synthase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Terpene_synth | PF01397 | 23 - 82 | 3.5e-18 | Terpene synthase, N-terminal domain |
| Terpene_synth_C | PF03936 | 112 - 350 | 8.4e-92 | Terpene synthase family, metal binding domain |
| Terpene_syn_C_2 | PF19086 | 153 - 350 | 7.4e-57 | Terpene synthase family 2, C-terminal metal binding |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 852 |
| AccBSI | CCGCTC | 1 cut(s) | 215 |
| AccI | GTMKAC | 1 cut(s) | 411 |
| AciI | CCGC | 5 cut(s) | 213, 238, 421, 661, 770 |
| AclI | AACGTT | 1 cut(s) | 775 |
| AclWI | GGATC | 1 cut(s) | 1202 |
| AcsI | RAATTY | 1 cut(s) | 610 |
| AcuI | CTGAAG | 2 cut(s) | 262, 552 |
| AfaI | GTAC | 3 cut(s) | 129, 740, 1157 |
| AfeI | AGCGCT | 1 cut(s) | 62 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 396, 852 |
| AflIII | ACRYGT | 1 cut(s) | 160 |
| AgsI | TTSAA | 6 cut(s) | 85, 610, 629, 695, 730, 1111 |
| AjnI | CCWGG | 3 cut(s) | 339, 437, 711 |
| AluBI | AGCT | 6 cut(s) | 358, 458, 525, 536, 704, 1018 |
| AluI | AGCT | 6 cut(s) | 358, 458, 525, 536, 704, 1018 |
| Alw21I | GWGCWC | 1 cut(s) | 1179 |
| Alw26I | GTCTC | 2 cut(s) | 258, 366 |
| AlwI | GGATC | 1 cut(s) | 1202 |
| Ama87I | CYCGRG | 2 cut(s) | 173, 221 |
| Aor51HI | AGCGCT | 1 cut(s) | 62 |
| AoxI | GGCC | 6 cut(s) | 23, 133, 387, 882, 922, 1088 |
| ApeKI | GCWGC | 3 cut(s) | 230, 458, 461 |
| ApoI | RAATTY | 1 cut(s) | 610 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 329, 361 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 614 |
| AspA2I | CCTAGG | 1 cut(s) | 1085 |
| AspLEI | GCGC | 1 cut(s) | 63 |
| AspS9I | GGNCC | 2 cut(s) | 337, 1089 |
| AsuHPI | GGTGA | 2 cut(s) | 199, 610 |
| AvaI | CYCGRG | 2 cut(s) | 173, 221 |
| AvaII | GGWCC | 1 cut(s) | 337 |
| AvrII | CCTAGG | 1 cut(s) | 1085 |
| Bbv12I | GWGCWC | 1 cut(s) | 1179 |
| BbvI | GCAGC | 3 cut(s) | 242, 445, 448 |
| BccI | CCATC | 4 cut(s) | 89, 436, 754, 787 |
| BceAI | ACGGC | 1 cut(s) | 947 |
| BciT130I | CCWGG | 3 cut(s) | 341, 439, 713 |
| BclI | TGATCA | 1 cut(s) | 565 |
| BcoDI | GTCTC | 2 cut(s) | 258, 366 |
| BfaI | CTAG | 4 cut(s) | 518, 638, 1086, 1125 |
| BfmI | CTRYAG | 1 cut(s) | 228 |
| BfoI | RGCGCY | 1 cut(s) | 64 |
| BisI | GCNGC | 3 cut(s) | 231, 459, 462 |
| BlnI | CCTAGG | 1 cut(s) | 1085 |
| BlsI | GCNGC | 3 cut(s) | 232, 460, 463 |
| Bme1390I | CCNGG | 3 cut(s) | 341, 439, 713 |
| Bme18I | GGWCC | 1 cut(s) | 337 |
| BmeT110I | CYCGRG | 2 cut(s) | 173, 221 |
| BmgT120I | GGNCC | 2 cut(s) | 337, 1089 |
| BmiI | GGNNCC | 2 cut(s) | 12, 1091 |
