Rmu_sc0004192.1_g000012

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004192.1
OG0000053
Physical Location & Seq
Forward (+)
46083 .. 52957
6875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004192.1_g000012.1.cds

Sequence Viewer

Length: 2607 bp
atgtctgtccctgatttagtgtctgagctagctcaaaacccgactattactgccactcctgatgttactcgacgttcagctaattattccccaagcatttggggtgatcattttctgtcatatgcttccatcgaagcggcagatagtaaaagtaagaaacatgtccaagacttgaaggaagaactgaagaggatgataatggctccagcgaaaaggccttcacaaaagttgcacttcatcgaccacattcagcgcttaggtgtctcataccatttcgaagatgagattgatcaaattttgcagcaagttcaccgagaagaagaatatgatgatctttgcaccactgctctaagctttcgattgcttagacaacaaggttataacgcttcatgcaatatgtttaacaagttcaaggaagatgatggaagatttaaggaatcccttattgatgatgtacttggcctgttaagtttgtatgaagcctcacatcttcagatgcccggggaggatatactgaacgaggcactaaccttcaccaccgctcatctcgagtctgcagcacaccgcttaagctcatcgtctcagctttggaaacaagtaactcatgccttgtatcagccactttggaagggcatgcccaggattgaagcgaggcatcacttgtctatttaccaagaagatgattcacataatgaaactctcctgaattttgcaaagatggatttcaacactgtgcagaaaattcatcagaaagaactaagtgaaattacgaggtggtggaaggacttggactttgtaaccaagctcccttttgcaagagacaaggtagttgaggcctatttttgggcttttgcagtctactttcagccggaatattactttgccaggatggtattagcaaaagctgttgctataattacagtcattgacgacatatacgatgtgcatggcacatatgaagaactagagagctttactgaagctattgagaggtgggacatttctgctgttgatcaactgccagattatatgaaagtctgttataaagcgctgttgaatttcttcaccgagcttgaagaaagtctaacgaataagggaatcttataccgcctccactatgcgagagaaggattcaaagttcaagtcagagcttacttccaggaagcaaaatggttcaaacaaaagtacacaccatcaatggaagagtatatgtctgtggaacgctatacatccttcttcatgttagcaacagtgtcatttgttggaatgggagttattgttacaaaagactccatggattgggttttcagtgaacctaagcttttaaaggccacatctattattggcagactcatgaatgaccttgtaggccataagtttgagcaaaagagagaacacattgcatcagccgtggaatgctacatgaaacaatatgctgtcacagaagaagaagcagaggtcgagctaactaaacaagtgaatgacgcatggaaagacataaacgaagagtggctcgatgccacctctatccctaggcccctactcttgctgattttgaactttgcacgttctagtgaaattctatacaagggggaggatgtgtacactcattctggaaatatgctcaaggactccgactcgccgactcaatggtggttcaccgttcactccctcaccgcctctcccttttttccggcgacctctgttctctaccaaacctctcttcgtccgcgaaagatcggccacctctttttccgcattggtttggagtttgaccaagttaggcggagattgacgatggcgaagaggcggaagctgagtgtttctgttagtgatttcggatttgaagttgtgtttcagcgttcagttgtatgtttggaggtctgtgattgtgaaacattggttaggcaggacgatgagcatgacatggatgttgatactgcaacttctgctactcaaagtcccctaagaaacttgttggctaaagcttgtgccacagctggcattgctcgactaaagaacatgaatgggggaactattgatgtcctgtcctggcatcaaggctttacttctattactctcttagctatgaatataccggtgatatcgcagaaattagagggtggacatgctccaggatggcaagatgtgcaacctcatgatcctcaagttcaagatgcagccaaccatgctgtgaagagccttcagcaaaagtccaattcattgttcccttatgagcttcaagagattgtccatgctaaggcagagaatgcttctccggaaaaatcaaaagatggaaaagatgctgaaactgcagaagctggaccctcctcgagcaaggatgcttcttccaaaaaatcaacctgtgcaaatgacgctgaaacttcaggagctggacgagcaagacgtctaccttactttactttattttcatttttcaaggatgtgccccctcaaactgatgcaagaggtgtaaatgatcctgagtcatcgggagctggaccttcctcaagcaaggttgcttccctagaaaatgatccaagtggtggaagtgagattgaaactctcctccttaagcaaggtttttcttttgtgcccaaaccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

868

Amino Acids

98.71

Weight (kDa)

5.56

Isoelectric Point (pI)

52.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 381, 1044
AatII GACGTC 1 cut(s) 2410
AccB7I CCANNNNNTGG 2 cut(s) 1299, 2546
AccBSI CCGCTC 1 cut(s) 542
AccI GTMKAC 2 cut(s) 858, 2410
AccII CGCG 1 cut(s) 1732
AccIII TCCGGA 1 cut(s) 2278
AciI CCGC 9 cut(s) 137, 540, 565, 1108, 1677, 1730, 1756, 1786, 1810
AclWI GGATC 3 cut(s) 2156, 2474, 2531
AcoI YGGCCR 1 cut(s) 1741
AcsI RAATTY 5 cut(s) 294, 706, 741, 1057, 1578
AcuI CTGAAG 5 cut(s) 206, 476, 999, 2189, 2370
AcyI GRCGYC 1 cut(s) 2407
AfaI GTAC 3 cut(s) 456, 1187, 1604
AfeI AGCGCT 2 cut(s) 254, 1050
AfiI CCNNNNNNNGG 4 cut(s) 843, 1299, 2260, 2546
AflII CTTAAG 2 cut(s) 568, 2573
AflIII ACRYGT 1 cut(s) 160
AgeI ACCGGT 1 cut(s) 2098
AjnI CCWGG 5 cut(s) 638, 884, 1158, 2051, 2134
AjuI GAANNNNNNNTTGG 4 cut(s) 1707, 1739, 2210, 2242
AloI GAACNNNNNNTCC 2 cut(s) 1122, 1154
Alw26I GTCTC 3 cut(s) 268, 585, 813
AlwI GGATC 3 cut(s) 2156, 2474, 2531
AlwNI CAGNNNCTG 2 cut(s) 2321, 2393
Ama87I CYCGRG 3 cut(s) 500, 548, 2332
Aor13HI TCCGGA 1 cut(s) 2278
Aor51HI AGCGCT 2 cut(s) 254, 1050
AoxI GGCC 7 cut(s) 215, 460, 834, 1329, 1369, 1535, 1741
ApeKI GCWGC 3 cut(s) 301, 557, 2180
ApoI RAATTY 5 cut(s) 294, 706, 741, 1057, 1578
ArsI GACNNNNNNTTYG 4 cut(s) 776, 808, 1128, 1160
AsiGI ACCGGT 1 cut(s) 2098
Asp700I GAANNNNTTC 1 cut(s) 1061
AspA2I CCTAGG 1 cut(s) 1532
AspLEI GCGC 2 cut(s) 255, 1051
AspS9I GGNCC 3 cut(s) 1536, 2324, 2501
AsuC2I CCSGG 2 cut(s) 501, 502
AsuHPI GGTGA 7 cut(s) 116, 302, 526, 1057, 1651, 1666, 2113
AsuII TTCGAA 1 cut(s) 276
AsuNHI GCTAGC 1 cut(s) 28
AvaI CYCGRG 3 cut(s) 500, 548, 2332
AvaII GGWCC 2 cut(s) 2324, 2501
AvrII CCTAGG 1 cut(s) 1532
