Rmu_sc0024896.1_g000001

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024896.1
OG0000053
Physical Location & Seq
Forward (+)
38 .. 1815
1778 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0024896.1_g000001.1.cds

Sequence Viewer

Length: 1275 bp
atgtttaacaagttcaaggaagatgatggaagatttaaggaatcgcttattgatgatgtacttggcctgttaagtttgtacgaagcctcacatcttcagatgcccggggaggatatactgaacgaggcactaaccttcaccaccgctcatctcgagtctgcagcacaccgcttaagctcatcgtcacagctttggaaacaagtaactcatgccttgtatcagccactttggaagggcatgcccagggttgaagcgaggcatcacttgtctatttaccaagaagatgattcacataatgaaactctcctgaatttcgcaaagatggatttcaacactgtgcagaaagttcatcagaaagaactaagtgaaattacgaggtggtggaaggacttggactttgtaaccaagctcccttttgcaagagacaaggtagttgaggcctatttttgggctctgggagtatactttcagcctgaatattactttgccaggatggtattagccaaagctattgctatcattacagtcattgacgacatatatgatgtacgtggcacgtatgaagaattagagagctttactgaagctattgagaggtgggacatttctgctgttgatcaactgccagattatatgaaagtgtgttataaagcgctgttgaatttcttcactgagcttgaagaaaatctaacgaataagggaatcttataccgcctccactatgcgagagaaggattcaaagttcaagtcagagcttacttccaggaagcaaaatggttcaaacaaaagtacacaccatcaatggaagagtacatgtctgtggaacgttatacatccttcttcatggtagcaacagtgtcatttgttggaatgggagttattgttacaaaagactccatggattgggttttcagtgaaccaaagatttcaaaggccgcatctataattggcaggctcatgaatgaccttgtaggccataagtttgagcaaacgagagaacacattgcatcagccgtggaatgctacatgaagcaatatggtgtcacagaagaagaagcagaggtcgagctaactaaacaagtgaatgacgcatggaaagacataaacgaagagtggctcgatgccacctctatccctaggcccctactcttgctgattttgaactttgcacgttctagtgaaattctatacaagggggaggatgtgtacactcattctggaaatgtgctcaagggtcatgtagtttctctctttatcgatcccgtgcccatataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

424

Amino Acids

49.39

Weight (kDa)

