Prupe.4G191000_v2.0.a1

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000053
Physical Location & Seq
Forward (+)
11423113 .. 11426902
3790 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G191000.1

Sequence Viewer

Length: 1692 bp
ATGTCTGTTCAAGTTTCACTTGCATCGGCTCAACCTCAAACCCCTAAGGCCACTCCTGATGATGTTAATCGACGTTGTGCTAATTTTTCTCCGAGCATGTGGGGCTATCATTTTCTGTCATATGCTTCTGTGGAAACAAACATCAAAGCTAAGCAACGTGCCCAAGAACTGAAGGAAAAAGTGAAGATGATCATAATGGCTCCTGTTAAAAAGCCTTCACAAAAATTGGACTTGATTCATGACATCCAGCGCTTAGGTGTCTCTCACCATTTTGAAAATGAGATTGACGAACTTCTGCAGCAGATTCACACCAGCTCCCATTGCAATCCTGAGTCTGGGGACCAAGAAACTGATAATGAGCTTTACACTGCAGCGCTCCGATTTCGATTACTCAGACAACAAGGTTATAATATTTCATGCGATATATTCAATAATTTCAAGGACAGTGATGGGAAATTTAAGGAATCTCTGGTGAATGATGTAGTAGGACTTTTAAGCTTGTACGAAGCCACACATCTTAGGATCCACGGAGAGGATATACTTGATGAGGCCTTAACCTTCACCACCACTCATCTTGAATCCGCAACGCACCGTTTAAGCCCCGTACTATTGAAACAAGTCACTCATGCCCTGTACCAGCCATTCTGGAAGGGCTTGCCAAGGCTAGAAACAAGGCATTACCTGTCTCTCTATCAAGAACGCGATTCACATAACGAGACTCTCCTGAATTTCGCAAAGCTGGATTTCAATCTGCTGCAACAAGTTCATCAAAGAGAACTAAGTGAAATTTCAAGGTGGTGGAAGGACTTAGACTTTGTAAACAAGCTACCTTTTGCAAGAGACAGAGTAGTTGAGAGCTACTTTTGGGCTTCGGGAGTACACTTTGAGCCTCAATATTACTTTGCTAGGATAACACTATGCAAAGTTATTGCTTTGATAACCATCCTTAATGACATCTATGATGTGTACGGCACACATGAGGAACTAGAGCTCTTTACTGAAGCTGTTGAAAGGTGGGACATCTCTGCTATGGATCATCTGCCAGAGTACATGAAAGTTTGCTATCAAGCACTATTGGATGTTTACGTTGAAATTGAAGAAAATCTTGCAAATGAGGGAAACTTATATAGCATCCACTACGCAAGAGAAGCAATGAAAGTCCTAGTTAGAGCTTACTTCCGAAAAGCCAAATGGTTCCATCAGAAATACACACCAACAATGGATGACTACATGTCGGCAGCGCTTAATGCATCCAACTTCACGTTGGCAACCACATCCTTTGTTGGAATGGGAGATATTGCTACCAAATACTCCATGGATTGGGTGTTCGACGACCCTAAGATGGTAAAGGCTGCATCATTAATTGGTAGAATCATGAATGACATCAAATCCCGCCAGTTTGAGCAAAAGAGAGGACATGTTGCCTCAGCTGTGGAATGCTACATGAAAGAATATGGTGCCACAGAAGAAGAAGCAAATATCGAACTAAGCAAGCAAGTGAATAATGCATGGAAGGACATAAACGAAACGTGCATCCAGAACACCACCATCCCCATGCCCCTGTTACTGCGAATTTTGAATCTTGCACGTGTGGTTGAAGTTTTATACAAGCATGGTGATGGCTTTACTCATGCTGGAATTTTTCTCAAGGATTCTGAAGTTTCTCTGTTTGTAGAACCTGTGCCCCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

564

Amino Acids

65.09

Weight (kDa)

5.72

Isoelectric Point (pI)

