Rw5G023620

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000053
Physical Location & Seq
Reverse (-)
33357441 .. 33366827
9387 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G023620.1

Sequence Viewer

Length: 1677 bp
ATGTCTGCTCATCCAGTTGAAGCTCAAACCCCAACTGTGACTCCAGATGTTAACCGACGCTCGGCTAACTTTTCTCCCAGCATTTGGGGCGACCATTTTCTGTCATATTCTTCCCTGGAAATGGACTCTAAACTTGAGCAACAGGTCCAGGAACTGAAAGAAGAAGTGAGGAGGACGCTAAAGGCTCCAGTGAAAAACCCCTCACAAAAATTGGACTTCATTGATAACATTCAGCGTCTAGGCGTGTCCTACCACTTTGAGGATGAGATTCATAAAGTTTTGGAGCAAATTCATAGGTTTTATTATGAACGTGATGAGCTACAAAATGATGACGACAATCTTTACACTACTGCTCTCCGTTTTCGATTGCTTCGACAGCAGGGTTATAATATTTCATGTGGTGTGTTCAACAAGTTTAAGAATGGTGATGGAAAATTTAAGGAAGCACTTCTCAATGATGTACCTGGACTACTGAGCTTGTATGAAGCAACACATCTGAGAACTCATGGAGAAGACATTCTTGACGAGGCACTAACCTTCACCACCACTAATCTTGAATCTACAACACATCGTGGTTTAAGCCCCTCACTTTCGAAACAAGTAACACATGCTCTACATCAGCCACTCTGGAAGGGCTTACCAAGGCTAGAAGCAAGGCACTACATGTCTATATATCAGGAACGCGAGTCACATGACGAAACTCTCCTAACCTTTGCAAAGTTGGACTTCAATCTACTGCAACAAGTCCATCAAAAAGAATTAAGTGAAATTACAAGGTGGTGGAAGGAGTTGGATACTGCAAATAAGCTATCTTTTGCAAGAGATAGAGTGGTGGAGTGCTACTTCTGGATCCTGGGAGTCCACTTTGAGCCTCAATATTATCCTTCAAGGATGATACTAAGCAAAGTTATTGCCTTGACGTCCGTAATTGATGACATTTACGATGTCTACGGCACATTTGAAGAACTGGTGCTCTTTACTGAAGCTATTGAGAGGTGGGATATCTCTGCCATAGATCAACTGCCAGAGTATATGAAAGTTTGTTATCAAGAACTGTTAGGCATCTACAGTGAAATTGAAGAAAGTCTTGCAAATGAGGGAAAATTATATCGCATCCATTATGCGAGAGAAGCATTCAAAGTTGTAGTTAGAGCTTACTTCCAAGAAGCCAAATGGTTCCACCAGAAATACACACCGACTCTGGAGGAGTACAAGTCTGTAGCACTTGTGACAACTTGCCAGACAATGTTTGCAACCATGTCCTTTATAGCTATGGGTGATATCGTTACAAAAGACACCTTCAATTGGTTGTTTAGTGACCCTAAGATTTTGAAAGGTTCCAAAGTAGTTTCCAGATTCATGGATGACATGGTCACCCACAAGTTTGAGCAAGAGAGGGGACATGTTTCCTCAGCAGTGGAATGCTACATGATAGAACATGGTGCATCAGAAGAAGAAGCAATAACTGAACTAACTAAACAACTGGATAGTGCATGGAGTGACATGAACGAAGGGTGGATTGACCCTACTGCAATCCCTCTGCCCCTCCTAGTGCGGATTATTAATCTTGCTCGCGTGATTGAAGTGATATACAAGTGTGAAGATGGGTATGCTAATAGTGGAGGTGAGCTCAAGGGTTTTGTAGCTTCTCTATTAGTTGAACATGTGCCTGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

558

Amino Acids

64.69

Weight (kDa)

5.24

Isoelectric Point (pI)

50.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 28 - 205 6.7e-62 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 262 - 501 1e-98 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 302 - 501 6.1e-57 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23960 AT5G23960
