FvH4_4g27950

synthase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
28740753 .. 28744361
3609 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g27950.t1

Sequence Viewer

Length: 1671 bp
ATGGCGCCTGCTCAATCTCAAATCGCAAATGCCGCTTCTGATGTTAAGCGTTGTTCGCCTCATTATACTCCTGGCATTGAGGCAGAGGCATATTCTGCTGCTGCTCATCTGGAAGCCGACGCTGTACAGGAGCAACACTTCCAAGAGCTGAAGGAACAAGTGAGAAGAATGCTGATGGCGGCAGTTTACCAGCCTTCGAACATATTAGACATGATTGATAACATTCAACGCTTAGGCTTGTCCAACAATTTTGAAAATGAGATCAATGCAATATTGAAACTGGTTCATAATGGTTATGGTACAGAAGATCTAGAAAATGATGGTGACCTATACACTATTGCTCTCCGTTTTCGGTTGCTTAGGCAACAAGGCTATAATGTTTCATGCGATGTGTTCAACAGGTTCAAGCAAAGTAACGGAACATTTAAGGAATCTCTTACGAGCGATGTAGTAGGACTATTAAGCTTGTATGAAGCCACTCACCTTAGGGTTCACGGAGAAGACATTCTTGAAGAGGCACTGACCTTCACCACGAGCCATCTCAAATCTGCAGCACCCCGGTTGAGCTCCATTTTGTCGAAACAAGTAACTCATGCCTTGTATCAGCCACTTTGGAAGGGCTTTTCAAGGCTAGAAGCTAGGCATTACATGTCTGTCTATGAGGAAGATGGTTCATACAACCAAACTCTGCTAACTCTGGCAAAGTTGAATTTCAACTTAGTACAGAAAGTCCATCAGAAAGAACTGAGTGATATGACAAGGTGGTGGAAGGACTTAGACTTTGTAAACAAGCTACCTTTTGCAAGAGACCGGTTAGTTGAGGCCTACTTCTGGGGTTTGGCGACATGCTATGAACCTGAATATTACTTTGCTAGAATTATGGCGTGCAAATATGGTGCTCTAACGACAGTCCTTGACGACGTTTACGATGCCTACGGCACATACGAAGAACTAGAGCGCTTTACAGAAGCTATTGAGAGGTGGGACATTTTTGTTGTTGATCAACTGCAATTGCCCCAGTGTATGGAGGTTTGCTATAAGGGATTGTTGGATAGCTACTCAGGATATGAAGAAAAGCTTGCAGATGAAGGAAACTTGTATCGCATTGAGTTTGCTAAAGAAGCAATCAAAATTCAACTCAGGGGTTACTTCCAGGAGGCCAAATGGTTGAAGGAAAAATACACACCAACAATGGATGAATATATTCCCAATGCACTTGATACGTCCTTCTATCCGATGGCAATCACAACCTCCGTTGGAATGGGAGGTCTTGTTATAAAAGACACCATGGATTGGGTGTTAAATCACCCTAAGATTGTTAAAGCTACAACGCTAATTGGCAGACTCCTCAACGACATGGCTGGCCACAAGTTTGAGCAAACCAACGAGCAGTGTGCCTCATCAGTAGAATGCTACATGAACCATTATGGTGTCGGAGAAGAAGAAGCGAAAATCGCGCTAACTAAGCAAAAGGATGCTGCATGGAAAGACCTAAACCAAGAGTTGCTCGATCTCCACTCCAGCAATAGTATCCCCAAGCCCCTCCTGCAGATCATTTTGAATCTTGCACGTTCTAGTGAAGTTATTTACAAAAATATGGAAGGGTTTAACAACTCATCTGCGCTCAAGGGTTTCATAGATTCTCTCCTTATAGAACCAGTGCATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

557

Amino Acids

63.57

Weight (kDa)

5.15

Isoelectric Point (pI)

44.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 39 - 200 4.9e-57 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 257 - 497 7.6e-85 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 297 - 497 4.3e-50 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1277
