Rh7BG383200

synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
41458148 .. 41461385
3238 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG383200.1

Sequence Viewer

Length: 1713 bp
ATGTCTGCTAAATTAGTTTCAACATACCAAGCTCAAACCCCAAATGGCAGGAGTACTCCTGATGTTAATCGACGTTCAGCTAATTATTCTCCCAGCATTTGGGGCGATCATTTTCTGTCATATGCTTCTATGGAAACTGCAAGCGATGAAAGCGAGCAACGGGTCCAAGAATTGAAGGAAGAAGTGAAGAGGATGCTTATAATGGCTCCAACTTCACAAGAATTAAATTTAATTGATGAAATTCAACGCTTAGGAGTGTCCTACCATTTTGAAAATGAGATTCACCAAATGCTCCAGAAAATTCACAACTCTTCCTATGATGACCAAAAAAATAATGATGATGATGAGCTTTACACAATAGCTCTACGTTTTCGATTGCTTAGACAACAAGGTTTTGAGGTTTCATGCAAGATGTTCAGCAAGTTCATCGATGTTGATGGGAAATTTAAGAGATCACTTGTCACTGATGTGGAAGGAATTTTAAGCTTGTATGAAGCCACACATCTTAGGACACACGGAGAGGATATACTAGAAGCCGCCCTGGCCTTCACTACCACTCATCTTGAGTTGGCAGTAACTGCTGCACAGGGTGGTCTAAGTCCACCACTTCTAAAACGAGTAACTCATGCCTTATACCAGCCACTGTGGAAGGGCTACCCAAGGCTAGAAGCAAGGCGCTACTTGTCTTTCTGCCGGGAACTAAAAAGTTCAGATATCAATGAAACACTCCTGACTTTTGCGAAGTTGGATTTCAATCAATTGCAGCGAGTCCATCAAAAAGAACTAAGTTATATCACAAGGTGGTGGAAGGAGCTGGATTTTGTGAACAAATTACCTTTTGCAAGAGATAGAGTAGTTGAAAGCTACTTTTGGGCTTTAGGAGTCTACTTTGAGCCCGAATATTGCTTTGGTAGGATGACATTGTGCAAAATTGTCGCCTTAATCGTGGTTCTTGATGACGTTTATGATGTGCATGGCACACATGAAGAATTAGAGCTTTTTACTGAAGCTGTTGAGAGGTGGGACATCTCTGCATTGGTACTACTACCTGCAGATTACATGAAAATCTGTTACCAGGCACTCTTGGACATCTACGCTGATATTGAAAATGAGCTTGCGAAGGAGGGGAAGTTGTATCGCATCCACTATGCCAGAGAATCAATGAAAGTTCAAGTCAGATCTTGGTTTCAAGAAGCCAAATGGTTCCATGAGAAATACACTCCAACGTTGGATGAATATATGTCAGCCGCTCTTTCCACAACCTATTTCATGATGGCAACCACATCCTTTGTTTTAATGGCCGGAGATATTGTCACAAAAAATTCCTTGGATTGGGTGTTCACCGACCCAAAGATGGTAAAGGCTTCATCAACAATAGGCAGACTCATGGATGACTTGCAATCCCACAAGTTTGAGCAAAAGAGAGGACATGTTGCCTCAGCTATTGAATGCTACATGAAAGAACATTGTGCCACAGAAGAAGAAGCAACAATCGAACTTACTAAACAAGTGAATAATGCATGGAAAGACATGAATGAAGGATGGCTCAACTCCGCCGGTGCTACTAATGTCCCTAGGCCACTATTACTGCGCATTATCAACCTTGCACGTGTGATCGAAGTTATATATAAGCATGAAGATGGATTCACTCATGCTGAAACTGGGCTTAAGGATATTATAACGTCTCTGCTTGTCGAACCTGTACCTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

570

Amino Acids

65.91

Weight (kDa)

5.48

Isoelectric Point (pI)

