Prupe.4G199300_v2.0.a1

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Forward (+)
12290148 .. 12292094
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G199300.1

Sequence Viewer

Length: 1374 bp
ATGATTTTGTCAAATCAGATGAAACTAATTGATGCAATCCAGCGCCTCGGCGTGGCGTACCACTTCGAAAAGGAAATAGAAGAAGCACTGGAACATATATATGCTGCAAATCATTTCCATGATGATGATGGTGATGGTGACCTATACAATGTTTCCCTCGGAATATTCAACAAGTTCAAAGATAGTAAAAATGGAGGCTTCAAGGAAAGCTTAATCGCTGATGTGCTGGGAATGCTAAGCTTTTATGAAGCAACGCATCTGAGGGTGCATGGAGAAGATATACTAGAAGAGGCTCTTATTTTCACGACAAAACATCTGGAGTCGGCAACAACCCATGTAAGCTATCAACTGGCAGAACAAATAGCTCAAGCCCTAAAGAGACCTCTCCGAAAGAGTCTCGAGAGGTTATGCGCCCGTCGGTTCATGTCCATCTACCAAGATGAAGCTTCACATAATGAAGCTCTATTAAAACTTGCCAAGTCAGATTTCAATCTTGTTCAGTCTTTGCATAAACAGGAGCTCAGTGAGATTATTAGGTGGTGGAAAGAACTAGACTTTGGAAGGAAGCTGCCTTTTGCAAGAAACAGAATTGTGGAGTTATACTGCTCGATTTTGGGGGTCTATTTTGAGCCCCAATACCTTGTTGGAAGAAAATTTGTCACAAAAATTATTGCCCTGATGTCTGTAATGGATGATATCTACCACGCGTTCGGTACATTTGAAGAACTTGAGATCTTTACCGAAGCAATTCATCAAAGATGGCATGCCAATTGCATGGATGGAGTGCCAGACTACATGCAAATATTCTTCCATACGCTTTTGAATGTTTGGAAAACTATTACCAAAGCTTACTTTGATGAGGCCAAATGGTTCCACGAAGGATGCATCCCAAGCATGGAGGAGTATATGCGTGTTGCTGCAACTTCTGCTGCTAGCTTCGCACTTTCAGCTACATCTTTAGTTGGCATGGGAGATATTGTAACCAAGGAGTCCTTTGAGTGGTTGTTCAATGACCCTAAAATTCTTAAAGCTTCCAATATCATTGTTAGGCTCATGGATGACATCGTTTCAAGCAAGTTTGAAAAAGAGAGGGGCCATGTTGCTTGTGCTATTGATTGTTACATGAAGCAATATGGGGTCTCAGATGAGCAAGAGATAATTGATGTCTTCAACAAACAAATTGTGGATTCGTGGAAGGATATCAACGAGGAGTTCCTTAGACCAACTTCTATGCCGATGCCTATCCTTGAACGTATTGTTAATTTAACAAGAGTGGTGGATCTCCTCTACAAAAAATATGATGCATACACACATGGTGGAAAAGTGATGAACGATTGCATCGCTTCGTATTTGATTGATCCGGCACCAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

458

Amino Acids

52.76

Weight (kDa)

5.43

Isoelectric Point (pI)

