FvH4_7g13030

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000053
Physical Location & Seq
Forward (+)
11748388 .. 11751599
3212 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g13030.t2

Sequence Viewer

Length: 1383 bp
ATGACCACGTATCCTATAATGATCTTCATCAGAATAATTCCGACCTTCATGCAGTTTCTCTTCGTTTCAGATTACTTAGACAACAAGGATACAATGCTTCGTGTGGACAAGTATTTCAGCAACTTGAAGGACAATGATGGGAAATTCAAGGAATCACTTGTCGATGATACAAAAGGACTACTAGGCTTGTACGAAGCAACACATCTTCGGATACACGGTGATGATATACTTGATGAGGCACTAACCTTCACTACAACTCATCTCCAGTCTGCAACACGCCGCGGTTTGAGCTCCCCACTTTCAAAACAAGTTACTCATTCCTTGAATCAGCCATTCTGGAAAAGGATGCCAAGGATAGAAGCGAGGCATTACATATCTATCTACCAAGAAGACAAATATTCTCATAATGAAACTCTCTTGAATTTCGCACGGCTAGATTTCAACCTACTGCAGCAACTCCATCAAAAAGAACTATGTGAACTTACAAGGTGGTGGAAGGATTTAGACTTCGTGAAAAAGTTACCTTTCACAAGAAATAGGCTGGTTGAGTGCTACTTCATCGCCTTGGGTATCTTCTTTGAGCCAGAATATTATTTTGGTAGGAGGACATTCTGCAAAGTTATCTACATGTTATCCGCGATTGATGACATCTATGATGTTCATGGTACACTTGAAGAGCTCGAGCTCTTCCACGAAGCTATTCAGAGGTGGGACATCTCTGCCCTGGATCAGTCGCCGGACTATATGAAAGTCTGTTTCCAGGCACAGTTGGATGTCTTCACTGAAATTGAAGAAAAGATTACAAGCGAGGGAAACTTGTATGCCATTCACCATGCAAGAGAATCGTTGAAAATGACCGTCGCTGGTTACATGAAAGAAGCTAGATGGTTTTACTCTAAATACACCCCAACTTTTGATGAATACATGCCGCTAGGAACACTTACATCCTCATATTATTTATCAATCACCGCTGTTGTTGGAATGGGACTTGCTGCTACAAAAGACTCCTTGGATTGGTTATTCACTGACCCTGGAATCTTAAATGCTACATCAGTCATTGGCAGACTCTTAAACGACATCAGGACGCATCAGAGAGAGCATGTTGCTTCAGCCGTGGAATTATACATGAAAGAACATGGTGCTACAGAAGAAGAAGCCATAGAGGAACTAACTAATCAAGTGAATGATGCATGGAAGGTTATAATCAAAGCTTGTCTCCACCCTACCCCAGTCTCATTGCCGGTTCTAATGCGACCTCTCAGAGTAGCAAGTACTTGGGAAGTTCTTTACAAGAGTGCAGATTCATACACGAGCCCTGGGGTTGAGTTGAAGGGAATAGTGACTTCTCTGCTAATCGAACCTGTGCCTAATGCATTAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

461

Amino Acids

53.28

Weight (kDa)

5.5

Isoelectric Point (pI)