47.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 33 - 211 1.4e-59 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 270 - 510 2.3e-96 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 310 - 510 5.2e-57 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 200, 1679
Acc16I TGCGCA 1 cut(s) 1592
Acc36I ACCTGC 1 cut(s) 1057
AccB7I CCANNNNNTGG 1 cut(s) 99
AccBSI CCGCTC 1 cut(s) 1250
AccI GTMKAC 1 cut(s) 885
AciI CCGC 3 cut(s) 537, 1248, 1554
AclI AACGTT 1 cut(s) 1226
AcoI YGGCCR 1 cut(s) 1299
AcsI RAATTY 6 cut(s) 226, 240, 300, 443, 477, 1321
AcuI CTGAAG 1 cut(s) 1026
AcvI CACGTG 1 cut(s) 1610
AdeI CACNNNGTG 2 cut(s) 590, 801
AfaI GTAC 3 cut(s) 55, 1041, 1704
AfiI CCNNNNNNNGG 3 cut(s) 99, 1332, 1354
AflII CTTAAG 1 cut(s) 1667
AflIII ACRYGT 2 cut(s) 1429, 1609
AjnI CCWGG 2 cut(s) 540, 1074
AjuI GAANNNNNNNTTGG 2 cut(s) 891, 923
AleI CACNNNNGTG 1 cut(s) 467
AloI GAACNNNNNNTCC 2 cut(s) 1322, 1354
Alw26I GTCTC 1 cut(s) 1689
AlwNI CAGNNNCTG 2 cut(s) 578, 643
AoxI GGCC 3 cut(s) 543, 1299, 1577
ApeKI GCWGC 2 cut(s) 581, 763
ApoI RAATTY 6 cut(s) 226, 240, 300, 443, 477, 1321
AspA2I CCTAGG 1 cut(s) 1574
AspLEI GCGC 2 cut(s) 678, 1593
AspS9I GGNCC 1 cut(s) 163
AsuC2I CCSGG 1 cut(s) 695
AsuHPI GGTGA 2 cut(s) 275, 1333
AvaII GGWCC 1 cut(s) 163
AvrII CCTAGG 1 cut(s) 1574
BanII GRGCYC 1 cut(s) 897
BbrPI CACGTG 1 cut(s) 1610
BbvCI CCTCAGC 1 cut(s) 1438
BbvI GCAGC 2 cut(s) 568, 775
BccI CCATC 6 cut(s) 431, 780, 1267, 1348, 1536, 1634
BcgI CGANNNNNNTGC 4 cut(s) 409, 443, 916, 950
BciT130I CCWGG 2 cut(s) 542, 1076
BcnI CCSGG 1 cut(s) 695
BcoDI GTCTC 1 cut(s) 1689
BfaI CTAG 3 cut(s) 530, 665, 1575
BfmI CTRYAG 1 cut(s) 1050
BfoI RGCGCY 1 cut(s) 679
BfrI CTTAAG 1 cut(s) 1667
BfuAI ACCTGC 1 cut(s) 1057
BglI GCCNNNNNGGC 1 cut(s) 542
BglII AGATCT 1 cut(s) 1178
BisI GCNGC 4 cut(s) 537, 582, 764, 1248
BlnI CCTAGG 1 cut(s) 1574
BlsI GCNGC 4 cut(s) 538, 583, 765, 1249
BmcAI AGTACT 1 cut(s) 55
Bme1390I CCNGG 3 cut(s) 542, 695, 1076
Bme18I GGWCC 1 cut(s) 163
BmgT120I GGNCC 1 cut(s) 163
BmiI GGNNCC 3 cut(s) 164, 207, 1205
BmrFI CCNGG 3 cut(s) 542, 695, 1076
BmrI ACTGGG 1 cut(s) 1671
BmsI GCATC 2 cut(s) 183, 1149
BmuI ACTGGG 1 cut(s) 1671
BpmI CTGGAG 1 cut(s) 278
Bpu10I CCTNAGC 2 cut(s) 250, 1438
BpuEI CTTGAG 1 cut(s) 584