44.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1363
AccII CGCG 1 cut(s) 707
AclWI GGATC 2 cut(s) 1287, 1352
AcsI RAATTY 2 cut(s) 653, 1020
AdeI CACNNNGTG 1 cut(s) 1316
AfaI GTAC 2 cut(s) 59, 715
AfiI CCNNNNNNNGG 3 cut(s) 52, 895, 999
AflIII ACRYGT 1 cut(s) 705
AjuI GAANNNNNNNTTGG 4 cut(s) 470, 502, 540, 572
Alw21I GWGCWC 1 cut(s) 522
Alw26I GTCTC 3 cut(s) 373, 401, 1144
AlwI GGATC 2 cut(s) 1287, 1352
Ama87I CYCGRG 1 cut(s) 398
AoxI GGCC 2 cut(s) 861, 1093
ApeKI GCWGC 4 cut(s) 104, 568, 917, 929
ApoI RAATTY 2 cut(s) 653, 1020
Asp700I GAANNNNTTC 1 cut(s) 747
AspLEI GCGC 2 cut(s) 45, 413
AspS9I GGNCC 1 cut(s) 1093
AsuHPI GGTGA 2 cut(s) 143, 149
AsuII TTCGAA 1 cut(s) 66
AsuNHI GCTAGC 1 cut(s) 932
AvaI CYCGRG 1 cut(s) 398
BanI GGYRCC 1 cut(s) 1363
BanII GRGCYC 2 cut(s) 522, 633
BbsI GAAGAC 1 cut(s) 1159
Bbv12I GWGCWC 1 cut(s) 522
BbvI GCAGC 4 cut(s) 91, 555, 904, 916
BccI CCATC 5 cut(s) 122, 128, 437, 753, 773
BcoDI GTCTC 3 cut(s) 373, 401, 1144
BfaI CTAG 3 cut(s) 284, 551, 933
BfoI RGCGCY 1 cut(s) 46
BglII AGATCT 1 cut(s) 732
BisI GCNGC 4 cut(s) 105, 569, 918, 930
BlpI GCTNAGC 1 cut(s) 236
BlsI GCNGC 4 cut(s) 106, 570, 919, 931
BmeT110I CYCGRG 1 cut(s) 398
BmgT120I GGNCC 1 cut(s) 1093
BmiI GGNNCC 3 cut(s) 872, 1094, 1365
BmsI GCATC 7 cut(s) 22, 265, 872, 894, 1227, 1291, 1347
BmtI GCTAGC 1 cut(s) 936
BpiI GAAGAC 1 cut(s) 1159
BpmI CTGGAG 1 cut(s) 338
Bpu1102I GCTNAGC 1 cut(s) 236
Bpu14I TTCGAA 1 cut(s) 66
BpuEI CTTGAG 2 cut(s) 351, 749
BsaBI GATNNNNATC 2 cut(s) 489, 1241
BsaI GGTCTC 2 cut(s) 373, 1144
BsaJI CCNNGG 3 cut(s) 46, 157, 984
BsaXI ACNNNNNCTCC 2 cut(s) 963, 993
Bsc4I CCNNNNNNNGG 3 cut(s) 52, 895, 999
Bse1I ACTGG 3 cut(s) 93, 354, 1367
Bse8I GATNNNNATC 2 cut(s) 489, 1241
BseDI CCNNGG 3 cut(s) 46, 157, 984
BseGI GGATG 5 cut(s) 697, 784, 885, 887, 1063
BseJI GATNNNNATC 2 cut(s) 489, 1241
BseLI CCNNNNNNNGG 3 cut(s) 52, 895, 999
BseMII CTCAG 3 cut(s) 251, 535, 1155
BseNI ACTGG 3 cut(s) 93, 354, 1367
BseRI GAGGAG 3 cut(s) 914, 1223, 1274
BseXI GCAGC 4 cut(s) 91, 555, 904, 916
BseYI CCCAGC 1 cut(s) 226
Bsh1236I CGCG 1 cut(s) 707
BshFI GGCC 2 cut(s) 863, 1095
BshNI GGYRCC 1 cut(s) 1363
BsiHKAI GWGCWC 1 cut(s) 522
