RchiOBHm_Chr4g0418071

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000053
Physical Location & Seq
Forward (+)
43520699 .. 43527197
6499 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38808

Sequence Viewer

Length: 1695 bp
ATGTCTGTCCAACTTTCTTCAGCATCTAAAGCTCAAAGCCCAAATGCCACTGCTGATGTTAAGCGACGTTCATCTAACCTTGCGCCTAGCATTTGGGGCGACTATTTTCTATCATATGCTTCCATGGAAGTGGATATTTCTCTTGAGCAACAGGTTCAACAACTGAAGGAAGAAGTGAAAAGGATGCTTATGCATAATGTTAAAGACGATTCACAAAAACTAAGCTTGATTGATGACATTCAACTCTTGGGCGTGTCCTACCATTTCAACAATGAGATTTGTGAAATTTTGCAACAAATATTTGACAATGACCATGTTTCATATGATGATCTTCATCAAAATAATTCTGACCTTTATGCAGTTGCTCTTCGTTTCCGATTGCTTCGGCAACAAGGATACAATGCTTCATGTGAAATGTACTTCAGCAACTTGAAAGACAATGATGGGAAATTCAAGGAATCACTTGCCTGTGATACAAAAGGACTACTAGGCTTGTATGAAGCCACGCATCTTCGGACACACGGTGATGACATACTTGACGAGGCACTAGCCTTCACCACAACTCATCTTGAGGCTGCAACACGCCGTGGTTTAAGCTCCCCACTTTTGAAACAAGTAACTCACGCCTTGTATCAGCCACTTTGGAAGGGCATGTCAAGGATAGAAGTGAGGCATTACTTATCTACCTACCAAGAAAACGATTCTCATGATGAAACTCTCCTGAATTTTGCACGGCTGGATTTCAACCTACTGCAGCAACTCTATCAAAAAGAACTATGTGAAATTACAAGGTGGTGGAAGGATTTGGACTTCGTGAAGAACTCATCTTTTGCGAGAGATAGGTTGGTTGAGAGCTACGTTTGCGCTTTGGGAACCCTCTTTGAGCCAGAATATTACTTTGCTAGGAAGACATTAAGCAAAGTTATTTACATGGTAGCCGTGCTTGATGACATGTTTGATGTTTATGGCACACTTGAAGAGCTAGAGCTCTTTAATGAAGCTATTCAGAGGTGGCACATCTCTGCCATGGATCAATTGCCTGAAGACTATATGAAATTCGTTTATAAGGCACTGTTGGATGTCTACACTGAAATTGAAGAAAAGCTTGCAAGCGAGGGAAACTTGTATGGCATTCACCATGCAAGAGAATCGATGAAAATCCATGTCGATGGTTACATGAAAGAAGCTAGATGGTTTTACTCGAAATACACCCCAACTTTTGATGAATATTTGCCGCTAGCAAATGTTACATCCTTGTATTCGCTGTCAATAGCATCCGTTGTTGGAATGGGACGTGCTGCTACAAAAGACTCCTTGGATTGGTTATTCACTGATCCTGGGATCGTAAACGCTGCATCATTAATTGGCAGACTCTTAAACGACATTATGTCGCATCAGTTCGAACAACAGAGAGGGCATTCTGCTTCAGCTGTGGAATTATATATGAAAGAACATGGTGCTACAGAAGAAGAAGCCATAGCAGAACTAACTAATCAAGTGAATGATGCATGGAAGGTCATAAACAAAGCTTGCCTCCACCCTACCCGAATCCCATTGCCGGTTCTAATGCGACCTCTCAACCTTGCACGTTTGATGGAAGTTCTTTACAAGAATGTAGATTCCTTTACGAAGCCTGGAGTTGAGTTCAATGGTTTTGTGACTTCTCTGCTTATCGAACCCGTGCCTACTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

564

Amino Acids

64.74

Weight (kDa)

5.16

Isoelectric Point (pI)

