MD11G1236500.v1.1

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000053
Physical Location & Seq
Reverse (-)
34400139 .. 34402942
2804 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1236500.v1.1.491

Sequence Viewer

Length: 1320 bp
ATGGCGGAGAAAACTCTCCGTTTTCGGTTGGTTAGACAACAAGGTTTTAAGCTAGCAGACATGTTCAATAAGTTCAAGGACGTCCATGGAAAATTCAAGGAATCACTTGCAACTGATGCAGTACGGCTATTAAGCTTGTTCGAAGCCGCACATGTTAGAGTTCACGGAGAGGACTTGCTAGATGAAGCACTAACTTTCACCACCGCTCATCTTGAATCTTCGATTGAAGCGCACCGTTTAAGTTCGTTACTTTCGAAACAAGTAACTCATGCCTTGTATCAACCATTTCGGAAGGGCTTCACTAGGCTAGAAGCAAGGAGTTACTTGTCTATTTATGAAGAACGTGGTCATTCAGTAAATCAAACTCTCCTAACTTTTGCAAAGTTGGACTTCAATCTGTTGCAGCAAGTCCATCAGAAAGAATTAAGTGAAATTACAAGGTGGTGGAAGGATTTGGACTTTGTAAACAAATTACCTTTTATAAGAAATAGAGTGGTTGAATGCTACTTTTGGGCATTGGGAGTCTTCTTCGAGCCGGAGCATTACTTTGCTAGGAGAATATTCTACAAAGCTATTGCTATGATTACCACTATTGATGACATTTATGATGCGTATGGAATATATGCAGAACTAGAACTGTTTACTAAAGCTGTTGAAAGGTGGGATATCTCAGTCATGGACCAACTGTCGGAGTATATGAAAGTCTGTTATCAAGCTATGTTGGATGAACATATTGAAATCGAAGAAAAGCTTACAAAAGAGGGGAAGTTATATGGCATTCATTATGCGACAGAAGCAATGAAGGTTCTGGTTCGAGCTTACTTCGAGAAAGCCAAATGGTTGCACCAAAATTACACACCAAAAATGGATGAATATATGTCGGTAGCACTTACCACGTCCTACTTTCTGCTATCAGTCGTGTCATTTGCTGGAATGGCAGATATTGTGATAAAAGACTCCTTGGACTGGATTTTCAATGACTCTAAGAGTTTTCACGCTTTATTACTACTTGGCAGACTCATGGATGACATGAAATCCCACAAGAGGACATATTGCATCGGCTGTGGAATGCTACATGACCTAACATGGTGCCACAGAAGAAGAAACAACACTCGAATTCACCAAACAGGTGATGATGCATGGAAGGACATAAACGAAGAATGGCTGATTCCCACCATTCCTAGGCCCCTTCTGTTGCGAATTCTCAATCTTGCACGTGCAAATGTAGTTATATACAAGTATGAAGATGGCTTTACTCATGCCGAACTAGTGCTTAAGGATTCCATTGTTCCTTTGTTTGTCGATCCCGTGCCCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

440

Amino Acids

51.56

Weight (kDa)

6.53

Isoelectric Point (pI)

