Rorug05G0158900

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000053
Physical Location & Seq
Reverse (-)
14764662 .. 14769443
4782 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0158900.1

Sequence Viewer

Length: 1893 bp
ATGGATTTGTTAGCGAAGTTTACATTTTTTCTCGTGGTGTTGGCTGTTCTTGAACAACATGTTGGTGTTTATGGACGGTTTGTGGTGGAGACGGGTAGTATTAAAGTTCTGTATCCAATGACTCTGAGGGGTAAGCATGATGGTGCTATTGGAAACTTTGGTCTGCCGGACTATGGAGGCTCCTTAGTGGGTACTGTGGTGTATCCTGAGAAAGGGTCTACTGGGTGTGAAGCTTTTGAGGGTGACAAGCCTTTCAGGTCTCAGAAGTCTCGCCCCACTATTGTTGTTCTTGATCGTGGAGGTTGCTACTTTGCTTTGAAGGTGTGGAATGCTCAAGAGGCAGGAGCTACAGCCGTTTTAGTGGCTGACAATGTTGAAGAGCCTCTAATTACAATGGACTCCCCAGAGGAGAGCAATGATGCAGATGGTTACATAGAGAAGATTGGAATTCCATCAGCTTTGATAGAGAAATCATTTGGTGACAGCTTGAAGGATGCTGTGAAAAACAATGAAGATGTTGTGGTGAAACTTGACTGGAGAGAGTCAGTGCCCCATCCTGATCAAAGAGTTGAGTATGAGTTCTGGACAAACAGCAATGACGAATGCGGGGCTCGCTGTGATGAGCAAATGAGTTTCGTGAAAAATTTCAAGGGTCATGCTCAGATTCTTGAGAAAGGGGGTTACACCCTGTTTACTCCACACTATATAACTTGGTATTGCCCAAAGGCTTTTGTCCTTACCGCTCAATGCAAGTCTCAATGCATAAACCGGGGGAGATACTGTGCACCAGATCCGGAGAAAGATTTTGGAGAAGGATACCAAGGGAAGGATGTGGTATTTGAGAACTTGAGGCAGCTTTGTGTGCATAAAGTTGCCAAGGAGAGAAACCGGTCATGGGTCTGGTGGGATTATGTGACAGACTTCCATATCAGATGTTCCATGAAAGAAAAGCGTTACAGTAAAGAATGCGCTGAGGATGTCATGAAATCACTTGATTTGCCTATCGACAAGATTAAAAAATGCATGGGCAATCCTGAAGATGATGTGGAGAATGAAGTGCTTAAAGCTGAACAAGAAATCCAGGTTGGTCGAGGATCTCGTGGTGATGTTACCATCTTGCCAACATTGGTGATTAATAATGTTCAATATCGAGGAAAACTGGAACGAACTGGTGTCCTAAAGGCACTATGTGCTGGATTCAAGGAGACAACTGAACCTCAAATTTGTTTGAACGGAGATCTTGAAACAAATGAGTGTCTAGAGAGGAATGGTGGCTGTTGGCTGGACAACCGGAGTAATTTAACTGCTTGCAAGGACACTTTTAGGGGAAGAGTTTGTGAGTGCCCTGTAGTGGATGGTGTTCAATATAAAGGCGATGGTTATATATCTTGTGCTGCTTTTGGACCAGCAAGGTGTGCGATAGACAATGGAGGTTGCTGGTCAGAATCTAGAAATGGATTAACTATATCTGCTTGCTCAAATTCCGAGTTATCTGGCTGCAAGTGTCCACAAGGATTTATAGGGGATGGCCATCATTGCGAAGATATCGATGAATGCAAGGAACGTACTGCTTGTCAGTGTGATGGCTGCAGCTGTAAGAACACTTGGGGTGGATACAACTGCAAATGTAAGGGAGGACATCTTTATATAAAGGAGCAAGATACTTGTATTGAGAGACAAGGATCGAGATTTGCGTGGTTCATAACTTTCATGGTTCTTGCGGCTGTGGCTGGAGTTGGCTTGGCTGGTTACATATTCTACAAATACAGGCTTCGATCTTACATGGACTCGGAGATCATGGCTATTATGTCACAATACATGCCTCTAGATGGTCAACAGGCCAATCAAGTCCATACTGCTGAGGTAGAACCTCTGCGACAAGGCTCAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