fragaria_vesca FvH4_1g04000 FvH4_1g04000 FvH4_1g05400 FvH4_3g01590 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21390 FvH4_3g21391 FvH4_3g21490 FvH4_3g21560 FvH4_3g22162 FvH4_3g32100 FvH4_4g27781 FvH4_4g27790 FvH4_4g27860 FvH4_4g27870 FvH4_4g27940 FvH4_4g27943 FvH4_4g27950 FvH4_4g27951 FvH4_4g27952 FvH4_5g06461 FvH4_5g06470 FvH4_5g06530 FvH4_5g35700 FvH4_5g35711 FvH4_5g35712 FvH4_6g06540 FvH4_6g11440 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_6g19050 FvH4_7g03620 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g13030 FvH4_7g33640 FvH4_7g33640 FvH4_7g33750 FvH4_7g33750
malus_domestica MD00G1215200.v1.1 MD03G1206700.v1.1 MD03G1207000.v1.1 MD03G1214900.v1.1 MD03G1218300.v1.1 MD03G1218400.v1.1 MD07G1269200.v1.1 MD11G1232100.v1.1 MD11G1232700.v1.1 MD11G1236200.v1.1 MD11G1236500.v1.1 MD11G1236600.v1.1 MD12G1162900.v1.1 MD12G1163000.v1.1 MD12G1163400.v1.1 MD12G1163700.v1.1 MD12G1163800.v1.1 MD16G1070800.v1.1
prunus_persica Prupe.4G190700_v2.0.a1 Prupe.4G190800_v2.0.a1 Prupe.4G191000_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194100_v2.0.a1 Prupe.4G194200_v2.0.a1 Prupe.4G194300_v2.0.a1 Prupe.4G194400_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194500_v2.0.a1 Prupe.4G194600_v2.0.a1 Prupe.4G197900_v2.0.a1 Prupe.4G198000_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198200_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198500_v2.0.a1 Prupe.4G198600_v2.0.a1 Prupe.4G198700_v2.0.a1 Prupe.4G199000_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199200_v2.0.a1 Prupe.4G199300_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G199500_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200000_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G200100_v2.0.a1 Prupe.4G238900_v2.0.a1
pyrus_communis pycom03g16780 pycom11g20550 pycom11g20570 pycom11g20780 pycom12g15470 pycom12g15530 pycom12g15590 pycom12g15600