BpuMI CCSGG 1 cut(s) 695
Bsa29I ATCGAT 1 cut(s) 429
BsaAI YACGTR 1 cut(s) 1610
BsaBI GATNNNNATC 2 cut(s) 66, 753
BsaJI CCNNGG 4 cut(s) 540, 659, 1326, 1574
BsaXI ACNNNNNCTCC 4 cut(s) 1115, 1145, 1296, 1326
Bsc4I CCNNNNNNNGG 3 cut(s) 99, 1332, 1354
Bse118I RCCGGY 1 cut(s) 1556
Bse1I ACTGG 1 cut(s) 1666
Bse8I GATNNNNATC 2 cut(s) 66, 753
BseBI CCWGG 2 cut(s) 542, 1076
BseCI ATCGAT 1 cut(s) 429
BseDI CCNNGG 4 cut(s) 540, 659, 1326, 1574
BseGI GGATG 7 cut(s) 198, 921, 1140, 1237, 1283, 1396, 1547
BseJI GATNNNNATC 2 cut(s) 66, 753
BseLI CCNNNNNNNGG 3 cut(s) 99, 1332, 1354
BseMII CTCAG 1 cut(s) 1452
BseNI ACTGG 1 cut(s) 1666
BseXI GCAGC 2 cut(s) 568, 775
BseYI CCCAGC 1 cut(s) 92
BsgI GTGCAG 1 cut(s) 567
BshFI GGCC 3 cut(s) 545, 1301, 1579
BshVI ATCGAT 1 cut(s) 429
BsiSI CCGG 3 cut(s) 694, 1302, 1557
BslFI GGGAC 2 cut(s) 1037, 1556
BslI CCNNNNNNNGG 3 cut(s) 99, 1332, 1354
BsmAI GTCTC 1 cut(s) 1689
BsmBI CGTCTC 1 cut(s) 1689
BsmFI GGGAC 2 cut(s) 1037, 1556
BsmI GAATGC 1 cut(s) 1454
BsnI GGCC 3 cut(s) 545, 1301, 1579
Bsp1286I GDGCHC 1 cut(s) 897
Bsp143I GATC 4 cut(s) 106, 452, 1178, 1614
BspACI CCGC 3 cut(s) 537, 1248, 1554
BspANI GGCC 3 cut(s) 545, 1301, 1579
BspCNI CTCAG 1 cut(s) 1451
BspDI ATCGAT 1 cut(s) 429
BspHI TCATGA 1 cut(s) 1269
BspLI GGNNCC 3 cut(s) 164, 207, 1205
BspMAI CTGCAG 1 cut(s) 1054
BspMI ACCTGC 1 cut(s) 1057
BspTI CTTAAG 1 cut(s) 1667
BsrBI CCGCTC 1 cut(s) 1250
BsrFI RCCGGY 1 cut(s) 1556
BsrI ACTGG 1 cut(s) 1666
BssAI RCCGGY 1 cut(s) 1556
BssECI CCNNGG 4 cut(s) 540, 659, 1326, 1574
BssMI GATC 4 cut(s) 106, 452, 1178, 1614
BssT1I CCWWGG 3 cut(s) 659, 1326, 1574
Bst2UI CCWGG 2 cut(s) 542, 1076
Bst4CI ACNGT 1 cut(s) 645
Bst6I CTCTTC 2 cut(s) 182, 316
BstAFI CTTAAG 1 cut(s) 1667
BstAPI GCANNNNNTGC 1 cut(s) 578
BstBAI YACGTR 1 cut(s) 1610
BstC8I GCNNGC 3 cut(s) 142, 155, 1116
BstDEI CTNAG 6 cut(s) 250, 380, 506, 596, 785, 1438
BstF5I GGATG 7 cut(s) 198, 921, 1140, 1237, 1283, 1396, 1547
BstH2I RGCGCY 1 cut(s) 679
BstHHI GCGC 2 cut(s) 678, 1593
BstKTI GATC 4 cut(s) 109, 455, 1181, 1617
BstMAI GTCTC 1 cut(s) 1689
BstMBI GATC 4 cut(s) 106, 452, 1178, 1614
BstMWI GCNNNNNNNGC 4 cut(s) 102, 150, 542, 578