45.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 408
AccB1I GGYRCC 1 cut(s) 1457
AccB7I CCANNNNNTGG 1 cut(s) 1320
AccII CGCG 1 cut(s) 702
AciI CCGC 2 cut(s) 582, 1393
AclWI GGATC 3 cut(s) 517, 530, 1041
AcsI RAATTY 5 cut(s) 455, 727, 786, 1572, 1638
AcuI CTGAAG 3 cut(s) 191, 1020, 1677
AcvI CACGTG 1 cut(s) 1589
AfaI GTAC 6 cut(s) 503, 606, 635, 879, 968, 1049
AfeI AGCGCT 3 cut(s) 251, 375, 1242
AfiI CCNNNNNNNGG 4 cut(s) 335, 532, 1320, 1342
AflIII ACRYGT 3 cut(s) 1230, 1417, 1588
AhdI GACNNNNNGTC 1 cut(s) 1231
AloI GAACNNNNNNTCC 2 cut(s) 1310, 1342
Alw21I GWGCWC 1 cut(s) 993
Alw26I GTCTC 4 cut(s) 265, 690, 710, 834
AlwI GGATC 3 cut(s) 517, 530, 1041
Aor51HI AGCGCT 3 cut(s) 251, 375, 1242
AoxI GGCC 2 cut(s) 48, 549
ApeKI GCWGC 5 cut(s) 298, 371, 754, 1238, 1352
ApoI RAATTY 5 cut(s) 455, 727, 786, 1572, 1638
ArsI GACNNNNNNTTYG 2 cut(s) 797, 829
AseI ATTAAT 1 cut(s) 1361
AspLEI GCGC 3 cut(s) 252, 376, 1243
AspS9I GGNCC 1 cut(s) 340
AsuHPI GGTGA 4 cut(s) 257, 484, 553, 1628
AvaII GGWCC 1 cut(s) 340
AxyI CCTNAGG 1 cut(s) 45
BaeGI GKGCMC 2 cut(s) 163, 1686
BamHI GGATCC 1 cut(s) 522
BanI GGYRCC 1 cut(s) 1457
BanII GRGCYC 1 cut(s) 993
BbrPI CACGTG 1 cut(s) 1589
Bbv12I GWGCWC 1 cut(s) 993
BbvCI CCTCAGC 1 cut(s) 1426
BbvI GCAGC 5 cut(s) 310, 383, 741, 1250, 1339
BccI CCATC 6 cut(s) 443, 950, 1206, 1336, 1556, 1613
BceAI ACGGC 1 cut(s) 985
BclI TGATCA 1 cut(s) 189
BcoDI GTCTC 4 cut(s) 265, 690, 710, 834
BfaI CTAG 4 cut(s) 665, 906, 986, 1163
BfmI CTRYAG 3 cut(s) 296, 369, 1688
BfoI RGCGCY 3 cut(s) 253, 377, 1244
BisI GCNGC 5 cut(s) 299, 372, 755, 1239, 1353
BlpI GCTNAGC 1 cut(s) 150
BlsI GCNGC 5 cut(s) 300, 373, 756, 1240, 1354
Bme18I GGWCC 1 cut(s) 340
BmeRI GACNNNNNGTC 1 cut(s) 1231
BmgT120I GGNCC 1 cut(s) 340
BmiI GGNNCC 5 cut(s) 201, 341, 524, 1196, 1459
BmsI GCATC 5 cut(s) 32, 1140, 1259, 1364, 1542
Bpu10I CCTNAGC 2 cut(s) 253, 1426
Bpu1102I GCTNAGC 1 cut(s) 150
BpuEI CTTGAG 1 cut(s) 1631
BsaAI YACGTR 1 cut(s) 1589
BsaBI GATNNNNATC 3 cut(s) 66, 747, 941
BsaJI CCNNGG 3 cut(s) 526, 659, 1314
BsaXI ACNNNNNCTCC 2 cut(s) 299, 329
Bsc4I CCNNNNNNNGG 4 cut(s) 335, 532, 1320, 1342
Bse1I ACTGG 1 cut(s) 1396
Bse21I CCTNAGG 1 cut(s) 45
Bse3DI GCAATG 2 cut(s) 319, 1158
Bse8I GATNNNNATC 3 cut(s) 66, 747, 941
BseDI CCNNGG 3 cut(s) 526, 659, 1314
BseGI GGATG 9 cut(s) 243, 942, 1084, 1131, 1228, 1250, 1274, 1533, 1548
BseJI GATNNNNATC 3 cut(s) 66, 747, 941
BseLI CCNNNNNNNGG 4 cut(s) 335, 532, 1320, 1342
BseMI GCAATG 2 cut(s) 319, 1158
BseMII CTCAG 3 cut(s) 321, 406, 1440