50.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 31 - 210 8.9e-55 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 267 - 505 3.3e-88 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 307 - 505 7.6e-55 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1065
AccI GTMKAC 1 cut(s) 1083
AciI CCGC 1 cut(s) 1235
AclWI GGATC 3 cut(s) 1038, 1328, 1349
AcsI RAATTY 4 cut(s) 285, 449, 724, 1055
AcuI CTGAAG 4 cut(s) 185, 406, 1062, 1410
AdeI CACNNNGTG 2 cut(s) 524, 587
AfaI GTAC 1 cut(s) 419
AfiI CCNNNNNNNGG 2 cut(s) 1320, 1558
AflIII ACRYGT 1 cut(s) 951
AhdI GACNNNNNGTC 1 cut(s) 1387
AjiI CACGTC 1 cut(s) 1295
AjnI CCWGG 2 cut(s) 1336, 1633
Alw21I GWGCWC 1 cut(s) 990
AlwI GGATC 3 cut(s) 1038, 1328, 1349
ApeKI GCWGC 4 cut(s) 575, 754, 1298, 1352
ApoI RAATTY 4 cut(s) 285, 449, 724, 1055
AseI ATTAAT 1 cut(s) 1361
Asp700I GAANNNNTTC 1 cut(s) 1002
AspLEI GCGC 2 cut(s) 85, 866
AsuHPI GGTGA 3 cut(s) 536, 547, 1127
AsuII TTCGAA 1 cut(s) 1401
AsuNHI GCTAGC 1 cut(s) 1237
BanII GRGCYC 1 cut(s) 990
BbsI GAAGAC 2 cut(s) 914, 1050
Bbv12I GWGCWC 1 cut(s) 990
BbvI GCAGC 4 cut(s) 562, 766, 1285, 1339
BccI CCATC 4 cut(s) 437, 1163, 1185, 1588
BceAI ACGGC 3 cut(s) 570, 749, 923
BcgI CGANNNNNNTGC 2 cut(s) 1131, 1165
BciT130I CCWGG 2 cut(s) 1338, 1635
BciVI GTATCC 1 cut(s) 389
BfaI CTAG 7 cut(s) 87, 488, 548, 903, 983, 1188, 1238
BfmI CTRYAG 2 cut(s) 752, 1461
BfuI GTATCC 1 cut(s) 389
BisI GCNGC 5 cut(s) 576, 755, 1235, 1299, 1353
BlsI GCNGC 5 cut(s) 577, 756, 1236, 1300, 1354
Bme1390I CCNGG 2 cut(s) 1338, 1635
BmeRI GACNNNNNGTC 1 cut(s) 1387
BmgBI CACGTC 1 cut(s) 1295
BmiI GGNNCC 1 cut(s) 874
BmrFI CCNGG 2 cut(s) 1338, 1635
BmsI GCATC 7 cut(s) 32, 174, 517, 1283, 1364, 1402, 1495
BmtI GCTAGC 1 cut(s) 1241
BpiI GAAGAC 2 cut(s) 914, 1050
BpmI CTGGAG 1 cut(s) 1656
Bpu14I TTCGAA 1 cut(s) 1401
BpuEI CTTGAG 2 cut(s) 164, 590
Bsa29I ATCGAT 1 cut(s) 1151
BsaBI GATNNNNATC 2 cut(s) 333, 1157
BsaJI CCNNGG 5 cut(s) 123, 586, 1026, 1314, 1337
Bsc4I CCNNNNNNNGG 2 cut(s) 1320, 1558
Bse118I RCCGGY 1 cut(s) 1558
Bse3DI GCAATG 1 cut(s) 1553
Bse8I GATNNNNATC 2 cut(s) 333, 1157
BseBI CCWGG 2 cut(s) 1338, 1635
BseCI ATCGAT 1 cut(s) 1151
BseDI CCNNGG 5 cut(s) 123, 586, 1026, 1314, 1337
BseGI GGATG 4 cut(s) 189, 1084, 1250, 1274
BseJI GATNNNNATC 2 cut(s) 333, 1157
BseLI CCNNNNNNNGG 2 cut(s) 1320, 1558
BseMI GCAATG 1 cut(s) 1553
BseXI GCAGC 4 cut(s) 562, 766, 1285, 1339
BshVI ATCGAT 1 cut(s) 1151
