Prupe.4G199500_v2.0.a1

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Reverse (-)
12346365 .. 12348862
2498 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G199500.1

Sequence Viewer

Length: 1698 bp
ATGGCTCTAGAAGCTGGTTCAACAGCTCAATCACAAAATTCTAAGGCTGATCAAATTGTTCGACAGACAGCAAATTACCACCCGAGCATTTGGGGGGATCAGTTTATGAATTATGATTCAGAAGACATTATAACTGATGCCCATAAGCAACAAGAAGTTGAAGAACTGAAACTAGCAGTGAGGAGGGAAGTGTTCACAACCAGTGCAGATGATTTTTCAAATAAGATGAAGCTAATTGATGCAATCCAGCGCCTAGGTGTGGCGTACCACTTTGAAAAGGAAATAGAAGAAGCACTGCAACATATATATGCTGCAAATCATTTCCATGATGATGATGATGGTGATGGTGATCTATACAATGTTTCTCTTGGTTTTCGGCTACTAAGACAACATGGACACAATGTTTCATGCACAGGAATATTCAACAAGTTCAAAGATATTAAAAGTGGAGGTTTCAAGGAAAGCTTAATTGCTGATGTGTCGGGCATGCTAAGCTTTTATGAAGCAACTCATCTGAGGGTGCATGGAGAAGATATACTAGAAGAAGCTCTTGTTTTCACCACCAAACATCTCGAGTCGGCAACAACCCATGTAAGCTATCAACTGGCAGAACAAATACTTCAAGCCTTAGAGAGACCGTTGCGAAAGGGTCTCGAGAGGTTATGTGCCCATCGGTACATGTCAACCTACCAGGATGAAGGTTCACATAATGAAGCTCTATTAAAACTTGCCAAGTTAGACTTCAATCTTGTTCAGTCTTTGCACAAACAAGAGCTCAGTGAGATTATTAGGTGGTGGAAACAACTAGACTTTGGAAGGAAGCTGCCTTTTGCAAGAAACAGAATTGTGGAGTTATACTGCTGGATTTTGGGGGTCTATTTTGAGCCCCAATACCTTGTTGGAAGAAAATTTCTCACAAAAATTATTGCCCTGATGTCGGTAATGGATGATATCTATGACGCATTCGGTACATTTGAAGAACTTGAGATCTTTACCGAAGCAATTCATCAAAGATGGCATGCCAATTGCATGGATGGACTGCCAGATTACATGCAAATATTCTTCCATGCGCTTTTGGATGTTTTCAATGAAATTGAAGAGGAGATGGTGAAGGAAGGAAGAGCATACCGAGCTCACTATGCAAAAGAAGCTTGGAAAGCTACTGCCAAAGCTTACTTTGATGAGGCCAAATGGTTCCATGAAGGATGCATCCCAAGCATGGAGGGGTATATGCGTGTTGCTGCAACTTCTAGTGGTATCTTCGGAGTTTCAACTACATCTTTAGTTGGCATGGGAGATATTGTAACCAAGGAGTCCTTTGAGTGGTTGTTCAATGACCCTAAAATTCTTAGAGCTTCCAATATCATTGTTAGGCTCATGGATGACATCGTTTCGAGCAAGTTTGAAAAAGGGAGGGGCCATGTTGCTTGTGCTATTGATTGTTACATGAAGCAATATGGGGTCTCAGATAAGCAAGAGATAATTGATGTCTTCAACAAACAAATTGTGGATTCGTGGAAAGATATCAACGAGGAGTTCCTTAGACCAACTTCTATGCCGATGCCTATCCTTGAACGTATTGTTAATTTAACAAGAGTGGTGGATCTCCTCTACAAAAAATATGATGCCTACACACATGGTGGAAAAGTGATGAACGATTGCATCGCTTTGTATTTGATTGATCCGGCACCAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

566

Amino Acids

65.05

Weight (kDa)

5.38

Isoelectric Point (pI)