BseNI ACTGG 1 cut(s) 1396
BseSI GKGCMC 2 cut(s) 163, 1686
BseXI GCAGC 5 cut(s) 310, 383, 741, 1250, 1339
Bsh1236I CGCG 1 cut(s) 702
BshFI GGCC 2 cut(s) 50, 551
BshNI GGYRCC 1 cut(s) 1457
BsiHKAI GWGCWC 1 cut(s) 993
BslFI GGGAC 2 cut(s) 353, 1031
BslI CCNNNNNNNGG 4 cut(s) 335, 532, 1320, 1342
BsmAI GTCTC 4 cut(s) 265, 690, 710, 834
BsmFI GGGAC 2 cut(s) 353, 1031
BsmI GAATGC 1 cut(s) 1442
BsnI GGCC 2 cut(s) 50, 551
Bsp1286I GDGCHC 3 cut(s) 163, 993, 1686
Bsp143I GATC 3 cut(s) 189, 522, 1033
Bsp1720I GCTNAGC 1 cut(s) 150
Bsp19I CCATGG 1 cut(s) 1314
BspACI CCGC 2 cut(s) 582, 1393
BspANI GGCC 2 cut(s) 50, 551
BspCNI CTCAG 3 cut(s) 322, 405, 1439
BspFNI CGCG 1 cut(s) 702
BspHI TCATGA 2 cut(s) 238, 1374
BspLI GGNNCC 5 cut(s) 201, 341, 524, 1196, 1459
BspMAI CTGCAG 2 cut(s) 300, 373
BspPI GGATC 3 cut(s) 517, 530, 1041
BspT107I GGYRCC 1 cut(s) 1457
BsrDI GCAATG 2 cut(s) 319, 1158
BsrI ACTGG 1 cut(s) 1396
BssECI CCNNGG 3 cut(s) 526, 659, 1314
BssMI GATC 3 cut(s) 189, 522, 1033
BssT1I CCWWGG 2 cut(s) 659, 1314
Bst4CI ACNGT 2 cut(s) 446, 593
BstBAI YACGTR 1 cut(s) 1589
BstC8I GCNNGC 2 cut(s) 656, 1493
BstDSI CCRYGG 2 cut(s) 526, 1314
BstF5I GGATG 9 cut(s) 243, 942, 1084, 1131, 1228, 1250, 1274, 1533, 1548
BstFNI CGCG 1 cut(s) 702
BstH2I RGCGCY 3 cut(s) 253, 377, 1244
BstHHI GCGC 3 cut(s) 252, 376, 1243
BstKTI GATC 3 cut(s) 192, 525, 1036
BstMAI GTCTC 4 cut(s) 265, 690, 710, 834
BstMBI GATC 3 cut(s) 189, 522, 1033
BstMWI GCNNNNNNNGC 4 cut(s) 102, 321, 1148, 1247
BstNSI RCATGY 3 cut(s) 100, 1234, 1421
BstSFI CTRYAG 3 cut(s) 296, 369, 1688
BstSLI GKGCMC 2 cut(s) 163, 1686
BstUI CGCG 1 cut(s) 702
BstV1I GCAGC 5 cut(s) 310, 383, 741, 1250, 1339
BstX2I RGATCY 1 cut(s) 522
BstYI RGATCY 1 cut(s) 522
Bsu36I CCTNAGG 1 cut(s) 45
BsuRI GGCC 2 cut(s) 50, 551
BtgI CCRYGG 2 cut(s) 526, 1314
BtsCI GGATG 9 cut(s) 243, 942, 1084, 1131, 1228, 1250, 1274, 1533, 1548
BtsI GCAGTG 1 cut(s) 366
BtsIMutI CAGTG 2 cut(s) 366, 451
Cac8I GCNNGC 2 cut(s) 656, 1493
CciI TCATGA 2 cut(s) 238, 1374
CfoI GCGC 3 cut(s) 252, 376, 1243
Cfr13I GGNCC 1 cut(s) 340
Csp6I GTAC 6 cut(s) 502, 605, 634, 878, 967, 1048
CspCI CAANNNNNGTGG 4 cut(s) 556, 591, 1261, 1296
CviQI GTAC 6 cut(s) 502, 605, 634, 878, 967, 1048
DpnI GATC 3 cut(s) 191, 524, 1035
DpnII GATC 3 cut(s) 189, 522, 1033
DriI GACNNNNNGTC 1 cut(s) 1231
Eam1105I GACNNNNNGTC 1 cut(s) 1231
Ecl136II GAGCTC 1 cut(s) 991
Eco130I CCWWGG 2 cut(s) 659, 1314
Eco147I AGGCCT 1 cut(s) 551
Eco24I GRGCYC 1 cut(s) 993
Eco47I GGWCC 1 cut(s) 340
