FvH4_5g06470

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000053
Physical Location & Seq
Forward (+)
3803069 .. 3805453
2385 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g06470.t1

Sequence Viewer

Length: 1713 bp
ATGGATCCTCTGTTGGTTTCAGCATCTCAAGCTCAAACCCAAAATGGCAGTAGCACTGCAGATGTTGAACGACGTTCAGCAAATTTTTCTCCCAGCGTTTGGGGGGAATATTTTCTGGCATATGCATCTGTGGAAACTGCTGATATTCAAGCCGACAAACGTGTCAAAGAACTGAAGGAAGAAGTGAAGAGGGTGCTACTTAGTTCTCCGCCTTCACAGAGATTAGACTTGATTGATTACATTCAGCGCTTGGGGTTGTCACACCATTTTGAGGATGAGATTCACCAATTTTTGCAGCAAATTCACAACCAATACTCATCTGCTTCTTCAGATGATGATGACCTTCACACTGTTGCTCTACGTTTTCGGCTGCTTAGGCAAGAAGGATTTAATAAGGTTTCATGCGACATGTTCAACAAGTTCATCGATGTTGATGGGAATCTTAAGGAATCATGCGTCGCTGACGTACCAGGACTGCTAAGTTTGTATGAAACAGCACATCTAAGGAAACATGGAGAAGATTTCCTAGATCGAGCAATGTCCTTCACTACCACTCATCTTGAGTCTGCAGTGGCAGCACCCGGCCGTTTAAGCCCCTCACTTTCAAATCAAGTAGCTCATGCCTTGTATCAACCACTCTGGAAAGGAAACCCGAGGATAGAAGCTAGGCATTACCTCTCTAGCTACCAGGAACTCAACAGTGCTCCACATTTTAGCCAAAGTCTCTTGACTTTTGCAAAGTTGGATTTTAATTTTTTCCAGCGTATCCATCAGAAAGAACTAAGTGAAATCACAAGGTGGTGGAAGGAGTTGGACTTTGTAAACAAACTACCGTTTGCAAGGGATCGAATAGTAGAGTGTTACTTTTGGTCTTTGGGAGTCTGCTTTGAGCCCAAGTATCGTCTTCCGAGGGAAACATTATGCAAAATTCTTGGCTTACTTACCATGATTGATGACACTTTCGATACGTATGGCAAACTTGATGAACTAGAGCTCTTTACTGAAGCTATTCAGAGGTGGGATCTCTCTGCCATGGATTCACTGCCTGACTATATGAAAATTATCTATGAGGCAGTGCTGAATGCCTACACTGAGATTGAAGCCGAGCTTGCCAAGGAGGGAAACTCGTATCGCATTGCCTATTTAGTAGAAGGAACGCAATGTCTAGTTAGAGCTTACATGAAGGAAGCCAAATGGTACCACCTAAAGTGCACACCGAAAACCTATGATGAATACATGAGGGTGGGACTTATTACATCCGGCATGTTTTTGGTAGAAGCAGCAGTCATTGTTCCATTAGCCGGTGAAATTTCGACAAGAGATTCCTTGGAATCGTTGTTCAGAGACCCTAACAACAAAATTGTATATGCTTCAAACATACTTGGGAGACTTCTGAATGACATCCGAAGCCACAAGCATGCGCAAAAGAGAGGAAATGATTTTTCAGCTATACAATGCTACATGAAAGAACACTATGTTACAGAAGAAGAAGCGCTGATCGAACTGAATAAACAAGTGAATGACGCATGGAAGGATGTAAACGAAGTATTGCTCCAGCCTCCCACGACTGTGCCCAGGCCAATACTGTTGCTGTGTCTCAATCTTCTACGAGTAACTGATGTTATATACAAGAACGACGATGGTTATACTAATGGTGGAGTTGTGCTTAAGGATTATATAACTTCTCTGCTTGTCGAACCTGCTCCAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

571

Amino Acids

65.41

Weight (kDa)

5.37

Isoelectric Point (pI)

46.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 34 - 209 3.1e-53 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 269 - 512 1.1e-86 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 309 - 512 3.2e-47 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 161
Acc16I TGCGCA 1 cut(s) 1422