5.18

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 648
AccB7I CCANNNNNTGG 1 cut(s) 903
AccBSI CCGCTC 1 cut(s) 146
AccI GTMKAC 1 cut(s) 462
AciI CCGC 4 cut(s) 144, 169, 712, 936
AclI AACGTT 1 cut(s) 826
AclWI GGATC 1 cut(s) 1253
AcsI RAATTY 3 cut(s) 310, 661, 1182
AcuI CTGAAG 2 cut(s) 80, 603
AfaI GTAC 6 cut(s) 60, 80, 549, 791, 812, 1208
AfeI AGCGCT 1 cut(s) 654
AfiI CCNNNNNNNGG 2 cut(s) 447, 903
AflII CTTAAG 1 cut(s) 172
AflIII ACRYGT 1 cut(s) 813
AjnI CCWGG 3 cut(s) 242, 488, 762
AloI GAACNNNNNNTCC 2 cut(s) 726, 758
AluBI AGCT 9 cut(s) 177, 190, 409, 509, 576, 587, 676, 755, 1069
AluI AGCT 9 cut(s) 177, 190, 409, 509, 576, 587, 676, 755, 1069
Alw21I GWGCWC 1 cut(s) 1230
Alw26I GTCTC 1 cut(s) 417
AlwI GGATC 1 cut(s) 1253
Ama87I CYCGRG 2 cut(s) 104, 152
Aor51HI AGCGCT 1 cut(s) 654
AoxI GGCC 5 cut(s) 64, 438, 933, 973, 1139
ApeKI GCWGC 1 cut(s) 161
ApoI RAATTY 3 cut(s) 310, 661, 1182
ArsI GACNNNNNNTTYG 4 cut(s) 380, 412, 732, 764
Asp700I GAANNNNTTC 1 cut(s) 665
AspA2I CCTAGG 1 cut(s) 1136
AspLEI GCGC 1 cut(s) 655
AspS9I GGNCC 1 cut(s) 1140
AsuC2I CCSGG 2 cut(s) 105, 106
AsuHPI GGTGA 1 cut(s) 130
AvaI CYCGRG 2 cut(s) 104, 152
AvrII CCTAGG 1 cut(s) 1136
BaeGI GKGCMC 1 cut(s) 1269
BanII GRGCYC 1 cut(s) 454
Bbv12I GWGCWC 1 cut(s) 1230
BbvI GCAGC 1 cut(s) 173
BccI CCATC 4 cut(s) 20, 316, 487, 805
BceAI ACGGC 1 cut(s) 998
BciT130I CCWGG 3 cut(s) 244, 490, 764
BclI TGATCA 1 cut(s) 616
BcnI CCSGG 2 cut(s) 105, 106
BcoDI GTCTC 1 cut(s) 417
BfaI CTAG 2 cut(s) 1137, 1176
BfmI CTRYAG 1 cut(s) 159
BfoI RGCGCY 1 cut(s) 656
BfrI CTTAAG 1 cut(s) 172
BisI GCNGC 2 cut(s) 162, 936
BlnI CCTAGG 1 cut(s) 1136
BlsI GCNGC 2 cut(s) 163, 937
Bme1390I CCNGG 5 cut(s) 105, 106, 244, 490, 764
BmeT110I CYCGRG 2 cut(s) 104, 152
BmgT120I GGNCC 1 cut(s) 1140
BmiI GGNNCC 1 cut(s) 1142
BmrFI CCNGG 5 cut(s) 105, 106, 244, 490, 764
BmsI GCATC 5 cut(s) 90, 268, 947, 1016, 1111
BpuEI CTTGAG 1 cut(s) 1214
BpuMI CCSGG 2 cut(s) 105, 106
Bsa29I ATCGAT 1 cut(s) 1257
BsaAI YACGTR 2 cut(s) 551, 558
BsaJI CCNNGG 7 cut(s) 104, 105, 242, 243, 897, 1014, 1136
BsaXI ACNNNNNCTCC 4 cut(s) 867, 897, 1190, 1220
Bsc4I CCNNNNNNNGG 2 cut(s) 447, 903
Bse3DI GCAATG 1 cut(s) 1002
BseBI CCWGG 3 cut(s) 244, 490, 764
BseCI ATCGAT 1 cut(s) 1257
BseDI CCNNGG 7 cut(s) 104, 105, 242, 243, 897, 1014, 1136
BseGI GGATG 3 cut(s) 498, 833, 1207
BseLI CCNNNNNNNGG 2 cut(s) 447, 903
BseMI GCAATG 1 cut(s) 1002
BseMII CTCAG 1 cut(s) 663
BseSI GKGCMC 1 cut(s) 1269
BseXI GCAGC 1 cut(s) 173
BsgI GTGCAG 1 cut(s) 359
BshFI GGCC 5 cut(s) 66, 440, 935, 975, 1141