rosa_chinensis RchiOBHm_Chr1g0313881 RchiOBHm_Chr1g0326011 RchiOBHm_Chr1g0326051 RchiOBHm_Chr1g0326061 RchiOBHm_Chr1g0326071 RchiOBHm_Chr1g0326251 RchiOBHm_Chr1g0326311 RchiOBHm_Chr1g0326331 RchiOBHm_Chr1g0326351 RchiOBHm_Chr1g0326391 RchiOBHm_Chr3g0474051 RchiOBHm_Chr3g0474411 RchiOBHm_Chr3g0474441 RchiOBHm_Chr3g0474501 RchiOBHm_Chr3g0474541 RchiOBHm_Chr3g0475221 RchiOBHm_Chr3g0490681 RchiOBHm_Chr4g0418071 RchiOBHm_Chr5g0036921 RchiOBHm_Chr5g0037011 RchiOBHm_Chr5g0037601 RchiOBHm_Chr5g0038021 RchiOBHm_Chr5g0038101 RchiOBHm_Chr5g0044191 RchiOBHm_Chr5g0059501 RchiOBHm_Chr5g0059511 RchiOBHm_Chr5g0059541 RchiOBHm_Chr5g0060241 RchiOBHm_Chr5g0060261 RchiOBHm_Chr5g0060571 RchiOBHm_Chr5g0065101 RchiOBHm_Chr6g0245681 RchiOBHm_Chr6g0245691 RchiOBHm_Chr6g0245751 RchiOBHm_Chr6g0246001 RchiOBHm_Chr6g0246011 RchiOBHm_Chr6g0265741 RchiOBHm_Chr6g0270581 RchiOBHm_Chr6g0274871 RchiOBHm_Chr6g0305391 RchiOBHm_Chr7g0210371 RchiOBHm_Chr7g0212441 RchiOBHm_Chr7g0227831 RchiOBHm_Chr7g0228501
rosa_laevigata RLG00000001556 RLG00000001557 RLG00000001562 RLG00000002890 RLG00000006572 RLG00000008725 RLG00000014163 RLG00000015277 RLG00000017042 RLG00000018206 RLG00000023912 RLG00000023916 RLG00000023920 RLG00000023955 RLG00000028351 RLG00000028821 RLG00000028822 RLG00000028823 RLG00000028824 RLG00000029856 RLG00000030075 RLG00000030076 RLG00000030080 RLG00000033743 RLG00000034250 RLG00000035299 RLG00000035350 RLG00000035387 RLG00000035755
rosa_multiflora Rmu_co8151952.1_g000001 Rmu_co8453003.1_g000001 Rmu_sc0000028.1_g000016 Rmu_sc0000208.1_g000003 Rmu_sc0000535.1_g000005 Rmu_sc0000535.1_g000015 Rmu_sc0000613.1_g000028 Rmu_sc0001217.1_g000009 Rmu_sc0001217.1_g000020 Rmu_sc0001353.1_g000001 Rmu_sc0001353.1_g000030 Rmu_sc0002281.1_g000004 Rmu_sc0002281.1_g000021 Rmu_sc0002670.1_g000004 Rmu_sc0002782.1_g000013 Rmu_sc0002915.1_g000015 Rmu_sc0003032.1_g000026 Rmu_sc0004042.1_g000001 Rmu_sc0004192.1_g000012 Rmu_sc0004192.1_g000022 Rmu_sc0004391.1_g000015 Rmu_sc0004507.1_g000042 Rmu_sc0004507.1_g000044 Rmu_sc0006021.1_g000024 Rmu_sc0006219.1_g000003 Rmu_sc0006435.1_g000010 Rmu_sc0007576.1_g000002 Rmu_sc0011334.1_g000013 Rmu_sc0024896.1_g000001 Rmu_ssc0000062.1_g000038 Rmu_ssc0000410.1_g000031
rosa_roxburghii Rroxscaffold_175G00432520 Rroxscaffold_1G00016230 Rroxscaffold_1G00040400 Rroxscaffold_1G00042840 Rroxscaffold_1G00042960 Rroxscaffold_1G00043940 Rroxscaffold_1G00044030 Rroxscaffold_2G00123010 Rroxscaffold_2G00123030 Rroxscaffold_2G00123040 Rroxscaffold_3G00231080 Rroxscaffold_3G00235280 Rroxscaffold_3G00246840 Rroxscaffold_3G00246850 Rroxscaffold_4G00303170 