Rh6DG124700

(-)-alpha-pinene synthase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000053
Physical Location & Seq
Reverse (-)
17569809 .. 17572631
2823 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG124700.1

Sequence Viewer

Length: 1227 bp
ATGCTGAGTCTCTACGAAGCAGCACATCTTAGGATTCATGGAGAAGATACACTAGAAGAGGCTCTTGTTTTCACCACTACTCACCTCGAGTCCGCAAAATCCAATGCATGCTATCAAGTACAAATGACTAAACAAATAACTCAAGCCTTGGAGAGACCTCTGCGAAAAAGTCTGGAGAGGATATGTGCCAAGCGTCACATGTCAATTTACCAACATGAAGATGAAGCCTCACTCATCCAACGCAATGAAGCTTTATTGAAACTTGCAAAGTTGGATTTCAATCTTGTTCAGTTTTTACACAAAAAGGAGTTATGTGAGATTGCTAGGTGGTGGAAAGAACTAGACTTTGAAAGGAAATTGCCTTTTGCAAGAGACAGGAAGGTGGAGTTGTTCTTTTGGATAGTGGGAGTATATTTTGAACCCCAGTACTCTATTGGCAGAATCATTATGACAAAAGTGGCTATCCTCCTAACTGTTTTGGATGATATCTATGATGCATATGGTACATTTGAAGAACTCGTGATCTTCACTGAAGCAATTGACAGGTGGGATGTCAAATGCATAGACGGACTGCCGGAATATTTGAAAATATTCTATCATGAACTTTTGAATCTTTTCAATGAAATTGACAAAGTGATGTCAAAGGAAGGAAGATCATACCGAGTTTGCTACGCTATACAAGCTATGAAAGATCAAGCCCGATCGTATTTCAATGAGGCCCAATGGTTGCACGAAGGACGCATTCCGAGCATGGAGGAGTATATGAGTGTTGCTACTGTTTCAATTAGTTACACTTTTCTAACAACCATTTCATTACTTGGCATGGGAGATATTGTAACGAAGGACGCATTTGAGTGGTTGTTGAATGACCCAAAAATTGTTAGAGCTTCCAATGTCATTTTTAGGCTTATGGATGACATTGTTTCCACCAAGTTTGAAAAAGAGAGAGGGCATGCACCATCTAGCATTGATTGCTATATGAAGCAATATGGTGTTTCAGAGGAAGAGACGATTGATGTTTTCAACAAAAAAATTGTGGAATCATGGAAGGATATAAACGAGGAGTTTCTCAAACCAACCACTGTGCCAATGCCGGTTCTTATGCGAGTTCTTAATTTAACAAGAGTAGCAGATCTTCTTTACAAGGGAGAAGATGGATTCACACGGGTTGGGAAGATGACCAAAGATAGTGTTGCTGCAGTTATTATCGATTCAGTGCCACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

408

Amino Acids

47.52

Weight (kDa)

5.47

Isoelectric Point (pI)