| BmrFI | CCNGG | 3 cut(s) | 341, 439, 713 |
| BmsI | GCATC | 3 cut(s) | 159, 965, 1060 |
| BpuEI | CTTGAG | 1 cut(s) | 1163 |
| Bsa29I | ATCGAT | 1 cut(s) | 1206 |
| BsaJI | CCNNGG | 3 cut(s) | 846, 963, 1085 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 816, 846 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 396, 852 |
| Bse1I | ACTGG | 1 cut(s) | 276 |
| Bse3DI | GCAATG | 1 cut(s) | 951 |
| BseBI | CCWGG | 3 cut(s) | 341, 439, 713 |
| BseCI | ATCGAT | 1 cut(s) | 1206 |
| BseDI | CCNNGG | 3 cut(s) | 846, 963, 1085 |
| BseGI | GGATG | 2 cut(s) | 447, 782 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 396, 852 |
| BseMI | GCAATG | 1 cut(s) | 951 |
| BseNI | ACTGG | 1 cut(s) | 276 |
| BseXI | GCAGC | 3 cut(s) | 242, 445, 448 |
| BshFI | GGCC | 6 cut(s) | 25, 135, 389, 884, 924, 1090 |
| BshVI | ATCGAT | 1 cut(s) | 1206 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1179 |
| BsiHKCI | CYCGRG | 2 cut(s) | 173, 221 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 396, 852 |
| BsmAI | GTCTC | 2 cut(s) | 258, 366 |
| BsmBI | CGTCTC | 1 cut(s) | 258 |
| BsmI | GAATGC | 1 cut(s) | 974 |
| BsnI | GGCC | 6 cut(s) | 25, 135, 389, 884, 924, 1090 |
| BsoBI | CYCGRG | 2 cut(s) | 173, 221 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1179 |
| Bsp1407I | TGTACA | 1 cut(s) | 1155 |
| Bsp143I | GATC | 2 cut(s) | 565, 1207 |
| Bsp19I | CCATGG | 1 cut(s) | 846 |
| BspACI | CCGC | 5 cut(s) | 213, 238, 421, 661, 770 |
| BspANI | GGCC | 6 cut(s) | 25, 135, 389, 884, 924, 1090 |
| BspDI | ATCGAT | 1 cut(s) | 1206 |
| BspHI | TCATGA | 1 cut(s) | 906 |
| BspLI | GGNNCC | 2 cut(s) | 12, 1091 |
| BspMAI | CTGCAG | 1 cut(s) | 232 |
| BspPI | GGATC | 1 cut(s) | 1202 |
| BsrBI | CCGCTC | 1 cut(s) | 215 |
| BsrDI | GCAATG | 1 cut(s) | 951 |
| BsrGI | TGTACA | 1 cut(s) | 1155 |
| BsrI | ACTGG | 1 cut(s) | 276 |
| BssECI | CCNNGG | 3 cut(s) | 846, 963, 1085 |
| BssMI | GATC | 2 cut(s) | 565, 1207 |
| BssT1I | CCWWGG | 2 cut(s) | 846, 1085 |
| Bst2UI | CCWGG | 3 cut(s) | 341, 439, 713 |
| Bst4CI | ACNGT | 2 cut(s) | 475, 805 |
| Bst6I | CTCTTC | 2 cut(s) | 750, 1053 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 458 |
| BstAUI | TGTACA | 1 cut(s) | 1155 |
| BstDEI | CTNAG | 3 cut(s) | 64, 311, 870 |
| BstDSI | CCRYGG | 2 cut(s) | 846, 963 |
| BstF5I | GGATG | 2 cut(s) | 447, 782 |
| BstH2I | RGCGCY | 1 cut(s) | 64 |
| BstHHI | GCGC | 1 cut(s) | 63 |
| BstKTI | GATC | 2 cut(s) | 568, 1210 |
| BstMAI | GTCTC | 2 cut(s) | 258, 366 |