BstNI CCWGG 2 cut(s) 542, 1076
BstNSI RCATGY 1 cut(s) 1433
BstSCI CCNGG 3 cut(s) 540, 693, 1074
BstSFI CTRYAG 1 cut(s) 1050
BstV1I GCAGC 2 cut(s) 568, 775
BstX2I RGATCY 1 cut(s) 1178
BstYI RGATCY 1 cut(s) 1178
Bsu15I ATCGAT 1 cut(s) 429
BsuRI GGCC 3 cut(s) 545, 1301, 1579
BsuTUI ATCGAT 1 cut(s) 429
BtgZI GCGATG 1 cut(s) 159
BtsCI GGATG 7 cut(s) 198, 921, 1140, 1237, 1283, 1396, 1547
BtsIMutI CAGTG 2 cut(s) 462, 641
BveI ACCTGC 1 cut(s) 1057
Cac8I GCNNGC 3 cut(s) 142, 155, 1116
CaiI CAGNNNCTG 2 cut(s) 578, 643
CciI TCATGA 1 cut(s) 1269
CfoI GCGC 2 cut(s) 678, 1593
Cfr10I RCCGGY 1 cut(s) 1556
Cfr13I GGNCC 1 cut(s) 163
ClaI ATCGAT 1 cut(s) 429
Csp6I GTAC 3 cut(s) 54, 1040, 1703
CspCI CAANNNNNGTGG 4 cut(s) 544, 579, 1270, 1305
CviQI GTAC 3 cut(s) 54, 1040, 1703
DdeI CTNAG 6 cut(s) 250, 380, 506, 596, 785, 1438
DpnI GATC 4 cut(s) 108, 454, 1180, 1616
DpnII GATC 4 cut(s) 106, 452, 1178, 1614
DraIII CACNNNGTG 2 cut(s) 590, 801
EaeI YGGCCR 1 cut(s) 1299
Eam1104I CTCTTC 2 cut(s) 182, 316
EarI CTCTTC 2 cut(s) 182, 316
EciI GGCGGA 1 cut(s) 1543
Eco130I CCWWGG 3 cut(s) 659, 1326, 1574
Eco24I GRGCYC 1 cut(s) 897
Eco32I GATATC 1 cut(s) 715
Eco47I GGWCC 1 cut(s) 163
Eco57I CTGAAG 1 cut(s) 1026
Eco72I CACGTG 1 cut(s) 1610
EcoRII CCWGG 2 cut(s) 540, 1074
EcoRV GATATC 1 cut(s) 715
EcoT14I CCWWGG 3 cut(s) 659, 1326, 1574
EcoT22I ATGCAT 1 cut(s) 1522
EcoT38I GRGCYC 1 cut(s) 897
ErhI CCWWGG 3 cut(s) 659, 1326, 1574
Esp3I CGTCTC 1 cut(s) 1689
FaqI GGGAC 2 cut(s) 1037, 1556
FauNDI CATATG 1 cut(s) 121
FblI GTMKAC 1 cut(s) 885
Fnu4HI GCNGC 4 cut(s) 537, 582, 764, 1248
FokI GGATG 7 cut(s) 205, 928, 1127, 1244, 1270, 1403, 1554
FriOI GRGCYC 1 cut(s) 897
Fsp4HI GCNGC 4 cut(s) 537, 582, 764, 1248
FspBI CTAG 3 cut(s) 530, 665, 1575
FspI TGCGCA 1 cut(s) 1592
GlaI GCGC 2 cut(s) 677, 1592
GluI GCNGC 4 cut(s) 537, 582, 764, 1248
GsaI CCCAGC 1 cut(s) 96
GsuI CTGGAG 1 cut(s) 278
HaeII RGCGCY 1 cut(s) 679
HaeIII GGCC 3 cut(s) 545, 1301, 1579
HapII CCGG 3 cut(s) 694, 1302, 1557
HhaI GCGC 2 cut(s) 678, 1593
Hin6I GCGC 2 cut(s) 676, 1591
HinP1I GCGC 2 cut(s) 676, 1591
HindIII AAGCTT 1 cut(s) 484