AccB1I GGYRCC 1 cut(s) 4
AccB7I CCANNNNNTGG 2 cut(s) 1024, 1293
AccII CGCG 1 cut(s) 1457
AciI CCGC 2 cut(s) 33, 179
AcoI YGGCCR 1 cut(s) 1363
AcsI RAATTY 2 cut(s) 709, 1131
AcuI CTGAAG 1 cut(s) 170
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 3 cut(s) 126, 301, 723
AfeI AGCGCT 1 cut(s) 959
AfiI CCNNNNNNNGG 3 cut(s) 831, 1024, 1293
AflIII ACRYGT 1 cut(s) 648
AgeI ACCGGT 1 cut(s) 810
AjnI CCWGG 2 cut(s) 70, 1152
AluBI AGCT 9 cut(s) 148, 465, 567, 638, 793, 971, 1056, 1078, 1325
AluI AGCT 9 cut(s) 148, 465, 567, 638, 793, 971, 1056, 1078, 1325
Alw21I GWGCWC 2 cut(s) 569, 901
Alw26I GTCTC 1 cut(s) 801
Aor51HI AGCGCT 1 cut(s) 959
AoxI GGCC 3 cut(s) 822, 1158, 1363
ApeKI GCWGC 4 cut(s) 98, 101, 551, 1478
ApoI RAATTY 2 cut(s) 709, 1131
ArsI GACNNNNNNTTYG 2 cut(s) 764, 796
AsiGI ACCGGT 1 cut(s) 810
Asp700I GAANNNNTTC 2 cut(s) 504, 1203
AspLEI GCGC 4 cut(s) 7, 960, 1459, 1624
AsuC2I CCSGG 1 cut(s) 559
AsuHPI GGTGA 4 cut(s) 335, 473, 520, 1298
AsuII TTCGAA 1 cut(s) 197
AxyI CCTNAGG 1 cut(s) 485
BalI TGGCCA 1 cut(s) 1365
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 569
BarI GAAGNNNNNNTAC 2 cut(s) 1163, 1195
BauI CACGAG 1 cut(s) 532
BbsI GAAGAC 1 cut(s) 507
Bbv12I GWGCWC 2 cut(s) 569, 901
BbvI GCAGC 4 cut(s) 85, 88, 563, 1465
BccI CCATC 6 cut(s) 169, 314, 546, 662, 741, 1231
BceAI ACGGC 1 cut(s) 952
BcgI CGANNNNNNTGC 2 cut(s) 1376, 1410
BciT130I CCWGG 2 cut(s) 72, 1154
BciVI GTATCC 1 cut(s) 1541
BclI TGATCA 1 cut(s) 1000
BcnI CCSGG 1 cut(s) 559
BcoDI GTCTC 1 cut(s) 801
BfaI CTAG 6 cut(s) 311, 632, 639, 873, 953, 1575
BfmI CTRYAG 2 cut(s) 549, 1547
BfoI RGCGCY 2 cut(s) 8, 961
BfuI GTATCC 1 cut(s) 1541
BglII AGATCT 1 cut(s) 307
BisI GCNGC 6 cut(s) 33, 99, 102, 180, 552, 1479
BlsI GCNGC 6 cut(s) 34, 100, 103, 181, 553, 1480
Bme1390I CCNGG 3 cut(s) 72, 559, 1154
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 3 cut(s) 72, 559, 1154
BmrI ACTGGG 1 cut(s) 1012
BmsI GCATC 2 cut(s) 919, 1465
BmuI ACTGGG 1 cut(s) 1012
BpiI GAAGAC 1 cut(s) 507
BpmI CTGGAG 1 cut(s) 1504
Bpu10I CCTNAGC 2 cut(s) 232, 359
Bpu14I TTCGAA 1 cut(s) 197
BpuEI CTTGAG 1 cut(s) 1610
BpuMI CCSGG 1 cut(s) 559
BsaBI GATNNNNATC 1 cut(s) 1241
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 801
BsaJI CCNNGG 2 cut(s) 557, 1287