37.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 1 - 50 3e-12 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 112 - 351 2.6e-99 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 152 - 351 2.3e-59 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 93
AcuI CTGAAG 1 cut(s) 552
AfaI GTAC 3 cut(s) 120, 428, 505
AflIII ACRYGT 1 cut(s) 198
AluBI AGCT 3 cut(s) 251, 683, 887
AluI AGCT 3 cut(s) 251, 683, 887
Alw26I GTCTC 4 cut(s) 14, 148, 366, 1001
Ama87I CYCGRG 1 cut(s) 86
AoxI GGCC 1 cut(s) 717
ApeKI GCWGC 2 cut(s) 20, 1196
Asp700I GAANNNNTTC 2 cut(s) 590, 614
AspS9I GGNCC 1 cut(s) 718
AsuHPI GGTGA 2 cut(s) 64, 74
AvaI CYCGRG 1 cut(s) 86
BarI GAAGNNNNNNTAC 2 cut(s) 1119, 1151
BauI CACGAG 1 cut(s) 518
BbvI GCAGC 2 cut(s) 32, 1183
BccI CCATC 2 cut(s) 967, 1148
BcoDI GTCTC 4 cut(s) 14, 148, 366, 1001
BfaI CTAG 4 cut(s) 53, 324, 341, 963
BfmI CTRYAG 1 cut(s) 1197
BglII AGATCT 1 cut(s) 1132
BisI GCNGC 2 cut(s) 21, 1197
BlsI GCNGC 2 cut(s) 22, 1198
BmcAI AGTACT 1 cut(s) 428
BmeT110I CYCGRG 1 cut(s) 86
BmgT120I GGNCC 1 cut(s) 718
BmrI ACTGGG 1 cut(s) 418
BmsI GCATC 1 cut(s) 484
BmuI ACTGGG 1 cut(s) 418
BpmI CTGGAG 1 cut(s) 194
BpuEI CTTGAG 1 cut(s) 126
Bsa29I ATCGAT 1 cut(s) 1209
BsaBI GATNNNNATC 1 cut(s) 279
BsaI GGTCTC 1 cut(s) 148
BsaJI CCNNGG 1 cut(s) 147
BsaXI ACNNNNNCTCC 2 cut(s) 819, 849
Bse118I RCCGGY 1 cut(s) 1093
Bse1I ACTGG 1 cut(s) 424
Bse3DI GCAATG 1 cut(s) 250
Bse8I GATNNNNATC 1 cut(s) 279
BseCI ATCGAT 1 cut(s) 1209
BseDI CCNNGG 1 cut(s) 147
BseGI GGATG 4 cut(s) 234, 487, 556, 919
BseJI GATNNNNATC 1 cut(s) 279
BseMI GCAATG 1 cut(s) 250
BseNI ACTGG 1 cut(s) 424
BseRI GAGGAG 2 cut(s) 770, 1076
BseXI GCAGC 2 cut(s) 32, 1183
Bsh1285I CGRYCG 1 cut(s) 704
BshFI GGCC 1 cut(s) 719
BshVI ATCGAT 1 cut(s) 1209
BsiEI CGRYCG 1 cut(s) 704
BsiHKCI CYCGRG 1 cut(s) 86
BsiSI CCGG 2 cut(s) 575, 1094
BsmAI GTCTC 4 cut(s) 14, 148, 366, 1001
BsmBI CGTCTC 1 cut(s) 1001
BsmI GAATGC 1 cut(s) 741
BsnI GGCC 1 cut(s) 719
Bso31I GGTCTC 1 cut(s) 148
BsoBI CYCGRG 1 cut(s) 86
Bsp143I GATC 5 cut(s) 522, 653, 691, 701, 1132
BspACI CCGC 1 cut(s) 93
BspANI GGCC 1 cut(s) 719
BspDI ATCGAT 1 cut(s) 1209
BspHI TCATGA 1 cut(s) 598
BspMAI CTGCAG 1 cut(s) 1201
BspTNI GGTCTC 1 cut(s) 148
BsrDI GCAATG 1 cut(s) 250
BsrFI RCCGGY 1 cut(s) 1093
BsrI ACTGG 1 cut(s) 424
BssAI RCCGGY 1 cut(s) 1093
BssECI CCNNGG 1 cut(s) 147
BssMI GATC 5 cut(s) 522, 653, 691, 701, 1132
BssSI CACGAG 1 cut(s) 518
BssT1I CCWWGG 1 cut(s) 147
Bst2BI CACGAG 1 cut(s) 518
Bst4CI ACNGT 4 cut(s) 475, 778, 1084, 1224
Bst6I CTCTTC 2 cut(s) 51, 999
BstAPI GCANNNNNTGC 1 cut(s) 972
BstC8I GCNNGC 2 cut(s) 109, 954
BstDEI CTNAG 2 cut(s) 5, 29
BstF5I GGATG 4 cut(s) 234, 487, 556, 919