49.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 131
AccB1I GGYRCC 1 cut(s) 1687
AclWI GGATC 3 cut(s) 105, 1611, 1676
AcsI RAATTY 3 cut(s) 37, 908, 1344
AdeI CACNNNGTG 1 cut(s) 1640
AfaI GTAC 3 cut(s) 266, 677, 970
AfiI CCNNNNNNNGG 4 cut(s) 259, 937, 1219, 1323
AflIII ACRYGT 1 cut(s) 678
AjnI CCWGG 1 cut(s) 690
AjuI GAANNNNNNNTTGG 2 cut(s) 725, 757
Alw21I GWGCWC 2 cut(s) 777, 1135
Alw26I GTCTC 3 cut(s) 628, 656, 1468
AlwI GGATC 3 cut(s) 105, 1611, 1676
Ama87I CYCGRG 3 cut(s) 82, 572, 653
AoxI GGCC 2 cut(s) 1185, 1417
ApeKI GCWGC 3 cut(s) 311, 823, 1241
ApoI RAATTY 3 cut(s) 37, 908, 1344
Asp700I GAANNNNTTC 1 cut(s) 1002
AspA2I CCTAGG 1 cut(s) 253
AspLEI GCGC 2 cut(s) 252, 1072
AspS9I GGNCC 1 cut(s) 1417
AsuHPI GGTGA 4 cut(s) 353, 359, 550, 1120
AvaI CYCGRG 3 cut(s) 82, 572, 653
AvrII CCTAGG 1 cut(s) 253
BaeGI GKGCMC 1 cut(s) 670
BanI GGYRCC 1 cut(s) 1687
BanII GRGCYC 3 cut(s) 777, 888, 1135
BbsI GAAGAC 2 cut(s) 129, 1483
Bbv12I GWGCWC 2 cut(s) 777, 1135
BbvI GCAGC 3 cut(s) 298, 810, 1228
BccI CCATC 6 cut(s) 332, 338, 678, 1008, 1028, 1099
BciT130I CCWGG 1 cut(s) 692
BclI TGATCA 1 cut(s) 49
BcoDI GTCTC 3 cut(s) 628, 656, 1468
BfaI CTAG 6 cut(s) 8, 173, 254, 539, 806, 1251
BfoI RGCGCY 1 cut(s) 253
BglII AGATCT 1 cut(s) 987
BisI GCNGC 3 cut(s) 312, 824, 1242
BlnI CCTAGG 1 cut(s) 253
BlpI GCTNAGC 1 cut(s) 491
BlsI GCNGC 3 cut(s) 313, 825, 1243
Bme1390I CCNGG 1 cut(s) 692
BmeT110I CYCGRG 3 cut(s) 82, 572, 653
BmgT120I GGNCC 1 cut(s) 1417
BmiI GGNNCC 3 cut(s) 1196, 1418, 1689
BmrFI CCNGG 1 cut(s) 692
BmsI GCATC 7 cut(s) 127, 229, 1196, 1218, 1551, 1615, 1671
BpiI GAAGAC 2 cut(s) 129, 1483
Bpu1102I GCTNAGC 1 cut(s) 491
BpuEI CTTGAG 1 cut(s) 1004
BsaBI GATNNNNATC 2 cut(s) 348, 1565
BsaI GGTCTC 3 cut(s) 628, 656, 1468
BsaJI CCNNGG 2 cut(s) 253, 1308
BsaXI ACNNNNNCTCC 2 cut(s) 1287, 1317
Bsc4I CCNNNNNNNGG 4 cut(s) 259, 937, 1219, 1323
Bse1I ACTGG 3 cut(s) 201, 609, 1691
Bse8I GATNNNNATC 2 cut(s) 348, 1565
BseBI CCWGG 1 cut(s) 692
BseDI CCNNGG 2 cut(s) 253, 1308
BseGI GGATG 7 cut(s) 700, 952, 1039, 1084, 1209, 1211, 1387
BseJI GATNNNNATC 2 cut(s) 348, 1565
BseLI CCNNNNNNNGG 4 cut(s) 259, 937, 1219, 1323
BseMII CTCAG 3 cut(s) 506, 790, 1479
BseNI ACTGG 3 cut(s) 201, 609, 1691
BseRI GAGGAG 4 cut(s) 196, 1115, 1547, 1598
BseSI GKGCMC 1 cut(s) 670
BseXI GCAGC 3 cut(s) 298, 810, 1228
BsgI GTGCAG 1 cut(s) 225
BshFI GGCC 2 cut(s) 1187, 1419
BshNI GGYRCC 1 cut(s) 1687