Eco47III AGCGCT 3 cut(s) 251, 375, 1242
Eco53kI GAGCTC 1 cut(s) 991
Eco57I CTGAAG 3 cut(s) 191, 1020, 1677
Eco72I CACGTG 1 cut(s) 1589
Eco81I CCTNAGG 1 cut(s) 45
EcoICRI GAGCTC 1 cut(s) 991
EcoT14I CCWWGG 2 cut(s) 659, 1314
EcoT22I ATGCAT 2 cut(s) 1252, 1510
EcoT38I GRGCYC 1 cut(s) 993
ErhI CCWWGG 2 cut(s) 659, 1314
FalI AAGNNNNNCTT 3 cut(s) 35, 1089, 1121
FaqI GGGAC 2 cut(s) 353, 1031
FauI CCCGC 1 cut(s) 1400
FauNDI CATATG 1 cut(s) 121
FbaI TGATCA 1 cut(s) 189
Fnu4HI GCNGC 5 cut(s) 299, 372, 755, 1239, 1353
FokI GGATG 9 cut(s) 230, 929, 1091, 1118, 1235, 1237, 1261, 1520, 1535
FriOI GRGCYC 1 cut(s) 993
Fsp4HI GCNGC 5 cut(s) 299, 372, 755, 1239, 1353
FspBI CTAG 4 cut(s) 665, 906, 986, 1163
GlaI GCGC 3 cut(s) 251, 375, 1242
GluI GCNGC 5 cut(s) 299, 372, 755, 1239, 1353
HaeII RGCGCY 3 cut(s) 253, 377, 1244
HaeIII GGCC 2 cut(s) 50, 551
HhaI GCGC 3 cut(s) 252, 376, 1243
Hin6I GCGC 3 cut(s) 250, 374, 1241
HinP1I GCGC 3 cut(s) 250, 374, 1241
HindIII AAGCTT 1 cut(s) 496
HphI GGTGA 4 cut(s) 257, 484, 553, 1628
Hpy166II GTNNAC 4 cut(s) 820, 880, 967, 1084
Hpy188I TCNGA 6 cut(s) 93, 380, 395, 1181, 1203, 1657
Hpy8I GTNNAC 4 cut(s) 820, 880, 967, 1084
Hpy99I CGWCG 2 cut(s) 75, 1334
HpyAV CCTTC 6 cut(s) 166, 225, 568, 643, 796, 1507
HpyCH4III ACNGT 2 cut(s) 446, 593
HpyCH4IV ACGT 6 cut(s) 73, 157, 1086, 1262, 1529, 1588
HpyF10VI GCNNNNNNNGC 4 cut(s) 102, 321, 1148, 1247
HpySE526I ACGT 6 cut(s) 73, 157, 1086, 1262, 1529, 1588
HspAI GCGC 3 cut(s) 250, 374, 1241
Ksp22I TGATCA 1 cut(s) 189
Kzo9I GATC 3 cut(s) 189, 522, 1033
LmnI GCTCC 3 cut(s) 205, 320, 381
Lsp1109I GCAGC 5 cut(s) 310, 383, 741, 1250, 1339
LweI GCATC 5 cut(s) 32, 1140, 1259, 1364, 1542
MaeI CTAG 4 cut(s) 665, 906, 986, 1163
MaeII ACGT 6 cut(s) 73, 157, 1086, 1262, 1529, 1588
MaeIII GTNAC 2 cut(s) 619, 1563
MalI GATC 3 cut(s) 191, 524, 1035
MboI GATC 3 cut(s) 189, 522, 1033
MboII GAAGA 4 cut(s) 196, 1109, 1478, 1481
MflI RGATCY 1 cut(s) 522
MhlI GDGCHC 3 cut(s) 163, 993, 1686
MlyI GAGTC 2 cut(s) 341, 712
MmeI TCCRAC 2 cut(s) 1264, 1278
MnlI CCTC 8 cut(s) 45, 526, 541, 900, 973, 1108, 1406, 1435
Mph1103I ATGCAT 2 cut(s) 1252, 1510
MseI TTAA 9 cut(s) 66, 207, 459, 494, 554, 596, 948, 1245, 1361
MslI CAYNNNNRTG 2 cut(s) 1553, 1617
MspA1I CMGCKG 1 cut(s) 1430
Mva1269I GAATGC 1 cut(s) 1442
MvnI CGCG 1 cut(s) 702
MwoI GCNNNNNNNGC 4 cut(s) 102, 321, 1148, 1247
NcoI CCATGG 1 cut(s) 1314
NdeI CATATG 1 cut(s) 121
NdeII GATC 3 cut(s) 189, 522, 1033
NlaIV GGNNCC 5 cut(s) 201, 341, 524, 1196, 1459