BsiHKCI CYCGRG 1 cut(s) 398
BsiSI CCGG 1 cut(s) 1361
BslI CCNNNNNNNGG 3 cut(s) 52, 895, 999
BsmAI GTCTC 3 cut(s) 373, 401, 1144
BsmI GAATGC 1 cut(s) 237
BsnI GGCC 2 cut(s) 863, 1095
Bso31I GGTCTC 2 cut(s) 373, 1144
BsoBI CYCGRG 1 cut(s) 398
Bsp119I TTCGAA 1 cut(s) 66
Bsp1286I GDGCHC 2 cut(s) 522, 633
Bsp143I GATC 3 cut(s) 732, 1279, 1357
Bsp1720I GCTNAGC 1 cut(s) 236
BspANI GGCC 2 cut(s) 863, 1095
BspCNI CTCAG 3 cut(s) 252, 534, 1154
BspFNI CGCG 1 cut(s) 707
BspLI GGNNCC 3 cut(s) 872, 1094, 1365
BspOI GCTAGC 1 cut(s) 936
BspPI GGATC 2 cut(s) 1287, 1352
BspT104I TTCGAA 1 cut(s) 66
BspT107I GGYRCC 1 cut(s) 1363
BspTNI GGTCTC 2 cut(s) 373, 1144
BsrI ACTGG 3 cut(s) 93, 354, 1367
BssECI CCNNGG 3 cut(s) 46, 157, 984
BssMI GATC 3 cut(s) 732, 1279, 1357
BssT1I CCWWGG 1 cut(s) 984
Bst6I CTCTTC 1 cut(s) 282
BstAPI GCANNNNNTGC 1 cut(s) 926
BstBI TTCGAA 1 cut(s) 66
BstC8I GCNNGC 2 cut(s) 765, 934
BstDEI CTNAG 5 cut(s) 236, 260, 521, 1141, 1217
BstEII GGTNACC 1 cut(s) 137
BstF5I GGATG 5 cut(s) 697, 784, 885, 887, 1063
BstFNI CGCG 1 cut(s) 707
BstH2I RGCGCY 1 cut(s) 46
BstHHI GCGC 2 cut(s) 45, 413
BstKTI GATC 3 cut(s) 735, 1282, 1360
BstMAI GTCTC 3 cut(s) 373, 401, 1144
BstMBI GATC 3 cut(s) 732, 1279, 1357
BstMWI GCNNNNNNNGC 5 cut(s) 232, 891, 926, 938, 947
BstNSI RCATGY 2 cut(s) 767, 799
BstPI GGTNACC 1 cut(s) 137
BstUI CGCG 1 cut(s) 707
BstV1I GCAGC 4 cut(s) 91, 555, 904, 916
BstV2I GAAGAC 1 cut(s) 1159
BstX2I RGATCY 2 cut(s) 732, 1279
BstXI CCANNNNNNTGG 1 cut(s) 775
BstYI RGATCY 2 cut(s) 732, 1279
BsuRI GGCC 2 cut(s) 863, 1095
BtgZI GCGATG 1 cut(s) 1324
BtsCI GGATG 5 cut(s) 697, 784, 885, 887, 1063
BtsIMutI CAGTG 2 cut(s) 86, 529
Cac8I GCNNGC 2 cut(s) 765, 934
CfoI GCGC 2 cut(s) 45, 413
Cfr13I GGNCC 1 cut(s) 1093
Csp6I GTAC 2 cut(s) 58, 714
CspCI CAANNNNNGTGG 2 cut(s) 1257, 1292
CviQI GTAC 2 cut(s) 58, 714
DdeI CTNAG 5 cut(s) 236, 260, 521, 1141, 1217
DpnI GATC 3 cut(s) 734, 1281, 1359
DpnII GATC 3 cut(s) 732, 1279, 1357
DraIII CACNNNGTG 1 cut(s) 1316
Eam1104I CTCTTC 1 cut(s) 282
EarI CTCTTC 1 cut(s) 282
Ecl136II GAGCTC 1 cut(s) 520
Eco130I CCWWGG 1 cut(s) 984
Eco24I GRGCYC 2 cut(s) 522, 633
Eco31I GGTCTC 2 cut(s) 373, 1144