BshVI ATCGAT 1 cut(s) 1257
BsiHKAI GWGCWC 1 cut(s) 1230
BsiHKCI CYCGRG 2 cut(s) 104, 152
BsiSI CCGG 1 cut(s) 105
BslFI GGGAC 1 cut(s) 614
BslI CCNNNNNNNGG 2 cut(s) 447, 903
BsmAI GTCTC 1 cut(s) 417
BsmFI GGGAC 1 cut(s) 614
BsmI GAATGC 1 cut(s) 1025
BsnI GGCC 5 cut(s) 66, 440, 935, 975, 1141
BsoBI CYCGRG 2 cut(s) 104, 152
Bsp1286I GDGCHC 3 cut(s) 454, 1230, 1269
Bsp1407I TGTACA 1 cut(s) 1206
Bsp143I GATC 2 cut(s) 616, 1258
Bsp19I CCATGG 1 cut(s) 897
BspACI CCGC 4 cut(s) 144, 169, 712, 936
BspANI GGCC 5 cut(s) 66, 440, 935, 975, 1141
BspCNI CTCAG 1 cut(s) 664
BspDI ATCGAT 1 cut(s) 1257
BspHI TCATGA 1 cut(s) 957
BspLI GGNNCC 1 cut(s) 1142
BspMAI CTGCAG 1 cut(s) 163
BspPI GGATC 1 cut(s) 1253
BspTI CTTAAG 1 cut(s) 172
BsrBI CCGCTC 1 cut(s) 146
BsrDI GCAATG 1 cut(s) 1002
BsrGI TGTACA 1 cut(s) 1206
BssECI CCNNGG 7 cut(s) 104, 105, 242, 243, 897, 1014, 1136
BssMI GATC 2 cut(s) 616, 1258
BssNAI GTATAC 1 cut(s) 463
BssT1I CCWWGG 2 cut(s) 897, 1136
Bst1107I GTATAC 1 cut(s) 463
Bst2UI CCWGG 3 cut(s) 244, 490, 764
Bst4CI ACNGT 3 cut(s) 337, 526, 856
Bst6I CTCTTC 2 cut(s) 801, 1104
BstAFI CTTAAG 1 cut(s) 172
BstAUI TGTACA 1 cut(s) 1206
BstBAI YACGTR 2 cut(s) 551, 558
BstC8I GCNNGC 2 cut(s) 239, 953
BstDEI CTNAG 2 cut(s) 362, 672
BstDSI CCRYGG 2 cut(s) 897, 1014
BstF5I GGATG 3 cut(s) 498, 833, 1207
BstH2I RGCGCY 1 cut(s) 656
BstHHI GCGC 1 cut(s) 655
BstKTI GATC 2 cut(s) 619, 1261
BstMAI GTCTC 1 cut(s) 417
BstMBI GATC 2 cut(s) 616, 1258
BstNI CCWGG 3 cut(s) 244, 490, 764
BstNSI RCATGY 2 cut(s) 241, 817
BstSCI CCNGG 5 cut(s) 103, 104, 242, 488, 762
BstSFI CTRYAG 1 cut(s) 159
BstSLI GKGCMC 1 cut(s) 1269
BstV1I GCAGC 1 cut(s) 173
BstZ17I GTATAC 1 cut(s) 463
Bsu15I ATCGAT 1 cut(s) 1257
BsuRI GGCC 5 cut(s) 66, 440, 935, 975, 1141
BsuTUI ATCGAT 1 cut(s) 1257
BtgI CCRYGG 2 cut(s) 897, 1014
BtsCI GGATG 3 cut(s) 498, 833, 1207
BtsIMutI CAGTG 4 cut(s) 333, 669, 861, 919
Cac8I GCNNGC 2 cut(s) 239, 953
CciI TCATGA 1 cut(s) 957
CfoI GCGC 1 cut(s) 655
Cfr13I GGNCC 1 cut(s) 1140
Cfr9I CCCGGG 1 cut(s) 104
ClaI ATCGAT 1 cut(s) 1257
CseI GACGC 1 cut(s) 1097
Csp6I GTAC 6 cut(s) 59, 79, 548, 790, 811, 1207
CviAII CATG 9 cut(s) 209, 238, 814, 844, 898, 958, 1027, 1092, 1238
CviQI GTAC 6 cut(s) 59, 79, 548, 790, 811, 1207
DdeI CTNAG 2 cut(s) 362, 672
DpnI GATC 2 cut(s) 618, 1260
DpnII GATC 2 cut(s) 616, 1258
Eam1104I CTCTTC 2 cut(s) 801, 1104
EarI CTCTTC 2 cut(s) 801, 1104
Eco130I CCWWGG 2 cut(s) 897, 1136
Eco147I AGGCCT 1 cut(s) 440
Eco24I GRGCYC 1 cut(s) 454
Eco47III AGCGCT 1 cut(s) 654