630

Amino Acids

70.26

Weight (kDa)

5.36

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PA PF02225 64 - 163 9.1e-17 PA domain
VSR_TRX PF25011 190 - 397 1.8e-102 Vacuolar sorting receptor thioredoxin-like domain
cEGF PF12662 500 - 518 1.8e-06 Complement Clr-like EGF-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 743
AccI GTMKAC 1 cut(s) 218
AccIII TCCGGA 1 cut(s) 793
AciI CCGC 3 cut(s) 606, 741, 1721
AclWI GGATC 3 cut(s) 785, 1102, 1690
AcoI YGGCCR 1 cut(s) 1528
AcsI RAATTY 4 cut(s) 447, 643, 1221, 1480
AcuI CTGAAG 1 cut(s) 1056
AdeI CACNNNGTG 1 cut(s) 1190
AfaI GTAC 2 cut(s) 193, 1567
AfiI CCNNNNNNNGG 6 cut(s) 173, 212, 826, 895, 1351, 1829
AflIII ACRYGT 1 cut(s) 58
AgeI ACCGGT 1 cut(s) 888
AjnI CCWGG 1 cut(s) 1080
AjuI GAANNNNNNNTTGG 4 cut(s) 45, 77, 1068, 1100
AloI GAACNNNNNNTCC 2 cut(s) 1062, 1094
AluBI AGCT 7 cut(s) 233, 347, 458, 486, 856, 1067, 1593
AluI AGCT 7 cut(s) 233, 347, 458, 486, 856, 1067, 1593
Alw21I GWGCWC 1 cut(s) 787
Alw26I GTCTC 6 cut(s) 83, 264, 273, 759, 1199, 1669
Alw44I GTGCAC 1 cut(s) 783
AlwI GGATC 3 cut(s) 785, 1102, 1690
Aor13HI TCCGGA 1 cut(s) 793
AoxI GGCC 2 cut(s) 1528, 1839
ApaLI GTGCAC 1 cut(s) 783
ApeKI GCWGC 5 cut(s) 853, 1394, 1497, 1587, 1590
ApoI RAATTY 4 cut(s) 447, 643, 1221, 1480
AseI ATTAAT 1 cut(s) 1134
AsiGI ACCGGT 1 cut(s) 888
Asp700I GAANNNNTTC 1 cut(s) 644
AspLEI GCGC 1 cut(s) 971
AspS9I GGNCC 1 cut(s) 1403
AsuC2I CCSGG 1 cut(s) 770
AsuHPI GGTGA 5 cut(s) 254, 491, 535, 1115, 1141
AvaII GGWCC 1 cut(s) 1403
BaeGI GKGCMC 3 cut(s) 552, 787, 1346
BaeI ACNNNNGTAYC 2 cut(s) 183, 216
BalI TGGCCA 1 cut(s) 1530
BanII GRGCYC 1 cut(s) 613
BauI CACGAG 2 cut(s) 32, 1098
Bbv12I GWGCWC 1 cut(s) 787
BbvCI CCTCAGC 2 cut(s) 972, 1860
BbvI GCAGC 5 cut(s) 865, 1381, 1484, 1574, 1602
BceAI ACGGC 1 cut(s) 338
BciT130I CCWGG 1 cut(s) 1082
BciVI GTATCC 4 cut(s) 123, 213, 809, 1607
BclI TGATCA 1 cut(s) 559
BcnI CCSGG 1 cut(s) 770