BaeGI GKGCMC 2 cut(s) 2451, 2598
BbvI GCAGC 3 cut(s) 313, 569, 2192
BccI CCATC 8 cut(s) 137, 416, 712, 883, 1201, 1792, 2133, 2288
BceAI ACGGC 1 cut(s) 1394
BciT130I CCWGG 5 cut(s) 640, 886, 1160, 2053, 2136
BclI TGATCA 3 cut(s) 106, 289, 1012
BcnI CCSGG 2 cut(s) 501, 502
BcoDI GTCTC 3 cut(s) 268, 585, 813
BfaI CTAG 5 cut(s) 29, 965, 1533, 1572, 2528
BfmI CTRYAG 2 cut(s) 555, 2313
BfoI RGCGCY 2 cut(s) 256, 1052
BfrI CTTAAG 2 cut(s) 568, 2573
BisI GCNGC 4 cut(s) 138, 302, 558, 2181
BlnI CCTAGG 1 cut(s) 1532
BlsI GCNGC 4 cut(s) 139, 303, 559, 2182
Bme1390I CCNGG 7 cut(s) 501, 502, 640, 886, 1160, 2053, 2136
Bme18I GGWCC 2 cut(s) 2324, 2501
BmeT110I CYCGRG 3 cut(s) 500, 548, 2332
BmgT120I GGNCC 3 cut(s) 1536, 2324, 2501
BmiI GGNNCC 3 cut(s) 204, 1538, 2326
BmrFI CCNGG 7 cut(s) 501, 502, 640, 886, 1160, 2053, 2136
BmsI GCATC 9 cut(s) 486, 664, 1412, 1507, 2065, 2167, 2293, 2332, 2452
BmtI GCTAGC 1 cut(s) 32
BpmI CTGGAG 2 cut(s) 189, 2118
Bpu10I CCTNAGC 3 cut(s) 256, 1317, 2259
Bpu14I TTCGAA 1 cut(s) 276
BpuEI CTTGAG 3 cut(s) 1610, 2151, 2494
BpuMI CCSGG 2 cut(s) 501, 502
BsaHI GRCGYC 1 cut(s) 2407
BsaJI CCNNGG 6 cut(s) 500, 501, 638, 1293, 1410, 1532
BsaWI WCCGGW 2 cut(s) 2098, 2278
BsaXI ACNNNNNCTCC 8 cut(s) 40, 70, 1263, 1293, 1586, 1616, 1666, 1696
Bsc4I CCNNNNNNNGG 4 cut(s) 843, 1299, 2260, 2546
Bse118I RCCGGY 1 cut(s) 2098
Bse3DI GCAATG 2 cut(s) 1398, 2004
BseAI TCCGGA 1 cut(s) 2278
BseBI CCWGG 5 cut(s) 640, 886, 1160, 2053, 2136
BseDI CCNNGG 6 cut(s) 500, 501, 638, 1293, 1410, 1532
BseGI GGATG 8 cut(s) 198, 894, 1229, 1603, 1936, 2144, 2347, 2449
BseLI CCNNNNNNNGG 4 cut(s) 843, 1299, 2260, 2546
BseMI GCAATG 2 cut(s) 1398, 2004
BseMII CTCAG 4 cut(s) 15, 596, 1808, 2475
BseRI GAGGAG 2 cut(s) 2320, 2558
BseSI GKGCMC 2 cut(s) 2451, 2598
BseXI GCAGC 3 cut(s) 313, 569, 2192
BsgI GTGCAG 1 cut(s) 755
Bsh1236I CGCG 1 cut(s) 1732
BshFI GGCC 7 cut(s) 217, 462, 836, 1331, 1371, 1537, 1743
BshTI ACCGGT 1 cut(s) 2098
BsiHKCI CYCGRG 3 cut(s) 500, 548, 2332
BsiSI CCGG 5 cut(s) 501, 869, 1694, 2099, 2279
BslFI GGGAC 2 cut(s) 1010, 1947
BslI CCNNNNNNNGG 4 cut(s) 843, 1299, 2260, 2546
BsmAI GTCTC 3 cut(s) 268, 585, 813
BsmBI CGTCTC 1 cut(s) 585
BsmFI GGGAC 2 cut(s) 1010, 1947
BsmI GAATGC 2 cut(s) 1421, 2275
BsnI GGCC 7 cut(s) 217, 462, 836, 1331, 1371, 1537, 1743
BsoBI CYCGRG 3 cut(s) 500, 548, 2332