BsaWI WCCGGW 1 cut(s) 810
BsaXI ACNNNNNCTCC 2 cut(s) 1257, 1287
Bsc4I CCNNNNNNNGG 3 cut(s) 831, 1024, 1293
Bse118I RCCGGY 1 cut(s) 810
Bse1I ACTGG 3 cut(s) 285, 1018, 1658
Bse21I CCTNAGG 1 cut(s) 485
Bse8I GATNNNNATC 1 cut(s) 1241
BseBI CCWGG 2 cut(s) 72, 1154
BseDI CCNNGG 2 cut(s) 557, 1287
BseGI GGATG 2 cut(s) 1201, 1480
BseJI GATNNNNATC 1 cut(s) 1241
BseLI CCNNNNNNNGG 3 cut(s) 831, 1024, 1293
BseMII CTCAG 3 cut(s) 737, 1074, 1153
BseNI ACTGG 3 cut(s) 285, 1018, 1658
BseRI GAGGAG 1 cut(s) 1337
BseXI GCAGC 4 cut(s) 85, 88, 563, 1465
Bsh1236I CGCG 1 cut(s) 1457
BshFI GGCC 3 cut(s) 824, 1160, 1365
BshNI GGYRCC 1 cut(s) 4
BshTI ACCGGT 1 cut(s) 810
BsiHKAI GWGCWC 2 cut(s) 569, 901
BsiSI CCGG 2 cut(s) 559, 811
BslFI GGGAC 1 cut(s) 998
BslI CCNNNNNNNGG 3 cut(s) 831, 1024, 1293
BsmAI GTCTC 1 cut(s) 801
BsmFI GGGAC 1 cut(s) 998
BsmI GAATGC 2 cut(s) 174, 1415
BsnI GGCC 3 cut(s) 824, 1160, 1365
Bso31I GGTCTC 1 cut(s) 801
Bsp119I TTCGAA 1 cut(s) 197
Bsp1286I GDGCHC 2 cut(s) 569, 901
Bsp1407I TGTACA 1 cut(s) 124
Bsp143I GATC 5 cut(s) 261, 307, 1000, 1510, 1551
Bsp19I CCATGG 1 cut(s) 1287
BspACI CCGC 2 cut(s) 33, 179
BspANI GGCC 3 cut(s) 824, 1160, 1365
BspCNI CTCAG 3 cut(s) 738, 1073, 1152
BspFNI CGCG 1 cut(s) 1457
BspLI GGNNCC 1 cut(s) 6
BspMAI CTGCAG 2 cut(s) 553, 1551
BspT104I TTCGAA 1 cut(s) 197
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 801
BsrFI RCCGGY 1 cut(s) 810
BsrGI TGTACA 1 cut(s) 124
BsrI ACTGG 3 cut(s) 285, 1018, 1658
BssAI RCCGGY 1 cut(s) 810
BssECI CCNNGG 2 cut(s) 557, 1287
BssMI GATC 5 cut(s) 261, 307, 1000, 1510, 1551
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 532
BssT1I CCWWGG 1 cut(s) 1287
Bst2BI CACGAG 1 cut(s) 532
Bst2UI CCWGG 2 cut(s) 72, 1154
Bst4CI ACNGT 1 cut(s) 910
Bst6I CTCTTC 1 cut(s) 507
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 95
BstAUI TGTACA 1 cut(s) 124
BstBI TTCGAA 1 cut(s) 197
BstC8I GCNNGC 4 cut(s) 9, 886, 1080, 1363
BstDSI CCRYGG 1 cut(s) 1287
BstEII GGTNACC 1 cut(s) 323
BstF5I GGATG 2 cut(s) 1201, 1480
BstFNI CGCG 1 cut(s) 1457
BstH2I RGCGCY 2 cut(s) 8, 961
BstHHI GCGC 4 cut(s) 7, 960, 1459, 1624
BstKTI GATC 5 cut(s) 264, 310, 1003, 1513, 1554
BstMAI GTCTC 1 cut(s) 801
BstMBI GATC 5 cut(s) 261, 307, 1000, 1510, 1551