BcoDI GTCTC 6 cut(s) 83, 264, 273, 759, 1199, 1669
BfaI CTAG 3 cut(s) 1259, 1449, 1826
BfmI CTRYAG 3 cut(s) 348, 1347, 1588
BfuI GTATCC 4 cut(s) 123, 213, 809, 1607
BglII AGATCT 1 cut(s) 1237
BisI GCNGC 6 cut(s) 854, 1395, 1498, 1588, 1591, 1722
BlsI GCNGC 6 cut(s) 855, 1396, 1499, 1589, 1592, 1723
Bme1390I CCNGG 2 cut(s) 770, 1082
Bme18I GGWCC 1 cut(s) 1403
BmgT120I GGNCC 1 cut(s) 1403
BmiI GGNNCC 1 cut(s) 181
BmrFI CCNGG 2 cut(s) 770, 1082
BmrI ACTGGG 1 cut(s) 231
BmsI GCATC 2 cut(s) 409, 484
BmuI ACTGGG 1 cut(s) 231
BpmI CTGGAG 2 cut(s) 556, 1752
Bpu10I CCTNAGC 2 cut(s) 972, 1860
BpuEI CTTGAG 3 cut(s) 318, 689, 868
BpuMI CCSGG 1 cut(s) 770
Bsa29I ATCGAT 1 cut(s) 1548
BsaBI GATNNNNATC 1 cut(s) 1530
BsaI GGTCTC 1 cut(s) 264
BsaJI CCNNGG 3 cut(s) 769, 820, 876
BsaWI WCCGGW 3 cut(s) 793, 888, 1290
BsaXI ACNNNNNCTCC 2 cut(s) 766, 796
Bsc4I CCNNNNNNNGG 6 cut(s) 173, 212, 826, 895, 1351, 1829
Bse118I RCCGGY 1 cut(s) 888
Bse1I ACTGG 4 cut(s) 226, 539, 1164, 1174
Bse3DI GCAATG 3 cut(s) 421, 601, 1534
Bse8I GATNNNNATC 1 cut(s) 1530
BseAI TCCGGA 1 cut(s) 793
BseBI CCWGG 1 cut(s) 1082
BseCI ATCGAT 1 cut(s) 1548
BseDI CCNNGG 3 cut(s) 769, 820, 876
BseGI GGATG 6 cut(s) 499, 553, 835, 982, 1360, 1531
BseJI GATNNNNATC 1 cut(s) 1530
BseLI CCNNNNNNNGG 6 cut(s) 173, 212, 826, 895, 1351, 1829
BseMI GCAATG 3 cut(s) 421, 601, 1534
BseMII CTCAG 6 cut(s) 116, 198, 275, 674, 963, 1851
BseNI ACTGG 4 cut(s) 226, 539, 1164, 1174
BseRI GAGGAG 1 cut(s) 422
BseSI GKGCMC 3 cut(s) 552, 787, 1346
BseXI GCAGC 5 cut(s) 865, 1381, 1484, 1574, 1602
BshFI GGCC 2 cut(s) 1530, 1841
BshTI ACCGGT 1 cut(s) 888
BshVI ATCGAT 1 cut(s) 1548
BsiHKAI GWGCWC 1 cut(s) 787
BsiSI CCGG 5 cut(s) 167, 769, 794, 889, 1291
BslI CCNNNNNNNGG 6 cut(s) 173, 212, 826, 895, 1351, 1829
BsmAI GTCTC 6 cut(s) 83, 264, 273, 759, 1199, 1669
BsmBI CGTCTC 1 cut(s) 83
BsmI GAATGC 4 cut(s) 334, 608, 971, 1559
BsnI GGCC 2 cut(s) 1530, 1841
Bso31I GGTCTC 1 cut(s) 264
Bsp1286I GDGCHC 4 cut(s) 552, 613, 787, 1346
Bsp13I TCCGGA 1 cut(s) 793