| BstMBI | GATC | 2 cut(s) | 565, 1207 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 458, 680 |
| BstNI | CCWGG | 3 cut(s) | 341, 439, 713 |
| BstNSI | RCATGY | 1 cut(s) | 164 |
| BstSCI | CCNGG | 3 cut(s) | 339, 437, 711 |
| BstSFI | CTRYAG | 1 cut(s) | 228 |
| BstV1I | GCAGC | 3 cut(s) | 242, 445, 448 |
| Bsu15I | ATCGAT | 1 cut(s) | 1206 |
| BsuRI | GGCC | 6 cut(s) | 25, 135, 389, 884, 924, 1090 |
| BsuTUI | ATCGAT | 1 cut(s) | 1206 |
| BtgI | CCRYGG | 2 cut(s) | 846, 963 |
| BtsCI | GGATG | 2 cut(s) | 447, 782 |
| BtsIMutI | CAGTG | 2 cut(s) | 810, 868 |
| CciI | TCATGA | 1 cut(s) | 906 |
| CfoI | GCGC | 1 cut(s) | 63 |
| Cfr13I | GGNCC | 2 cut(s) | 337, 1089 |
| ClaI | ATCGAT | 1 cut(s) | 1206 |
| CseI | GACGC | 1 cut(s) | 1046 |
| Csp6I | GTAC | 3 cut(s) | 128, 739, 1156 |
| CviAII | CATG | 6 cut(s) | 161, 500, 847, 907, 976, 1041 |
| CviQI | GTAC | 3 cut(s) | 128, 739, 1156 |
| DdeI | CTNAG | 3 cut(s) | 64, 311, 870 |
| DpnI | GATC | 2 cut(s) | 567, 1209 |
| DpnII | GATC | 2 cut(s) | 565, 1207 |
| DraI | TTTAAA | 3 cut(s) | 106, 688, 879 |
| Eam1104I | CTCTTC | 2 cut(s) | 750, 1053 |
| EarI | CTCTTC | 2 cut(s) | 750, 1053 |
| Eco130I | CCWWGG | 2 cut(s) | 846, 1085 |
| Eco147I | AGGCCT | 2 cut(s) | 25, 389 |
| Eco47I | GGWCC | 1 cut(s) | 337 |
| Eco47III | AGCGCT | 1 cut(s) | 62 |
| Eco57I | CTGAAG | 2 cut(s) | 262, 552 |
| Eco88I | CYCGRG | 2 cut(s) | 173, 221 |
| EcoO109I | RGGNCCY | 2 cut(s) | 337, 1089 |
| EcoRII | CCWGG | 3 cut(s) | 339, 437, 711 |
| EcoT14I | CCWWGG | 2 cut(s) | 846, 1085 |
| ErhI | CCWWGG | 2 cut(s) | 846, 1085 |
| Esp3I | CGTCTC | 1 cut(s) | 258 |
| FaeI | CATG | 6 cut(s) | 164, 503, 850, 910, 979, 1044 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 638, 670 |
| FatI | CATG | 6 cut(s) | 160, 499, 846, 906, 975, 1040 |
| FauI | CCCGC | 1 cut(s) | 414 |
| FauNDI | CATATG | 1 cut(s) | 508 |
| FbaI | TGATCA | 1 cut(s) | 565 |
| FblI | GTMKAC | 1 cut(s) | 411 |
| Fnu4HI | GCNGC | 3 cut(s) | 231, 459, 462 |
| FokI | GGATG | 2 cut(s) | 454, 769 |
| Fsp4HI | GCNGC | 3 cut(s) | 231, 459, 462 |
| FspBI | CTAG | 4 cut(s) | 518, 638, 1086, 1125 |
| GlaI | GCGC | 1 cut(s) | 62 |
| GluI | GCNGC | 3 cut(s) | 231, 459, 462 |
| HaeII | RGCGCY | 1 cut(s) | 64 |
| HaeIII | GGCC | 6 cut(s) | 25, 135, 389, 884, 924, 1090 |
| HgaI | GACGC | 1 cut(s) | 1046 |
| HhaI | GCGC | 1 cut(s) | 63 |
| Hin1II | CATG | 6 cut(s) | 164, 503, 850, 910, 979, 1044 |
| Hin6I | GCGC | 1 cut(s) | 61 |
| HinP1I | GCGC | 1 cut(s) | 61 |
| HinfI | GANTC | 5 cut(s) | 224, 651, 716, 842, 903 |
| HphI | GGTGA | 2 cut(s) | 199, 610 |