Acc36I ACCTGC 1 cut(s) 1708
Acc65I GGTACC 1 cut(s) 1197
AccB1I GGYRCC 1 cut(s) 1197
AccB7I CCANNNNNTGG 1 cut(s) 99
AciI CCGC 1 cut(s) 209
AclWI GGATC 3 cut(s) 12, 852, 1029
AcoI YGGCCR 1 cut(s) 583
AcsI RAATTY 4 cut(s) 82, 300, 927, 1308
AcuI CTGAAG 3 cut(s) 194, 312, 1023
AdeI CACNNNGTG 1 cut(s) 798
AfaI GTAC 2 cut(s) 468, 1199
AfeI AGCGCT 2 cut(s) 248, 1494
AfiI CCNNNNNNNGG 3 cut(s) 99, 271, 1301
AflII CTTAAG 2 cut(s) 443, 1667
AflIII ACRYGT 2 cut(s) 160, 408
AgsI TTSAA 6 cut(s) 68, 149, 415, 606, 1100, 1374
AjnI CCWGG 3 cut(s) 469, 687, 1574
AleI CACNNNNGTG 1 cut(s) 1568
AloI GAACNNNNNNTCC 2 cut(s) 1322, 1354
AluBI AGCT 9 cut(s) 32, 617, 665, 684, 994, 1007, 1108, 1175, 1448
AluI AGCT 9 cut(s) 32, 617, 665, 684, 994, 1007, 1108, 1175, 1448
Alw21I GWGCWC 3 cut(s) 706, 996, 1214
Alw26I GTCTC 4 cut(s) 728, 1338, 1381, 1601
Alw44I GTGCAC 1 cut(s) 1210
AlwI GGATC 3 cut(s) 12, 852, 1029
Ama87I CYCGRG 1 cut(s) 652
Aor51HI AGCGCT 2 cut(s) 248, 1494
AoxI GGCC 2 cut(s) 583, 1577
ApaLI GTGCAC 1 cut(s) 1210
ApeKI GCWGC 4 cut(s) 295, 370, 575, 1280
ApoI RAATTY 4 cut(s) 82, 300, 927, 1308
Asp700I GAANNNNTTC 2 cut(s) 111, 1008
Asp718I GGTACC 1 cut(s) 1197
AspLEI GCGC 3 cut(s) 249, 1423, 1495
AsuC2I CCSGG 1 cut(s) 582
AsuHPI GGTGA 2 cut(s) 275, 1316
AvaI CYCGRG 1 cut(s) 652
BaeGI GKGCMC 2 cut(s) 1214, 1575
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 1197
BanII GRGCYC 2 cut(s) 894, 996
BbsI GAAGAC 1 cut(s) 896
Bbv12I GWGCWC 3 cut(s) 706, 996, 1214
BbvI GCAGC 4 cut(s) 307, 357, 587, 1292
BccI CCATC 3 cut(s) 428, 777, 1634
BceAI ACGGC 1 cut(s) 570
BciT130I CCWGG 3 cut(s) 471, 689, 1576
BciVI GTATCC 1 cut(s) 776
BcnI CCSGG 1 cut(s) 582
BcoDI GTCTC 4 cut(s) 728, 1338, 1381, 1601
BfaI CTAG 5 cut(s) 527, 666, 681, 989, 1166
BfmI CTRYAG 2 cut(s) 57, 567
BfoI RGCGCY 2 cut(s) 250, 1496
BfrI CTTAAG 2 cut(s) 443, 1667
BfuAI ACCTGC 1 cut(s) 1708
BfuI GTATCC 1 cut(s) 776
BisI GCNGC 4 cut(s) 296, 371, 576, 1281
BlsI GCNGC 4 cut(s) 297, 372, 577, 1282
Bme1390I CCNGG 4 cut(s) 471, 582, 689, 1576
BmeT110I CYCGRG 1 cut(s) 652
BmiI GGNNCC 2 cut(s) 6, 1199
BmrFI CCNGG 4 cut(s) 471, 582, 689, 1576
BmsI GCATC 2 cut(s) 32, 134
BpiI GAAGAC 1 cut(s) 896
BplI GAGNNNNNCTC 2 cut(s) 1109, 1141
BpmI CTGGAG 1 cut(s) 1538
Bpu10I CCTNAGC 1 cut(s) 374
BpuEI CTTGAG 2 cut(s) 12, 581
BpuMI CCSGG 1 cut(s) 582
Bsa29I ATCGAT 1 cut(s) 426
BsaAI YACGTR 1 cut(s) 969