Eco57I CTGAAG 2 cut(s) 80, 603
Eco88I CYCGRG 2 cut(s) 104, 152
EcoO109I RGGNCCY 1 cut(s) 1140
EcoRII CCWGG 3 cut(s) 242, 488, 762
EcoT14I CCWWGG 2 cut(s) 897, 1136
EcoT38I GRGCYC 1 cut(s) 454
ErhI CCWWGG 2 cut(s) 897, 1136
FaeI CATG 9 cut(s) 212, 241, 817, 847, 901, 961, 1030, 1095, 1241
FalI AAGNNNNNCTT 2 cut(s) 689, 721
FaqI GGGAC 1 cut(s) 614
FatI CATG 9 cut(s) 208, 237, 813, 843, 897, 957, 1026, 1091, 1237
FbaI TGATCA 1 cut(s) 616
FblI GTMKAC 1 cut(s) 462
Fnu4HI GCNGC 2 cut(s) 162, 936
FokI GGATG 3 cut(s) 505, 820, 1214
FriOI GRGCYC 1 cut(s) 454
Fsp4HI GCNGC 2 cut(s) 162, 936
FspBI CTAG 2 cut(s) 1137, 1176
GlaI GCGC 1 cut(s) 654
GluI GCNGC 2 cut(s) 162, 936
HaeII RGCGCY 1 cut(s) 656
HaeIII GGCC 5 cut(s) 66, 440, 935, 975, 1141
HapII CCGG 1 cut(s) 105
HgaI GACGC 1 cut(s) 1097
HhaI GCGC 1 cut(s) 655
Hin1II CATG 9 cut(s) 212, 241, 817, 847, 901, 961, 1030, 1095, 1241
Hin6I GCGC 1 cut(s) 653
HinP1I GCGC 1 cut(s) 653
HinfI GANTC 6 cut(s) 41, 155, 287, 702, 735, 893
HpaII CCGG 1 cut(s) 105
HphI GGTGA 1 cut(s) 130
Hpy166II GTNNAC 5 cut(s) 463, 792, 917, 1207, 1209
Hpy188I TCNGA 3 cut(s) 99, 354, 752
Hpy188III TCNNGA 4 cut(s) 152, 307, 958, 1218
Hpy8I GTNNAC 5 cut(s) 463, 792, 917, 1207, 1209
HpyAV CCTTC 5 cut(s) 145, 226, 379, 725, 847
HpyCH4III ACNGT 3 cut(s) 337, 526, 856
HpyCH4IV ACGT 4 cut(s) 550, 557, 826, 1171
HpyCH4V TGCA 5 cut(s) 161, 340, 419, 1007, 1169
HpyF3I CTNAG 2 cut(s) 362, 672
HpySE526I ACGT 4 cut(s) 550, 557, 826, 1171
Hsp92II CATG 9 cut(s) 212, 241, 817, 847, 901, 961, 1030, 1095, 1241
HspAI GCGC 1 cut(s) 653
Ksp22I TGATCA 1 cut(s) 616
Kzo9I GATC 2 cut(s) 616, 1258
LmnI GCTCC 1 cut(s) 414
Lsp1109I GCAGC 1 cut(s) 173
LweI GCATC 5 cut(s) 90, 268, 947, 1016, 1111
MaeI CTAG 2 cut(s) 1137, 1176
MaeII ACGT 4 cut(s) 550, 557, 826, 1171
MaeIII GTNAC 5 cut(s) 183, 202, 400, 883, 1042
MalI GATC 2 cut(s) 618, 1260
MbiI CCGCTC 1 cut(s) 146
MboI GATC 2 cut(s) 616, 1258
MhlI GDGCHC 3 cut(s) 454, 1230, 1269
MluCI AATT 6 cut(s) 310, 369, 566, 661, 945, 1182
MlyI GAGTC 2 cut(s) 164, 887
MmeI TCCRAC 1 cut(s) 847
MroXI GAANNNNTTC 1 cut(s) 665
MseI TTAA 4 cut(s) 6, 36, 71, 173
MslI CAYNNNNRTG 1 cut(s) 818
MspCI CTTAAG 1 cut(s) 172
MspI CCGG 1 cut(s) 105
MspR9I CCNGG 5 cut(s) 105, 106, 244, 490, 764
Mva1269I GAATGC 1 cut(s) 1025
MvaI CCWGG 3 cut(s) 244, 490, 764
NciI CCSGG 2 cut(s) 105, 106
NcoI CCATGG 1 cut(s) 897
NdeII GATC 2 cut(s) 616, 1258
NlaIII CATG 9 cut(s) 212, 241, 817, 847, 901, 961, 1030, 1095, 1241
NlaIV GGNNCC 1 cut(s) 1142
NmuCI GTSAC 2 cut(s) 183, 1042