49.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 38 - 108 1.1e-20 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 166 - 399 4.5e-87 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 206 - 399 3.5e-50 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1202
AccII CGCG 2 cut(s) 282, 638
AciI CCGC 5 cut(s) 280, 282, 636, 929, 969
AclWI GGATC 1 cut(s) 735
AcsI RAATTY 2 cut(s) 143, 421
AcuI CTGAAG 1 cut(s) 1092
AfaI GTAC 3 cut(s) 191, 667, 1273
AfiI CCNNNNNNNGG 1 cut(s) 1014
AflIII ACRYGT 1 cut(s) 627
AjnI CCWGG 4 cut(s) 723, 759, 1030, 1315
AjuI GAANNNNNNNTTGG 2 cut(s) 579, 611
AluBI AGCT 6 cut(s) 291, 679, 685, 698, 881, 1211
AluI AGCT 6 cut(s) 291, 679, 685, 698, 881, 1211
Alw21I GWGCWC 3 cut(s) 293, 681, 687
Alw26I GTCTC 2 cut(s) 1220, 1237
AlwI GGATC 1 cut(s) 735
Ama87I CYCGRG 1 cut(s) 680
ApeKI GCWGC 2 cut(s) 451, 992
ApoI RAATTY 2 cut(s) 143, 421
Asp700I GAANNNNTTC 1 cut(s) 699
AsuHPI GGTGA 3 cut(s) 230, 821, 958
AvaI CYCGRG 1 cut(s) 680
BanII GRGCYC 4 cut(s) 293, 681, 687, 1316
BauI CACGAG 1 cut(s) 1309
BbsI GAAGAC 2 cut(s) 396, 769
Bbv12I GWGCWC 3 cut(s) 293, 681, 687
BbvI GCAGC 2 cut(s) 463, 979
BccI CCATC 3 cut(s) 131, 468, 879
BceAI ACGGC 2 cut(s) 446, 1097
BcgI CGANNNNNNTGC 4 cut(s) 31, 65, 825, 859
BciT130I CCWGG 4 cut(s) 725, 761, 1032, 1317
BciVI GTATCC 3 cut(s) 21, 82, 204
BcoDI GTCTC 2 cut(s) 1220, 1237
BfaI CTAG 4 cut(s) 182, 434, 882, 932
BfmI CTRYAG 2 cut(s) 449, 1143
BfuI GTATCC 3 cut(s) 21, 82, 204
BisI GCNGC 4 cut(s) 280, 452, 929, 993
BlsI GCNGC 4 cut(s) 281, 453, 930, 994
BmcAI AGTACT 1 cut(s) 1273
Bme1390I CCNGG 4 cut(s) 725, 761, 1032, 1317
BmeT110I CYCGRG 1 cut(s) 680
BmrFI CCNGG 4 cut(s) 725, 761, 1032, 1317
BmrI ACTGGG 1 cut(s) 1223
BmsI GCATC 3 cut(s) 336, 1096, 1177
BmuI ACTGGG 1 cut(s) 1223
BpiI GAAGAC 2 cut(s) 396, 769
BpmI CTGGAG 1 cut(s) 248
BsaAI YACGTR 1 cut(s) 9
BsaBI GATNNNNATC 1 cut(s) 26
BsaJI CCNNGG 9 cut(s) 280, 350, 564, 723, 1008, 1030, 1113, 1315, 1316
Bsc4I CCNNNNNNNGG 1 cut(s) 1014
Bse118I RCCGGY 1 cut(s) 1240
Bse1I ACTGG 2 cut(s) 265, 1229
Bse3DI GCAATG 1 cut(s) 1235
Bse8I GATNNNNATC 1 cut(s) 26
BseBI CCWGG 4 cut(s) 725, 761, 1032, 1317
BseDI CCNNGG 9 cut(s) 280, 350, 564, 723, 1008, 1030, 1113, 1315, 1316
BseGI GGATG 3 cut(s) 351, 778, 944