BsaBI GATNNNNATC 1 cut(s) 438
BsaI GGTCTC 1 cut(s) 1338
BsaJI CCNNGG 6 cut(s) 653, 908, 1032, 1113, 1326, 1574
Bsc4I CCNNNNNNNGG 3 cut(s) 99, 271, 1301
Bse118I RCCGGY 1 cut(s) 1301
Bse3DI GCAATG 3 cut(s) 543, 1134, 1166
Bse8I GATNNNNATC 1 cut(s) 438
BseBI CCWGG 3 cut(s) 471, 689, 1576
BseCI ATCGAT 1 cut(s) 426
BseDI CCNNGG 6 cut(s) 653, 908, 1032, 1113, 1326, 1574
BseGI GGATG 4 cut(s) 280, 1256, 1401, 1540
BseJI GATNNNNATC 1 cut(s) 438
BseLI CCNNNNNNNGG 3 cut(s) 99, 271, 1301
BseMI GCAATG 3 cut(s) 543, 1134, 1166
BseMII CTCAG 1 cut(s) 1083
BseSI GKGCMC 2 cut(s) 1214, 1575
BseX3I CGGCCG 1 cut(s) 583
BseXI GCAGC 4 cut(s) 307, 357, 587, 1292
BseYI CCCAGC 1 cut(s) 92
Bsh1285I CGRYCG 1 cut(s) 586
BshFI GGCC 2 cut(s) 585, 1579
BshNI GGYRCC 1 cut(s) 1197
BshVI ATCGAT 1 cut(s) 426
BsiEI CGRYCG 1 cut(s) 586
BsiHKAI GWGCWC 3 cut(s) 706, 996, 1214
BsiHKCI CYCGRG 1 cut(s) 652
BsiSI CCGG 3 cut(s) 582, 1260, 1302
BslFI GGGAC 1 cut(s) 1260
BslI CCNNNNNNNGG 3 cut(s) 99, 271, 1301
BsmAI GTCTC 4 cut(s) 728, 1338, 1381, 1601
BsmFI GGGAC 1 cut(s) 1260
BsmI GAATGC 1 cut(s) 1087
BsnI GGCC 2 cut(s) 585, 1579
Bso31I GGTCTC 1 cut(s) 1338
BsoBI CYCGRG 1 cut(s) 652
Bsp1286I GDGCHC 5 cut(s) 706, 894, 996, 1214, 1575
Bsp143I GATC 5 cut(s) 4, 529, 844, 1021, 1497
Bsp19I CCATGG 1 cut(s) 1032
BspACI CCGC 1 cut(s) 209
BspANI GGCC 2 cut(s) 585, 1579
BspCNI CTCAG 1 cut(s) 1084
BspDI ATCGAT 1 cut(s) 426
BspLI GGNNCC 2 cut(s) 6, 1199
BspMAI CTGCAG 2 cut(s) 61, 571
BspMI ACCTGC 1 cut(s) 1708
BspPI GGATC 3 cut(s) 12, 852, 1029
BspT107I GGYRCC 1 cut(s) 1197
BspTI CTTAAG 2 cut(s) 443, 1667
BspTNI GGTCTC 1 cut(s) 1338
BsrDI GCAATG 3 cut(s) 543, 1134, 1166
BsrFI RCCGGY 1 cut(s) 1301
BssAI RCCGGY 1 cut(s) 1301
BssECI CCNNGG 6 cut(s) 653, 908, 1032, 1113, 1326, 1574
BssMI GATC 5 cut(s) 4, 529, 844, 1021, 1497
BssT1I CCWWGG 3 cut(s) 1032, 1113, 1326
Bst2UI CCWGG 3 cut(s) 471, 689, 1576
Bst4CI ACNGT 5 cut(s) 352, 701, 834, 1570, 1587
Bst6I CTCTTC 1 cut(s) 182
BstAFI CTTAAG 2 cut(s) 443, 1667
BstBAI YACGTR 1 cut(s) 969
BstC8I GCNNGC 2 cut(s) 1110, 1419
BstDEI CTNAG 6 cut(s) 200, 374, 479, 503, 782, 1092
BstDSI CCRYGG 1 cut(s) 1032
BstF5I GGATG 4 cut(s) 280, 1256, 1401, 1540
BstH2I RGCGCY 2 cut(s) 250, 1496
BstHHI GCGC 3 cut(s) 249, 1423, 1495
BstKTI GATC 5 cut(s) 7, 532, 847, 1024, 1500
BstMAI GTCTC 4 cut(s) 728, 1338, 1381, 1601
BstMBI GATC 5 cut(s) 4, 529, 844, 1021, 1497