BstKTI GATC 5 cut(s) 525, 656, 694, 704, 1135
BstMAI GTCTC 4 cut(s) 14, 148, 366, 1001
BstMBI GATC 5 cut(s) 522, 653, 691, 701, 1132
BstMCI CGRYCG 1 cut(s) 704
BstMWI GCNNNNNNNGC 3 cut(s) 680, 747, 972
BstNSI RCATGY 3 cut(s) 111, 202, 956
BstSFI CTRYAG 1 cut(s) 1197
BstV1I GCAGC 2 cut(s) 32, 1183
BstX2I RGATCY 1 cut(s) 1132
BstYI RGATCY 1 cut(s) 1132
Bsu15I ATCGAT 1 cut(s) 1209
BsuRI GGCC 1 cut(s) 719
BsuTUI ATCGAT 1 cut(s) 1209
BtsCI GGATG 4 cut(s) 234, 487, 556, 919
BtsIMutI CAGTG 4 cut(s) 528, 1080, 1220, 1221
Cac8I GCNNGC 2 cut(s) 109, 954
CciI TCATGA 1 cut(s) 598
Cfr10I RCCGGY 1 cut(s) 1093
Cfr13I GGNCC 1 cut(s) 718
ClaI ATCGAT 1 cut(s) 1209
CseI GACGC 3 cut(s) 182, 747, 854
Csp6I GTAC 3 cut(s) 119, 427, 504
CspCI CAANNNNNGTGG 2 cut(s) 916, 951
CviAII CATG 9 cut(s) 38, 108, 199, 215, 599, 751, 823, 953, 1044
CviQI GTAC 3 cut(s) 119, 427, 504
DdeI CTNAG 2 cut(s) 5, 29
DpnI GATC 5 cut(s) 524, 655, 693, 703, 1134
DpnII GATC 5 cut(s) 522, 653, 691, 701, 1132
Eam1104I CTCTTC 2 cut(s) 51, 999
EarI CTCTTC 2 cut(s) 51, 999
Eco130I CCWWGG 1 cut(s) 147
Eco31I GGTCTC 1 cut(s) 148
Eco32I GATATC 1 cut(s) 487
Eco57I CTGAAG 1 cut(s) 552
Eco88I CYCGRG 1 cut(s) 86
EcoRV GATATC 1 cut(s) 487
EcoT14I CCWWGG 1 cut(s) 147
EcoT22I ATGCAT 3 cut(s) 109, 499, 563
ErhI CCWWGG 1 cut(s) 147
Esp3I CGTCTC 1 cut(s) 1001
FaeI CATG 9 cut(s) 41, 111, 202, 218, 602, 754, 826, 956, 1047
FalI AAGNNNNNCTT 2 cut(s) 48, 80
FatI CATG 9 cut(s) 37, 107, 198, 214, 598, 750, 822, 952, 1043
FauNDI CATATG 1 cut(s) 499
Fnu4HI GCNGC 2 cut(s) 21, 1197
FokI GGATG 4 cut(s) 221, 494, 563, 926
Fsp4HI GCNGC 2 cut(s) 21, 1197
FspBI CTAG 4 cut(s) 53, 324, 341, 963
GluI GCNGC 2 cut(s) 21, 1197
GsuI CTGGAG 1 cut(s) 194
HaeIII GGCC 1 cut(s) 719
HapII CCGG 2 cut(s) 575, 1094
HgaI GACGC 3 cut(s) 182, 747, 854
Hin1II CATG 9 cut(s) 41, 111, 202, 218, 602, 754, 826, 956, 1047
HindIII AAGCTT 1 cut(s) 249
HinfI GANTC 8 cut(s) 7, 34, 89, 441, 610, 1040, 1158, 1211
HpaII CCGG 2 cut(s) 575, 1094
HphI GGTGA 2 cut(s) 64, 74
Hpy188I TCNGA 2 cut(s) 747, 1000
Hpy188III TCNNGA 3 cut(s) 173, 520, 599
HpyAV CCTTC 5 cut(s) 373, 641, 728, 835, 1042
HpyCH4III ACNGT 4 cut(s) 475, 778, 1084, 1224
HpyCH4V TGCA 8 cut(s) 107, 266, 368, 497, 561, 730, 956, 1199
HpyF10VI GCNNNNNNNGC 3 cut(s) 680, 747, 972
HpyF3I CTNAG 2 cut(s) 5, 29
Hsp92II CATG 9 cut(s) 41, 111, 202, 218, 602, 754, 826, 956, 1047
Kzo9I GATC 5 cut(s) 522, 653, 691, 701, 1132
LpnPI CCDG 6 cut(s) 158, 361, 437, 529, 588, 1107
Lsp1109I GCAGC 2 cut(s) 32, 1183
LweI GCATC 1 cut(s) 484
MaeI CTAG 4 cut(s) 53, 324, 341, 963
MaeIII GTNAC 3 cut(s) 194, 788, 835
MalI GATC 5 cut(s) 524, 655, 693, 703, 1134
MboI GATC 5 cut(s) 522, 653, 691, 701, 1132
MfeI CAATTG 1 cut(s) 537