Bsp119I TTCGAA 1 cut(s) 276
Bsp1286I GDGCHC 2 cut(s) 2451, 2598
Bsp13I TCCGGA 1 cut(s) 2278
Bsp1407I TGTACA 1 cut(s) 1602
Bsp143I GATC 8 cut(s) 106, 289, 331, 1012, 1737, 2161, 2479, 2536
Bsp19I CCATGG 1 cut(s) 1293
BspACI CCGC 9 cut(s) 137, 540, 565, 1108, 1677, 1730, 1756, 1786, 1810
BspANI GGCC 7 cut(s) 217, 462, 836, 1331, 1371, 1537, 1743
BspCNI CTCAG 4 cut(s) 16, 595, 1809, 2476
BspEI TCCGGA 1 cut(s) 2278
BspFNI CGCG 1 cut(s) 1732
BspHI TCATGA 2 cut(s) 1353, 2158
BspLI GGNNCC 3 cut(s) 204, 1538, 2326
BspMAI CTGCAG 2 cut(s) 559, 2317
BspOI GCTAGC 1 cut(s) 32
BspPI GGATC 3 cut(s) 2156, 2474, 2531
BspQI GCTCTTC 1 cut(s) 2192
BspT104I TTCGAA 1 cut(s) 276
BspTI CTTAAG 2 cut(s) 568, 2573
BsrBI CCGCTC 1 cut(s) 542
BsrDI GCAATG 2 cut(s) 1398, 2004
BsrFI RCCGGY 1 cut(s) 2098
BsrGI TGTACA 1 cut(s) 1602
BssAI RCCGGY 1 cut(s) 2098
BssECI CCNNGG 6 cut(s) 500, 501, 638, 1293, 1410, 1532
BssMI GATC 8 cut(s) 106, 289, 331, 1012, 1737, 2161, 2479, 2536
BssNI GRCGYC 1 cut(s) 2407
BssT1I CCWWGG 2 cut(s) 1293, 1532
Bst2UI CCWGG 5 cut(s) 640, 886, 1160, 2053, 2136
Bst4CI ACNGT 4 cut(s) 733, 922, 1252, 1663
Bst6I CTCTTC 6 cut(s) 182, 1197, 1500, 1728, 1799, 2192
BstACI GRCGYC 1 cut(s) 2407
BstAFI CTTAAG 2 cut(s) 568, 2573
BstAPI GCANNNNNTGC 3 cut(s) 1949, 2149, 2270
BstAUI TGTACA 1 cut(s) 1602
BstBI TTCGAA 1 cut(s) 276
BstC8I GCNNGC 3 cut(s) 30, 635, 2002
BstDSI CCRYGG 2 cut(s) 1293, 1410
BstF5I GGATG 8 cut(s) 198, 894, 1229, 1603, 1936, 2144, 2347, 2449
BstFNI CGCG 1 cut(s) 1732
BstH2I RGCGCY 2 cut(s) 256, 1052
BstHHI GCGC 2 cut(s) 255, 1051
BstKTI GATC 8 cut(s) 109, 292, 334, 1015, 1740, 2164, 2482, 2539
BstMAI GTCTC 3 cut(s) 268, 585, 813
BstMBI GATC 8 cut(s) 106, 289, 331, 1012, 1737, 2161, 2479, 2536
BstMWI GCNNNNNNNGC 8 cut(s) 1949, 2006, 2149, 2189, 2270, 2312, 2375, 2399
BstNI CCWGG 5 cut(s) 640, 886, 1160, 2053, 2136
BstNSI RCATGY 3 cut(s) 164, 637, 2132
BstSCI CCNGG 7 cut(s) 499, 500, 638, 884, 1158, 2051, 2134
BstSFI CTRYAG 2 cut(s) 555, 2313
BstSLI GKGCMC 2 cut(s) 2451, 2598
BstUI CGCG 1 cut(s) 1732
BstV1I GCAGC 3 cut(s) 313, 569, 2192
BstXI CCANNNNNNTGG 1 cut(s) 99
BsuRI GGCC 7 cut(s) 217, 462, 836, 1331, 1371, 1537, 1743
BtgI CCRYGG 2 cut(s) 1293, 1410
BtsCI GGATG 8 cut(s) 198, 894, 1229, 1603, 1936, 2144, 2347, 2449
BtsI GCAGTG 1 cut(s) 342