HinfI GANTC 6 cut(s) 280, 768, 882, 1157, 1383, 1644
HpaII CCGG 3 cut(s) 694, 1302, 1557
HphI GGTGA 2 cut(s) 275, 1333
Hpy166II GTNNAC 4 cut(s) 602, 826, 886, 1341
Hpy188I TCNGA 2 cut(s) 712, 1178
Hpy188III TCNNGA 7 cut(s) 59, 295, 563, 730, 953, 1190, 1270
Hpy8I GTNNAC 4 cut(s) 602, 826, 886, 1341
Hpy99I CGWCG 1 cut(s) 75
HpyAV CCTTC 7 cut(s) 169, 467, 556, 643, 802, 1114, 1532
HpyCH4III ACNGT 1 cut(s) 645
HpyCH4IV ACGT 6 cut(s) 73, 367, 960, 1226, 1609, 1682
HpyF10VI GCNNNNNNNGC 4 cut(s) 102, 150, 542, 578
HpyF3I CTNAG 6 cut(s) 250, 380, 506, 596, 785, 1438
HpySE526I ACGT 6 cut(s) 73, 367, 960, 1226, 1609, 1682
HspAI GCGC 2 cut(s) 676, 1591
Kzo9I GATC 4 cut(s) 106, 452, 1178, 1614
LmnI GCTCC 3 cut(s) 211, 297, 811
Lsp1109I GCAGC 2 cut(s) 568, 775
LweI GCATC 2 cut(s) 183, 1149
MaeI CTAG 3 cut(s) 530, 665, 1575
MaeII ACGT 6 cut(s) 73, 367, 960, 1226, 1609, 1682
MaeIII GTNAC 5 cut(s) 460, 574, 619, 1070, 1312
MalI GATC 4 cut(s) 108, 454, 1180, 1616
MbiI CCGCTC 1 cut(s) 1250
MboI GATC 4 cut(s) 106, 452, 1178, 1614
MboII GAAGA 7 cut(s) 191, 199, 303, 998, 1490, 1493, 1649
MfeI CAATTG 1 cut(s) 758
MflI RGATCY 1 cut(s) 1178
MhlI GDGCHC 1 cut(s) 897
MlyI GAGTC 3 cut(s) 777, 891, 1377
MmeI TCCRAC 4 cut(s) 233, 726, 1209, 1247
MnlI CCTC 7 cut(s) 183, 391, 514, 1011, 1117, 1418, 1447
Mph1103I ATGCAT 1 cut(s) 1522
MseI TTAA 8 cut(s) 66, 224, 230, 447, 482, 941, 1295, 1668
MslI CAYNNNNRTG 2 cut(s) 467, 1638
MspCI CTTAAG 1 cut(s) 1667
MspI CCGG 3 cut(s) 694, 1302, 1557
MspR9I CCNGG 3 cut(s) 542, 695, 1076
MunI CAATTG 1 cut(s) 758
Mva1269I GAATGC 1 cut(s) 1454
MvaI CCWGG 2 cut(s) 542, 1076
MwoI GCNNNNNNNGC 4 cut(s) 102, 150, 542, 578
NciI CCSGG 1 cut(s) 695
NdeI CATATG 1 cut(s) 121
NdeII GATC 4 cut(s) 106, 452, 1178, 1614
NlaIV GGNNCC 3 cut(s) 164, 207, 1205
NmuCI GTSAC 2 cut(s) 460, 1312
NsbI TGCGCA 1 cut(s) 1592
NsiI ATGCAT 1 cut(s) 1522
NspI RCATGY 1 cut(s) 1433
OliI CACNNNNGTG 1 cut(s) 467
PagI TCATGA 1 cut(s) 1269
PciI ACATGT 1 cut(s) 1429
PcsI WCGNNNNNNNCGW 1 cut(s) 942
PctI GAATGC 1 cut(s) 1454
PfeI GAWTC 3 cut(s) 280, 1157, 1644
PflMI CCANNNNNTGG 1 cut(s) 99
PkrI GCNGC 4 cut(s) 538, 583, 765, 1249
