) 29, 280
BisI GCNGC 4 cut(s) 18, 162, 588, 1568
BlnI CCTAGG 1 cut(s) 1562
BlsI GCNGC 4 cut(s) 19, 163, 589, 1569
Bme1390I CCNGG 4 cut(s) 531, 532, 916, 1190
BmeT110I CYCGRG 4 cut(s) 115, 530, 578, 1544
BmgBI CACGTC 1 cut(s) 98
BmiI GGNNCC 4 cut(s) 228, 528, 1142, 1468
BmrFI CCNGG 4 cut(s) 531, 532, 916, 1190
BmsI GCATC 2 cut(s) 346, 529
BmtI GCTAGC 1 cut(s) 38
BpiI GAAGAC 1 cut(s) 1323
BpmI CTGGAG 1 cut(s) 213
Bpu10I CCTNAGC 1 cut(s) 30
BpuEI CTTGAG 1 cut(s) 1640
BpuMI CCSGG 2 cut(s) 531, 532
BsaAI YACGTR 2 cut(s) 984, 1598
BsaBI GATNNNNATC 1 cut(s) 360
BsaJI CCNNGG 6 cut(s) 153, 530, 531, 668, 1323, 1562
BsaXI ACNNNNNCTCC 2 cut(s) 1293, 1323
Bsc4I CCNNNNNNNGG 2 cut(s) 523, 1329
Bse118I RCCGGY 1 cut(s) 1137
Bse1I ACTGG 1 cut(s) 1233
Bse8I GATNNNNATC 1 cut(s) 360
BseBI CCWGG 2 cut(s) 916, 1190
BseDI CCNNGG 6 cut(s) 153, 530, 531, 668, 1323, 1562
BseGI GGATG 3 cut(s) 544, 924, 1259
BseJI GATNNNNATC 1 cut(s) 360
BseLI CCNNNNNNNGG 2 cut(s) 523, 1329
BseMII CTCAG 2 cut(s) 21, 626
BseNI ACTGG 1 cut(s) 1233
BseSI GKGCMC 3 cut(s) 531, 978, 1695
BseXI GCAGC 3 cut(s) 4, 599, 1554
BsgI GTGCAG 2 cut(s) 550, 785
BshFI GGCC 4 cut(s) 241, 492, 1401, 1550
BshNI GGYRCC 2 cut(s) 526, 1466
BsiHKAI GWGCWC 2 cut(s) 978, 1656
BsiHKCI CYCGRG 4 cut(s) 115, 530, 578, 1544
BsiSI CCGG 3 cut(s) 531, 899, 1138
BslFI GGGAC 1 cut(s) 1040
BslI CCNNNNNNNGG 2 cut(s) 523, 1329
BsmAI GTCTC 2 cut(s) 292, 843
BsmFI GGGAC 1 cut(s) 1040
BsmI GAATGC 1 cut(s) 1451
BsnI GGCC 4 cut(s) 241, 492, 1401, 1550
BsoBI CYCGRG 4 cut(s) 115, 530, 578, 1544
Bsp1286I GDGCHC 5 cut(s) 531, 880, 978, 1656, 1695
Bsp1407I TGTACA 1 cut(s) 1614
Bsp143I GATC 3 cut(s) 130, 361, 1042
Bsp19I CCATGG 2 cut(s) 153, 1323
BspACI CCGC 4 cut(s) 161, 233, 585, 595
BspANI GGCC 4 cut(s) 241, 492, 1401, 1550
BspCNI CTCAG 2 cut(s) 22, 625
BspHI TCATGA 1 cut(s) 1383
BspLI GGNNCC 4 cut(s) 228, 528, 1142, 1468
BspOI GCTAGC 1 cut(s) 38
BspQI GCTCTTC 1 cut(s) 992
BspT107I GGYRCC 2 cut(s) 526, 1466
BsrFI RCCGGY 1 cut(s) 1137
BsrGI TGTACA 1 cut(s) 1614
BsrI ACTGG 1 cut(s) 1233
BssAI RCCGGY 1 cut(s) 1137
BssECI CCNNGG 6 cut(s) 153, 530, 531, 668, 1323, 1562
BssMI GATC 3 cut(s) 130, 361, 1042
BssNAI GTATAC 1 cut(s) 1635
BssT1I CCWWGG 4 cut(s) 153, 668, 1323, 1562