BsiHKAI GWGCWC 2 cut(s) 777, 1135
BsiHKCI CYCGRG 3 cut(s) 82, 572, 653
BsiSI CCGG 1 cut(s) 1685
BslI CCNNNNNNNGG 4 cut(s) 259, 937, 1219, 1323
BsmAI GTCTC 3 cut(s) 628, 656, 1468
BsmI GAATGC 1 cut(s) 962
BsnI GGCC 2 cut(s) 1187, 1419
Bso31I GGTCTC 3 cut(s) 628, 656, 1468
BsoBI CYCGRG 3 cut(s) 82, 572, 653
Bsp1286I GDGCHC 4 cut(s) 670, 777, 888, 1135
Bsp143I GATC 6 cut(s) 49, 97, 349, 987, 1603, 1681
Bsp1720I GCTNAGC 1 cut(s) 491
BspANI GGCC 2 cut(s) 1187, 1419
BspCNI CTCAG 3 cut(s) 507, 789, 1478
BspLI GGNNCC 3 cut(s) 1196, 1418, 1689
BspPI GGATC 3 cut(s) 105, 1611, 1676
BspQI GCTCTTC 1 cut(s) 1114
BspT107I GGYRCC 1 cut(s) 1687
BspTNI GGTCTC 3 cut(s) 628, 656, 1468
BsrI ACTGG 3 cut(s) 201, 609, 1691
BssECI CCNNGG 2 cut(s) 253, 1308
BssMI GATC 6 cut(s) 49, 97, 349, 987, 1603, 1681
BssT1I CCWWGG 2 cut(s) 253, 1308
Bst2UI CCWGG 1 cut(s) 692
Bst4CI ACNGT 1 cut(s) 639
Bst6I CTCTTC 2 cut(s) 1092, 1114
BstC8I GCNNGC 2 cut(s) 488, 1020
BstDEI CTNAG 9 cut(s) 42, 383, 491, 515, 628, 776, 1349, 1465, 1541
BstF5I GGATG 7 cut(s) 700, 952, 1039, 1084, 1209, 1211, 1387
BstH2I RGCGCY 1 cut(s) 253
BstHHI GCGC 2 cut(s) 252, 1072
BstKTI GATC 6 cut(s) 52, 100, 352, 990, 1606, 1684
BstMAI GTCTC 3 cut(s) 628, 656, 1468
BstMBI GATC 6 cut(s) 49, 97, 349, 987, 1603, 1681
BstMWI GCNNNNNNNGC 7 cut(s) 11, 492, 1130, 1139, 1148, 1157, 1215
BstNI CCWGG 1 cut(s) 692
BstNSI RCATGY 4 cut(s) 490, 682, 1022, 1054
BstSCI CCNGG 1 cut(s) 690
BstSLI GKGCMC 1 cut(s) 670
BstV1I GCAGC 3 cut(s) 298, 810, 1228
BstV2I GAAGAC 2 cut(s) 129, 1483
BstX2I RGATCY 2 cut(s) 987, 1603
BstXI CCANNNNNNTGG 1 cut(s) 1030
BstYI RGATCY 2 cut(s) 987, 1603
BsuRI GGCC 2 cut(s) 1187, 1419
BtgZI GCGATG 1 cut(s) 1648
BtsCI GGATG 7 cut(s) 700, 952, 1039, 1084, 1209, 1211, 1387
BtsI GCAGTG 2 cut(s) 183, 293
BtsIMutI CAGTG 4 cut(s) 183, 208, 293, 784
Cac8I GCNNGC 2 cut(s) 488, 1020
CfoI GCGC 2 cut(s) 252, 1072
Cfr13I GGNCC 1 cut(s) 1417
CseI GACGC 1 cut(s) 968
Csp6I GTAC 3 cut(s) 265, 676, 969
CspCI CAANNNNNGTGG 2 cut(s) 1581, 1616
CviQI GTAC 3 cut(s) 265, 676, 969
DdeI CTNAG 9 cut(s) 42, 383, 491, 515, 628, 776, 1349, 1465, 1541
DpnI GATC 6 cut(s) 51, 99, 351, 989, 1605, 1683
DpnII GATC 6 cut(s) 49, 97, 349, 987, 1603, 1681
DraIII CACNNNGTG 1 cut(s) 1640
Eam1104I CTCTTC 2 cut(s) 1092, 1114
EarI CTCTTC 2 cut(s) 1092, 1114
Ecl136II GAGCTC 2 cut(s) 775, 1133
Eco130I CCWWGG 2 cut(s) 253, 1308
Eco24I GRGCYC 3 cut(s) 777, 888, 1135