BtsIMutI CAGTG 4 cut(s) 342, 729, 1257, 1315
Cac8I GCNNGC 3 cut(s) 30, 635, 2002
CaiI CAGNNNCTG 2 cut(s) 2321, 2393
CciI TCATGA 2 cut(s) 1353, 2158
CfoI GCGC 2 cut(s) 255, 1051
Cfr10I RCCGGY 1 cut(s) 2098
Cfr13I GGNCC 3 cut(s) 1536, 2324, 2501
Cfr9I CCCGGG 1 cut(s) 500
CseI GACGC 2 cut(s) 1493, 2384
Csp6I GTAC 3 cut(s) 455, 1186, 1603
CspAI ACCGGT 1 cut(s) 2098
CviQI GTAC 3 cut(s) 455, 1186, 1603
DpnI GATC 8 cut(s) 108, 291, 333, 1014, 1739, 2163, 2481, 2538
DpnII GATC 8 cut(s) 106, 289, 331, 1012, 1737, 2161, 2479, 2536
DraI TTTAAA 1 cut(s) 1326
EaeI YGGCCR 1 cut(s) 1741
Eam1104I CTCTTC 6 cut(s) 182, 1197, 1500, 1728, 1799, 2192
EarI CTCTTC 6 cut(s) 182, 1197, 1500, 1728, 1799, 2192
EciI GGCGGA 2 cut(s) 1801, 1825
Eco130I CCWWGG 2 cut(s) 1293, 1532
Eco147I AGGCCT 2 cut(s) 217, 836
Eco32I GATATC 1 cut(s) 2106
Eco47I GGWCC 2 cut(s) 2324, 2501
Eco47III AGCGCT 2 cut(s) 254, 1050
Eco57I CTGAAG 5 cut(s) 206, 476, 999, 2189, 2370
Eco88I CYCGRG 3 cut(s) 500, 548, 2332
EcoO109I RGGNCCY 1 cut(s) 1536
EcoRII CCWGG 5 cut(s) 638, 884, 1158, 2051, 2134
EcoRV GATATC 1 cut(s) 2106
EcoT14I CCWWGG 2 cut(s) 1293, 1532
ErhI CCWWGG 2 cut(s) 1293, 1532
Esp3I CGTCTC 1 cut(s) 585
FalI AAGNNNNNCTT 4 cut(s) 218, 250, 1085, 1117
FaqI GGGAC 2 cut(s) 1010, 1947
FauNDI CATATG 2 cut(s) 121, 955
FbaI TGATCA 3 cut(s) 106, 289, 1012
FblI GTMKAC 2 cut(s) 858, 2410
Fnu4HI GCNGC 4 cut(s) 138, 302, 558, 2181
FokI GGATG 8 cut(s) 205, 901, 1216, 1610, 1943, 2151, 2354, 2456
Fsp4HI GCNGC 4 cut(s) 138, 302, 558, 2181
FspBI CTAG 5 cut(s) 29, 965, 1533, 1572, 2528
GlaI GCGC 2 cut(s) 254, 1050
GluI GCNGC 4 cut(s) 138, 302, 558, 2181
GsuI CTGGAG 2 cut(s) 189, 2118
HaeII RGCGCY 2 cut(s) 256, 1052
HaeIII GGCC 7 cut(s) 217, 462, 836, 1331, 1371, 1537, 1743
HapII CCGG 5 cut(s) 501, 869, 1694, 2099, 2279
HgaI GACGC 2 cut(s) 1493, 2384
HhaI GCGC 2 cut(s) 255, 1051
Hin1I GRCGYC 1 cut(s) 2407
Hin6I GCGC 2 cut(s) 253, 1049
HinP1I GCGC 2 cut(s) 253, 1049
HindIII AAGCTT 3 cut(s) 352, 1319, 1986
HpaII CCGG 5 cut(s) 501, 869, 1694, 2099, 2279
HphI GGTGA 7 cut(s) 116, 302, 526, 1057, 1651, 1666, 2113
Hpy188I TCNGA 6 cut(s) 25, 495, 750, 1148, 1636, 1841
Hpy99I CGWCG 1 cut(s) 75
HpyAV CCTTC 9 cut(s) 169, 228, 541, 622, 775, 1121, 1243, 2213, 2514
HpyCH4III ACNGT 4 cut(s) 733, 922, 1252, 1663
HpyCH4IV ACGT 3 cut(s) 73, 1567, 2407