Bst1107I GTATAC 1 cut(s) 1635
Bst2UI CCWGG 2 cut(s) 916, 1190
Bst4CI ACNGT 3 cut(s) 10, 44, 952
Bst6I CTCTTC 4 cut(s) 206, 992, 1227, 1530
BstAUI TGTACA 1 cut(s) 1614
BstBAI YACGTR 2 cut(s) 984, 1598
BstC8I GCNNGC 2 cut(s) 36, 665
BstDEI CTNAG 5 cut(s) 30, 395, 612, 788, 1347
BstDSI CCRYGG 2 cut(s) 153, 1323
BstF5I GGATG 3 cut(s) 544, 924, 1259
BstH2I RGCGCY 2 cut(s) 29, 280
BstHHI GCGC 3 cut(s) 28, 279, 592
BstKTI GATC 3 cut(s) 133, 364, 1045
BstMAI GTCTC 2 cut(s) 292, 843
BstMBI GATC 3 cut(s) 130, 361, 1042
BstMWI GCNNNNNNNGC 2 cut(s) 23, 498
BstNI CCWGG 2 cut(s) 916, 1190
BstNSI RCATGY 2 cut(s) 188, 667
BstSCI CCNGG 4 cut(s) 529, 530, 914, 1188
BstSLI GKGCMC 3 cut(s) 531, 978, 1695
BstV1I GCAGC 3 cut(s) 4, 599, 1554
BstV2I GAAGAC 1 cut(s) 1323
BstZ17I GTATAC 1 cut(s) 1635
BsuRI GGCC 4 cut(s) 241, 492, 1401, 1550
BtgI CCRYGG 2 cut(s) 153, 1323
BtrI CACGTC 1 cut(s) 98
BtsCI GGATG 3 cut(s) 544, 924, 1259
BtsI GCAGTG 1 cut(s) 372
BtsIMutI CAGTG 3 cut(s) 372, 1226, 1345
Cac8I GCNNGC 2 cut(s) 36, 665
CciI TCATGA 1 cut(s) 1383
CfoI GCGC 3 cut(s) 28, 279, 592
Cfr10I RCCGGY 1 cut(s) 1137
Cfr9I CCCGGG 1 cut(s) 530
Csp6I GTAC 5 cut(s) 48, 57, 1216, 1599, 1615
CviQI GTAC 5 cut(s) 48, 57, 1216, 1599, 1615
DdeI CTNAG 5 cut(s) 30, 395, 612, 788, 1347
DpnI GATC 3 cut(s) 132, 363, 1044
DpnII GATC 3 cut(s) 130, 361, 1042
DraI TTTAAA 3 cut(s) 463, 1165, 1356
Eam1104I CTCTTC 4 cut(s) 206, 992, 1227, 1530
EarI CTCTTC 4 cut(s) 206, 992, 1227, 1530
Eco130I CCWWGG 4 cut(s) 153, 668, 1323, 1562
Eco147I AGGCCT 1 cut(s) 241
Eco24I GRGCYC 1 cut(s) 880
Eco32I GATATC 1 cut(s) 924
Eco47III AGCGCT 1 cut(s) 278
Eco57I CTGAAG 5 cut(s) 230, 1016, 1029, 1335, 1419
Eco88I CYCGRG 4 cut(s) 115, 530, 578, 1544
EcoRII CCWGG 2 cut(s) 914, 1188
EcoRV GATATC 1 cut(s) 924
EcoT14I CCWWGG 4 cut(s) 153, 668, 1323, 1562
EcoT38I GRGCYC 1 cut(s) 880
ErhI CCWWGG 4 cut(s) 153, 668, 1323, 1562
FalI AAGNNNNNCTT 2 cut(s) 824, 856
FaqI GGGAC 1 cut(s) 1040
FbaI TGATCA 2 cut(s) 130, 1042
FblI GTMKAC 3 cut(s) 5, 888, 1634
Fnu4HI GCNGC 4 cut(s) 18, 162, 588, 1568
FokI GGATG 3 cut(s) 551, 931, 1246
FriOI GRGCYC 1 cut(s) 880
Fsp4HI GCNGC 4 cut(s) 18, 162, 588, 1568
FspBI CTAG 4 cut(s) 35, 54, 1563, 1602
GlaI GCGC 3 cut(s) 27, 278, 591