BsiHKAI GWGCWC 1 cut(s) 990
BsiSI CCGG 1 cut(s) 1559
BslFI GGGAC 1 cut(s) 1305
BslI CCNNNNNNNGG 2 cut(s) 1320, 1558
BsmFI GGGAC 1 cut(s) 1305
BsmI GAATGC 2 cut(s) 1131, 1417
Bsp119I TTCGAA 1 cut(s) 1401
Bsp1286I GDGCHC 1 cut(s) 990
Bsp143I GATC 4 cut(s) 328, 1030, 1333, 1341
Bsp19I CCATGG 2 cut(s) 123, 1026
BspACI CCGC 1 cut(s) 1235
BspDI ATCGAT 1 cut(s) 1151
BspHI TCATGA 1 cut(s) 706
BspLI GGNNCC 1 cut(s) 874
BspMAI CTGCAG 1 cut(s) 756
BspOI GCTAGC 1 cut(s) 1241
BspPI GGATC 3 cut(s) 1038, 1328, 1349
BspQI GCTCTTC 2 cut(s) 372, 972
BspT104I TTCGAA 1 cut(s) 1401
BsrDI GCAATG 1 cut(s) 1553
BsrFI RCCGGY 1 cut(s) 1558
BssAI RCCGGY 1 cut(s) 1558
BssECI CCNNGG 5 cut(s) 123, 586, 1026, 1314, 1337
BssMI GATC 4 cut(s) 328, 1030, 1333, 1341
BssT1I CCWWGG 3 cut(s) 123, 1026, 1314
Bst2UI CCWGG 2 cut(s) 1338, 1635
Bst4CI ACNGT 2 cut(s) 524, 1074
Bst6I CTCTTC 2 cut(s) 372, 972
BstBI TTCGAA 1 cut(s) 1401
BstC8I GCNNGC 4 cut(s) 1107, 1111, 1239, 1531
BstDEI CTNAG 1 cut(s) 221
BstDSI CCRYGG 3 cut(s) 123, 586, 1026
BstF5I GGATG 4 cut(s) 189, 1084, 1250, 1274
BstHHI GCGC 2 cut(s) 85, 866
BstKTI GATC 4 cut(s) 331, 1033, 1336, 1344
BstMBI GATC 4 cut(s) 328, 1030, 1333, 1341
BstMWI GCNNNNNNNGC 3 cut(s) 29, 96, 861
BstNI CCWGG 2 cut(s) 1338, 1635
BstNSI RCATGY 2 cut(s) 655, 955
BstSCI CCNGG 2 cut(s) 1336, 1633
BstSFI CTRYAG 2 cut(s) 752, 1461
BstV1I GCAGC 4 cut(s) 562, 766, 1285, 1339
BstV2I GAAGAC 2 cut(s) 914, 1050
BstXI CCANNNNNNTGG 2 cut(s) 130, 1169
Bsu15I ATCGAT 1 cut(s) 1151
BsuI GTATCC 1 cut(s) 389
BsuTUI ATCGAT 1 cut(s) 1151
BtgI CCRYGG 3 cut(s) 123, 586, 1026
BtrI CACGTC 1 cut(s) 1295
BtsCI GGATG 4 cut(s) 189, 1084, 1250, 1274
BtsI GCAGTG 1 cut(s) 48
BtsIMutI CAGTG 4 cut(s) 48, 1070, 1086, 1329
Cac8I GCNNGC 4 cut(s) 1107, 1111, 1239, 1531
CciI TCATGA 1 cut(s) 706
CfoI GCGC 2 cut(s) 85, 866
Cfr10I RCCGGY 1 cut(s) 1558
ClaI ATCGAT 1 cut(s) 1151
Csp6I GTAC 1 cut(s) 418
CviQI GTAC 1 cut(s) 418
DdeI CTNAG 1 cut(s) 221
DpnI GATC 4 cut(s) 330, 1032, 1335, 1343
DpnII GATC 4 cut(s) 328, 1030, 1333, 1341
DraIII CACNNNGTG 2 cut(s) 524, 587
DriI GACNNNNNGTC 1 cut(s) 1387
Eam1104I CTCTTC 2 cut(s) 372, 972
Eam1105I GACNNNNNGTC 1 cut(s) 1387
EarI CTCTTC 2 cut(s) 372, 972
Ecl136II GAGCTC 1 cut(s) 988
Eco130I CCWWGG 3 cut(s) 123, 1026, 1314
Eco24I GRGCYC 1 cut(s) 990
Eco53kI GAGCTC 1 cut(s) 988
Eco57I CTGAAG 4 cut(s) 185, 406, 1062, 1410
EcoICRI GAGCTC 1 cut(s) 988