Bsp143I GATC 8 cut(s) 292, 559, 790, 1094, 1237, 1682, 1775, 1794
BspACI CCGC 3 cut(s) 606, 741, 1721
BspANI GGCC 2 cut(s) 1530, 1841
BspCNI CTCAG 6 cut(s) 117, 199, 274, 673, 964, 1852
BspDI ATCGAT 1 cut(s) 1548
BspEI TCCGGA 1 cut(s) 793
BspHI TCATGA 1 cut(s) 981
BspLI GGNNCC 1 cut(s) 181
BspMAI CTGCAG 1 cut(s) 1592
BspPI GGATC 3 cut(s) 785, 1102, 1690
BspQI GCTCTTC 1 cut(s) 372
BspTNI GGTCTC 1 cut(s) 264
BsrBI CCGCTC 1 cut(s) 743
BsrDI GCAATG 3 cut(s) 421, 601, 1534
BsrFI RCCGGY 1 cut(s) 888
BsrI ACTGG 4 cut(s) 226, 539, 1164, 1174
BssAI RCCGGY 1 cut(s) 888
BssECI CCNNGG 3 cut(s) 769, 820, 876
BssMI GATC 8 cut(s) 292, 559, 790, 1094, 1237, 1682, 1775, 1794
BssSI CACGAG 2 cut(s) 32, 1098
BssT1I CCWWGG 2 cut(s) 820, 876
Bst2BI CACGAG 2 cut(s) 32, 1098
Bst2UI CCWGG 1 cut(s) 1082
Bst4CI ACNGT 4 cut(s) 78, 196, 782, 959
Bst6I CTCTTC 2 cut(s) 372, 1324
BstAPI GCANNNNNTGC 2 cut(s) 1190, 1415
BstC8I GCNNGC 3 cut(s) 613, 1309, 1474
BstDEI CTNAG 8 cut(s) 125, 184, 207, 261, 660, 972, 1860, 1885
BstENI CCTNNNNNAGG 1 cut(s) 210
BstF5I GGATG 6 cut(s) 499, 553, 835, 982, 1360, 1531
BstHHI GCGC 1 cut(s) 971
BstKTI GATC 8 cut(s) 295, 562, 793, 1097, 1240, 1685, 1778, 1797
BstMAI GTCTC 6 cut(s) 83, 264, 273, 759, 1199, 1669
BstMBI GATC 8 cut(s) 292, 559, 790, 1094, 1237, 1682, 1775, 1794
BstMWI GCNNNNNNNGC 7 cut(s) 338, 612, 862, 1190, 1415, 1536, 1727
BstNI CCWGG 1 cut(s) 1082
BstNSI RCATGY 2 cut(s) 62, 1822
BstSCI CCNGG 2 cut(s) 768, 1080
BstSFI CTRYAG 3 cut(s) 348, 1347, 1588
BstSLI GKGCMC 3 cut(s) 552, 787, 1346
BstV1I GCAGC 5 cut(s) 865, 1381, 1484, 1574, 1602
BstX2I RGATCY 3 cut(s) 790, 1094, 1237
BstYI RGATCY 3 cut(s) 790, 1094, 1237
Bsu15I ATCGAT 1 cut(s) 1548
BsuI GTATCC 4 cut(s) 123, 213, 809, 1607
BsuRI GGCC 2 cut(s) 1530, 1841
BsuTUI ATCGAT 1 cut(s) 1548
BtgZI GCGATG 1 cut(s) 1389
BtsCI GGATG 6 cut(s) 499, 553, 835, 982, 1360, 1531
BtsIMutI CAGTG 2 cut(s) 552, 1583
Cac8I GCNNGC 3 cut(s) 613, 1309, 1474
CciI TCATGA 1 cut(s) 981
CfoI GCGC 1 cut(s) 971
Cfr10I RCCGGY 1 cut(s) 888
Cfr13I GGNCC 1 cut(s) 1403
ClaI ATCGAT 1 cut(s) 1548