| Hpy166II | GTNNAC | 5 cut(s) | 412, 741, 866, 1156, 1158 |
| Hpy188I | TCNGA | 3 cut(s) | 168, 303, 701 |
| Hpy188III | TCNNGA | 4 cut(s) | 221, 790, 907, 1167 |
| Hpy8I | GTNNAC | 5 cut(s) | 412, 741, 866, 1156, 1158 |
| HpyAV | CCTTC | 4 cut(s) | 36, 214, 328, 796 |
| HpyCH4III | ACNGT | 2 cut(s) | 475, 805 |
| HpyCH4IV | ACGT | 3 cut(s) | 71, 775, 1120 |
| HpyCH4V | TGCA | 7 cut(s) | 40, 230, 368, 407, 499, 956, 1118 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 458, 680 |
| HpyF3I | CTNAG | 3 cut(s) | 64, 311, 870 |
| HpySE526I | ACGT | 3 cut(s) | 71, 775, 1120 |
| Hsp92II | CATG | 6 cut(s) | 164, 503, 850, 910, 979, 1044 |
| HspAI | GCGC | 1 cut(s) | 61 |
| Ksp22I | TGATCA | 1 cut(s) | 565 |
| Kzo9I | GATC | 2 cut(s) | 565, 1207 |
| LmnI | GCTCC | 1 cut(s) | 16 |
| Lsp1109I | GCAGC | 3 cut(s) | 242, 445, 448 |
| LweI | GCATC | 3 cut(s) | 159, 965, 1060 |
| MaeI | CTAG | 4 cut(s) | 518, 638, 1086, 1125 |
| MaeII | ACGT | 3 cut(s) | 71, 775, 1120 |
| MaeIII | GTNAC | 3 cut(s) | 349, 832, 991 |
| MalI | GATC | 2 cut(s) | 567, 1209 |
| MbiI | CCGCTC | 1 cut(s) | 215 |
| MboI | GATC | 2 cut(s) | 565, 1207 |
| MboII | GAAGA | 9 cut(s) | 111, 524, 607, 641, 767, 1010, 1013, 1070, 1160 |
| MhlI | GDGCHC | 1 cut(s) | 1179 |
| MluCI | AATT | 4 cut(s) | 35, 318, 468, 610 |
| MlyI | GAGTC | 3 cut(s) | 233, 836, 897 |
| MmeI | TCCRAC | 1 cut(s) | 796 |
| MnlI | CCTC | 9 cut(s) | 166, 172, 187, 256, 318, 379, 537, 674, 1087 |
| MroXI | GAANNNNTTC | 1 cut(s) | 614 |
| MseI | TTAA | 5 cut(s) | 75, 105, 140, 687, 878 |
| MspA1I | CMGCKG | 1 cut(s) | 421 |
| MspR9I | CCNGG | 3 cut(s) | 341, 439, 713 |
| Mva1269I | GAATGC | 1 cut(s) | 974 |
| MvaI | CCWGG | 3 cut(s) | 341, 439, 713 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 458, 680 |
| NcoI | CCATGG | 1 cut(s) | 846 |
| NdeI | CATATG | 1 cut(s) | 508 |
| NdeII | GATC | 2 cut(s) | 565, 1207 |
| NlaIII | CATG | 6 cut(s) | 164, 503, 850, 910, 979, 1044 |
| NlaIV | GGNNCC | 2 cut(s) | 12, 1091 |
| NmeAIII | GCCGAG | 1 cut(s) | 111 |
| NmuCI | GTSAC | 1 cut(s) | 991 |
| NspI | RCATGY | 1 cut(s) | 164 |
| PaeR7I | CTCGAG | 1 cut(s) | 221 |
| PagI | TCATGA | 1 cut(s) | 906 |
| PceI | AGGCCT | 2 cut(s) | 25, 389 |
| PciI | ACATGT | 1 cut(s) | 160 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 489 |
| PctI | GAATGC | 1 cut(s) | 974 |
| PdmI | GAANNNNTTC | 1 cut(s) | 614 |
| PfeI | GAWTC | 2 cut(s) | 651, 716 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 852 |
| PfoI | TCCNGGA | 1 cut(s) | 711 |