Eco32I GATATC 2 cut(s) 697, 1201
Eco53kI GAGCTC 1 cut(s) 520
Eco88I CYCGRG 1 cut(s) 398
Eco91I GGTNACC 1 cut(s) 137
EcoICRI GAGCTC 1 cut(s) 520
EcoO65I GGTNACC 1 cut(s) 137
EcoRV GATATC 2 cut(s) 697, 1201
EcoT14I CCWWGG 1 cut(s) 984
EcoT22I ATGCAT 2 cut(s) 887, 1306
EcoT38I GRGCYC 2 cut(s) 522, 633
ErhI CCWWGG 1 cut(s) 984
FalI AAGNNNNNCTT 6 cut(s) 194, 226, 279, 311, 977, 1009
Fnu4HI GCNGC 4 cut(s) 105, 569, 918, 930
FokI GGATG 5 cut(s) 704, 791, 872, 894, 1070
FriOI GRGCYC 2 cut(s) 522, 633
Fsp4HI GCNGC 4 cut(s) 105, 569, 918, 930
FspBI CTAG 3 cut(s) 284, 551, 933
GlaI GCGC 2 cut(s) 44, 412
GluI GCNGC 4 cut(s) 105, 569, 918, 930
GsaI CCCAGC 1 cut(s) 230
GsuI CTGGAG 1 cut(s) 338
HaeII RGCGCY 1 cut(s) 46
HaeIII GGCC 2 cut(s) 863, 1095
HapII CCGG 1 cut(s) 1361
HhaI GCGC 2 cut(s) 45, 413
Hin6I GCGC 2 cut(s) 43, 411
HinP1I GCGC 2 cut(s) 43, 411
HindIII AAGCTT 5 cut(s) 208, 238, 444, 846, 1029
HinfI GANTC 4 cut(s) 320, 394, 989, 1187
HpaII CCGG 1 cut(s) 1361
HphI GGTGA 2 cut(s) 143, 149
Hpy188I TCNGA 6 cut(s) 18, 161, 261, 389, 484, 1144
Hpy188III TCNNGA 4 cut(s) 304, 317, 398, 400
Hpy99I CGWCG 1 cut(s) 420
HpyAV CCTTC 3 cut(s) 555, 872, 1189
HpyCH4IV ACGT 1 cut(s) 1252
HpyF10VI GCNNNNNNNGC 5 cut(s) 232, 891, 926, 938, 947
HpyF3I CTNAG 5 cut(s) 236, 260, 521, 1141, 1217
HpySE526I ACGT 1 cut(s) 1252
HspAI GCGC 2 cut(s) 43, 411
Kzo9I GATC 3 cut(s) 732, 1279, 1357
LmnI GCTCC 1 cut(s) 517
LpnPI CCDG 8 cut(s) 53, 74, 212, 302, 335, 500, 689, 801
Lsp1109I GCAGC 4 cut(s) 91, 555, 904, 916
LweI GCATC 7 cut(s) 22, 265, 872, 894, 1227, 1291, 1347
MaeI CTAG 3 cut(s) 284, 551, 933
MaeII ACGT 1 cut(s) 1252
MaeIII GTNAC 4 cut(s) 137, 658, 979, 1118
MalI GATC 3 cut(s) 734, 1281, 1359
MboI GATC 3 cut(s) 732, 1279, 1357
MboII GAAGA 7 cut(s) 92, 287, 299, 660, 734, 799, 1159
MfeI CAATTG 1 cut(s) 769
MflI RGATCY 2 cut(s) 732, 1279
MhlI GDGCHC 2 cut(s) 522, 633
MluI ACGCGT 1 cut(s) 705
MlyI GAGTC 3 cut(s) 329, 403, 998
MmeI TCCRAC 1 cut(s) 625
Mph1103I ATGCAT 2 cut(s) 887, 1306
MroXI GAANNNNTTC 1 cut(s) 747
MseI TTAA 5 cut(s) 212, 467, 1026, 1260, 1265
MslI CAYNNNNRTG 4 cut(s) 99, 117, 123, 1369
MspI CCGG 1 cut(s) 1361
MunI CAATTG 1 cut(s) 769