HpyF10VI GCNNNNNNNGC 8 cut(s) 1949, 2006, 2149, 2189, 2270, 2312, 2375, 2399
HpySE526I ACGT 3 cut(s) 73, 1567, 2407
Hsp92I GRCGYC 1 cut(s) 2407
HspAI GCGC 2 cut(s) 253, 1049
Kpn2I TCCGGA 1 cut(s) 2278
Ksp22I TGATCA 3 cut(s) 106, 289, 1012
Kzo9I GATC 8 cut(s) 106, 289, 331, 1012, 1737, 2161, 2479, 2536
LguI GCTCTTC 1 cut(s) 2192
LmnI GCTCC 5 cut(s) 208, 810, 2137, 2390, 2495
Lsp1109I GCAGC 3 cut(s) 313, 569, 2192
LweI GCATC 9 cut(s) 486, 664, 1412, 1507, 2065, 2167, 2293, 2332, 2452
MaeI CTAG 5 cut(s) 29, 965, 1533, 1572, 2528
MaeII ACGT 3 cut(s) 73, 1567, 2407
MaeIII GTNAC 5 cut(s) 64, 598, 796, 1279, 1438
MalI GATC 8 cut(s) 108, 291, 333, 1014, 1739, 2163, 2481, 2538
MbiI CCGCTC 1 cut(s) 542
MboI GATC 8 cut(s) 106, 289, 331, 1012, 1737, 2161, 2479, 2536
MhlI GDGCHC 2 cut(s) 2451, 2598
MlyI GAGTC 7 cut(s) 560, 1283, 1344, 1625, 1631, 1639, 2495
MmeI TCCRAC 2 cut(s) 1243, 1659
MroI TCCGGA 1 cut(s) 2278
MroXI GAANNNNTTC 1 cut(s) 1061
MseI TTAA 6 cut(s) 402, 432, 467, 569, 1325, 2574
MspA1I CMGCKG 1 cut(s) 2000
MspCI CTTAAG 2 cut(s) 568, 2573
MspI CCGG 5 cut(s) 501, 869, 1694, 2099, 2279
MspR9I CCNGG 7 cut(s) 501, 502, 640, 886, 1160, 2053, 2136
Mva1269I GAATGC 2 cut(s) 1421, 2275
MvaI CCWGG 5 cut(s) 640, 886, 1160, 2053, 2136
MvnI CGCG 1 cut(s) 1732
MwoI GCNNNNNNNGC 8 cut(s) 1949, 2006, 2149, 2189, 2270, 2312, 2375, 2399
NciI CCSGG 2 cut(s) 501, 502
NcoI CCATGG 1 cut(s) 1293
NdeI CATATG 2 cut(s) 121, 955
NdeII GATC 8 cut(s) 106, 289, 331, 1012, 1737, 2161, 2479, 2536
NheI GCTAGC 1 cut(s) 28
NlaIV GGNNCC 3 cut(s) 204, 1538, 2326
NmuCI GTSAC 1 cut(s) 1438
NspI RCATGY 3 cut(s) 164, 637, 2132
NspV TTCGAA 1 cut(s) 276
PaeI GCATGC 1 cut(s) 637
PaeR7I CTCGAG 2 cut(s) 548, 2332
PagI TCATGA 2 cut(s) 1353, 2158
PceI AGGCCT 2 cut(s) 217, 836
PciI ACATGT 1 cut(s) 160
PciSI GCTCTTC 1 cut(s) 2192
PcsI WCGNNNNNNNCGW 2 cut(s) 936, 2404
PctI GAATGC 2 cut(s) 1421, 2275
PdmI GAANNNNTTC 1 cut(s) 1061
PfeI GAWTC 4 cut(s) 437, 683, 1098, 1131
PflMI CCANNNNNTGG 2 cut(s) 1299, 2546
PfoI TCCNGGA 2 cut(s) 1158, 2134
PinAI ACCGGT 1 cut(s) 2098
PkrI GCNGC 4 cut(s) 139, 303, 559, 2182
PleI GAGTC 7 cut(s) 559, 1283, 1344, 1625, 1631, 1639, 2494
PpsI GAGTC 7 cut(s) 559, 1283, 1344, 1625, 1631, 1639, 2494
PscI ACATGT 1 cut(s) 160
PsiI TTATAA 2 cut(s) 381, 1044
Psp6I CCWGG 5 cut(s) 638, 884, 1158, 2051, 2134