Rroxscaffold_4G00317190 Rroxscaffold_4G00323790 Rroxscaffold_4G00323810 Rroxscaffold_4G00323850 Rroxscaffold_4G00324000 Rroxscaffold_6G00407090 Rroxscaffold_6G00407140 Rroxscaffold_6G00407170 Rroxscaffold_6G00407190 Rroxscaffold_6G00407540 Rroxscaffold_7G00197730 Rroxscaffold_7G00197820 Rroxscaffold_7G00202480 Rroxscaffold_7G00215030
rosa_rugosa Rorug01G0058200 Rorug01G0058300 Rorug01G0058500 Rorug01G0060200 Rorug01G0225900 Rorug03G0137700 Rorug03G0137800 Rorug03G0137900 Rorug03G0138000 Rorug03G0138100 Rorug03G0140800 Rorug03G0141100 Rorug03G0141200 Rorug03G0245500 Rorug03G0295300 Rorug03G0295400 Rorug03G0295500 Rorug03G0295800 Rorug03G0296000 Rorug05G0158700 Rorug05G0158800 Rorug05G0158900 Rorug05G0159800 Rorug05G0159800 Rorug05G0170800 Rorug05G0170900 Rorug05G0170900 Rorug05G0211100 Rorug05G0211200 Rorug05G0246600 Rorug05G0328600 Rorug05G0367800 Rorug05G0518400 Rorug06G0018600 Rorug06G0055600 Rorug07G0250400 RorugMtG0003800.1 RorugMtG0003900.1 RorugMtG0004200.1
rosa_samantha Rh1AG007500 Rh1AG075300 Rh1AG075700 Rh1AG240100 Rh1BG060500 Rh1BG060600 Rh1BG061000 Rh1BG062200 Rh3BG217100 Rh3BG221000 Rh3BG221200 Rh3BG221600 Rh3BG222000 Rh3BG227500 Rh3DG212800 Rh3DG212900 Rh3DG216600 Rh3DG217100 Rh3DG217400 Rh5BG253400 Rh5BG261900 Rh5BG303800 Rh5BG399200 Rh5BG399300 Rh5BG399400 Rh5BG399600 Rh5BG405300 Rh5BG405400 Rh5BG441500 Rh5CG282400 Rh5CG285300 Rh5CG286100 Rh5CG290300 Rh5CG294000 Rh5CG331000 Rh5CG359600 Rh5CG423200 Rh5CG423300 Rh5CG423400 Rh5CG423700 Rh5CG429400 Rh5CG431900 Rh5CG464200 Rh5DG262000 Rh6AG030300 Rh6AG030500 Rh6AG030600 Rh6AG032900 Rh6AG140400 Rh6AG141200 Rh6AG270000 Rh6AG451900 Rh6CG137800 Rh6DG027700 Rh6DG124300 Rh6DG124700 Rh6DG166400 Rh6DG452500 Rh7BG383200 Rh7CG283600 Rh7CG421200 Rh7CG421400 Rh7CG421800
rosa_wichuraiana Rw0G002000 Rw0G009100 Rw0G012450 Rw0G015810 Rw1G005940 Rw1G006020 Rw1G006040 Rw1G006060 Rw1G013290 Rw3G017240 Rw3G017250 Rw3G017470 Rw3G017500 Rw3G017520 Rw5G022920 Rw5G023200 Rw5G023620 Rw5G023940 Rw5G024130 Rw5G024170 Rw5G027380 Rw5G027440 Rw5G036040 Rw5G036500 Rw5G036540 Rw5G036560 Rw5G037000 Rw5G037270 Rw5G040050 Rw6G002730 Rw6G012120 Rw6G012190 Rw6G014890 Rw6G017470 Rw6G039370 Rw7G022830 Rw7G033440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 387
AatII GACGTC 1 cut(s) 923