MflI RGATCY 1 cut(s) 1132
MluCI AATT 8 cut(s) 204, 356, 537, 624, 783, 876, 1032, 1114
MlyI GAGTC 2 cut(s) 16, 98
MmeI TCCRAC 2 cut(s) 252, 262
Mph1103I ATGCAT 3 cut(s) 109, 499, 563
MroXI GAANNNNTTC 2 cut(s) 590, 614
MseI TTAA 2 cut(s) 1113, 1118
MslI CAYNNNNRTG 2 cut(s) 219, 853
MspI CCGG 2 cut(s) 575, 1094
MunI CAATTG 1 cut(s) 537
Mva1269I GAATGC 1 cut(s) 741
MwoI GCNNNNNNNGC 3 cut(s) 680, 747, 972
NdeI CATATG 1 cut(s) 499
NdeII GATC 5 cut(s) 522, 653, 691, 701, 1132
NlaIII CATG 9 cut(s) 41, 111, 202, 218, 602, 754, 826, 956, 1047
NmuCI GTSAC 1 cut(s) 194
NsiI ATGCAT 3 cut(s) 109, 499, 563
NspI RCATGY 3 cut(s) 111, 202, 956
PaeI GCATGC 2 cut(s) 111, 956
PaeR7I CTCGAG 1 cut(s) 86
PagI TCATGA 1 cut(s) 598
PciI ACATGT 1 cut(s) 198
PctI GAATGC 1 cut(s) 741
PdmI GAANNNNTTC 2 cut(s) 590, 614
PfeI GAWTC 6 cut(s) 34, 441, 610, 1040, 1158, 1211
PkrI GCNGC 2 cut(s) 22, 1198
Ple19I CGATCG 1 cut(s) 704
PleI GAGTC 2 cut(s) 15, 97
PpsI GAGTC 2 cut(s) 15, 97
PscI ACATGT 1 cut(s) 198
PspPI GGNCC 1 cut(s) 718
PspXI VCTCGAGB 1 cut(s) 86
PstI CTGCAG 1 cut(s) 1201
PsuI RGATCY 1 cut(s) 1132
PvuI CGATCG 1 cut(s) 704
RsaI GTAC 3 cut(s) 120, 428, 505
RsaNI GTAC 3 cut(s) 119, 427, 504
RseI CAYNNNNRTG 2 cut(s) 219, 853
SaqAI TTAA 2 cut(s) 1113, 1118
SatI GCNGC 2 cut(s) 21, 1197
Sau3AI GATC 5 cut(s) 522, 653, 691, 701, 1132
Sau96I GGNCC 1 cut(s) 718
ScaI AGTACT 1 cut(s) 428
SchI GAGTC 2 cut(s) 16, 98
SetI ASST 8 cut(s) 87, 160, 253, 329, 384, 548, 685, 889
SfaNI GCATC 1 cut(s) 484
SfcI CTRYAG 1 cut(s) 1197
Sfr274I CTCGAG 1 cut(s) 86
SlaI CTCGAG 1 cut(s) 86
SmiMI CAYNNNNRTG 2 cut(s) 219, 853
SmlI CTYRAG 2 cut(s) 86, 141
SmoI CTYRAG 2 cut(s) 86, 141
SphI GCATGC 2 cut(s) 111, 956
Sse9I AATT 8 cut(s) 204, 356, 537, 624, 783, 876, 1032, 1114
SsiI CCGC 1 cut(s) 93
SspI AATATT 2 cut(s) 581, 591
SspMI CTAG 4 cut(s) 53, 324, 341, 963
StyI CCWWGG 1 cut(s) 147
TaaI ACNGT 4 cut(s) 475, 778, 1084, 1224
TaqI TCGA 2 cut(s) 87, 1209
TasI AATT 8 cut(s) 204, 356, 537, 624, 783, 876, 1032, 1114
TatI WGTACW 2 cut(s) 118, 426
TfiI GAWTC 6 cut(s) 34, 441, 610, 1040, 1158, 1211
Tru1I TTAA 2 cut(s) 1113, 1118
Tru9I TTAA 2 cut(s) 1113, 1118
TscAI CASTG 4 cut(s) 535, 1087, 1221, 1227
TseFI GTSAC 1 cut(s) 194
TseI GCWGC 2 cut(s) 20, 1196
Tsp45I GTSAC 1 cut(s) 194
TspDTI ATGAA 9 cut(s) 26, 231, 237, 261, 615, 636, 701, 801, 995
TspGWI ACGGA 1 cut(s) 582
TspRI CASTG 4 cut(s) 535, 1087, 1221, 1227
XceI RCATGY 3 cut(s) 111, 202, 956
XcmI CCANNNNNNNNNTGG 1 cut(s) 431
XhoI CTCGAG 1 cut(s) 86
XmnI GAANNNNTTC 2 cut(s) 590, 614
XspI CTAG 4 cut(s) 53, 324, 341, 963
ZrmI AGTACT 1 cut(s) 428
Zsp2I ATGCAT 3 cut(s) 109, 499, 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.