| PkrI | GCNGC | 3 cut(s) | 232, 460, 463 |
| PleI | GAGTC | 3 cut(s) | 232, 836, 897 |
| PpsI | GAGTC | 3 cut(s) | 232, 836, 897 |
| PpuMI | RGGWCCY | 1 cut(s) | 337 |
| PscI | ACATGT | 1 cut(s) | 160 |
| Psp1406I | AACGTT | 1 cut(s) | 775 |
| Psp5II | RGGWCCY | 1 cut(s) | 337 |
| Psp6I | CCWGG | 3 cut(s) | 339, 437, 711 |
| PspGI | CCWGG | 3 cut(s) | 339, 437, 711 |
| PspN4I | GGNNCC | 2 cut(s) | 12, 1091 |
| PspPI | GGNCC | 2 cut(s) | 337, 1089 |
| PspPPI | RGGWCCY | 1 cut(s) | 337 |
| PstI | CTGCAG | 1 cut(s) | 232 |
| RsaI | GTAC | 3 cut(s) | 129, 740, 1157 |
| RsaNI | GTAC | 3 cut(s) | 128, 739, 1156 |
| SaqAI | TTAA | 5 cut(s) | 75, 105, 140, 687, 878 |
| SatI | GCNGC | 3 cut(s) | 231, 459, 462 |
| Sau3AI | GATC | 2 cut(s) | 565, 1207 |
| Sau96I | GGNCC | 2 cut(s) | 337, 1089 |
| SchI | GAGTC | 3 cut(s) | 233, 836, 897 |
| ScrFI | CCNGG | 3 cut(s) | 341, 439, 713 |
| SduI | GDGCHC | 1 cut(s) | 1179 |
| SfaNI | GCATC | 3 cut(s) | 159, 965, 1060 |
| SfcI | CTRYAG | 1 cut(s) | 228 |
| Sfr274I | CTCGAG | 1 cut(s) | 221 |
| SinI | GGWCC | 1 cut(s) | 337 |
| SlaI | CTCGAG | 1 cut(s) | 221 |
| SmlI | CTYRAG | 2 cut(s) | 221, 1178 |
| SmoI | CTYRAG | 2 cut(s) | 221, 1178 |
| Sse9I | AATT | 4 cut(s) | 35, 318, 468, 610 |
| SseBI | AGGCCT | 2 cut(s) | 25, 389 |
| SsiI | CCGC | 5 cut(s) | 213, 238, 421, 661, 770 |
| SspI | AATATT | 1 cut(s) | 428 |
| SspMI | CTAG | 4 cut(s) | 518, 638, 1086, 1125 |
| StuI | AGGCCT | 2 cut(s) | 25, 389 |
| StyD4I | CCNGG | 3 cut(s) | 339, 437, 711 |
| StyI | CCWWGG | 2 cut(s) | 846, 1085 |
| TaaI | ACNGT | 2 cut(s) | 475, 805 |
| TaiI | ACGT | 3 cut(s) | 74, 778, 1123 |
| TaqI | TCGA | 5 cut(s) | 48, 222, 1014, 1068, 1206 |
| TasI | AATT | 4 cut(s) | 35, 318, 468, 610 |
| TatI | WGTACW | 3 cut(s) | 127, 738, 1155 |
| TfiI | GAWTC | 2 cut(s) | 651, 716 |
| Tru1I | TTAA | 5 cut(s) | 75, 105, 140, 687, 878 |
| Tru9I | TTAA | 5 cut(s) | 75, 105, 140, 687, 878 |
| TscAI | CASTG | 2 cut(s) | 810, 868 |
| TseFI | GTSAC | 1 cut(s) | 991 |
| TseI | GCWGC | 3 cut(s) | 230, 458, 461 |
| Tsp45I | GTSAC | 1 cut(s) | 991 |
| TspDTI | ATGAA | 8 cut(s) | 34, 165, 287, 525, 599, 612, 923, 992 |
| TspRI | CASTG | 2 cut(s) | 810, 868 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 852 |
| VpaK11BI | GGWCC | 1 cut(s) | 337 |
| XapI | RAATTY | 1 cut(s) | 610 |
| XceI | RCATGY | 1 cut(s) | 164 |
| XhoI | CTCGAG | 1 cut(s) | 221 |
| XmaJI | CCTAGG | 1 cut(s) | 1085 |
| XmiI | GTMKAC | 1 cut(s) | 411 |
| XmnI | GAANNNNTTC | 1 cut(s) | 614 |
| XspI | CTAG | 4 cut(s) | 518, 638, 1086, 1125 |