PspGI CCWGG 5 cut(s) 638, 884, 1158, 2051, 2134
PspN4I GGNNCC 3 cut(s) 204, 1538, 2326
PspPI GGNCC 3 cut(s) 1536, 2324, 2501
PspXI VCTCGAGB 1 cut(s) 2332
PstI CTGCAG 2 cut(s) 559, 2317
PstNI CAGNNNCTG 2 cut(s) 2321, 2393
PvuII CAGCTG 1 cut(s) 2000
RsaI GTAC 3 cut(s) 456, 1187, 1604
RsaNI GTAC 3 cut(s) 455, 1186, 1603
SapI GCTCTTC 1 cut(s) 2192
SaqAI TTAA 6 cut(s) 402, 432, 467, 569, 1325, 2574
SatI GCNGC 4 cut(s) 138, 302, 558, 2181
Sau3AI GATC 8 cut(s) 106, 289, 331, 1012, 1737, 2161, 2479, 2536
Sau96I GGNCC 3 cut(s) 1536, 2324, 2501
SchI GAGTC 7 cut(s) 560, 1283, 1344, 1625, 1631, 1639, 2495
ScrFI CCNGG 7 cut(s) 501, 502, 640, 886, 1160, 2053, 2136
SduI GDGCHC 2 cut(s) 2451, 2598
SfaNI GCATC 9 cut(s) 486, 664, 1412, 1507, 2065, 2167, 2293, 2332, 2452
SfcI CTRYAG 2 cut(s) 555, 2313
Sfr274I CTCGAG 2 cut(s) 548, 2332
SfuI TTCGAA 1 cut(s) 276
SinI GGWCC 2 cut(s) 2324, 2501
SlaI CTCGAG 2 cut(s) 548, 2332
SmaI CCCGGG 1 cut(s) 502
SmlI CTYRAG 7 cut(s) 548, 568, 1625, 2166, 2332, 2509, 2573
SmoI CTYRAG 7 cut(s) 548, 568, 1625, 2166, 2332, 2509, 2573
SphI GCATGC 1 cut(s) 637
SseBI AGGCCT 2 cut(s) 217, 836
SsiI CCGC 9 cut(s) 137, 540, 565, 1108, 1677, 1730, 1756, 1786, 1810
SspI AATATT 1 cut(s) 875
SspMI CTAG 5 cut(s) 29, 965, 1533, 1572, 2528
StuI AGGCCT 2 cut(s) 217, 836
StyD4I CCNGG 7 cut(s) 499, 500, 638, 884, 1158, 2051, 2134
StyI CCWWGG 2 cut(s) 1293, 1532
TaaI ACNGT 4 cut(s) 733, 922, 1252, 1663
TaiI ACGT 3 cut(s) 76, 1570, 2410
TatI WGTACW 3 cut(s) 454, 1185, 1602
TauI GCSGC 1 cut(s) 140
TfiI GAWTC 4 cut(s) 437, 683, 1098, 1131
Tru1I TTAA 6 cut(s) 402, 432, 467, 569, 1325, 2574
Tru9I TTAA 6 cut(s) 402, 432, 467, 569, 1325, 2574
TscAI CASTG 4 cut(s) 349, 736, 1257, 1315
TseFI GTSAC 1 cut(s) 1438
TseI GCWGC 3 cut(s) 301, 557, 2180
Tsp45I GTSAC 1 cut(s) 1438
TspMI CCCGGG 1 cut(s) 500
TspRI CASTG 4 cut(s) 349, 736, 1257, 1315
Van91I CCANNNNNTGG 2 cut(s) 1299, 2546
Vha464I CTTAAG 2 cut(s) 568, 2573
VpaK11BI GGWCC 2 cut(s) 2324, 2501
XapI RAATTY 5 cut(s) 294, 706, 741, 1057, 1578
XceI RCATGY 3 cut(s) 164, 637, 2132
XhoI CTCGAG 2 cut(s) 548, 2332
XmaI CCCGGG 1 cut(s) 500
XmaJI CCTAGG 1 cut(s) 1532
XmiI GTMKAC 2 cut(s) 858, 2410
XmnI GAANNNNTTC 1 cut(s) 1061
XspI CTAG 5 cut(s) 29, 965, 1533, 1572, 2528
ZraI GACGTC 1 cut(s) 2408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.