EcoRII CCWGG 2 cut(s) 1336, 1633
EcoT14I CCWWGG 3 cut(s) 123, 1026, 1314
EcoT22I ATGCAT 2 cut(s) 195, 1510
EcoT38I GRGCYC 1 cut(s) 990
ErhI CCWWGG 3 cut(s) 123, 1026, 1314
FalI AAGNNNNNCTT 2 cut(s) 1089, 1121
FaqI GGGAC 1 cut(s) 1305
FauNDI CATATG 2 cut(s) 115, 322
FblI GTMKAC 1 cut(s) 1083
Fnu4HI GCNGC 5 cut(s) 576, 755, 1235, 1299, 1353
FokI GGATG 4 cut(s) 196, 1091, 1237, 1261
FriOI GRGCYC 1 cut(s) 990
Fsp4HI GCNGC 5 cut(s) 576, 755, 1235, 1299, 1353
FspBI CTAG 7 cut(s) 87, 488, 548, 903, 983, 1188, 1238
GlaI GCGC 2 cut(s) 84, 865
GluI GCNGC 5 cut(s) 576, 755, 1235, 1299, 1353
GsuI CTGGAG 1 cut(s) 1656
HapII CCGG 1 cut(s) 1559
HhaI GCGC 2 cut(s) 85, 866
Hin6I GCGC 2 cut(s) 83, 864
HinP1I GCGC 2 cut(s) 83, 864
HindIII AAGCTT 3 cut(s) 223, 1103, 1527
HinfI GANTC 8 cut(s) 209, 458, 701, 1148, 1310, 1371, 1548, 1619
HpaII CCGG 1 cut(s) 1559
HphI GGTGA 3 cut(s) 536, 547, 1127
Hpy166II GTNNAC 2 cut(s) 1084, 1348
Hpy188I TCNGA 4 cut(s) 349, 377, 516, 1008
Hpy188III TCNNGA 5 cut(s) 143, 569, 707, 721, 814
Hpy8I GTNNAC 2 cut(s) 1084, 1348
Hpy99I CGWCG 1 cut(s) 69
HpyAV CCTTC 5 cut(s) 160, 562, 640, 793, 1507
HpyCH4III ACNGT 2 cut(s) 524, 1074
HpyCH4IV ACGT 4 cut(s) 67, 858, 1294, 1588
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 96, 861
HpyF3I CTNAG 1 cut(s) 221
HpySE526I ACGT 4 cut(s) 67, 858, 1294, 1588
HspAI GCGC 2 cut(s) 83, 864
Kzo9I GATC 4 cut(s) 328, 1030, 1333, 1341
LguI GCTCTTC 2 cut(s) 372, 972
LmnI GCTCC 1 cut(s) 602
Lsp1109I GCAGC 4 cut(s) 562, 766, 1285, 1339
LweI GCATC 7 cut(s) 32, 174, 517, 1283, 1364, 1402, 1495
MaeI CTAG 7 cut(s) 87, 488, 548, 903, 983, 1188, 1238
MaeII ACGT 4 cut(s) 67, 858, 1294, 1588
MaeIII GTNAC 4 cut(s) 616, 1172, 1246, 1657
MalI GATC 4 cut(s) 330, 1032, 1335, 1343
MboI GATC 4 cut(s) 328, 1030, 1333, 1341
MfeI CAATTG 1 cut(s) 1034
MhlI GDGCHC 1 cut(s) 990
MlyI GAGTC 2 cut(s) 1304, 1365
MmeI TCCRAC 3 cut(s) 34, 1056, 1264
MnlI CCTC 9 cut(s) 535, 565, 663, 887, 1002, 1108, 1406, 1544, 1584
Mph1103I ATGCAT 2 cut(s) 195, 1510
MroXI GAANNNNTTC 1 cut(s) 1002
MseI TTAA 7 cut(s) 60, 201, 593, 914, 993, 1361, 1376
MslI CAYNNNNRTG 3 cut(s) 128, 525, 1167
MspA1I CMGCKG 1 cut(s) 1430
MspI CCGG 1 cut(s) 1559
MspR9I CCNGG 2 cut(s) 1338, 1635
MunI CAATTG 1 cut(s) 1034
Mva1269I GAATGC 2 cut(s) 1131, 1417
MvaI CCWGG 2 cut(s) 1338, 1635
MwoI GCNNNNNNNGC 3 cut(s) 29, 96, 861
NcoI CCATGG 2 cut(s) 123, 1026
NdeI CATATG 2 cut(s) 115, 322