PleI GAGTC 3 cut(s) 776, 890, 1377
PmaCI CACGTG 1 cut(s) 1610
PmlI CACGTG 1 cut(s) 1610
PpsI GAGTC 3 cut(s) 776, 890, 1377
Ppu21I YACGTR 1 cut(s) 1610
PscI ACATGT 1 cut(s) 1429
PsiI TTATAA 2 cut(s) 200, 1679
Psp1406I AACGTT 1 cut(s) 1226
Psp6I CCWGG 2 cut(s) 540, 1074
PspCI CACGTG 1 cut(s) 1610
PspFI CCCAGC 1 cut(s) 92
PspGI CCWGG 2 cut(s) 540, 1074
PspN4I GGNNCC 3 cut(s) 164, 207, 1205
PspPI GGNCC 1 cut(s) 163
PstI CTGCAG 1 cut(s) 1054
PstNI CAGNNNCTG 2 cut(s) 578, 643
PsuI RGATCY 1 cut(s) 1178
RsaI GTAC 3 cut(s) 55, 1041, 1704
RsaNI GTAC 3 cut(s) 54, 1040, 1703
RseI CAYNNNNRTG 2 cut(s) 467, 1638
SaqAI TTAA 8 cut(s) 66, 224, 230, 447, 482, 941, 1295, 1668
SatI GCNGC 4 cut(s) 537, 582, 764, 1248
Sau3AI GATC 4 cut(s) 106, 452, 1178, 1614
Sau96I GGNCC 1 cut(s) 163
ScaI AGTACT 1 cut(s) 55
SchI GAGTC 3 cut(s) 777, 891, 1377
ScrFI CCNGG 3 cut(s) 542, 695, 1076
SduI GDGCHC 1 cut(s) 897
SfaNI GCATC 2 cut(s) 183, 1149
SfcI CTRYAG 1 cut(s) 1050
SgrAI CRCCGGYG 1 cut(s) 1556
SinI GGWCC 1 cut(s) 163
SmiMI CAYNNNNRTG 2 cut(s) 467, 1638
SmlI CTYRAG 2 cut(s) 563, 1667
SmoI CTYRAG 2 cut(s) 563, 1667
SsiI CCGC 3 cut(s) 537, 1248, 1554
SspI AATATT 1 cut(s) 902
SspMI CTAG 3 cut(s) 530, 665, 1575
StyD4I CCNGG 3 cut(s) 540, 693, 1074
StyI CCWWGG 3 cut(s) 659, 1326, 1574
TaaI ACNGT 1 cut(s) 645
TaiI ACGT 6 cut(s) 76, 370, 963, 1229, 1612, 1685
TaqI TCGA 6 cut(s) 70, 373, 429, 1494, 1617, 1695
TatI WGTACW 1 cut(s) 53
TauI GCSGC 2 cut(s) 539, 1250
TfiI GAWTC 3 cut(s) 280, 1157, 1644
Tru1I TTAA 8 cut(s) 66, 224, 230, 447, 482, 941, 1295, 1668
Tru9I TTAA 8 cut(s) 66, 224, 230, 447, 482, 941, 1295, 1668
TscAI CASTG 2 cut(s) 469, 648
TseFI GTSAC 2 cut(s) 460, 1312
TseI GCWGC 2 cut(s) 581, 763
Tsp45I GTSAC 2 cut(s) 460, 1312
TspGWI ACGGA 1 cut(s) 531
TspRI CASTG 2 cut(s) 469, 648
Van91I CCANNNNNTGG 1 cut(s) 99
Vha464I CTTAAG 1 cut(s) 1667
VpaK11BI GGWCC 1 cut(s) 163
XapI RAATTY 6 cut(s) 226, 240, 300, 443, 477, 1321
XceI RCATGY 1 cut(s) 1433
XmaJI CCTAGG 1 cut(s) 1574
XmiI GTMKAC 1 cut(s) 885
XspI CTAG 3 cut(s) 530, 665, 1575
ZrmI AGTACT 1 cut(s) 55
Zsp2I ATGCAT 1 cut(s) 1522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.