GluI GCNGC 4 cut(s) 18, 162, 588, 1568
GsuI CTGGAG 1 cut(s) 213
HaeII RGCGCY 2 cut(s) 29, 280
HaeIII GGCC 4 cut(s) 241, 492, 1401, 1550
HapII CCGG 3 cut(s) 531, 899, 1138
HhaI GCGC 3 cut(s) 28, 279, 592
Hin6I GCGC 3 cut(s) 26, 277, 590
HinP1I GCGC 3 cut(s) 26, 277, 590
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 2 cut(s) 499, 1515
HinfI GANTC 8 cut(s) 467, 581, 713, 885, 1128, 1319, 1380, 1685
HpaII CCGG 3 cut(s) 531, 899, 1138
HphI GGTGA 4 cut(s) 140, 326, 1087, 1634
Hpy188I TCNGA 3 cut(s) 472, 780, 1581
Hpy188III TCNNGA 5 cut(s) 80, 578, 733, 1384, 1644
Hpy99I CGWCG 2 cut(s) 86, 99
HpyAV CCTTC 7 cut(s) 193, 252, 571, 652, 805, 1151, 1273
HpyCH4III ACNGT 3 cut(s) 10, 44, 952
HpyCH4IV ACGT 5 cut(s) 84, 97, 983, 1597, 1665
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 498
HpyF3I CTNAG 5 cut(s) 30, 395, 612, 788, 1347
HpySE526I ACGT 5 cut(s) 84, 97, 983, 1597, 1665
HspAI GCGC 3 cut(s) 26, 277, 590
Ksp22I TGATCA 2 cut(s) 130, 1042
Kzo9I GATC 3 cut(s) 130, 361, 1042
LguI GCTCTTC 1 cut(s) 992
LmnI GCTCC 4 cut(s) 232, 325, 1146, 1301
Lsp1109I GCAGC 3 cut(s) 4, 599, 1554
LweI GCATC 2 cut(s) 346, 529
MaeI CTAG 4 cut(s) 35, 54, 1563, 1602
MaeII ACGT 5 cut(s) 84, 97, 983, 1597, 1665
MaeIII GTNAC 3 cut(s) 628, 1309, 1661
MalI GATC 3 cut(s) 132, 363, 1044
MboI GATC 3 cut(s) 130, 361, 1042
MhlI GDGCHC 5 cut(s) 531, 880, 978, 1656, 1695
MlyI GAGTC 4 cut(s) 590, 894, 1313, 1374
MmeI TCCRAC 2 cut(s) 729, 1273
MnlI CCTC 9 cut(s) 523, 529, 544, 675, 795, 856, 1014, 1540, 1685
MroXI GAANNNNTTC 1 cut(s) 1091
MseI TTAA 7 cut(s) 432, 462, 477, 497, 599, 1164, 1355
MspA1I CMGCKG 1 cut(s) 233
MspI CCGG 3 cut(s) 531, 899, 1138
MspR9I CCNGG 4 cut(s) 531, 532, 916, 1190
Mva1269I GAATGC 1 cut(s) 1451
MvaI CCWGG 2 cut(s) 916, 1190
MwoI GCNNNNNNNGC 2 cut(s) 23, 498
NciI CCSGG 2 cut(s) 531, 532
NcoI CCATGG 2 cut(s) 153, 1323
NdeII GATC 3 cut(s) 130, 361, 1042
NheI GCTAGC 1 cut(s) 34
NlaIV GGNNCC 4 cut(s) 228, 528, 1142, 1468
NspI RCATGY 2 cut(s) 188, 667
PaeI GCATGC 1 cut(s) 667
PaeR7I CTCGAG 2 cut(s) 578, 1544
PagI TCATGA 1 cut(s) 1383
PceI AGGCCT 1 cut(s) 241
PciI ACATGT 1 cut(s) 184
PciSI GCTCTTC 1 cut(s) 992
PctI GAATGC 1 cut(s) 1451
PdmI GAANNNNTTC 1 cut(s) 1091