BstMCI CGRYCG 1 cut(s) 586
BstMWI GCNNNNNNNGC 5 cut(s) 29, 376, 575, 591, 1109
BstNI CCWGG 3 cut(s) 471, 689, 1576
BstNSI RCATGY 3 cut(s) 412, 1267, 1421
BstSCI CCNGG 4 cut(s) 469, 580, 687, 1574
BstSFI CTRYAG 2 cut(s) 57, 567
BstSLI GKGCMC 2 cut(s) 1214, 1575
BstSNI TACGTA 1 cut(s) 969
BstV1I GCAGC 4 cut(s) 307, 357, 587, 1292
BstV2I GAAGAC 1 cut(s) 896
BstX2I RGATCY 2 cut(s) 4, 1021
BstYI RGATCY 2 cut(s) 4, 1021
BstZI CGGCCG 1 cut(s) 583
Bsu15I ATCGAT 1 cut(s) 426
BsuI GTATCC 1 cut(s) 776
BsuRI GGCC 2 cut(s) 585, 1579
BsuTUI ATCGAT 1 cut(s) 426
BtgI CCRYGG 1 cut(s) 1032
BtsCI GGATG 4 cut(s) 280, 1256, 1401, 1540
BtsI GCAGTG 4 cut(s) 54, 576, 1040, 1080
BtsIMutI CAGTG 7 cut(s) 54, 348, 576, 706, 1040, 1080, 1089
BveI ACCTGC 1 cut(s) 1708
Cac8I GCNNGC 2 cut(s) 1110, 1419
CfoI GCGC 3 cut(s) 249, 1423, 1495
Cfr10I RCCGGY 1 cut(s) 1301
ClaI ATCGAT 1 cut(s) 426
CseI GACGC 2 cut(s) 445, 1532
Csp6I GTAC 2 cut(s) 467, 1198
CspCI CAANNNNNGTGG 2 cut(s) 541, 576
CviQI GTAC 2 cut(s) 467, 1198
DdeI CTNAG 6 cut(s) 200, 374, 479, 503, 782, 1092
DpnI GATC 5 cut(s) 6, 531, 846, 1023, 1499
DpnII GATC 5 cut(s) 4, 529, 844, 1021, 1497
DraIII CACNNNGTG 1 cut(s) 798
DrdI GACNNNNNNGTC 1 cut(s) 161
DseDI GACNNNNNNGTC 1 cut(s) 161
EaeI YGGCCR 1 cut(s) 583
EagI CGGCCG 1 cut(s) 583
Eam1104I CTCTTC 1 cut(s) 182
EarI CTCTTC 1 cut(s) 182
EciI GGCGGA 1 cut(s) 198
Ecl136II GAGCTC 1 cut(s) 994
EclXI CGGCCG 1 cut(s) 583
Eco105I TACGTA 1 cut(s) 969
Eco130I CCWWGG 3 cut(s) 1032, 1113, 1326
Eco24I GRGCYC 2 cut(s) 894, 996
Eco31I GGTCTC 1 cut(s) 1338
Eco47III AGCGCT 2 cut(s) 248, 1494
Eco52I CGGCCG 1 cut(s) 583
Eco53kI GAGCTC 1 cut(s) 994
Eco57I CTGAAG 3 cut(s) 194, 312, 1023
Eco88I CYCGRG 1 cut(s) 652
EcoICRI GAGCTC 1 cut(s) 994
EcoRII CCWGG 3 cut(s) 469, 687, 1574
EcoT14I CCWWGG 3 cut(s) 1032, 1113, 1326
EcoT22I ATGCAT 1 cut(s) 127
EcoT38I GRGCYC 2 cut(s) 894, 996
ErhI CCWWGG 3 cut(s) 1032, 1113, 1326
FalI AAGNNNNNCTT 2 cut(s) 1092, 1124
FaqI GGGAC 1 cut(s) 1260
FauNDI CATATG 1 cut(s) 121
Fnu4HI GCNGC 4 cut(s) 296, 371, 576, 1281
FokI GGATG 4 cut(s) 287, 1243, 1388, 1547
FriOI GRGCYC 2 cut(s) 894, 996
Fsp4HI GCNGC 4 cut(s) 296, 371, 576, 1281
FspBI CTAG 5 cut(s) 527, 666, 681, 989, 1166
FspI TGCGCA 1 cut(s) 1422
GlaI GCGC 3 cut(s) 248, 1422, 1494
GluI GCNGC 4 cut(s) 296, 371, 576, 1281
GsaI CCCAGC 1 cut(s) 96
GsuI CTGGAG 1 cut(s) 1538