BstMWI GCNNNNNNNGC 7 cut(s) 32, 55, 95, 1121, 1454, 1465, 1546
BstNI CCWGG 2 cut(s) 72, 1154
BstNSI RCATGY 3 cut(s) 652, 849, 1667
BstPI GGTNACC 1 cut(s) 323
BstSCI CCNGG 3 cut(s) 70, 557, 1152
BstSFI CTRYAG 2 cut(s) 549, 1547
BstUI CGCG 1 cut(s) 1457
BstV1I GCAGC 4 cut(s) 85, 88, 563, 1465
BstV2I GAAGAC 1 cut(s) 507
BstX2I RGATCY 1 cut(s) 307
BstYI RGATCY 1 cut(s) 307
Bsu36I CCTNAGG 1 cut(s) 485
BsuI GTATCC 1 cut(s) 1541
BsuRI GGCC 3 cut(s) 824, 1160, 1365
BtgI CCRYGG 1 cut(s) 1287
BtgZI GCGATG 2 cut(s) 402, 459
BtsCI GGATG 2 cut(s) 1201, 1480
BtsI GCAGTG 1 cut(s) 1397
BtsIMutI CAGTG 4 cut(s) 518, 1025, 1397, 1665
Cac8I GCNNGC 4 cut(s) 9, 886, 1080, 1363
CfoI GCGC 4 cut(s) 7, 960, 1459, 1624
Cfr10I RCCGGY 1 cut(s) 810
CseI GACGC 1 cut(s) 128
Csp6I GTAC 3 cut(s) 125, 300, 722
CspAI ACCGGT 1 cut(s) 810
CviQI GTAC 3 cut(s) 125, 300, 722
DinI GGCGCC 1 cut(s) 6
DpnI GATC 5 cut(s) 263, 309, 1002, 1512, 1553
DpnII GATC 5 cut(s) 261, 307, 1000, 1510, 1551
EaeI YGGCCR 1 cut(s) 1363
Eam1104I CTCTTC 1 cut(s) 507
EarI CTCTTC 1 cut(s) 507
Ecl136II GAGCTC 1 cut(s) 567
Eco130I CCWWGG 1 cut(s) 1287
Eco147I AGGCCT 1 cut(s) 824
Eco24I GRGCYC 1 cut(s) 569
Eco31I GGTCTC 1 cut(s) 801
Eco47III AGCGCT 1 cut(s) 959
Eco53kI GAGCTC 1 cut(s) 567
Eco57I CTGAAG 1 cut(s) 170
Eco81I CCTNAGG 1 cut(s) 485
Eco91I GGTNACC 1 cut(s) 323
EcoICRI GAGCTC 1 cut(s) 567
EcoO65I GGTNACC 1 cut(s) 323
EcoRII CCWGG 2 cut(s) 70, 1152
EcoT14I CCWWGG 1 cut(s) 1287
EcoT38I GRGCYC 1 cut(s) 569
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 1287
FalI AAGNNNNNCTT 4 cut(s) 492, 524, 1062, 1094
FaqI GGGAC 1 cut(s) 998
FbaI TGATCA 1 cut(s) 1000
Fnu4HI GCNGC 6 cut(s) 33, 99, 102, 180, 552, 1479
FokI GGATG 2 cut(s) 1208, 1487
FriOI GRGCYC 1 cut(s) 569
Fsp4HI GCNGC 6 cut(s) 33, 99, 102, 180, 552, 1479
FspBI CTAG 6 cut(s) 311, 632, 639, 873, 953, 1575
GlaI GCGC 4 cut(s) 6, 959, 1458, 1623
GluI GCNGC 6 cut(s) 33, 99, 102, 180, 552, 1479
GsuI CTGGAG 1 cut(s) 1504
HaeII RGCGCY 2 cut(s) 8, 961
HaeIII GGCC 3 cut(s) 824, 1160, 1365
HapII CCGG 2 cut(s) 559, 811
HgaI GACGC 1 cut(s) 128
HhaI GCGC 4 cut(s) 7, 960, 1459, 1624
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 4 cut(s) 5, 958, 1457, 1622
HinP1I GCGC 4 cut(s) 5, 958, 1457, 1622
HindIII AAGCTT 2 cut(s) 463, 1076