AccB7I CCANNNNNTGG 1 cut(s) 84
AccI GTMKAC 1 cut(s) 948
AccII CGCG 2 cut(s) 684, 1575
AciI CCGC 1 cut(s) 1555
AclWI GGATC 2 cut(s) 844, 857
AcsI RAATTY 2 cut(s) 288, 434
AcuI CTGAAG 1 cut(s) 1002
AcyI GRCGYC 1 cut(s) 920
AdeI CACNNNGTG 1 cut(s) 572
AfaI GTAC 2 cut(s) 462, 1211
AfiI CCNNNNNNNGG 5 cut(s) 61, 84, 121, 259, 1305
AflIII ACRYGT 3 cut(s) 663, 1402, 1663
AjnI CCWGG 4 cut(s) 114, 147, 463, 852
AluBI AGCT 9 cut(s) 23, 319, 477, 808, 986, 1154, 1271, 1630, 1646
AluI AGCT 9 cut(s) 23, 319, 477, 808, 986, 1154, 1271, 1630, 1646
Alw21I GWGCWC 2 cut(s) 975, 1632
AlwI GGATC 2 cut(s) 844, 857
AlwNI CAGNNNCTG 1 cut(s) 154
ApoI RAATTY 2 cut(s) 288, 434
AseI ATTAAT 1 cut(s) 1563
Asp700I GAANNNNTTC 2 cut(s) 447, 516
AspS9I GGNCC 1 cut(s) 145
AsuHPI GGTGA 5 cut(s) 437, 532, 1289, 1366, 1637
AsuII TTCGAA 1 cut(s) 593
AvaII GGWCC 1 cut(s) 145
BamHI GGATCC 1 cut(s) 849
BanII GRGCYC 1 cut(s) 1632
BbsI GAAGAC 1 cut(s) 519
Bbv12I GWGCWC 2 cut(s) 975, 1632
BbvCI CCTCAGC 1 cut(s) 1411
BccI CCATC 3 cut(s) 422, 756, 1598
BceAI ACGGC 1 cut(s) 967
BciT130I CCWGG 4 cut(s) 116, 149, 465, 854
BciVI GTATCC 1 cut(s) 787
BfaI CTAG 3 cut(s) 239, 647, 1550
BfmI CTRYAG 2 cut(s) 1066, 1218
BfuI GTATCC 1 cut(s) 787
Bme1390I CCNGG 4 cut(s) 116, 149, 465, 854
Bme18I GGWCC 1 cut(s) 145
BmgT120I GGNCC 1 cut(s) 145
BmiI GGNNCC 4 cut(s) 186, 851, 1178, 1339
BmrFI CCNGG 4 cut(s) 116, 149, 465, 854
BmsI GCATC 3 cut(s) 1071, 1122, 1454
BpiI GAAGAC 1 cut(s) 519
BplI GAGNNNNNCTC 2 cut(s) 1614, 1646
BpmI CTGGAG 3 cut(s) 27, 171, 1223
Bpu10I CCTNAGC 1 cut(s) 1411
Bpu14I TTCGAA 1 cut(s) 593
BpuEI CTTGAG 2 cut(s) 155, 1616
BsaHI GRCGYC 1 cut(s) 920
BsaJI CCNNGG 3 cut(s) 114, 641, 853
BsaXI ACNNNNNCTCC 4 cut(s) 25, 55, 1199, 1229
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 84, 121, 259, 1305
Bse1I ACTGG 4 cut(s) 14, 188, 972, 1488
BseBI CCWGG 4 cut(s) 116, 149, 465, 854
BseDI CCNNGG 3 cut(s) 114, 641, 853
BseGI GGATG 5 cut(s) 10, 268, 897, 1113, 1369
BseLI CCNNNNNNNGG 5 cut(s) 61, 84, 121, 259, 1305
BseMII CTCAG 3 cut(s) 464, 488, 1425
BseNI ACTGG 4 cut(s) 14, 188, 972, 1488
BseRI GAGGAG 2 cut(s) 184, 1220
BseYI CCCAGC 1 cut(s) 77
Bsh1236I CGCG 2 cut(s) 684, 1575
BsiHKAI GWGCWC 2 cut(s) 975, 1632
BslFI GGGAC 1 cut(s) 1413