BseJI GATNNNNATC 1 cut(s) 26
BseLI CCNNNNNNNGG 1 cut(s) 1014
BseMI GCAATG 1 cut(s) 1235
BseMII CTCAG 1 cut(s) 1273
BseNI ACTGG 2 cut(s) 265, 1229
BseXI GCAGC 2 cut(s) 463, 979
BsgI GTGCAG 1 cut(s) 1317
Bsh1236I CGCG 2 cut(s) 282, 638
BsiHKAI GWGCWC 3 cut(s) 293, 681, 687
BsiHKCI CYCGRG 1 cut(s) 680
BsiSI CCGG 2 cut(s) 737, 1241
BslFI GGGAC 2 cut(s) 725, 999
BslI CCNNNNNNNGG 1 cut(s) 1014
BsmAI GTCTC 2 cut(s) 1220, 1237
BsmFI GGGAC 2 cut(s) 725, 999
BsoBI CYCGRG 1 cut(s) 680
Bsp1286I GDGCHC 4 cut(s) 293, 681, 687, 1316
Bsp143I GATC 2 cut(s) 21, 727
BspACI CCGC 5 cut(s) 280, 282, 636, 929, 969
BspCNI CTCAG 1 cut(s) 1272
BspFNI CGCG 2 cut(s) 282, 638
BspMAI CTGCAG 1 cut(s) 453
BspPI GGATC 1 cut(s) 735
BspQI GCTCTTC 2 cut(s) 669, 692
BsrDI GCAATG 1 cut(s) 1235
BsrFI RCCGGY 1 cut(s) 1240
BsrI ACTGG 2 cut(s) 265, 1229
BssAI RCCGGY 1 cut(s) 1240
BssECI CCNNGG 9 cut(s) 280, 350, 564, 723, 1008, 1030, 1113, 1315, 1316
BssMI GATC 2 cut(s) 21, 727
BssSI CACGAG 1 cut(s) 1309
BssT1I CCWWGG 3 cut(s) 350, 564, 1008
Bst2BI CACGAG 1 cut(s) 1309
Bst2UI CCWGG 4 cut(s) 725, 761, 1032, 1317
Bst4CI ACNGT 3 cut(s) 218, 768, 859
Bst6I CTCTTC 3 cut(s) 65, 669, 692
BstBAI YACGTR 1 cut(s) 9
BstDEI CTNAG 2 cut(s) 76, 1259
BstDSI CCRYGG 2 cut(s) 280, 1113
BstF5I GGATG 3 cut(s) 351, 778, 944
BstFNI CGCG 2 cut(s) 282, 638
BstKTI GATC 2 cut(s) 24, 730
BstMAI GTCTC 2 cut(s) 1220, 1237
BstMBI GATC 2 cut(s) 21, 727
BstMWI GCNNNNNNNGC 1 cut(s) 288
BstNI CCWGG 4 cut(s) 725, 761, 1032, 1317
BstNSI RCATGY 3 cut(s) 631, 928, 1103
BstSCI CCNGG 4 cut(s) 723, 759, 1030, 1315
BstSFI CTRYAG 2 cut(s) 449, 1143
BstUI CGCG 2 cut(s) 282, 638
BstV1I GCAGC 2 cut(s) 463, 979
BstV2I GAAGAC 2 cut(s) 396, 769
BsuI GTATCC 3 cut(s) 21, 82, 204
BtgI CCRYGG 2 cut(s) 280, 1113
BtgZI GCGATG 1 cut(s) 544
BtsCI GGATG 3 cut(s) 351, 778, 944
BtsIMutI CAGTG 2 cut(s) 780, 1023
Cfr10I RCCGGY 1 cut(s) 1240
Cfr42I CCGCGG 1 cut(s) 283
CseI GACGC 1 cut(s) 1093
Csp6I GTAC 3 cut(s) 190, 666, 1272
CviQI GTAC 3 cut(s) 190, 666, 1272
DdeI CTNAG 2 cut(s) 76, 1259
DpnI GATC 2 cut(s) 23, 729
DpnII GATC 2 cut(s) 21, 727
Eam1104I CTCTTC 3 cut(s) 65, 669, 692
EarI CTCTTC 3 cut(s) 65, 669, 692
Ecl136II GAGCTC 3 cut(s) 291, 679, 685
Eco130I CCWWGG 3 cut(s) 350, 564, 1008
Eco24I GRGCYC 4 cut(s) 293, 681, 687, 1316