HinfI GANTC 4 cut(s) 431, 1344, 1561, 1640
HpaII CCGG 2 cut(s) 559, 811
HphI GGTGA 4 cut(s) 335, 473, 520, 1298
Hpy166II GTNNAC 4 cut(s) 187, 493, 787, 925
Hpy188I TCNGA 4 cut(s) 40, 738, 1236, 1436
Hpy188III TCNNGA 4 cut(s) 110, 311, 509, 1062
Hpy8I GTNNAC 4 cut(s) 187, 493, 787, 925
Hpy99I CGWCG 2 cut(s) 122, 923
HpyAV CCTTC 9 cut(s) 145, 204, 535, 610, 763, 1082, 1165, 1237, 1595
HpyCH4III ACNGT 1 cut(s) 910
HpyCH4IV ACGT 3 cut(s) 921, 1223, 1570
HpyF10VI GCNNNNNNNGC 7 cut(s) 32, 55, 95, 1121, 1454, 1465, 1546
HpySE526I ACGT 3 cut(s) 921, 1223, 1570
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 4 cut(s) 5, 958, 1457, 1622
KasI GGCGCC 1 cut(s) 4
Ksp22I TGATCA 1 cut(s) 1000
Kzo9I GATC 5 cut(s) 261, 307, 1000, 1510, 1551
LmnI GCTCC 2 cut(s) 130, 572
Lsp1109I GCAGC 4 cut(s) 85, 88, 563, 1465
LweI GCATC 2 cut(s) 919, 1465
MaeI CTAG 6 cut(s) 311, 632, 639, 873, 953, 1575
MaeII ACGT 3 cut(s) 921, 1223, 1570
MaeIII GTNAC 4 cut(s) 323, 413, 586, 1145
MalI GATC 5 cut(s) 263, 309, 1002, 1512, 1553
MboI GATC 5 cut(s) 261, 307, 1000, 1510, 1551
MboII GAAGA 9 cut(s) 177, 317, 512, 524, 677, 959, 1082, 1451, 1454
MfeI CAATTG 1 cut(s) 1010
MflI RGATCY 1 cut(s) 307
MhlI GDGCHC 2 cut(s) 569, 901
MlsI TGGCCA 1 cut(s) 1365
MluCI AATT 6 cut(s) 247, 709, 876, 1010, 1131, 1335
MluNI TGGCCA 1 cut(s) 1365
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 1338
MmeI TCCRAC 4 cut(s) 267, 1029, 1237, 1414
Mox20I TGGCCA 1 cut(s) 1365
MroXI GAANNNNTTC 2 cut(s) 504, 1203
MscI TGGCCA 1 cut(s) 1365
MseI TTAA 7 cut(s) 45, 426, 461, 1301, 1320, 1608, 1669
MslI CAYNNNNRTG 1 cut(s) 1428
Msp20I TGGCCA 1 cut(s) 1365
MspI CCGG 2 cut(s) 559, 811
MspR9I CCNGG 3 cut(s) 72, 559, 1154
MunI CAATTG 1 cut(s) 1010
Mva1269I GAATGC 2 cut(s) 174, 1415
MvaI CCWGG 2 cut(s) 72, 1154
MvnI CGCG 1 cut(s) 1457
MwoI GCNNNNNNNGC 7 cut(s) 32, 55, 95, 1121, 1454, 1465, 1546
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 1 cut(s) 559
NcoI CCATGG 1 cut(s) 1287
NdeII GATC 5 cut(s) 261, 307, 1000, 1510, 1551
NlaIV GGNNCC 1 cut(s) 6
NmuCI GTSAC 1 cut(s) 323
NspI RCATGY 3 cut(s) 652, 849, 1667
NspV TTCGAA 1 cut(s) 197
PceI AGGCCT 1 cut(s) 824
PciI ACATGT 1 cut(s) 648
PcsI WCGNNNNNNNCGW 2 cut(s) 924, 942
PctI GAATGC 2 cut(s) 174, 1415
PdmI GAANNNNTTC 2 cut(s) 504, 1203