BslI CCNNNNNNNGG 5 cut(s) 61, 84, 121, 259, 1305
BsmFI GGGAC 1 cut(s) 1413
BsmI GAATGC 2 cut(s) 1133, 1427
Bsp119I TTCGAA 1 cut(s) 593
Bsp1286I GDGCHC 2 cut(s) 975, 1632
Bsp143I GATC 2 cut(s) 849, 1015
BspACI CCGC 1 cut(s) 1555
BspCNI CTCAG 3 cut(s) 465, 489, 1424
BspFNI CGCG 2 cut(s) 684, 1575
BspLI GGNNCC 4 cut(s) 186, 851, 1178, 1339
BspPI GGATC 2 cut(s) 844, 857
BspT104I TTCGAA 1 cut(s) 593
BsrI ACTGG 4 cut(s) 14, 188, 972, 1488
BssECI CCNNGG 3 cut(s) 114, 641, 853
BssMI GATC 2 cut(s) 849, 1015
BssNI GRCGYC 1 cut(s) 920
BssT1I CCWWGG 1 cut(s) 641
Bst2UI CCWGG 4 cut(s) 116, 149, 465, 854
Bst4CI ACNGT 3 cut(s) 37, 1056, 1070
BstACI GRCGYC 1 cut(s) 920
BstBI TTCGAA 1 cut(s) 593
BstC8I GCNNGC 2 cut(s) 1573, 1671
BstDEI CTNAG 5 cut(s) 473, 497, 899, 1323, 1411
BstEII GGTNACC 1 cut(s) 1372
BstF5I GGATG 5 cut(s) 10, 268, 897, 1113, 1369
BstFNI CGCG 2 cut(s) 684, 1575
BstKTI GATC 2 cut(s) 852, 1018
BstMBI GATC 2 cut(s) 849, 1015
BstMWI GCNNNNNNNGC 3 cut(s) 87, 376, 1130
BstNI CCWGG 4 cut(s) 116, 149, 465, 854
BstNSI RCATGY 4 cut(s) 611, 667, 1406, 1667
BstPI GGTNACC 1 cut(s) 1372
BstSCI CCNGG 4 cut(s) 114, 147, 463, 852
BstSFI CTRYAG 2 cut(s) 1066, 1218
BstUI CGCG 2 cut(s) 684, 1575
BstV2I GAAGAC 1 cut(s) 519
BstX2I RGATCY 1 cut(s) 849
BstXI CCANNNNNNTGG 1 cut(s) 1360
BstYI RGATCY 1 cut(s) 849
BsuI GTATCC 1 cut(s) 787
BtsCI GGATG 5 cut(s) 10, 268, 897, 1113, 1369
BtsI GCAGTG 1 cut(s) 1422
BtsIMutI CAGTG 3 cut(s) 195, 1075, 1422
Cac8I GCNNGC 2 cut(s) 1573, 1671
CaiI CAGNNNCTG 1 cut(s) 154
Cfr13I GGNCC 1 cut(s) 145
CseI GACGC 3 cut(s) 66, 184, 224
Csp6I GTAC 2 cut(s) 461, 1210
CspCI CAANNNNNGTGG 2 cut(s) 535, 570
CviQI GTAC 2 cut(s) 461, 1210
DdeI CTNAG 5 cut(s) 473, 497, 899, 1323, 1411
DpnI GATC 2 cut(s) 851, 1017
DpnII GATC 2 cut(s) 849, 1015
DraIII CACNNNGTG 1 cut(s) 572
Ecl136II GAGCTC 1 cut(s) 1630
Eco130I CCWWGG 1 cut(s) 641
Eco24I GRGCYC 1 cut(s) 1632
Eco32I GATATC 2 cut(s) 1003, 1282
Eco47I GGWCC 1 cut(s) 145
Eco53kI GAGCTC 1 cut(s) 1630
Eco57I CTGAAG 1 cut(s) 1002
Eco91I GGTNACC 1 cut(s) 1372
EcoICRI GAGCTC 1 cut(s) 1630
EcoO65I GGTNACC 1 cut(s) 1372
EcoRII CCWGG 4 cut(s) 114, 147, 463, 852
EcoRV GATATC 2 cut(s) 1003, 1282
EcoT14I CCWWGG 1 cut(s) 641
EcoT38I GRGCYC 1 cut(s) 1632
ErhI CCWWGG 1 cut(s) 641
FalI AAGNNNNNCTT 6 cut(s) 504, 536, 710, 742, 1071, 1103