NspI RCATGY 2 cut(s) 241, 817
PaeI GCATGC 1 cut(s) 241
PaeR7I CTCGAG 1 cut(s) 152
PagI TCATGA 1 cut(s) 957
PasI CCCWGGG 1 cut(s) 243
PceI AGGCCT 1 cut(s) 440
PciI ACATGT 1 cut(s) 813
PctI GAATGC 1 cut(s) 1025
PdmI GAANNNNTTC 1 cut(s) 665
PfeI GAWTC 4 cut(s) 41, 287, 702, 735
PflMI CCANNNNNTGG 1 cut(s) 903
PfoI TCCNGGA 1 cut(s) 762
PkrI GCNGC 2 cut(s) 163, 937
PleI GAGTC 2 cut(s) 163, 887
PpsI GAGTC 2 cut(s) 163, 887
Ppu21I YACGTR 2 cut(s) 551, 558
PscI ACATGT 1 cut(s) 813
PsiI TTATAA 1 cut(s) 648
Psp1406I AACGTT 1 cut(s) 826
Psp6I CCWGG 3 cut(s) 242, 488, 762
PspGI CCWGG 3 cut(s) 242, 488, 762
PspN4I GGNNCC 1 cut(s) 1142
PspPI GGNCC 1 cut(s) 1140
PstI CTGCAG 1 cut(s) 163
RsaI GTAC 6 cut(s) 60, 80, 549, 791, 812, 1208
RsaNI GTAC 6 cut(s) 59, 79, 548, 790, 811, 1207
RseI CAYNNNNRTG 1 cut(s) 818
SaqAI TTAA 4 cut(s) 6, 36, 71, 173
SatI GCNGC 2 cut(s) 162, 936
Sau3AI GATC 2 cut(s) 616, 1258
Sau96I GGNCC 1 cut(s) 1140
SchI GAGTC 2 cut(s) 164, 887
ScrFI CCNGG 5 cut(s) 105, 106, 244, 490, 764
SduI GDGCHC 3 cut(s) 454, 1230, 1269
SfaNI GCATC 5 cut(s) 90, 268, 947, 1016, 1111
SfcI CTRYAG 1 cut(s) 159
Sfr274I CTCGAG 1 cut(s) 152
SlaI CTCGAG 1 cut(s) 152
SmaI CCCGGG 1 cut(s) 106
SmiMI CAYNNNNRTG 1 cut(s) 818
SmlI CTYRAG 3 cut(s) 152, 172, 1229
SmoI CTYRAG 3 cut(s) 152, 172, 1229
SphI GCATGC 1 cut(s) 241
Sse9I AATT 6 cut(s) 310, 369, 566, 661, 945, 1182
SseBI AGGCCT 1 cut(s) 440
SsiI CCGC 4 cut(s) 144, 169, 712, 936
SspI AATATT 1 cut(s) 479
SspMI CTAG 2 cut(s) 1137, 1176
StuI AGGCCT 1 cut(s) 440
StyD4I CCNGG 5 cut(s) 103, 104, 242, 488, 762
StyI CCWWGG 2 cut(s) 897, 1136
TaaI ACNGT 3 cut(s) 337, 526, 856
TaiI ACGT 4 cut(s) 553, 560, 829, 1174
TaqI TCGA 4 cut(s) 153, 1065, 1119, 1257
TasI AATT 6 cut(s) 310, 369, 566, 661, 945, 1182
TatI WGTACW 4 cut(s) 58, 789, 810, 1206
TauI GCSGC 1 cut(s) 938
TfiI GAWTC 4 cut(s) 41, 287, 702, 735
Tru1I TTAA 4 cut(s) 6, 36, 71, 173
Tru9I TTAA 4 cut(s) 6, 36, 71, 173
TscAI CASTG 4 cut(s) 340, 676, 861, 919
TseFI GTSAC 2 cut(s) 183, 1042
TseI GCWGC 1 cut(s) 161
Tsp45I GTSAC 2 cut(s) 183, 1042
TspDTI ATGAA 7 cut(s) 312, 338, 576, 650, 832, 974, 1043
TspMI CCCGGG 1 cut(s) 104
TspRI CASTG 4 cut(s) 340, 676, 861, 919
Van91I CCANNNNNTGG 1 cut(s) 903
Vha464I CTTAAG 1 cut(s) 172
XapI RAATTY 3 cut(s) 310, 661, 1182
XceI RCATGY 2 cut(s) 241, 817
XhoI CTCGAG 1 cut(s) 152
XmaI CCCGGG 1 cut(s) 104
XmaJI CCTAGG 1 cut(s) 1136
XmiI GTMKAC 1 cut(s) 462
XmnI GAANNNNTTC 1 cut(s) 665
XspI CTAG 2 cut(s) 1137, 1176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.