Csp6I GTAC 2 cut(s) 192, 1566
CspAI ACCGGT 1 cut(s) 888
CspCI CAANNNNNGTGG 2 cut(s) 265, 300
CviQI GTAC 2 cut(s) 192, 1566
DdeI CTNAG 8 cut(s) 125, 184, 207, 261, 660, 972, 1860, 1885
DpnI GATC 8 cut(s) 294, 561, 792, 1096, 1239, 1684, 1777, 1796
DpnII GATC 8 cut(s) 292, 559, 790, 1094, 1237, 1682, 1775, 1794
DraIII CACNNNGTG 1 cut(s) 1190
EaeI YGGCCR 1 cut(s) 1528
Eam1104I CTCTTC 2 cut(s) 372, 1324
EarI CTCTTC 2 cut(s) 372, 1324
Eco130I CCWWGG 2 cut(s) 820, 876
Eco24I GRGCYC 1 cut(s) 613
Eco31I GGTCTC 1 cut(s) 264
Eco32I GATATC 1 cut(s) 1546
Eco47I GGWCC 1 cut(s) 1403
Eco57I CTGAAG 1 cut(s) 1056
EcoNI CCTNNNNNAGG 1 cut(s) 210
EcoRI GAATTC 1 cut(s) 447
EcoRII CCWGG 1 cut(s) 1080
EcoRV GATATC 1 cut(s) 1546
EcoT14I CCWWGG 2 cut(s) 820, 876
EcoT22I ATGCAT 2 cut(s) 764, 1025
EcoT38I GRGCYC 1 cut(s) 613
ErhI CCWWGG 2 cut(s) 820, 876
Esp3I CGTCTC 1 cut(s) 83
FauI CCCGC 1 cut(s) 599
FbaI TGATCA 1 cut(s) 559
FblI GTMKAC 1 cut(s) 218
Fnu4HI GCNGC 6 cut(s) 854, 1395, 1498, 1588, 1591, 1722
FokI GGATG 6 cut(s) 506, 540, 842, 989, 1367, 1538
FriOI GRGCYC 1 cut(s) 613
Fsp4HI GCNGC 6 cut(s) 854, 1395, 1498, 1588, 1591, 1722
FspBI CTAG 3 cut(s) 1259, 1449, 1826
GlaI GCGC 1 cut(s) 970
GluI GCNGC 6 cut(s) 854, 1395, 1498, 1588, 1591, 1722
GsuI CTGGAG 2 cut(s) 556, 1752
HaeIII GGCC 2 cut(s) 1530, 1841
HapII CCGG 5 cut(s) 167, 769, 794, 889, 1291
HhaI GCGC 1 cut(s) 971
Hin6I GCGC 1 cut(s) 969
HinP1I GCGC 1 cut(s) 969
HincII GTYRAC 1 cut(s) 1835
HindII GTYRAC 1 cut(s) 1835
HindIII AAGCTT 1 cut(s) 231
HinfI GANTC 7 cut(s) 121, 398, 542, 664, 1197, 1445, 1787
HpaII CCGG 5 cut(s) 167, 769, 794, 889, 1291
HphI GGTGA 5 cut(s) 254, 491, 535, 1115, 1141
Hpy166II GTNNAC 6 cut(s) 21, 219, 693, 785, 1508, 1835
Hpy188I TCNGA 7 cut(s) 126, 264, 663, 932, 1444, 1486, 1792
Hpy8I GTNNAC 6 cut(s) 21, 219, 693, 785, 1508, 1835
HpyAV CCTTC 4 cut(s) 313, 484, 806, 820
HpyCH4III ACNGT 4 cut(s) 78, 196, 782, 959
HpyCH4IV ACGT 1 cut(s) 1564
HpyF10VI GCNNNNNNNGC 7 cut(s) 338, 612, 862, 1190, 1415, 1536, 1727