PfeI GAWTC 4 cut(s) 467, 713, 1128, 1685
PflMI CCANNNNNTGG 2 cut(s) 523, 1329
PfoI TCCNGGA 1 cut(s) 1188
PkrI GCNGC 4 cut(s) 19, 163, 589, 1569
PleI GAGTC 4 cut(s) 589, 893, 1313, 1374
PpsI GAGTC 4 cut(s) 589, 893, 1313, 1374
Ppu21I YACGTR 2 cut(s) 984, 1598
PscI ACATGT 1 cut(s) 184
PshBI ATTAAT 1 cut(s) 477
PsiI TTATAA 1 cut(s) 411
Psp6I CCWGG 2 cut(s) 914, 1188
PspGI CCWGG 2 cut(s) 914, 1188
PspN4I GGNNCC 4 cut(s) 228, 528, 1142, 1468
PspXI VCTCGAGB 1 cut(s) 1544
RsaI GTAC 5 cut(s) 49, 58, 1217, 1600, 1616
RsaNI GTAC 5 cut(s) 48, 57, 1216, 1599, 1615
SalI GTCGAC 1 cut(s) 4
SapI GCTCTTC 1 cut(s) 992
SaqAI TTAA 7 cut(s) 432, 462, 477, 497, 599, 1164, 1355
SatI GCNGC 4 cut(s) 18, 162, 588, 1568
Sau3AI GATC 3 cut(s) 130, 361, 1042
SchI GAGTC 4 cut(s) 590, 894, 1313, 1374
ScrFI CCNGG 4 cut(s) 531, 532, 916, 1190
SduI GDGCHC 5 cut(s) 531, 880, 978, 1656, 1695
SfaNI GCATC 2 cut(s) 346, 529
Sfr274I CTCGAG 2 cut(s) 578, 1544
SlaI CTCGAG 2 cut(s) 578, 1544
SmaI CCCGGG 1 cut(s) 532
SmlI CTYRAG 3 cut(s) 578, 1544, 1655
SmoI CTYRAG 3 cut(s) 578, 1544, 1655
SpeI ACTAGT 2 cut(s) 53, 1601
SphI GCATGC 1 cut(s) 667
SseBI AGGCCT 1 cut(s) 241
SsiI CCGC 4 cut(s) 161, 233, 585, 595
SspI AATATT 2 cut(s) 67, 905
SspMI CTAG 4 cut(s) 35, 54, 1563, 1602
StuI AGGCCT 1 cut(s) 241
StyD4I CCNGG 4 cut(s) 529, 530, 914, 1188
StyI CCWWGG 4 cut(s) 153, 668, 1323, 1562
TaaI ACNGT 3 cut(s) 10, 44, 952
TaiI ACGT 5 cut(s) 87, 100, 986, 1600, 1668
TaqI TCGA 7 cut(s) 5, 81, 94, 388, 579, 1545, 1683
TatI WGTACW 2 cut(s) 1215, 1614
TauI GCSGC 1 cut(s) 164
TfiI GAWTC 4 cut(s) 467, 713, 1128, 1685
Tru1I TTAA 7 cut(s) 432, 462, 477, 497, 599, 1164, 1355
Tru9I TTAA 7 cut(s) 432, 462, 477, 497, 599, 1164, 1355
TscAI CASTG 3 cut(s) 379, 1233, 1345
TseI GCWGC 3 cut(s) 17, 587, 1567
TspMI CCCGGG 1 cut(s) 530
TspRI CASTG 3 cut(s) 379, 1233, 1345
Van91I CCANNNNNTGG 2 cut(s) 523, 1329
VneI GTGCAC 1 cut(s) 974
VspI ATTAAT 1 cut(s) 477
XapI RAATTY 4 cut(s) 318, 458, 736, 1087
XceI RCATGY 2 cut(s) 188, 667
XhoI CTCGAG 2 cut(s) 578, 1544
XmaI CCCGGG 1 cut(s) 530
XmaJI CCTAGG 1 cut(s) 1562
XmiI GTMKAC 3 cut(s) 5, 888, 1634
XmnI GAANNNNTTC 1 cut(s) 1091
XspI CTAG 4 cut(s) 35, 54, 1563, 1602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.