FaqI GGGAC 1 cut(s) 1413
FblI GTMKAC 1 cut(s) 948
FokI GGATG 4 cut(s) 275, 904, 1100, 1376
FriOI GRGCYC 1 cut(s) 1632
FspBI CTAG 3 cut(s) 239, 647, 1550
GsaI CCCAGC 1 cut(s) 81
GsuI CTGGAG 3 cut(s) 27, 171, 1223
HgaI GACGC 3 cut(s) 66, 184, 224
Hin1I GRCGYC 1 cut(s) 920
HincII GTYRAC 1 cut(s) 52
HindII GTYRAC 1 cut(s) 52
HinfI GANTC 8 cut(s) 40, 125, 268, 557, 686, 858, 1198, 1356
HpaI GTTAAC 1 cut(s) 52
HphI GGTGA 5 cut(s) 437, 532, 1289, 1366, 1637
Hpy166II GTNNAC 3 cut(s) 52, 862, 949
Hpy188I TCNGA 2 cut(s) 498, 1450
Hpy188III TCNNGA 9 cut(s) 44, 521, 554, 628, 677, 847, 1049, 1202, 1353
Hpy8I GTNNAC 3 cut(s) 52, 862, 949
Hpy99I CGWCG 1 cut(s) 60
HpyAV CCTTC 6 cut(s) 547, 625, 778, 894, 1309, 1505
HpyCH4III ACNGT 3 cut(s) 37, 1056, 1070
HpyCH4IV ACGT 2 cut(s) 310, 920
HpyF10VI GCNNNNNNNGC 3 cut(s) 87, 376, 1130
HpyF3I CTNAG 5 cut(s) 473, 497, 899, 1323, 1411
HpySE526I ACGT 2 cut(s) 310, 920
Hsp92I GRCGYC 1 cut(s) 920
KspAI GTTAAC 1 cut(s) 52
Kzo9I GATC 2 cut(s) 849, 1015
LmnI GCTCC 2 cut(s) 190, 283
LweI GCATC 3 cut(s) 1071, 1122, 1454
MaeI CTAG 3 cut(s) 239, 647, 1550
MaeII ACGT 2 cut(s) 310, 920
MaeIII GTNAC 8 cut(s) 37, 601, 687, 1228, 1285, 1316, 1372, 1499
MalI GATC 2 cut(s) 851, 1017
MboI GATC 2 cut(s) 849, 1015
MboII GAAGA 8 cut(s) 102, 173, 524, 974, 1091, 1463, 1466, 1613
MfeI CAATTG 1 cut(s) 1303
MflI RGATCY 1 cut(s) 849
MhlI GDGCHC 2 cut(s) 975, 1632
MluCI AATT 9 cut(s) 209, 288, 434, 758, 768, 927, 1074, 1103, 1303
MlyI GAGTC 5 cut(s) 34, 119, 695, 867, 1192
MmeI TCCRAC 2 cut(s) 702, 771
MroXI GAANNNNTTC 2 cut(s) 447, 516
MseI TTAA 6 cut(s) 51, 417, 438, 578, 761, 1563
MspR9I CCNGG 4 cut(s) 116, 149, 465, 854
MunI CAATTG 1 cut(s) 1303
Mva1269I GAATGC 2 cut(s) 1133, 1427
MvaI CCWGG 4 cut(s) 116, 149, 465, 854
MvnI CGCG 2 cut(s) 684, 1575
MwoI GCNNNNNNNGC 3 cut(s) 87, 376, 1130
NdeII GATC 2 cut(s) 849, 1015
NlaIV GGNNCC 4 cut(s) 186, 851, 1178, 1339
NmeAIII GCCGAG 1 cut(s) 41
NmuCI GTSAC 6 cut(s) 37, 687, 1228, 1316, 1372, 1499
NspI RCATGY 4 cut(s) 611, 667, 1406, 1667
NspV TTCGAA 1 cut(s) 593
PciI ACATGT 3 cut(s) 663, 1402, 1663
PcsI WCGNNNNNNNCGW 1 cut(s) 370
PctI GAATGC 2 cut(s) 1133, 1427
PdmI GAANNNNTTC 2 cut(s) 447, 516
PfeI GAWTC 3 cut(s) 268, 557, 1356
PflFI GACNNNGTC 1 cut(s) 1370