HpyF3I CTNAG 8 cut(s) 125, 184, 207, 261, 660, 972, 1860, 1885
HpySE526I ACGT 1 cut(s) 1564
HspAI GCGC 1 cut(s) 969
Kpn2I TCCGGA 1 cut(s) 793
Ksp22I TGATCA 1 cut(s) 559
Kzo9I GATC 8 cut(s) 292, 559, 790, 1094, 1237, 1682, 1775, 1794
LguI GCTCTTC 1 cut(s) 372
LmnI GCTCC 3 cut(s) 185, 344, 1654
Lsp1109I GCAGC 5 cut(s) 865, 1381, 1484, 1574, 1602
LweI GCATC 2 cut(s) 409, 484
MaeI CTAG 3 cut(s) 1259, 1449, 1826
MaeII ACGT 1 cut(s) 1564
MaeIII GTNAC 9 cut(s) 242, 428, 479, 680, 913, 953, 1108, 1748, 1809
MalI GATC 8 cut(s) 294, 561, 792, 1096, 1239, 1684, 1777, 1796
MbiI CCGCTC 1 cut(s) 743
MboI GATC 8 cut(s) 292, 559, 790, 1094, 1237, 1682, 1775, 1794
MboII GAAGA 6 cut(s) 389, 451, 524, 1049, 1341, 1553
MflI RGATCY 3 cut(s) 790, 1094, 1237
MhlI GDGCHC 4 cut(s) 552, 613, 787, 1346
MlsI TGGCCA 1 cut(s) 1530
MluCI AATT 6 cut(s) 387, 447, 643, 1221, 1297, 1480
MluNI TGGCCA 1 cut(s) 1530
MlyI GAGTC 4 cut(s) 115, 392, 551, 1781
Mox20I TGGCCA 1 cut(s) 1530
Mph1103I ATGCAT 2 cut(s) 764, 1025
MroI TCCGGA 1 cut(s) 793
MroXI GAANNNNTTC 1 cut(s) 644
MscI TGGCCA 1 cut(s) 1530
MseI TTAA 6 cut(s) 102, 1014, 1062, 1134, 1301, 1460
MslI CAYNNNNRTG 2 cut(s) 63, 141
Msp20I TGGCCA 1 cut(s) 1530
MspA1I CMGCKG 1 cut(s) 1593
MspI CCGG 5 cut(s) 167, 769, 794, 889, 1291
MspR9I CCNGG 2 cut(s) 770, 1082
Mva1269I GAATGC 4 cut(s) 334, 608, 971, 1559
MvaI CCWGG 1 cut(s) 1082
MwoI GCNNNNNNNGC 7 cut(s) 338, 612, 862, 1190, 1415, 1536, 1727
NciI CCSGG 1 cut(s) 770
NdeII GATC 8 cut(s) 292, 559, 790, 1094, 1237, 1682, 1775, 1794
NlaIV GGNNCC 1 cut(s) 181
NmuCI GTSAC 4 cut(s) 242, 479, 913, 1809
NsiI ATGCAT 2 cut(s) 764, 1025
NspI RCATGY 2 cut(s) 62, 1822
PagI TCATGA 1 cut(s) 981
PciI ACATGT 1 cut(s) 58
PciSI GCTCTTC 1 cut(s) 372
PcsI WCGNNNNNNNCGW 2 cut(s) 1096, 1691
PctI GAATGC 4 cut(s) 334, 608, 971, 1559
PdmI GAANNNNTTC 1 cut(s) 644
PfeI GAWTC 3 cut(s) 664, 1197, 1445
PinAI ACCGGT 1 cut(s) 888
PkrI GCNGC 6 cut(s) 855, 1396, 1499, 1589, 1592, 1723
PleI GAGTC 4 cut(s) 115, 392, 550, 1781
PpsI GAGTC 4 cut(s) 115, 392, 550, 1781
PscI ACATGT 1 cut(s) 58