Eco53kI GAGCTC 3 cut(s) 291, 679, 685
Eco57I CTGAAG 1 cut(s) 1092
Eco88I CYCGRG 1 cut(s) 680
EcoICRI GAGCTC 3 cut(s) 291, 679, 685
EcoRII CCWGG 4 cut(s) 723, 759, 1030, 1315
EcoT14I CCWWGG 3 cut(s) 350, 564, 1008
EcoT22I ATGCAT 2 cut(s) 1192, 1375
EcoT38I GRGCYC 4 cut(s) 293, 681, 687, 1316
ErhI CCWWGG 3 cut(s) 350, 564, 1008
FaqI GGGAC 2 cut(s) 725, 999
Fnu4HI GCNGC 4 cut(s) 280, 452, 929, 993
FokI GGATG 3 cut(s) 358, 785, 931
FriOI GRGCYC 4 cut(s) 293, 681, 687, 1316
Fsp4HI GCNGC 4 cut(s) 280, 452, 929, 993
FspBI CTAG 4 cut(s) 182, 434, 882, 932
GluI GCNGC 4 cut(s) 280, 452, 929, 993
GsuI CTGGAG 1 cut(s) 248
HapII CCGG 2 cut(s) 737, 1241
HgaI GACGC 1 cut(s) 1093
HindIII AAGCTT 1 cut(s) 1209
HinfI GANTC 7 cut(s) 152, 325, 842, 1004, 1035, 1065, 1301
HpaII CCGG 2 cut(s) 737, 1241
HphI GGTGA 3 cut(s) 230, 821, 958
Hpy166II GTNNAC 3 cut(s) 106, 479, 668
Hpy188I TCNGA 7 cut(s) 32, 42, 70, 210, 705, 1092, 1262
Hpy188III TCNNGA 4 cut(s) 337, 418, 511, 1081
Hpy8I GTNNAC 3 cut(s) 106, 479, 668
Hpy99I CGWCG 1 cut(s) 863
HpyAV CCTTC 6 cut(s) 55, 121, 256, 490, 1189, 1324
HpyCH4III ACNGT 3 cut(s) 218, 768, 859
HpyCH4IV ACGT 1 cut(s) 8
HpyCH4V TGCA 8 cut(s) 52, 272, 451, 615, 836, 1190, 1298, 1373
HpyF10VI GCNNNNNNNGC 1 cut(s) 288
HpyF3I CTNAG 2 cut(s) 76, 1259
HpySE526I ACGT 1 cut(s) 8
KspI CCGCGG 1 cut(s) 283
Kzo9I GATC 2 cut(s) 21, 727
LguI GCTCTTC 2 cut(s) 669, 692
LmnI GCTCC 1 cut(s) 296
Lsp1109I GCAGC 2 cut(s) 463, 979
LweI GCATC 3 cut(s) 336, 1096, 1177
MaeI CTAG 4 cut(s) 182, 434, 882, 932
MaeII ACGT 1 cut(s) 8
MaeIII GTNAC 4 cut(s) 310, 519, 866, 1339
MalI GATC 2 cut(s) 23, 729
MboI GATC 2 cut(s) 21, 727
MhlI GDGCHC 4 cut(s) 293, 681, 687, 1316
MluCI AATT 5 cut(s) 36, 143, 421, 786, 1118
MlyI GAGTC 2 cut(s) 998, 1059
MmeI TCCRAC 3 cut(s) 65, 750, 958
MnlI CCTC 8 cut(s) 229, 357, 597, 699, 802, 958, 1156, 1266
Mph1103I ATGCAT 2 cut(s) 1192, 1375
MroXI GAANNNNTTC 1 cut(s) 699
MseI TTAA 2 cut(s) 1040, 1070
MslI CAYNNNNRTG 1 cut(s) 219
MspA1I CMGCKG 2 cut(s) 282, 971
MspI CCGG 2 cut(s) 737, 1241
MspR9I CCNGG 4 cut(s) 725, 761, 1032, 1317
MvaI CCWGG 4 cut(s) 725, 761, 1032, 1317
MvnI CGCG 2 cut(s) 282, 638
MwoI GCNNNNNNNGC 1 cut(s) 288
NdeII GATC 2 cut(s) 21, 727
NmuCI GTSAC 1 cut(s) 1339
NsiI ATGCAT 2 cut(s) 1192, 1375