42.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 5 - 92 2e-25 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 150 - 350 2.2e-72 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 190 - 388 4.4e-33 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 482
AatII GACGTC 1 cut(s) 84
AccB1I GGYRCC 1 cut(s) 1089
AccBSI CCGCTC 1 cut(s) 206
AciI CCGC 3 cut(s) 5, 147, 204
AclWI GGATC 1 cut(s) 1298
AcsI RAATTY 3 cut(s) 92, 1116, 1200
AcvI CACGTG 1 cut(s) 1217
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 1 cut(s) 123
AfiI CCNNNNNNNGG 4 cut(s) 688, 966, 1044, 1182
AflII CTTAAG 1 cut(s) 1274
AflIII ACRYGT 2 cut(s) 60, 151
AhdI GACNNNNNGTC 1 cut(s) 685
AhlI ACTAGT 1 cut(s) 1267
AjiI CACGTC 1 cut(s) 897
AluBI AGCT 7 cut(s) 52, 135, 572, 650, 716, 751, 818
AluI AGCT 7 cut(s) 52, 135, 572, 650, 716, 751, 818
AlwI GGATC 1 cut(s) 1298
AoxI GGCC 1 cut(s) 1184
ApeKI GCWGC 1 cut(s) 403
ApoI RAATTY 3 cut(s) 92, 1116, 1200
Asp700I GAANNNNTTC 1 cut(s) 296
AspA2I CCTAGG 1 cut(s) 1181
AspLEI GCGC 1 cut(s) 232
AspS9I GGNCC 2 cut(s) 679, 1185
AsuHPI GGTGA 3 cut(s) 190, 1112, 1142
AsuII TTCGAA 2 cut(s) 141, 254
AsuNHI GCTAGC 1 cut(s) 52
AvaII GGWCC 1 cut(s) 679
AvrII CCTAGG 1 cut(s) 1181
BaeGI GKGCMC 1 cut(s) 1314
BanI GGYRCC 1 cut(s) 1089
BbrPI CACGTG 1 cut(s) 1217
BbsI GAAGAC 1 cut(s) 517
BbvI GCAGC 1 cut(s) 415
BccI CCATC 2 cut(s) 420, 1241
BceAI ACGGC 1 cut(s) 140
BcuI ACTAGT 1 cut(s) 1267
BfaI CTAG 8 cut(s) 53, 179, 303, 308, 552, 632, 1182, 1268
BfrI CTTAAG 1 cut(s) 1274
BisI GCNGC 2 cut(s) 147, 404
BlnI CCTAGG 1 cut(s) 1181
BlsI GCNGC 2 cut(s) 148, 405
Bme18I GGWCC 1 cut(s) 679
BmeRI GACNNNNNGTC 1 cut(s) 685
BmgBI CACGTC 1 cut(s) 897
BmgT120I GGNCC 2 cut(s) 679, 1185
BmiI GGNNCC 2 cut(s) 1091, 1187
BmsI GCATC 4 cut(s) 106, 598, 1065, 1126
BmtI GCTAGC 1 cut(s) 56
BpiI GAAGAC 1 cut(s) 517
Bpu14I TTCGAA 2 cut(s) 141, 254
BsaAI YACGTR 1 cut(s) 1217
BsaHI GRCGYC 1 cut(s) 81
BsaJI CCNNGG 3 cut(s) 85, 960, 1181
Bsc4I CCNNNNNNNGG 4 cut(s) 688, 966, 1044, 1182
Bse1I ACTGG 1 cut(s) 971
Bse3DI GCAATG 1 cut(s) 804
BseDI CCNNGG 3 cut(s) 85, 960, 1181
BseGI GGATG 3 cut(s) 730, 874, 1030
BseLI CCNNNNNNNGG 4 cut(s) 688, 966, 1044, 1182
BseMI GCAATG 1 cut(s) 804
BseMII CTCAG 1 cut(s) 684
BseNI ACTGG 1 cut(s) 971
BseSI GKGCMC 1 cut(s) 1314
BseXI GCAGC 1 cut(s) 415
BshFI GGCC 1 cut(s) 1186
BshNI GGYRCC 1 cut(s) 1089
BsiSI CCGG 1 cut(s) 536
BslI CCNNNNNNNGG 4 cut(s) 688, 966, 1044, 1182
BsmI GAATGC 3 cut(s) 506, 777, 1074
BsnI GGCC 1 cut(s) 1186
Bsp119I TTCGAA 2 cut(s) 141, 254
Bsp1286I GDGCHC 1 cut(s) 1314
Bsp143I GATC 1 cut(s) 1303
Bsp19I CCATGG 1 cut(s) 85
BspACI CCGC 3 cut(s) 5, 147, 204
BspANI GGCC 1 cut(s) 1186
BspCNI CTCAG 1 cut(s) 683
BspLI GGNNCC 2 cut(s) 1091, 1187
BspOI GCTAGC 1 cut(s) 56
BspPI GGATC 1 cut(s) 1298