Eco31I GGTCTC 3 cut(s) 628, 656, 1468
Eco32I GATATC 2 cut(s) 952, 1525
Eco53kI GAGCTC 2 cut(s) 775, 1133
Eco88I CYCGRG 3 cut(s) 82, 572, 653
EcoICRI GAGCTC 2 cut(s) 775, 1133
EcoRII CCWGG 1 cut(s) 690
EcoRV GATATC 2 cut(s) 952, 1525
EcoT14I CCWWGG 2 cut(s) 253, 1308
EcoT22I ATGCAT 1 cut(s) 1211
EcoT38I GRGCYC 3 cut(s) 777, 888, 1135
ErhI CCWWGG 2 cut(s) 253, 1308
FalI AAGNNNNNCTT 8 cut(s) 449, 481, 534, 566, 725, 757, 1301, 1333
FbaI TGATCA 1 cut(s) 49
Fnu4HI GCNGC 3 cut(s) 312, 824, 1242
FokI GGATG 7 cut(s) 707, 959, 1046, 1091, 1196, 1218, 1394
FriOI GRGCYC 3 cut(s) 777, 888, 1135
Fsp4HI GCNGC 3 cut(s) 312, 824, 1242
FspBI CTAG 6 cut(s) 8, 173, 254, 539, 806, 1251
GlaI GCGC 2 cut(s) 251, 1071
GluI GCNGC 3 cut(s) 312, 824, 1242
HaeII RGCGCY 1 cut(s) 253
HaeIII GGCC 2 cut(s) 1187, 1419
HapII CCGG 1 cut(s) 1685
HgaI GACGC 1 cut(s) 968
HhaI GCGC 2 cut(s) 252, 1072
Hin6I GCGC 2 cut(s) 250, 1070
HinP1I GCGC 2 cut(s) 250, 1070
HincII GTYRAC 1 cut(s) 684
HindII GTYRAC 1 cut(s) 684
HindIII AAGCTT 4 cut(s) 463, 493, 1149, 1170
HinfI GANTC 4 cut(s) 116, 575, 1313, 1511
HpaII CCGG 1 cut(s) 1685
HphI GGTGA 4 cut(s) 353, 359, 550, 1120
Hpy166II GTNNAC 3 cut(s) 195, 684, 704
Hpy188I TCNGA 4 cut(s) 121, 516, 1265, 1468
Hpy188III TCNNGA 4 cut(s) 8, 572, 653, 655
Hpy8I GTNNAC 3 cut(s) 195, 684, 704
HpyAV CCTTC 5 cut(s) 692, 810, 1105, 1109, 1196
HpyCH4III ACNGT 1 cut(s) 639
HpyCH4IV ACGT 1 cut(s) 1576
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 492, 1130, 1139, 1148, 1157, 1215
HpyF3I CTNAG 9 cut(s) 42, 383, 491, 515, 628, 776, 1349, 1465, 1541
HpySE526I ACGT 1 cut(s) 1576
HspAI GCGC 2 cut(s) 250, 1070
Ksp22I TGATCA 1 cut(s) 49
Kzo9I GATC 6 cut(s) 49, 97, 349, 987, 1603, 1681
LguI GCTCTTC 1 cut(s) 1114
LpnPI CCDG 9 cut(s) 214, 260, 399, 590, 677, 704, 847, 944, 1056
Lsp1109I GCAGC 3 cut(s) 298, 810, 1228
LweI GCATC 7 cut(s) 127, 229, 1196, 1218, 1551, 1615, 1671
MaeI CTAG 6 cut(s) 8, 173, 254, 539, 806, 1251
MaeII ACGT 1 cut(s) 1576
MaeIII GTNAC 2 cut(s) 1303, 1442
MalI GATC 6 cut(s) 51, 99, 351, 989, 1605, 1683
MboI GATC 6 cut(s) 49, 97, 349, 987, 1603, 1681
MfeI CAATTG 1 cut(s) 1024
MflI RGATCY 2 cut(s) 987, 1603
MhlI GDGCHC 4 cut(s) 670, 777, 888, 1135
MlyI GAGTC 2 cut(s) 584, 1322
MmeI TCCRAC 1 cut(s) 880
Mph1103I ATGCAT 1 cut(s) 1211
MroXI GAANNNNTTC 1 cut(s) 1002
MseI TTAA 5 cut(s) 441, 467, 722, 1584, 1589
MslI CAYNNNNRTG 4 cut(s) 306, 324, 330, 1693