NdeII GATC 4 cut(s) 328, 1030, 1333, 1341
NheI GCTAGC 1 cut(s) 1237
NlaIV GGNNCC 1 cut(s) 874
NmuCI GTSAC 1 cut(s) 1657
NsiI ATGCAT 2 cut(s) 195, 1510
NspI RCATGY 2 cut(s) 655, 955
NspV TTCGAA 1 cut(s) 1401
PagI TCATGA 1 cut(s) 706
PciI ACATGT 1 cut(s) 951
PciSI GCTCTTC 2 cut(s) 372, 972
PctI GAATGC 2 cut(s) 1131, 1417
PdmI GAANNNNTTC 1 cut(s) 1002
PfeI GAWTC 6 cut(s) 209, 458, 701, 1148, 1548, 1619
PkrI GCNGC 5 cut(s) 577, 756, 1236, 1300, 1354
PleI GAGTC 2 cut(s) 1304, 1365
PpsI GAGTC 2 cut(s) 1304, 1365
PscI ACATGT 1 cut(s) 951
PshBI ATTAAT 1 cut(s) 1361
PsiI TTATAA 1 cut(s) 1065
Psp124BI GAGCTC 1 cut(s) 990
Psp6I CCWGG 2 cut(s) 1336, 1633
PspGI CCWGG 2 cut(s) 1336, 1633
PspN4I GGNNCC 1 cut(s) 874
PstI CTGCAG 1 cut(s) 756
PvuII CAGCTG 1 cut(s) 1430
RsaI GTAC 1 cut(s) 419
RsaNI GTAC 1 cut(s) 418
RseI CAYNNNNRTG 3 cut(s) 128, 525, 1167
SacI GAGCTC 1 cut(s) 990
SapI GCTCTTC 2 cut(s) 372, 972
SaqAI TTAA 7 cut(s) 60, 201, 593, 914, 993, 1361, 1376
SatI GCNGC 5 cut(s) 576, 755, 1235, 1299, 1353
Sau3AI GATC 4 cut(s) 328, 1030, 1333, 1341
SchI GAGTC 2 cut(s) 1304, 1365
ScrFI CCNGG 2 cut(s) 1338, 1635
SduI GDGCHC 1 cut(s) 990
SfaNI GCATC 7 cut(s) 32, 174, 517, 1283, 1364, 1402, 1495
SfcI CTRYAG 2 cut(s) 752, 1461
SfuI TTCGAA 1 cut(s) 1401
SmiMI CAYNNNNRTG 3 cut(s) 128, 525, 1167
SmlI CTYRAG 2 cut(s) 143, 569
SmoI CTYRAG 2 cut(s) 143, 569
SsiI CCGC 1 cut(s) 1235
SspI AATATT 3 cut(s) 300, 893, 1229
SspMI CTAG 7 cut(s) 87, 488, 548, 903, 983, 1188, 1238
SstI GAGCTC 1 cut(s) 990
StyD4I CCNGG 2 cut(s) 1336, 1633
StyI CCWWGG 3 cut(s) 123, 1026, 1314
TaaI ACNGT 2 cut(s) 524, 1074
TaiI ACGT 4 cut(s) 70, 861, 1297, 1591
TaqI TCGA 5 cut(s) 1151, 1167, 1202, 1401, 1674
TatI WGTACW 1 cut(s) 417
TauI GCSGC 1 cut(s) 1237
TfiI GAWTC 6 cut(s) 209, 458, 701, 1148, 1548, 1619
Tru1I TTAA 7 cut(s) 60, 201, 593, 914, 993, 1361, 1376
Tru9I TTAA 7 cut(s) 60, 201, 593, 914, 993, 1361, 1376
TscAI CASTG 4 cut(s) 55, 1077, 1093, 1336
TseFI GTSAC 1 cut(s) 1657
TseI GCWGC 4 cut(s) 575, 754, 1298, 1352
Tsp45I GTSAC 1 cut(s) 1657
TspGWI ACGGA 1 cut(s) 1267
TspRI CASTG 4 cut(s) 55, 1077, 1093, 1336
VspI ATTAAT 1 cut(s) 1361
XapI RAATTY 4 cut(s) 285, 449, 724, 1055
XceI RCATGY 2 cut(s) 655, 955
XmiI GTMKAC 1 cut(s) 1083
XmnI GAANNNNTTC 1 cut(s) 1002
XspI CTAG 7 cut(s) 87, 488, 548, 903, 983, 1188, 1238
Zsp2I ATGCAT 2 cut(s) 195, 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.