BspT104I TTCGAA 2 cut(s) 141, 254
BspT107I GGYRCC 1 cut(s) 1089
BspTI CTTAAG 1 cut(s) 1274
BsrBI CCGCTC 1 cut(s) 206
BsrDI GCAATG 1 cut(s) 804
BsrI ACTGG 1 cut(s) 971
BssECI CCNNGG 3 cut(s) 85, 960, 1181
BssMI GATC 1 cut(s) 1303
BssNI GRCGYC 1 cut(s) 81
BssT1I CCWWGG 3 cut(s) 85, 960, 1181
Bst4CI ACNGT 3 cut(s) 236, 639, 687
BstACI GRCGYC 1 cut(s) 81
BstAFI CTTAAG 1 cut(s) 1274
BstAPI GCANNNNNTGC 1 cut(s) 116
BstBAI YACGTR 1 cut(s) 1217
BstBI TTCGAA 2 cut(s) 141, 254
BstC8I GCNNGC 1 cut(s) 54
BstDEI CTNAG 2 cut(s) 670, 984
BstDSI CCRYGG 1 cut(s) 85
BstF5I GGATG 3 cut(s) 730, 874, 1030
BstHHI GCGC 1 cut(s) 232
BstKTI GATC 1 cut(s) 1306
BstMBI GATC 1 cut(s) 1303
BstMWI GCNNNNNNNGC 3 cut(s) 116, 794, 935
BstNSI RCATGY 2 cut(s) 64, 155
BstSLI GKGCMC 1 cut(s) 1314
BstV1I GCAGC 1 cut(s) 415
BstV2I GAAGAC 1 cut(s) 517
BsuRI GGCC 1 cut(s) 1186
BtgI CCRYGG 1 cut(s) 85
BtrI CACGTC 1 cut(s) 897
BtsCI GGATG 3 cut(s) 730, 874, 1030
Cac8I GCNNGC 1 cut(s) 54
CfoI GCGC 1 cut(s) 232
Cfr13I GGNCC 2 cut(s) 679, 1185
Csp6I GTAC 1 cut(s) 122
CviQI GTAC 1 cut(s) 122
DdeI CTNAG 2 cut(s) 670, 984
DpnI GATC 1 cut(s) 1305
DpnII GATC 1 cut(s) 1303
DriI GACNNNNNGTC 1 cut(s) 685
Eam1105I GACNNNNNGTC 1 cut(s) 685
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 3 cut(s) 85, 960, 1181
Eco32I GATATC 1 cut(s) 667
Eco47I GGWCC 1 cut(s) 679
Eco72I CACGTG 1 cut(s) 1217
EcoO109I RGGNCCY 1 cut(s) 1185
EcoRI GAATTC 2 cut(s) 1116, 1200
EcoRV GATATC 1 cut(s) 667
EcoT14I CCWWGG 3 cut(s) 85, 960, 1181
EcoT22I ATGCAT 1 cut(s) 1141
ErhI CCWWGG 3 cut(s) 85, 960, 1181
FalI AAGNNNNNCTT 4 cut(s) 374, 406, 735, 767
Fnu4HI GCNGC 2 cut(s) 147, 404
FokI GGATG 3 cut(s) 737, 881, 1037
Fsp4HI GCNGC 2 cut(s) 147, 404
FspBI CTAG 8 cut(s) 53, 179, 303, 308, 552, 632, 1182, 1268
GlaI GCGC 1 cut(s) 231
GluI GCNGC 2 cut(s) 147, 404
HaeIII GGCC 1 cut(s) 1186
HapII CCGG 1 cut(s) 536
HhaI GCGC 1 cut(s) 232
Hin1I GRCGYC 1 cut(s) 81
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HindIII AAGCTT 2 cut(s) 133, 749
HinfI GANTC 8 cut(s) 101, 215, 522, 956, 980, 1017, 1168, 1280
HpaII CCGG 1 cut(s) 536
HphI GGTGA 3 cut(s) 190, 1112, 1142
Hpy166II GTNNAC 3 cut(s) 163, 466, 642
Hpy188I TCNGA 3 cut(s) 291, 417, 691
Hpy188III TCNNGA 2 cut(s) 212, 826
Hpy8I GTNNAC 3 cut(s) 163, 466, 642
HpyAV CCTTC 5 cut(s) 286, 442, 796, 1138, 1199
HpyCH4III ACNGT 3 cut(s) 236, 639, 687
HpyCH4IV ACGT 4 cut(s) 81, 343, 896, 1216
HpyF10VI GCNNNNNNNGC 3 cut(s) 116, 794, 935
HpyF3I CTNAG 2 cut(s) 670, 984
HpySE526I ACGT 4 cut(s) 81, 343, 896, 1216
Hsp92I GRCGYC 1 cut(s) 81
HspAI GCGC 1 cut(s) 230
Kzo9I GATC 1 cut(s) 1303
LmnI GCTCC 1 cut(s) 538
LpnPI CCDG 5 cut(s) 549, 794, 915, 952, 1113
Lsp1109I GCAGC 1 cut(s) 415
LweI GCATC 4 cut(s) 106, 598, 1065, 1126
MaeI CTAG 8 cut(s) 53, 179, 303, 308, 552, 632, 1182, 1268