HaeII RGCGCY 2 cut(s) 250, 1496
HaeIII GGCC 2 cut(s) 585, 1579
HapII CCGG 3 cut(s) 582, 1260, 1302
HgaI GACGC 2 cut(s) 445, 1532
HhaI GCGC 3 cut(s) 249, 1423, 1495
Hin6I GCGC 3 cut(s) 247, 1421, 1493
HinP1I GCGC 3 cut(s) 247, 1421, 1493
HinfI GANTC 8 cut(s) 280, 439, 449, 563, 879, 1037, 1322, 1331
HpaII CCGG 3 cut(s) 582, 1260, 1302
HphI GGTGA 2 cut(s) 275, 1316
Hpy166II GTNNAC 3 cut(s) 823, 1212, 1540
Hpy188I TCNGA 7 cut(s) 331, 774, 909, 1014, 1343, 1395, 1406
Hpy188III TCNNGA 3 cut(s) 560, 640, 727
Hpy8I GTNNAC 3 cut(s) 823, 1212, 1540
Hpy99I CGWCG 3 cut(s) 75, 461, 1640
HpyAV CCTTC 9 cut(s) 169, 222, 353, 377, 553, 799, 1145, 1177, 1525
HpyCH4III ACNGT 5 cut(s) 352, 701, 834, 1570, 1587
HpyCH4IV ACGT 5 cut(s) 73, 160, 361, 465, 968
HpyCH4V TGCA 8 cut(s) 59, 125, 295, 569, 737, 839, 924, 1212
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 376, 575, 591, 1109
HpyF3I CTNAG 6 cut(s) 200, 374, 479, 503, 782, 1092
HpySE526I ACGT 5 cut(s) 73, 160, 361, 465, 968
HspAI GCGC 3 cut(s) 247, 1421, 1493
KpnI GGTACC 1 cut(s) 1201
Kzo9I GATC 5 cut(s) 4, 529, 844, 1021, 1497
LmnI GCTCC 3 cut(s) 709, 1557, 1708
Lsp1109I GCAGC 4 cut(s) 307, 357, 587, 1292
LweI GCATC 2 cut(s) 32, 134
MaeI CTAG 5 cut(s) 527, 666, 681, 989, 1166
MaeII ACGT 5 cut(s) 73, 160, 361, 465, 968
MaeIII GTNAC 4 cut(s) 258, 860, 1477, 1612
MalI GATC 5 cut(s) 6, 531, 846, 1023, 1499
MboI GATC 5 cut(s) 4, 529, 844, 1021, 1497
MboII GAAGA 8 cut(s) 191, 199, 318, 530, 896, 1496, 1499, 1595
MflI RGATCY 2 cut(s) 4, 1021
MhlI GDGCHC 5 cut(s) 706, 894, 996, 1214, 1575
MluCI AATT 8 cut(s) 82, 287, 300, 751, 927, 1059, 1308, 1359
MlyI GAGTC 2 cut(s) 572, 888
MmeI TCCRAC 2 cut(s) 723, 792
Mph1103I ATGCAT 1 cut(s) 127
MroXI GAANNNNTTC 2 cut(s) 111, 1008
MseI TTAA 5 cut(s) 390, 444, 590, 750, 1668
MslI CAYNNNNRTG 3 cut(s) 1241, 1416, 1568
MspCI CTTAAG 2 cut(s) 443, 1667
MspI CCGG 3 cut(s) 582, 1260, 1302
MspR9I CCNGG 4 cut(s) 471, 582, 689, 1576
Mva1269I GAATGC 1 cut(s) 1087
MvaI CCWGG 3 cut(s) 471, 689, 1576
MwoI GCNNNNNNNGC 5 cut(s) 29, 376, 575, 591, 1109
NciI CCSGG 1 cut(s) 582
NcoI CCATGG 1 cut(s) 1032
NdeI CATATG 1 cut(s) 121
NdeII GATC 5 cut(s) 4, 529, 844, 1021, 1497
NlaIV GGNNCC 2 cut(s) 6, 1199
NmeAIII GCCGAG 1 cut(s) 1129
NmuCI GTSAC 1 cut(s) 258
NsbI TGCGCA 1 cut(s) 1422
NsiI ATGCAT 1 cut(s) 127
NspI RCATGY 3 cut(s) 412, 1267, 1421
OliI CACNNNNGTG 1 cut(s) 1568