PflMI CCANNNNNTGG 1 cut(s) 84
PfoI TCCNGGA 1 cut(s) 147
PleI GAGTC 5 cut(s) 34, 119, 694, 866, 1192
PpsI GAGTC 5 cut(s) 34, 119, 694, 866, 1192
PscI ACATGT 3 cut(s) 663, 1402, 1663
PshBI ATTAAT 1 cut(s) 1563
PsiI TTATAA 1 cut(s) 387
Psp124BI GAGCTC 1 cut(s) 1632
Psp6I CCWGG 4 cut(s) 114, 147, 463, 852
PspEI GGTNACC 1 cut(s) 1372
PspFI CCCAGC 1 cut(s) 77
PspGI CCWGG 4 cut(s) 114, 147, 463, 852
PspN4I GGNNCC 4 cut(s) 186, 851, 1178, 1339
PspPI GGNCC 1 cut(s) 145
PstNI CAGNNNCTG 1 cut(s) 154
PsuI RGATCY 1 cut(s) 849
PsyI GACNNNGTC 1 cut(s) 1370
RsaI GTAC 2 cut(s) 462, 1211
RsaNI GTAC 2 cut(s) 461, 1210
SacI GAGCTC 1 cut(s) 1632
SaqAI TTAA 6 cut(s) 51, 417, 438, 578, 761, 1563
Sau3AI GATC 2 cut(s) 849, 1015
Sau96I GGNCC 1 cut(s) 145
SchI GAGTC 5 cut(s) 34, 119, 695, 867, 1192
ScrFI CCNGG 4 cut(s) 116, 149, 465, 854
SduI GDGCHC 2 cut(s) 975, 1632
SfaNI GCATC 3 cut(s) 1071, 1122, 1454
SfcI CTRYAG 2 cut(s) 1066, 1218
SfuI TTCGAA 1 cut(s) 593
SinI GGWCC 1 cut(s) 145
SmlI CTYRAG 2 cut(s) 134, 1631
SmoI CTYRAG 2 cut(s) 134, 1631
Sse9I AATT 9 cut(s) 209, 288, 434, 758, 768, 927, 1074, 1103, 1303
SsiI CCGC 1 cut(s) 1555
SspI AATATT 2 cut(s) 391, 878
SspMI CTAG 3 cut(s) 239, 647, 1550
SstI GAGCTC 1 cut(s) 1632
StyD4I CCNGG 4 cut(s) 114, 147, 463, 852
StyI CCWWGG 1 cut(s) 641
TaaI ACNGT 3 cut(s) 37, 1056, 1070
TaiI ACGT 2 cut(s) 313, 923
TaqI TCGA 3 cut(s) 364, 373, 593
TasI AATT 9 cut(s) 209, 288, 434, 758, 768, 927, 1074, 1103, 1303
TatI WGTACW 1 cut(s) 1209
TfiI GAWTC 3 cut(s) 268, 557, 1356
Tru1I TTAA 6 cut(s) 51, 417, 438, 578, 761, 1563
Tru9I TTAA 6 cut(s) 51, 417, 438, 578, 761, 1563
TscAI CASTG 3 cut(s) 195, 1075, 1422
TseFI GTSAC 6 cut(s) 37, 687, 1228, 1316, 1372, 1499
Tsp45I GTSAC 6 cut(s) 37, 687, 1228, 1316, 1372, 1499
TspDTI ATGAA 9 cut(s) 208, 260, 281, 321, 384, 498, 1049, 1348, 1520
TspGWI ACGGA 2 cut(s) 347, 913
TspRI CASTG 3 cut(s) 195, 1075, 1422
Tth111I GACNNNGTC 1 cut(s) 1370
Van91I CCANNNNNTGG 1 cut(s) 84
VpaK11BI GGWCC 1 cut(s) 145
VspI ATTAAT 1 cut(s) 1563
XapI RAATTY 2 cut(s) 288, 434
XceI RCATGY 4 cut(s) 611, 667, 1406, 1667
XmiI GTMKAC 1 cut(s) 948
XmnI GAANNNNTTC 2 cut(s) 447, 516
XspI CTAG 3 cut(s) 239, 647, 1550
ZraI GACGTC 1 cut(s) 921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.