NspI RCATGY 3 cut(s) 631, 928, 1103
PaeR7I CTCGAG 1 cut(s) 680
PasI CCCWGGG 1 cut(s) 1316
PciI ACATGT 1 cut(s) 627
PciSI GCTCTTC 2 cut(s) 669, 692
PdmI GAANNNNTTC 1 cut(s) 699
PfeI GAWTC 5 cut(s) 152, 325, 842, 1035, 1301
PkrI GCNGC 4 cut(s) 281, 453, 930, 994
PleI GAGTC 2 cut(s) 998, 1059
PpsI GAGTC 2 cut(s) 998, 1059
Ppu21I YACGTR 1 cut(s) 9
PscI ACATGT 1 cut(s) 627
PsiI TTATAA 1 cut(s) 1202
Psp124BI GAGCTC 3 cut(s) 293, 681, 687
Psp6I CCWGG 4 cut(s) 723, 759, 1030, 1315
PspGI CCWGG 4 cut(s) 723, 759, 1030, 1315
PspXI VCTCGAGB 1 cut(s) 680
PstI CTGCAG 1 cut(s) 453
RsaI GTAC 3 cut(s) 191, 667, 1273
RsaNI GTAC 3 cut(s) 190, 666, 1272
RseI CAYNNNNRTG 1 cut(s) 219
SacI GAGCTC 3 cut(s) 293, 681, 687
SacII CCGCGG 1 cut(s) 283
SapI GCTCTTC 2 cut(s) 669, 692
SaqAI TTAA 2 cut(s) 1040, 1070
SatI GCNGC 4 cut(s) 280, 452, 929, 993
Sau3AI GATC 2 cut(s) 21, 727
ScaI AGTACT 1 cut(s) 1273
SchI GAGTC 2 cut(s) 998, 1059
ScrFI CCNGG 4 cut(s) 725, 761, 1032, 1317
SduI GDGCHC 4 cut(s) 293, 681, 687, 1316
SfaNI GCATC 3 cut(s) 336, 1096, 1177
SfcI CTRYAG 2 cut(s) 449, 1143
Sfr274I CTCGAG 1 cut(s) 680
Sfr303I CCGCGG 1 cut(s) 283
SgrBI CCGCGG 1 cut(s) 283
SlaI CTCGAG 1 cut(s) 680
SmiMI CAYNNNNRTG 1 cut(s) 219
SmlI CTYRAG 1 cut(s) 680
SmoI CTYRAG 1 cut(s) 680
Sse9I AATT 5 cut(s) 36, 143, 421, 786, 1118
SsiI CCGC 5 cut(s) 280, 282, 636, 929, 969
SspI AATATT 2 cut(s) 398, 590
SspMI CTAG 4 cut(s) 182, 434, 882, 932
SstI GAGCTC 3 cut(s) 293, 681, 687
StyD4I CCNGG 4 cut(s) 723, 759, 1030, 1315
StyI CCWWGG 3 cut(s) 350, 564, 1008
TaaI ACNGT 3 cut(s) 218, 768, 859
TaiI ACGT 1 cut(s) 11
TaqI TCGA 3 cut(s) 162, 681, 1356
TasI AATT 5 cut(s) 36, 143, 421, 786, 1118
TatI WGTACW 1 cut(s) 1271
TauI GCSGC 2 cut(s) 282, 931
TfiI GAWTC 5 cut(s) 152, 325, 842, 1035, 1301
Tru1I TTAA 2 cut(s) 1040, 1070
Tru9I TTAA 2 cut(s) 1040, 1070
TscAI CASTG 2 cut(s) 787, 1030
TseFI GTSAC 1 cut(s) 1339
TseI GCWGC 2 cut(s) 451, 992
Tsp45I GTSAC 1 cut(s) 1339
TspRI CASTG 2 cut(s) 787, 1030
XapI RAATTY 2 cut(s) 143, 421
XceI RCATGY 3 cut(s) 631, 928, 1103
XhoI CTCGAG 1 cut(s) 680
XmnI GAANNNNTTC 1 cut(s) 699
XspI CTAG 4 cut(s) 182, 434, 882, 932
ZrmI AGTACT 1 cut(s) 1273
Zsp2I ATGCAT 2 cut(s) 1192, 1375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.