PaeI GCATGC 1 cut(s) 1421
PciI ACATGT 1 cut(s) 408
PctI GAATGC 1 cut(s) 1087
PdmI GAANNNNTTC 2 cut(s) 111, 1008
PfeI GAWTC 6 cut(s) 280, 439, 449, 1037, 1322, 1331
PflMI CCANNNNNTGG 1 cut(s) 99
PkrI GCNGC 4 cut(s) 297, 372, 577, 1282
PleI GAGTC 2 cut(s) 571, 887
PpsI GAGTC 2 cut(s) 571, 887
Ppu21I YACGTR 1 cut(s) 969
PscI ACATGT 1 cut(s) 408
Psp124BI GAGCTC 1 cut(s) 996
Psp6I CCWGG 3 cut(s) 469, 687, 1574
PspFI CCCAGC 1 cut(s) 92
PspGI CCWGG 3 cut(s) 469, 687, 1574
PspN4I GGNNCC 2 cut(s) 6, 1199
PstI CTGCAG 2 cut(s) 61, 571
PsuI RGATCY 2 cut(s) 4, 1021
RsaI GTAC 2 cut(s) 468, 1199
RsaNI GTAC 2 cut(s) 467, 1198
RseI CAYNNNNRTG 3 cut(s) 1241, 1416, 1568
SacI GAGCTC 1 cut(s) 996
SaqAI TTAA 5 cut(s) 390, 444, 590, 750, 1668
SatI GCNGC 4 cut(s) 296, 371, 576, 1281
Sau3AI GATC 5 cut(s) 4, 529, 844, 1021, 1497
SchI GAGTC 2 cut(s) 572, 888
ScrFI CCNGG 4 cut(s) 471, 582, 689, 1576
SduI GDGCHC 5 cut(s) 706, 894, 996, 1214, 1575
SfaNI GCATC 2 cut(s) 32, 134
SfcI CTRYAG 2 cut(s) 57, 567
SmiMI CAYNNNNRTG 3 cut(s) 1241, 1416, 1568
SmlI CTYRAG 4 cut(s) 27, 443, 560, 1667
SmoI CTYRAG 4 cut(s) 27, 443, 560, 1667
SnaBI TACGTA 1 cut(s) 969
SphI GCATGC 1 cut(s) 1421
Sse9I AATT 8 cut(s) 82, 287, 300, 751, 927, 1059, 1308, 1359
SsiI CCGC 1 cut(s) 209
SspI AATATT 1 cut(s) 110
SspMI CTAG 5 cut(s) 527, 666, 681, 989, 1166
SstI GAGCTC 1 cut(s) 996
StyD4I CCNGG 4 cut(s) 469, 580, 687, 1574
StyI CCWWGG 3 cut(s) 1032, 1113, 1326
TaaI ACNGT 5 cut(s) 352, 701, 834, 1570, 1587
TaiI ACGT 5 cut(s) 76, 163, 364, 468, 971
TaqI TCGA 7 cut(s) 426, 532, 847, 963, 1313, 1500, 1695
TasI AATT 8 cut(s) 82, 287, 300, 751, 927, 1059, 1308, 1359
TfiI GAWTC 6 cut(s) 280, 439, 449, 1037, 1322, 1331
Tru1I TTAA 5 cut(s) 390, 444, 590, 750, 1668
Tru9I TTAA 5 cut(s) 390, 444, 590, 750, 1668
TscAI CASTG 7 cut(s) 61, 355, 576, 706, 1047, 1080, 1096
TseFI GTSAC 1 cut(s) 258
TseI GCWGC 4 cut(s) 295, 370, 575, 1280
Tsp45I GTSAC 1 cut(s) 258
TspDTI ATGAA 8 cut(s) 390, 412, 504, 999, 1070, 1196, 1245, 1478
TspRI CASTG 7 cut(s) 61, 355, 576, 706, 1047, 1080, 1096
Van91I CCANNNNNTGG 1 cut(s) 99
Vha464I CTTAAG 2 cut(s) 443, 1667
VneI GTGCAC 1 cut(s) 1210
XapI RAATTY 4 cut(s) 82, 300, 927, 1308
XceI RCATGY 3 cut(s) 412, 1267, 1421
XmnI GAANNNNTTC 2 cut(s) 111, 1008
XspI CTAG 5 cut(s) 527, 666, 681, 989, 1166
Zsp2I ATGCAT 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.