MspI CCGG 1 cut(s) 1685
MspR9I CCNGG 1 cut(s) 692
MunI CAATTG 1 cut(s) 1024
Mva1269I GAATGC 1 cut(s) 962
MvaI CCWGG 1 cut(s) 692
MwoI GCNNNNNNNGC 7 cut(s) 11, 492, 1130, 1139, 1148, 1157, 1215
NdeII GATC 6 cut(s) 49, 97, 349, 987, 1603, 1681
NlaIV GGNNCC 3 cut(s) 1196, 1418, 1689
NsiI ATGCAT 1 cut(s) 1211
NspI RCATGY 4 cut(s) 490, 682, 1022, 1054
PaeI GCATGC 2 cut(s) 490, 1022
PaeR7I CTCGAG 2 cut(s) 572, 653
PciI ACATGT 1 cut(s) 678
PciSI GCTCTTC 1 cut(s) 1114
PctI GAATGC 1 cut(s) 962
PdmI GAANNNNTTC 1 cut(s) 1002
PfeI GAWTC 2 cut(s) 116, 1511
PkrI GCNGC 3 cut(s) 313, 825, 1243
PleI GAGTC 2 cut(s) 583, 1321
PpsI GAGTC 2 cut(s) 583, 1321
PscI ACATGT 1 cut(s) 678
PsiI TTATAA 1 cut(s) 131
Psp124BI GAGCTC 2 cut(s) 777, 1135
Psp6I CCWGG 1 cut(s) 690
PspGI CCWGG 1 cut(s) 690
PspN4I GGNNCC 3 cut(s) 1196, 1418, 1689
PspPI GGNCC 1 cut(s) 1417
PsuI RGATCY 2 cut(s) 987, 1603
RsaI GTAC 3 cut(s) 266, 677, 970
RsaNI GTAC 3 cut(s) 265, 676, 969
RseI CAYNNNNRTG 4 cut(s) 306, 324, 330, 1693
SacI GAGCTC 2 cut(s) 777, 1135
SapI GCTCTTC 1 cut(s) 1114
SaqAI TTAA 5 cut(s) 441, 467, 722, 1584, 1589
SatI GCNGC 3 cut(s) 312, 824, 1242
Sau3AI GATC 6 cut(s) 49, 97, 349, 987, 1603, 1681
Sau96I GGNCC 1 cut(s) 1417
SchI GAGTC 2 cut(s) 584, 1322
ScrFI CCNGG 1 cut(s) 692
SduI GDGCHC 4 cut(s) 670, 777, 888, 1135
SfaNI GCATC 7 cut(s) 127, 229, 1196, 1218, 1551, 1615, 1671
Sfr274I CTCGAG 2 cut(s) 572, 653
SlaI CTCGAG 2 cut(s) 572, 653
SmiMI CAYNNNNRTG 4 cut(s) 306, 324, 330, 1693
SmlI CTYRAG 3 cut(s) 572, 653, 983
SmoI CTYRAG 3 cut(s) 572, 653, 983
SphI GCATGC 2 cut(s) 490, 1022
SspI AATATT 2 cut(s) 420, 1059
SspMI CTAG 6 cut(s) 8, 173, 254, 539, 806, 1251
SstI GAGCTC 2 cut(s) 777, 1135
StyD4I CCNGG 1 cut(s) 690
StyI CCWWGG 2 cut(s) 253, 1308
TaaI ACNGT 1 cut(s) 639
TaiI ACGT 1 cut(s) 1579
TaqI TCGA 4 cut(s) 61, 573, 654, 1394
TfiI GAWTC 2 cut(s) 116, 1511
Tru1I TTAA 5 cut(s) 441, 467, 722, 1584, 1589
Tru9I TTAA 5 cut(s) 441, 467, 722, 1584, 1589
TscAI CASTG 4 cut(s) 183, 208, 300, 784
TseI GCWGC 3 cut(s) 311, 823, 1241
TspRI CASTG 4 cut(s) 183, 208, 300, 784
XapI RAATTY 3 cut(s) 37, 908, 1344
XbaI TCTAGA 1 cut(s) 7
XceI RCATGY 4 cut(s) 490, 682, 1022, 1054
XcmI CCANNNNNNNNNTGG 1 cut(s) 896
XhoI CTCGAG 2 cut(s) 572, 653
XmaJI CCTAGG 1 cut(s) 253
XmnI GAANNNNTTC 1 cut(s) 1002
XspI CTAG 6 cut(s) 8, 173, 254, 539, 806, 1251
Zsp2I ATGCAT 1 cut(s) 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.