PshBI ATTAAT 1 cut(s) 1134
Psp6I CCWGG 1 cut(s) 1080
PspGI CCWGG 1 cut(s) 1080
PspN4I GGNNCC 1 cut(s) 181
PspPI GGNCC 1 cut(s) 1403
PstI CTGCAG 1 cut(s) 1592
PsuI RGATCY 3 cut(s) 790, 1094, 1237
PvuII CAGCTG 1 cut(s) 1593
RsaI GTAC 2 cut(s) 193, 1567
RsaNI GTAC 2 cut(s) 192, 1566
RseI CAYNNNNRTG 2 cut(s) 63, 141
SapI GCTCTTC 1 cut(s) 372
SaqAI TTAA 6 cut(s) 102, 1014, 1062, 1134, 1301, 1460
SatI GCNGC 6 cut(s) 854, 1395, 1498, 1588, 1591, 1722
Sau3AI GATC 8 cut(s) 292, 559, 790, 1094, 1237, 1682, 1775, 1794
Sau96I GGNCC 1 cut(s) 1403
SchI GAGTC 4 cut(s) 115, 392, 551, 1781
ScrFI CCNGG 2 cut(s) 770, 1082
SduI GDGCHC 4 cut(s) 552, 613, 787, 1346
SfaNI GCATC 2 cut(s) 409, 484
SfcI CTRYAG 3 cut(s) 348, 1347, 1588
SinI GGWCC 1 cut(s) 1403
SmiMI CAYNNNNRTG 2 cut(s) 63, 141
SmlI CTYRAG 3 cut(s) 333, 668, 847
SmoI CTYRAG 3 cut(s) 333, 668, 847
Sse9I AATT 6 cut(s) 387, 447, 643, 1221, 1297, 1480
SsiI CCGC 3 cut(s) 606, 741, 1721
SspMI CTAG 3 cut(s) 1259, 1449, 1826
StyD4I CCNGG 2 cut(s) 768, 1080
StyI CCWWGG 2 cut(s) 820, 876
TaaI ACNGT 4 cut(s) 78, 196, 782, 959
TaiI ACGT 1 cut(s) 1567
TaqI TCGA 6 cut(s) 1005, 1090, 1150, 1548, 1685, 1774
TasI AATT 6 cut(s) 387, 447, 643, 1221, 1297, 1480
TauI GCSGC 1 cut(s) 1724
TfiI GAWTC 3 cut(s) 664, 1197, 1445
Tru1I TTAA 6 cut(s) 102, 1014, 1062, 1134, 1301, 1460
Tru9I TTAA 6 cut(s) 102, 1014, 1062, 1134, 1301, 1460
TscAI CASTG 2 cut(s) 552, 1583
TseFI GTSAC 4 cut(s) 242, 479, 913, 1809
TseI GCWGC 5 cut(s) 853, 1394, 1497, 1587, 1590
Tsp45I GTSAC 4 cut(s) 242, 479, 913, 1809
TspDTI ATGAA 7 cut(s) 525, 956, 998, 1068, 1566, 1690, 1699
TspGWI ACGGA 1 cut(s) 1248
TspRI CASTG 2 cut(s) 552, 1583
VneI GTGCAC 1 cut(s) 783
VpaK11BI GGWCC 1 cut(s) 1403
VspI ATTAAT 1 cut(s) 1134
XagI CCTNNNNNAGG 1 cut(s) 210
XapI RAATTY 4 cut(s) 447, 643, 1221, 1480
XbaI TCTAGA 3 cut(s) 1258, 1448, 1825
XceI RCATGY 2 cut(s) 62, 1822
XmiI GTMKAC 1 cut(s) 218
XmnI GAANNNNTTC 1 cut(s) 644
XspI CTAG 3 cut(s) 1259, 1449, 1826
Zsp2I ATGCAT 2 cut(s) 764, 1025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.