MaeII ACGT 4 cut(s) 81, 343, 896, 1216
MaeIII GTNAC 3 cut(s) 246, 262, 320
MalI GATC 1 cut(s) 1305
MbiI CCGCTC 1 cut(s) 206
MboI GATC 1 cut(s) 1303
MboII GAAGA 9 cut(s) 210, 350, 517, 520, 755, 1110, 1113, 1169, 1256
MhlI GDGCHC 1 cut(s) 1314
MluCI AATT 7 cut(s) 92, 422, 432, 470, 850, 1116, 1200
MlyI GAGTC 4 cut(s) 531, 950, 974, 1011
MmeI TCCRAC 3 cut(s) 366, 669, 702
MnlI CCTC 3 cut(s) 163, 754, 1038
Mph1103I ATGCAT 1 cut(s) 1141
MroXI GAANNNNTTC 1 cut(s) 296
MseI TTAA 5 cut(s) 48, 131, 239, 425, 1275
MspCI CTTAAG 1 cut(s) 1274
MspI CCGG 1 cut(s) 536
Mva1269I GAATGC 3 cut(s) 506, 777, 1074
MwoI GCNNNNNNNGC 3 cut(s) 116, 794, 935
NcoI CCATGG 1 cut(s) 85
NdeII GATC 1 cut(s) 1303
NheI GCTAGC 1 cut(s) 52
NlaIV GGNNCC 2 cut(s) 1091, 1187
NsiI ATGCAT 1 cut(s) 1141
NspI RCATGY 2 cut(s) 64, 155
NspV TTCGAA 2 cut(s) 141, 254
PciI ACATGT 2 cut(s) 60, 151
PcsI WCGNNNNNNNCGW 1 cut(s) 251
PctI GAATGC 3 cut(s) 506, 777, 1074
PdmI GAANNNNTTC 1 cut(s) 296
PfeI GAWTC 4 cut(s) 101, 215, 1168, 1280
PkrI GCNGC 2 cut(s) 148, 405
PleI GAGTC 4 cut(s) 530, 950, 974, 1011
PmaCI CACGTG 1 cut(s) 1217
PmlI CACGTG 1 cut(s) 1217
PpsI GAGTC 4 cut(s) 530, 950, 974, 1011
Ppu21I YACGTR 1 cut(s) 1217
PscI ACATGT 2 cut(s) 60, 151
PsiI TTATAA 1 cut(s) 482
PspCI CACGTG 1 cut(s) 1217
PspN4I GGNNCC 2 cut(s) 1091, 1187
PspPI GGNCC 2 cut(s) 679, 1185
RsaI GTAC 1 cut(s) 123
RsaNI GTAC 1 cut(s) 122
SaqAI TTAA 5 cut(s) 48, 131, 239, 425, 1275
SatI GCNGC 2 cut(s) 147, 404
Sau3AI GATC 1 cut(s) 1303
Sau96I GGNCC 2 cut(s) 679, 1185
SchI GAGTC 4 cut(s) 531, 950, 974, 1011
SduI GDGCHC 1 cut(s) 1314
SfaNI GCATC 4 cut(s) 106, 598, 1065, 1126
SfuI TTCGAA 2 cut(s) 141, 254
SinI GGWCC 1 cut(s) 679
SmlI CTYRAG 1 cut(s) 1274
SmoI CTYRAG 1 cut(s) 1274
SpeI ACTAGT 1 cut(s) 1267
Sse9I AATT 7 cut(s) 92, 422, 432, 470, 850, 1116, 1200
SsiI CCGC 3 cut(s) 5, 147, 204
SspI AATATT 1 cut(s) 561
SspMI CTAG 8 cut(s) 53, 179, 303, 308, 552, 632, 1182, 1268
StyI CCWWGG 3 cut(s) 85, 960, 1181
TaaI ACNGT 3 cut(s) 236, 639, 687
TaiI ACGT 4 cut(s) 84, 346, 899, 1219
TaqI TCGA 9 cut(s) 141, 221, 254, 531, 741, 814, 825, 1114, 1302
TasI AATT 7 cut(s) 92, 422, 432, 470, 850, 1116, 1200
TauI GCSGC 1 cut(s) 149
TfiI GAWTC 4 cut(s) 101, 215, 1168, 1280
Tru1I TTAA 5 cut(s) 48, 131, 239, 425, 1275
Tru9I TTAA 5 cut(s) 48, 131, 239, 425, 1275
TseI GCWGC 1 cut(s) 403
TspDTI ATGAA 9 cut(s) 198, 351, 713, 741, 770, 815, 885, 1046, 1257
TspGWI ACGGA 2 cut(s) 8, 180
Vha464I CTTAAG 1 cut(s) 1274
VpaK11BI GGWCC 1 cut(s) 679
XapI RAATTY 3 cut(s) 92, 1116, 1200
XceI RCATGY 2 cut(s) 64, 155
XmaJI CCTAGG 1 cut(s) 1181
XmnI GAANNNNTTC 1 cut(s) 296
XspI CTAG 8 cut(s) 53, 179, 303, 308, 552, 632, 1182, 1268
ZraI GACGTC 1 cut(s) 82
Zsp2I ATGCAT 1 cut(s) 1141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.