PfeI GAWTC 3 cut(s) 431, 1561, 1640
PflMI CCANNNNNTGG 2 cut(s) 1024, 1293
PfoI TCCNGGA 1 cut(s) 1152
PinAI ACCGGT 1 cut(s) 810
PkrI GCNGC 6 cut(s) 34, 100, 103, 181, 553, 1480
PleI GAGTC 1 cut(s) 1338
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 1338
PscI ACATGT 1 cut(s) 648
PsiI TTATAA 1 cut(s) 1277
Psp124BI GAGCTC 1 cut(s) 569
Psp6I CCWGG 2 cut(s) 70, 1152
PspEI GGTNACC 1 cut(s) 323
PspGI CCWGG 2 cut(s) 70, 1152
PspN4I GGNNCC 1 cut(s) 6
PstI CTGCAG 2 cut(s) 553, 1551
PsuI RGATCY 1 cut(s) 307
RsaI GTAC 3 cut(s) 126, 301, 723
RsaNI GTAC 3 cut(s) 125, 300, 722
RseI CAYNNNNRTG 1 cut(s) 1428
SacI GAGCTC 1 cut(s) 569
SaqAI TTAA 7 cut(s) 45, 426, 461, 1301, 1320, 1608, 1669
SatI GCNGC 6 cut(s) 33, 99, 102, 180, 552, 1479
Sau3AI GATC 5 cut(s) 261, 307, 1000, 1510, 1551
SchI GAGTC 1 cut(s) 1338
ScrFI CCNGG 3 cut(s) 72, 559, 1154
SduI GDGCHC 2 cut(s) 569, 901
SfaNI GCATC 2 cut(s) 919, 1465
SfcI CTRYAG 2 cut(s) 549, 1547
SfoI GGCGCC 1 cut(s) 6
SfuI TTCGAA 1 cut(s) 197
SmiMI CAYNNNNRTG 1 cut(s) 1428
SmlI CTYRAG 1 cut(s) 1625
SmoI CTYRAG 1 cut(s) 1625
Sse9I AATT 6 cut(s) 247, 709, 876, 1010, 1131, 1335
SseBI AGGCCT 1 cut(s) 824
SsiI CCGC 2 cut(s) 33, 179
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 2 cut(s) 273, 863
SspMI CTAG 6 cut(s) 311, 632, 639, 873, 953, 1575
SstI GAGCTC 1 cut(s) 569
StuI AGGCCT 1 cut(s) 824
StyD4I CCNGG 3 cut(s) 70, 557, 1152
StyI CCWWGG 1 cut(s) 1287
TaaI ACNGT 1 cut(s) 910
TaiI ACGT 3 cut(s) 924, 1226, 1573
TaqI TCGA 3 cut(s) 197, 578, 1509
TasI AATT 6 cut(s) 247, 709, 876, 1010, 1131, 1335
TatI WGTACW 2 cut(s) 124, 721
TauI GCSGC 2 cut(s) 35, 182
TfiI GAWTC 3 cut(s) 431, 1561, 1640
Tru1I TTAA 7 cut(s) 45, 426, 461, 1301, 1320, 1608, 1669
Tru9I TTAA 7 cut(s) 45, 426, 461, 1301, 1320, 1608, 1669
TscAI CASTG 4 cut(s) 525, 1025, 1397, 1665
TseFI GTSAC 1 cut(s) 323
TseI GCWGC 4 cut(s) 98, 101, 551, 1478
Tsp45I GTSAC 1 cut(s) 323
TspGWI ACGGA 4 cut(s) 335, 432, 510, 1243
TspRI CASTG 4 cut(s) 525, 1025, 1397, 1665
Van91I CCANNNNNTGG 2 cut(s) 1024, 1293
XapI RAATTY 2 cut(s) 709, 1131
XbaI TCTAGA 1 cut(s) 310
XceI RCATGY 3 cut(s) 652, 849, 1667
XmnI GAANNNNTTC 2 cut(s) 504, 1203
XspI CTAG 6 cut(s) 311, 632, 639, 873, 953, 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.