Mva1269I GAATGC 1 cut(s) 237
MvnI CGCG 1 cut(s) 707
MwoI GCNNNNNNNGC 5 cut(s) 232, 891, 926, 938, 947
NdeII GATC 3 cut(s) 732, 1279, 1357
NheI GCTAGC 1 cut(s) 932
NlaIV GGNNCC 3 cut(s) 872, 1094, 1365
NmeAIII GCCGAG 1 cut(s) 27
NmuCI GTSAC 2 cut(s) 137, 658
NsiI ATGCAT 2 cut(s) 887, 1306
NspI RCATGY 2 cut(s) 767, 799
NspV TTCGAA 1 cut(s) 66
PaeI GCATGC 1 cut(s) 767
PaeR7I CTCGAG 1 cut(s) 398
PctI GAATGC 1 cut(s) 237
PdmI GAANNNNTTC 1 cut(s) 747
PfeI GAWTC 1 cut(s) 1187
PkrI GCNGC 4 cut(s) 106, 570, 919, 931
PleI GAGTC 3 cut(s) 328, 402, 997
PpsI GAGTC 3 cut(s) 328, 402, 997
Psp124BI GAGCTC 1 cut(s) 522
PspEI GGTNACC 1 cut(s) 137
PspFI CCCAGC 1 cut(s) 226
PspN4I GGNNCC 3 cut(s) 872, 1094, 1365
PspPI GGNCC 1 cut(s) 1093
PsuI RGATCY 2 cut(s) 732, 1279
RsaI GTAC 2 cut(s) 59, 715
RsaNI GTAC 2 cut(s) 58, 714
RseI CAYNNNNRTG 4 cut(s) 99, 117, 123, 1369
SacI GAGCTC 1 cut(s) 522
SaqAI TTAA 5 cut(s) 212, 467, 1026, 1260, 1265
SatI GCNGC 4 cut(s) 105, 569, 918, 930
Sau3AI GATC 3 cut(s) 732, 1279, 1357
Sau96I GGNCC 1 cut(s) 1093
SchI GAGTC 3 cut(s) 329, 403, 998
SduI GDGCHC 2 cut(s) 522, 633
SfaNI GCATC 7 cut(s) 22, 265, 872, 894, 1227, 1291, 1347
Sfr274I CTCGAG 1 cut(s) 398
SfuI TTCGAA 1 cut(s) 66
SlaI CTCGAG 1 cut(s) 398
SmiMI CAYNNNNRTG 4 cut(s) 99, 117, 123, 1369
SmlI CTYRAG 3 cut(s) 366, 398, 728
SmoI CTYRAG 3 cut(s) 366, 398, 728
SphI GCATGC 1 cut(s) 767
SspI AATATT 2 cut(s) 165, 804
SspMI CTAG 3 cut(s) 284, 551, 933
SstI GAGCTC 1 cut(s) 522
StyI CCWWGG 1 cut(s) 984
TaiI ACGT 1 cut(s) 1255
TaqI TCGA 3 cut(s) 66, 399, 608
TfiI GAWTC 1 cut(s) 1187
Tru1I TTAA 5 cut(s) 212, 467, 1026, 1260, 1265
Tru9I TTAA 5 cut(s) 212, 467, 1026, 1260, 1265
TscAI CASTG 2 cut(s) 93, 529
TseFI GTSAC 2 cut(s) 137, 658
TseI GCWGC 4 cut(s) 104, 568, 917, 929
Tsp45I GTSAC 2 cut(s) 137, 658
TspDTI ATGAA 8 cut(s) 35, 261, 412, 456, 471, 740, 1139, 1343
TspRI CASTG 2 cut(s) 93, 529
XapI RAATTY 2 cut(s) 653, 1020
XceI RCATGY 2 cut(s) 767, 799
XcmI CCANNNNNNNNNTGG 2 cut(s) 125, 641
XhoI CTCGAG 1 cut(s) 398
XmnI GAANNNNTTC 1 cut(s) 747
XspI CTAG 3 cut(s) 284, 551, 933
Zsp2I ATGCAT 2 cut(s) 887, 1306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.