NmuCI GTSAC 1 cut(s) 619
NsiI ATGCAT 2 cut(s) 1252, 1510
NspI RCATGY 3 cut(s) 100, 1234, 1421
PagI TCATGA 2 cut(s) 238, 1374
PceI AGGCCT 1 cut(s) 551
PciI ACATGT 2 cut(s) 1230, 1417
PctI GAATGC 1 cut(s) 1442
PfeI GAWTC 8 cut(s) 235, 304, 464, 578, 704, 1371, 1579, 1652
PflMI CCANNNNNTGG 1 cut(s) 1320
PkrI GCNGC 5 cut(s) 300, 373, 756, 1240, 1354
PleI GAGTC 2 cut(s) 340, 712
PmaCI CACGTG 1 cut(s) 1589
PmlI CACGTG 1 cut(s) 1589
PpsI GAGTC 2 cut(s) 340, 712
Ppu21I YACGTR 1 cut(s) 1589
PscI ACATGT 2 cut(s) 1230, 1417
PshBI ATTAAT 1 cut(s) 1361
PsiI TTATAA 1 cut(s) 408
Psp124BI GAGCTC 1 cut(s) 993
PspCI CACGTG 1 cut(s) 1589
PspN4I GGNNCC 5 cut(s) 201, 341, 524, 1196, 1459
PspPI GGNCC 1 cut(s) 340
PstI CTGCAG 2 cut(s) 300, 373
PsuI RGATCY 1 cut(s) 522
PvuII CAGCTG 1 cut(s) 1430
RsaI GTAC 6 cut(s) 503, 606, 635, 879, 968, 1049
RsaNI GTAC 6 cut(s) 502, 605, 634, 878, 967, 1048
RseI CAYNNNNRTG 2 cut(s) 1553, 1617
SacI GAGCTC 1 cut(s) 993
SaqAI TTAA 9 cut(s) 66, 207, 459, 494, 554, 596, 948, 1245, 1361
SatI GCNGC 5 cut(s) 299, 372, 755, 1239, 1353
Sau3AI GATC 3 cut(s) 189, 522, 1033
Sau96I GGNCC 1 cut(s) 340
SchI GAGTC 2 cut(s) 341, 712
SduI GDGCHC 3 cut(s) 163, 993, 1686
SfaNI GCATC 5 cut(s) 32, 1140, 1259, 1364, 1542
SfcI CTRYAG 3 cut(s) 296, 369, 1688
SinI GGWCC 1 cut(s) 340
SmiMI CAYNNNNRTG 2 cut(s) 1553, 1617
SmlI CTYRAG 1 cut(s) 1646
SmoI CTYRAG 1 cut(s) 1646
SseBI AGGCCT 1 cut(s) 551
SsiI CCGC 2 cut(s) 582, 1393
SspI AATATT 2 cut(s) 412, 896
SspMI CTAG 4 cut(s) 665, 906, 986, 1163
SstI GAGCTC 1 cut(s) 993
StuI AGGCCT 1 cut(s) 551
StyI CCWWGG 2 cut(s) 659, 1314
TaaI ACNGT 2 cut(s) 446, 593
TaiI ACGT 6 cut(s) 76, 160, 1089, 1265, 1532, 1591
TaqI TCGA 4 cut(s) 70, 385, 1329, 1482
TatI WGTACW 2 cut(s) 877, 1047
TfiI GAWTC 8 cut(s) 235, 304, 464, 578, 704, 1371, 1579, 1652
Tru1I TTAA 9 cut(s) 66, 207, 459, 494, 554, 596, 948, 1245, 1361
Tru9I TTAA 9 cut(s) 66, 207, 459, 494, 554, 596, 948, 1245, 1361
TscAI CASTG 2 cut(s) 373, 451
TseFI GTSAC 1 cut(s) 619
TseI GCWGC 5 cut(s) 298, 371, 754, 1238, 1352
Tsp45I GTSAC 1 cut(s) 619
TspDTI ATGAA 7 cut(s) 227, 405, 755, 1067, 1169, 1391, 1460
TspGWI ACGGA 1 cut(s) 543
TspRI CASTG 2 cut(s) 373, 451
Van91I CCANNNNNTGG 1 cut(s) 1320
VpaK11BI GGWCC 1 cut(s) 340
VspI ATTAAT 1 cut(s) 1361
XapI RAATTY 5 cut(s) 455, 727, 786, 1572, 1638
XceI RCATGY 3 cut(s) 100, 1234, 1421
XcmI CCANNNNNNNNNTGG 2 cut(s) 1261, 1312
XspI CTAG 4 cut(s) 665, 906, 986, 1163
Zsp2I ATGCAT 2 cut(s) 1252, 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.